Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0019120 | XP_003589907.1 | 96.610 | 118 | 4 | 0 | 1 | 118 | 464 | 581 | 8.72e-72 | 234 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0019120 | sp|Q6F3A6|CDPKA_ORYSJ | 74.167 | 120 | 29 | 1 | 1 | 118 | 479 | 598 | 1.80e-55 | 184 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0019120 | G7I2I2 | 96.610 | 118 | 4 | 0 | 1 | 118 | 464 | 581 | 4.16e-72 | 234 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0019120 | Msa0070430 | 0.803669 | 3.121583e-49 | -8.615850e-47 |
| Msa0019120 | Msa0077880 | 0.800402 | 1.465476e-48 | -8.615850e-47 |
| Msa0019120 | Msa0100800 | 0.816815 | 4.553353e-52 | -8.615850e-47 |
| Msa0019120 | Msa0108870 | 0.833959 | 3.950844e-56 | -8.615850e-47 |
| Msa0019120 | Msa0131450 | 0.801007 | 1.102941e-48 | -8.615850e-47 |
| Msa0019120 | Msa0198520 | 0.812665 | 3.781689e-51 | -8.615850e-47 |
| Msa0019120 | Msa0198530 | 0.816659 | 4.933727e-52 | -8.615850e-47 |
| Msa0019120 | Msa0392200 | 0.801417 | 9.092278e-49 | -8.615850e-47 |
| Msa0019120 | Msa0439890 | 0.801279 | 9.706479e-49 | -8.615850e-47 |
| Msa0019120 | Msa0461590 | 0.800631 | 1.316294e-48 | -8.615850e-47 |
| Msa0019120 | Msa0640500 | 0.800181 | 1.626041e-48 | -8.615850e-47 |
| Msa0019120 | Msa0744090 | 0.817629 | 2.985933e-52 | -8.615850e-47 |
| Msa0019120 | Msa0825270 | 0.802674 | 5.016220e-49 | -8.615850e-47 |
| Msa0019120 | Msa0825280 | 0.815897 | 7.303739e-52 | -8.615850e-47 |
| Msa0019120 | Msa0851470 | 0.812444 | 4.226728e-51 | -8.615850e-47 |
| Msa0019120 | Msa0895310 | 0.801138 | 1.037135e-48 | -8.615850e-47 |
| Msa0019120 | Msa1087510 | -0.804944 | 1.693567e-49 | -8.615850e-47 |
| Msa0019120 | Msa1114040 | 0.801382 | 9.246284e-49 | -8.615850e-47 |
| Msa0019120 | Msa1211050 | -0.808268 | 3.366240e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0019120 | MtrunA17_Chr1g0170281 | 96.610 | 118 | 4 | 0 | 1 | 118 | 464 | 581 | 8.02e-76 | 234 |
| Msa0019120 | MtrunA17_Chr1g0176751 | 71.186 | 118 | 31 | 2 | 1 | 116 | 470 | 586 | 2.92e-51 | 170 |
| Msa0019120 | MtrunA17_Chr5g0448721 | 66.957 | 115 | 37 | 1 | 1 | 115 | 442 | 555 | 1.15e-47 | 160 |
| Msa0019120 | MtrunA17_Chr7g0267751 | 69.159 | 107 | 27 | 1 | 1 | 107 | 481 | 581 | 1.76e-45 | 154 |
| Msa0019120 | MtrunA17_Chr8g0385341 | 62.162 | 111 | 41 | 1 | 1 | 111 | 376 | 485 | 4.32e-43 | 147 |
| Msa0019120 | MtrunA17_Chr1g0200601 | 68.317 | 101 | 32 | 0 | 1 | 101 | 376 | 476 | 1.07e-42 | 145 |
| Msa0019120 | MtrunA17_Chr3g0131181 | 60.345 | 116 | 43 | 2 | 1 | 116 | 375 | 487 | 5.81e-42 | 144 |
| Msa0019120 | MtrunA17_Chr1g0176421 | 53.676 | 136 | 28 | 2 | 1 | 104 | 507 | 639 | 2.97e-38 | 135 |
| Msa0019120 | MtrunA17_Chr5g0397101 | 58.252 | 103 | 42 | 1 | 1 | 102 | 412 | 514 | 1.73e-34 | 124 |
| Msa0019120 | MtrunA17_Chr0c02g0489761 | 61.458 | 96 | 36 | 1 | 1 | 95 | 424 | 519 | 4.86e-34 | 123 |
| Msa0019120 | MtrunA17_Chr5g0441691 | 59.375 | 96 | 38 | 1 | 1 | 95 | 414 | 509 | 8.52e-33 | 119 |
| Msa0019120 | MtrunA17_Chr8g0387671 | 59.375 | 96 | 38 | 1 | 1 | 95 | 412 | 507 | 8.70e-33 | 119 |
| Msa0019120 | MtrunA17_Chr1g0157131 | 58.763 | 97 | 39 | 1 | 1 | 96 | 420 | 516 | 2.20e-31 | 115 |
| Msa0019120 | MtrunA17_Chr4g0074811 | 55.446 | 101 | 43 | 2 | 1 | 100 | 437 | 536 | 6.55e-31 | 114 |
| Msa0019120 | MtrunA17_Chr5g0444171 | 56.842 | 95 | 40 | 1 | 1 | 94 | 438 | 532 | 9.63e-31 | 114 |
| Msa0019120 | MtrunA17_Chr3g0098951 | 52.427 | 103 | 41 | 1 | 1 | 95 | 429 | 531 | 2.71e-29 | 110 |
| Msa0019120 | MtrunA17_Chr4g0074791 | 52.632 | 95 | 44 | 1 | 1 | 94 | 431 | 525 | 1.17e-27 | 105 |
| Msa0019120 | MtrunA17_Chr5g0441781 | 54.878 | 82 | 36 | 1 | 22 | 102 | 1 | 82 | 7.20e-26 | 92.8 |
| Msa0019120 | MtrunA17_Chr4g0059951 | 50.515 | 97 | 46 | 2 | 1 | 95 | 419 | 515 | 3.31e-24 | 95.9 |
| Msa0019120 | MtrunA17_Chr7g0242561 | 48.454 | 97 | 48 | 1 | 1 | 95 | 402 | 498 | 1.60e-23 | 94.0 |
| Msa0019120 | MtrunA17_Chr1g0173541 | 47.000 | 100 | 45 | 3 | 1 | 95 | 398 | 494 | 4.94e-20 | 84.0 |
| Msa0019120 | MtrunA17_Chr7g0257751 | 42.268 | 97 | 54 | 2 | 1 | 95 | 404 | 500 | 3.38e-18 | 79.0 |
| Msa0019120 | MtrunA17_Chr4g0033371 | 41.053 | 95 | 55 | 1 | 1 | 94 | 418 | 512 | 3.15e-17 | 75.9 |
| Msa0019120 | MtrunA17_Chr5g0405421 | 34.314 | 102 | 57 | 2 | 1 | 96 | 448 | 545 | 5.71e-12 | 60.8 |
| Msa0019120 | MtrunA17_Chr1g0188171 | 38.462 | 91 | 53 | 2 | 4 | 91 | 56 | 146 | 2.07e-11 | 57.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0019120 | AT5G04870.1 | 73.276 | 116 | 26 | 2 | 1 | 113 | 496 | 609 | 2.89e-53 | 176 |
| Msa0019120 | AT3G10660.2 | 72.174 | 115 | 29 | 2 | 1 | 113 | 532 | 645 | 5.23e-48 | 162 |
| Msa0019120 | AT3G10660.1 | 72.174 | 115 | 29 | 2 | 1 | 113 | 532 | 645 | 5.23e-48 | 162 |
| Msa0019120 | AT2G17290.1 | 66.087 | 115 | 38 | 1 | 1 | 115 | 431 | 544 | 3.19e-46 | 156 |
| Msa0019120 | AT2G17290.2 | 66.087 | 115 | 38 | 1 | 1 | 115 | 431 | 544 | 3.19e-46 | 156 |
| Msa0019120 | AT4G38230.1 | 66.667 | 111 | 35 | 1 | 1 | 111 | 226 | 334 | 6.13e-45 | 149 |
| Msa0019120 | AT4G35310.2 | 65.217 | 115 | 39 | 1 | 1 | 115 | 443 | 556 | 2.44e-44 | 151 |
| Msa0019120 | AT4G35310.1 | 65.217 | 115 | 39 | 1 | 1 | 115 | 443 | 556 | 2.44e-44 | 151 |
| Msa0019120 | AT4G38230.4 | 66.667 | 111 | 35 | 1 | 1 | 111 | 370 | 478 | 6.51e-44 | 149 |
| Msa0019120 | AT4G38230.3 | 66.667 | 111 | 35 | 1 | 1 | 111 | 370 | 478 | 6.51e-44 | 149 |
| Msa0019120 | AT4G38230.2 | 66.667 | 111 | 35 | 1 | 1 | 111 | 400 | 508 | 8.45e-44 | 149 |
| Msa0019120 | AT2G38910.1 | 67.619 | 105 | 31 | 1 | 1 | 105 | 480 | 581 | 2.76e-43 | 149 |
| Msa0019120 | AT4G09570.1 | 63.248 | 117 | 40 | 2 | 1 | 116 | 371 | 485 | 6.92e-43 | 147 |
| Msa0019120 | AT1G35670.1 | 71.579 | 95 | 27 | 0 | 1 | 95 | 372 | 466 | 1.08e-41 | 143 |
| Msa0019120 | AT5G23580.1 | 72.043 | 93 | 26 | 0 | 1 | 93 | 368 | 460 | 4.94e-40 | 139 |
| Msa0019120 | AT5G12180.1 | 61.468 | 109 | 41 | 1 | 1 | 108 | 419 | 527 | 5.69e-39 | 137 |
| Msa0019120 | AT5G19360.1 | 61.468 | 109 | 41 | 1 | 1 | 108 | 414 | 522 | 6.97e-38 | 134 |
| Msa0019120 | AT4G21940.2 | 55.340 | 103 | 44 | 2 | 1 | 101 | 447 | 549 | 3.38e-31 | 115 |
| Msa0019120 | AT4G21940.1 | 55.340 | 103 | 44 | 2 | 1 | 101 | 447 | 549 | 3.62e-31 | 115 |
| Msa0019120 | AT1G76040.1 | 54.167 | 96 | 43 | 1 | 1 | 95 | 219 | 314 | 5.76e-31 | 112 |
| Msa0019120 | AT1G76040.4 | 54.167 | 96 | 43 | 1 | 1 | 95 | 219 | 314 | 5.76e-31 | 112 |
| Msa0019120 | AT4G23650.1 | 53.398 | 103 | 47 | 1 | 1 | 102 | 424 | 526 | 7.60e-31 | 114 |
| Msa0019120 | AT4G04720.2 | 52.941 | 102 | 47 | 1 | 1 | 101 | 425 | 526 | 2.94e-30 | 113 |
| Msa0019120 | AT4G04720.1 | 52.941 | 102 | 47 | 1 | 1 | 101 | 425 | 526 | 2.94e-30 | 113 |
| Msa0019120 | AT1G76040.2 | 54.167 | 96 | 43 | 1 | 1 | 95 | 457 | 552 | 8.09e-30 | 112 |
| Msa0019120 | AT4G04710.3 | 53.922 | 102 | 46 | 1 | 1 | 101 | 364 | 465 | 1.17e-29 | 110 |
| Msa0019120 | AT4G04710.2 | 53.922 | 102 | 46 | 1 | 1 | 101 | 378 | 479 | 1.22e-29 | 111 |
| Msa0019120 | AT4G04710.1 | 53.922 | 102 | 46 | 1 | 1 | 101 | 391 | 492 | 1.37e-29 | 110 |
| Msa0019120 | AT1G50700.1 | 53.125 | 96 | 44 | 1 | 1 | 95 | 419 | 514 | 1.85e-28 | 108 |
| Msa0019120 | AT4G04710.4 | 53.000 | 100 | 46 | 1 | 3 | 101 | 395 | 494 | 3.60e-28 | 107 |
| Msa0019120 | AT3G20410.2 | 52.083 | 96 | 45 | 1 | 1 | 95 | 437 | 532 | 1.31e-27 | 105 |
| Msa0019120 | AT3G20410.1 | 52.083 | 96 | 45 | 1 | 1 | 95 | 437 | 532 | 1.31e-27 | 105 |
| Msa0019120 | AT1G50700.2 | 52.688 | 93 | 43 | 1 | 4 | 95 | 448 | 540 | 3.01e-27 | 104 |
| Msa0019120 | AT4G04695.1 | 51.042 | 96 | 46 | 1 | 1 | 95 | 377 | 472 | 7.76e-27 | 103 |
| Msa0019120 | AT4G04740.4 | 46.602 | 103 | 54 | 1 | 1 | 102 | 414 | 516 | 2.40e-25 | 99.4 |
| Msa0019120 | AT4G04740.6 | 46.602 | 103 | 54 | 1 | 1 | 102 | 414 | 516 | 2.40e-25 | 99.4 |
| Msa0019120 | AT4G04740.5 | 46.602 | 103 | 54 | 1 | 1 | 102 | 414 | 516 | 2.40e-25 | 99.4 |
| Msa0019120 | AT4G04740.3 | 46.602 | 103 | 54 | 1 | 1 | 102 | 414 | 516 | 2.40e-25 | 99.4 |
| Msa0019120 | AT4G04740.1 | 46.602 | 103 | 54 | 1 | 1 | 102 | 414 | 516 | 2.40e-25 | 99.4 |
| Msa0019120 | AT4G04740.7 | 46.602 | 103 | 54 | 1 | 1 | 102 | 414 | 516 | 2.40e-25 | 99.4 |
| Msa0019120 | AT1G61950.1 | 50.538 | 93 | 45 | 1 | 1 | 92 | 445 | 537 | 1.39e-24 | 97.4 |
| Msa0019120 | AT1G74740.1 | 48.454 | 97 | 48 | 2 | 1 | 95 | 405 | 501 | 3.85e-24 | 95.9 |
| Msa0019120 | AT3G51850.1 | 50.515 | 97 | 46 | 1 | 1 | 95 | 400 | 496 | 6.51e-24 | 95.5 |
| Msa0019120 | AT1G18890.1 | 49.485 | 97 | 47 | 2 | 1 | 95 | 409 | 505 | 5.20e-23 | 92.8 |
| Msa0019120 | AT4G04700.1 | 49.462 | 93 | 46 | 1 | 1 | 92 | 377 | 469 | 4.03e-22 | 90.1 |
| Msa0019120 | AT5G19450.2 | 48.000 | 100 | 44 | 3 | 1 | 95 | 404 | 500 | 1.10e-21 | 89.0 |
| Msa0019120 | AT5G19450.1 | 48.000 | 100 | 44 | 3 | 1 | 95 | 404 | 500 | 1.10e-21 | 89.0 |
| Msa0019120 | AT3G57530.1 | 44.792 | 96 | 52 | 1 | 1 | 95 | 409 | 504 | 1.79e-20 | 85.5 |
| Msa0019120 | AT5G12480.2 | 44.000 | 100 | 49 | 3 | 1 | 95 | 311 | 408 | 1.43e-19 | 82.8 |
| Msa0019120 | AT5G12480.1 | 44.000 | 100 | 49 | 3 | 1 | 95 | 405 | 502 | 1.80e-19 | 82.8 |
| Msa0019120 | AT4G04740.2 | 46.835 | 79 | 41 | 1 | 1 | 78 | 414 | 492 | 1.01e-18 | 80.9 |
| Msa0019120 | AT2G41860.2 | 42.268 | 97 | 54 | 1 | 1 | 95 | 400 | 496 | 4.90e-17 | 75.9 |
| Msa0019120 | AT2G41860.1 | 42.268 | 97 | 54 | 1 | 1 | 95 | 400 | 496 | 5.05e-17 | 75.9 |
| Msa0019120 | AT3G51850.2 | 48.101 | 79 | 39 | 1 | 1 | 77 | 400 | 478 | 2.13e-16 | 73.9 |
| Msa0019120 | AT2G31500.1 | 37.903 | 124 | 67 | 5 | 1 | 114 | 412 | 535 | 4.16e-15 | 70.5 |
| Msa0019120 | AT2G17890.1 | 38.235 | 102 | 53 | 3 | 1 | 96 | 457 | 554 | 6.06e-15 | 70.1 |
| Msa0019120 | AT1G76040.3 | 60.417 | 48 | 19 | 0 | 1 | 48 | 457 | 504 | 3.26e-14 | 67.8 |
| Msa0019120 | AT4G36070.1 | 38.235 | 102 | 53 | 3 | 1 | 96 | 420 | 517 | 6.30e-14 | 67.0 |
| Msa0019120 | AT4G36070.2 | 38.235 | 102 | 53 | 3 | 1 | 96 | 420 | 517 | 6.34e-14 | 67.0 |
| Msa0019120 | AT4G21940.3 | 63.043 | 46 | 17 | 0 | 1 | 46 | 447 | 492 | 1.21e-13 | 66.2 |
| Msa0019120 | AT3G59440.1 | 35.000 | 100 | 61 | 1 | 1 | 96 | 92 | 191 | 2.21e-13 | 63.5 |
| Msa0019120 | AT1G50700.3 | 56.522 | 46 | 20 | 0 | 1 | 46 | 419 | 464 | 2.40e-11 | 59.7 |
| Msa0019120 | AT4G14640.2 | 38.889 | 90 | 52 | 2 | 5 | 91 | 40 | 129 | 4.40e-11 | 56.6 |
| Msa0019120 | AT1G66410.4 | 37.363 | 91 | 54 | 2 | 4 | 91 | 20 | 110 | 7.77e-11 | 55.5 |
| Msa0019120 | AT1G66410.3 | 37.363 | 91 | 54 | 2 | 4 | 91 | 20 | 110 | 7.77e-11 | 55.5 |
| Msa0019120 | AT5G37780.4 | 37.363 | 91 | 54 | 2 | 4 | 91 | 43 | 133 | 8.11e-11 | 55.8 |
| Msa0019120 | AT2G27030.3 | 34.906 | 106 | 63 | 3 | 4 | 103 | 56 | 161 | 8.23e-11 | 56.6 |
| Msa0019120 | AT4G14640.1 | 38.889 | 90 | 52 | 2 | 5 | 91 | 58 | 147 | 9.92e-11 | 55.8 |
Find 18 sgRNAs with CRISPR-Local
Find 246 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACAGTGGGACAATTGATTA+TGG | 0.379412 | 1_1:-33155079 | Msa0019120:CDS |
| CAACAAGCTAGCGACGAGTT+TGG | 0.391094 | 1_1:-33154941 | Msa0019120:CDS |
| TAACTTCAGCATTCGTTTCA+AGG | 0.399330 | 1_1:-33153300 | Msa0019120:CDS |
| CTTCCCATGGTTGGTAAGAA+AGG | 0.417517 | 1_1:-33153332 | Msa0019120:CDS |
| ATCTTTATCAAAGTAAGAAA+AGG | 0.472805 | 1_1:+33154994 | None:intergenic |
| TGGCATTAAAGATGTTCGTT+TGG | 0.475471 | 1_1:-33154921 | Msa0019120:CDS |
| TAGACCTTTCTTACCAACCA+TGG | 0.528960 | 1_1:+33153328 | None:intergenic |
| TACTTTGATAAAGATGGAAG+TGG | 0.530734 | 1_1:-33154986 | Msa0019120:CDS |
| AGACCTTTCTTACCAACCAT+GGG | 0.555679 | 1_1:+33153329 | None:intergenic |
| AAAGGAAATCTTCCCATGGT+TGG | 0.564937 | 1_1:-33153341 | Msa0019120:CDS |
| AATTTATGATTGAATGCAAG+CGG | 0.582834 | 1_1:-33155230 | None:intergenic |
| CTTAACAAGATTGAAAGAGA+AGG | 0.605055 | 1_1:-33155031 | Msa0019120:CDS |
| TTTGCAGCAATGATGCAGAA+AGG | 0.617490 | 1_1:-33153359 | Msa0019120:CDS |
| AGGCTGATGTAGATAACAGT+GGG | 0.651767 | 1_1:-33155093 | Msa0019120:CDS |
| TGATTATGGTGAGTTCATTG+CGG | 0.658251 | 1_1:-33155065 | Msa0019120:CDS |
| GCAGAAAGGAAATCTTCCCA+TGG | 0.666252 | 1_1:-33153345 | Msa0019120:CDS |
| TAGGCTGATGTAGATAACAG+TGG | 0.668045 | 1_1:-33155094 | Msa0019120:CDS |
| CTTCAGCATTCGTTTCAAGG+AGG | 0.670111 | 1_1:-33153297 | Msa0019120:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATTCATATTACTTAAAT+AGG | + | chr1_1:33153995-33154014 | None:intergenic | 10.0% |
| !! | ATTATTCATATTACTTAAAT+AGG | + | chr1_1:33153995-33154014 | None:intergenic | 10.0% |
| !! | CTCTATTTAATAAAAAAGAT+TGG | + | chr1_1:33153886-33153905 | None:intergenic | 15.0% |
| !!! | TCTTTTTTATTAAATAGAGA+AGG | - | chr1_1:33153887-33153906 | Msa0019120:intron | 15.0% |
| !! | CTCTATTTAATAAAAAAGAT+TGG | + | chr1_1:33153886-33153905 | None:intergenic | 15.0% |
| !!! | TCTTTTTTATTAAATAGAGA+AGG | - | chr1_1:33153887-33153906 | Msa0019120:intron | 15.0% |
| !! | ATCTTTATCAAAGTAAGAAA+AGG | + | chr1_1:33153509-33153528 | None:intergenic | 20.0% |
| !!! | TTTTCTTACTTTGATAAAGA+TGG | - | chr1_1:33153508-33153527 | Msa0019120:intron | 20.0% |
| !!! | TTTAATAAAAAAGATTGGTC+TGG | + | chr1_1:33153881-33153900 | None:intergenic | 20.0% |
| !!! | TAAGATATAGACTTTTAAAC+AGG | - | chr1_1:33154279-33154298 | Msa0019120:intron | 20.0% |
| !!! | ATTTTTTTAAAGCCTAAGTT+TGG | + | chr1_1:33154376-33154395 | None:intergenic | 20.0% |
| !!! | ACTTAGGCTTTAAAAAAATA+TGG | - | chr1_1:33154377-33154396 | Msa0019120:intron | 20.0% |
| !! | ACAATTCTATTGAACTATAT+AGG | + | chr1_1:33154454-33154473 | None:intergenic | 20.0% |
| !! | CTGATATTCATTCAAATATA+TGG | - | chr1_1:33154555-33154574 | Msa0019120:intron | 20.0% |
| !! | ATGCTATAAACAATTGATTA+AGG | - | chr1_1:33154860-33154879 | Msa0019120:intron | 20.0% |
| !! | TGCTATAAACAATTGATTAA+GGG | - | chr1_1:33154861-33154880 | Msa0019120:intron | 20.0% |
| !! | ATCTTTATCAAAGTAAGAAA+AGG | + | chr1_1:33153509-33153528 | None:intergenic | 20.0% |
| !!! | TTTTCTTACTTTGATAAAGA+TGG | - | chr1_1:33153508-33153527 | Msa0019120:intron | 20.0% |
| !!! | TTTAATAAAAAAGATTGGTC+TGG | + | chr1_1:33153881-33153900 | None:intergenic | 20.0% |
| !!! | TAAGATATAGACTTTTAAAC+AGG | - | chr1_1:33154279-33154298 | Msa0019120:intron | 20.0% |
| !!! | ATTTTTTTAAAGCCTAAGTT+TGG | + | chr1_1:33154376-33154395 | None:intergenic | 20.0% |
| !!! | ACTTAGGCTTTAAAAAAATA+TGG | - | chr1_1:33154377-33154396 | Msa0019120:intron | 20.0% |
| !! | ACAATTCTATTGAACTATAT+AGG | + | chr1_1:33154454-33154473 | None:intergenic | 20.0% |
| !! | CTGATATTCATTCAAATATA+TGG | - | chr1_1:33154555-33154574 | Msa0019120:intron | 20.0% |
| !! | ATGCTATAAACAATTGATTA+AGG | - | chr1_1:33154860-33154879 | Msa0019120:intron | 20.0% |
| !! | TGCTATAAACAATTGATTAA+GGG | - | chr1_1:33154861-33154880 | Msa0019120:intron | 20.0% |
| ! | GTTAATGTGTTCTATTTAAC+AGG | - | chr1_1:33153343-33153362 | Msa0019120:CDS | 25.0% |
| ! | AACTACAAATATTGAAGAGA+AGG | + | chr1_1:33153668-33153687 | None:intergenic | 25.0% |
| ! | ACCATAATTATTTGAGAAAG+TGG | - | chr1_1:33153736-33153755 | Msa0019120:intron | 25.0% |
| ! | TCCACTTTCTCAAATAATTA+TGG | + | chr1_1:33153740-33153759 | None:intergenic | 25.0% |
| !! | TTAAGCCTATTTAGCTTAAA+AGG | - | chr1_1:33153923-33153942 | Msa0019120:intron | 25.0% |
| ! | TTCATATTACTTAAATAGGC+CGG | + | chr1_1:33153991-33154010 | None:intergenic | 25.0% |
| ! | TAATGAAGAACTTAGATGTA+AGG | + | chr1_1:33154506-33154525 | None:intergenic | 25.0% |
| ! | TCATTAATAGAAATTCATCG+TGG | - | chr1_1:33154520-33154539 | Msa0019120:intron | 25.0% |
| ! | GTTAAAATAATTACCAAGTG+AGG | - | chr1_1:33154583-33154602 | Msa0019120:intron | 25.0% |
| ! | ATCTACTAACATAAACTGTT+TGG | - | chr1_1:33154663-33154682 | Msa0019120:intron | 25.0% |
| ! | TCTACTAACATAAACTGTTT+GGG | - | chr1_1:33154664-33154683 | Msa0019120:intron | 25.0% |
| ! | ATTAAGGGTTTATCCAAATA+AGG | - | chr1_1:33154876-33154895 | Msa0019120:intron | 25.0% |
| ! | TTAAGGGTTTATCCAAATAA+GGG | - | chr1_1:33154877-33154896 | Msa0019120:intron | 25.0% |
| ! | TATCACTTACTTTATCTGAT+AGG | + | chr1_1:33154950-33154969 | None:intergenic | 25.0% |
| !! | TCTTTTACTGTTCATTACAA+TGG | + | chr1_1:33154982-33155001 | None:intergenic | 25.0% |
| ! | GTTAATGTGTTCTATTTAAC+AGG | - | chr1_1:33153343-33153362 | Msa0019120:CDS | 25.0% |
| ! | AACTACAAATATTGAAGAGA+AGG | + | chr1_1:33153668-33153687 | None:intergenic | 25.0% |
| ! | ACCATAATTATTTGAGAAAG+TGG | - | chr1_1:33153736-33153755 | Msa0019120:intron | 25.0% |
| ! | TCCACTTTCTCAAATAATTA+TGG | + | chr1_1:33153740-33153759 | None:intergenic | 25.0% |
| !! | TTAAGCCTATTTAGCTTAAA+AGG | - | chr1_1:33153923-33153942 | Msa0019120:intron | 25.0% |
| ! | TTCATATTACTTAAATAGGC+CGG | + | chr1_1:33153991-33154010 | None:intergenic | 25.0% |
| ! | TAATGAAGAACTTAGATGTA+AGG | + | chr1_1:33154506-33154525 | None:intergenic | 25.0% |
| ! | TCATTAATAGAAATTCATCG+TGG | - | chr1_1:33154520-33154539 | Msa0019120:intron | 25.0% |
| ! | GTTAAAATAATTACCAAGTG+AGG | - | chr1_1:33154583-33154602 | Msa0019120:intron | 25.0% |
| ! | ATCTACTAACATAAACTGTT+TGG | - | chr1_1:33154663-33154682 | Msa0019120:intron | 25.0% |
| ! | TCTACTAACATAAACTGTTT+GGG | - | chr1_1:33154664-33154683 | Msa0019120:intron | 25.0% |
| ! | ATTAAGGGTTTATCCAAATA+AGG | - | chr1_1:33154876-33154895 | Msa0019120:intron | 25.0% |
| ! | TTAAGGGTTTATCCAAATAA+GGG | - | chr1_1:33154877-33154896 | Msa0019120:intron | 25.0% |
| ! | TATCACTTACTTTATCTGAT+AGG | + | chr1_1:33154950-33154969 | None:intergenic | 25.0% |
| !! | TCTTTTACTGTTCATTACAA+TGG | + | chr1_1:33154982-33155001 | None:intergenic | 25.0% |
| AAGCGGTAAGTATCTTATAA+AGG | - | chr1_1:33153287-33153306 | Msa0019120:CDS | 30.0% | |
| TCACTATACCTTGAAATTGT+AGG | - | chr1_1:33153387-33153406 | Msa0019120:intron | 30.0% | |
| CTTAACAAGATTGAAAGAGA+AGG | - | chr1_1:33153469-33153488 | Msa0019120:intron | 30.0% | |
| TACTTTGATAAAGATGGAAG+TGG | - | chr1_1:33153514-33153533 | Msa0019120:intron | 30.0% | |
| ATCGATGAAGATAATGTAAG+TGG | - | chr1_1:33153619-33153638 | Msa0019120:intron | 30.0% | |
| AAAAGCCTCTTAAGCATATT+AGG | - | chr1_1:33153965-33153984 | Msa0019120:intron | 30.0% | |
| ! | ATAATCAACACGAGGTTTTA+GGG | + | chr1_1:33154177-33154196 | None:intergenic | 30.0% |
| CAATGTGATCCAAGTTTAAA+TGG | + | chr1_1:33154241-33154260 | None:intergenic | 30.0% | |
| !! | AGGCTTTAAAAAAATATGGC+AGG | - | chr1_1:33154381-33154400 | Msa0019120:intron | 30.0% |
| CTACTAACATAAACTGTTTG+GGG | - | chr1_1:33154665-33154684 | Msa0019120:intron | 30.0% | |
| TACTAACATAAACTGTTTGG+GGG | - | chr1_1:33154666-33154685 | Msa0019120:intron | 30.0% | |
| !!! | CTTATTTTTGTAAGCTCTCT+AGG | - | chr1_1:33154733-33154752 | Msa0019120:intron | 30.0% |
| ! | TAGTGGTTATAAGTGCTTTT+GGG | + | chr1_1:33154913-33154932 | None:intergenic | 30.0% |
| !! | AGCATCAGATTTTGAGTATA+AGG | + | chr1_1:33155048-33155067 | None:intergenic | 30.0% |
| AAGCGGTAAGTATCTTATAA+AGG | - | chr1_1:33153287-33153306 | Msa0019120:CDS | 30.0% | |
| TCACTATACCTTGAAATTGT+AGG | - | chr1_1:33153387-33153406 | Msa0019120:intron | 30.0% | |
| CTTAACAAGATTGAAAGAGA+AGG | - | chr1_1:33153469-33153488 | Msa0019120:intron | 30.0% | |
| TACTTTGATAAAGATGGAAG+TGG | - | chr1_1:33153514-33153533 | Msa0019120:intron | 30.0% | |
| ATCGATGAAGATAATGTAAG+TGG | - | chr1_1:33153619-33153638 | Msa0019120:intron | 30.0% | |
| AAAAGCCTCTTAAGCATATT+AGG | - | chr1_1:33153965-33153984 | Msa0019120:intron | 30.0% | |
| ! | ATAATCAACACGAGGTTTTA+GGG | + | chr1_1:33154177-33154196 | None:intergenic | 30.0% |
| CAATGTGATCCAAGTTTAAA+TGG | + | chr1_1:33154241-33154260 | None:intergenic | 30.0% | |
| !! | AGGCTTTAAAAAAATATGGC+AGG | - | chr1_1:33154381-33154400 | Msa0019120:intron | 30.0% |
| CTACTAACATAAACTGTTTG+GGG | - | chr1_1:33154665-33154684 | Msa0019120:intron | 30.0% | |
| TACTAACATAAACTGTTTGG+GGG | - | chr1_1:33154666-33154685 | Msa0019120:intron | 30.0% | |
| !!! | CTTATTTTTGTAAGCTCTCT+AGG | - | chr1_1:33154733-33154752 | Msa0019120:intron | 30.0% |
| ! | TAGTGGTTATAAGTGCTTTT+GGG | + | chr1_1:33154913-33154932 | None:intergenic | 30.0% |
| !! | AGCATCAGATTTTGAGTATA+AGG | + | chr1_1:33155048-33155067 | None:intergenic | 30.0% |
| GGACTCGTTATAAAGTAGAA+AGG | - | chr1_1:33153308-33153327 | Msa0019120:CDS | 35.0% | |
| TACATCAGCCTACAATTTCA+AGG | + | chr1_1:33153398-33153417 | None:intergenic | 35.0% | |
| AACAGTGGGACAATTGATTA+TGG | - | chr1_1:33153421-33153440 | Msa0019120:intron | 35.0% | |
| TGATTATGGTGAGTTCATTG+CGG | - | chr1_1:33153435-33153454 | Msa0019120:intron | 35.0% | |
| TGGCATTAAAGATGTTCGTT+TGG | - | chr1_1:33153579-33153598 | Msa0019120:intron | 35.0% | |
| TTGAACCTAACCACATGTAT+CGG | - | chr1_1:33153765-33153784 | Msa0019120:intron | 35.0% | |
| TGTCAGACAAAGACATTTGT+CGG | - | chr1_1:33153799-33153818 | Msa0019120:intron | 35.0% | |
| AACTCTTCAATTTGAAAGCG+TGG | + | chr1_1:33153832-33153851 | None:intergenic | 35.0% | |
| CGCTTTCAAATTGAAGAGTT+AGG | - | chr1_1:33153832-33153851 | Msa0019120:intron | 35.0% | |
| AAATTGAAGAGTTAGGCCTA+GGG | - | chr1_1:33153839-33153858 | Msa0019120:intron | 35.0% | |
| !! | TAAAAAAGATTGGTCTGGCT+TGG | + | chr1_1:33153876-33153895 | None:intergenic | 35.0% |
| ! | GATAATCAACACGAGGTTTT+AGG | + | chr1_1:33154178-33154197 | None:intergenic | 35.0% |
| TTCGCTAGTCCATTTAAACT+TGG | - | chr1_1:33154229-33154248 | Msa0019120:intron | 35.0% | |
| ! | AGACTTTTAAACAGGCTTGT+AGG | - | chr1_1:33154287-33154306 | Msa0019120:intron | 35.0% |
| !!! | CTATCATAGGCCTACTTTTT+AGG | + | chr1_1:33154345-33154364 | None:intergenic | 35.0% |
| CTAAAAAGTAGGCCTATGAT+AGG | - | chr1_1:33154343-33154362 | Msa0019120:intron | 35.0% | |
| GAACTATATAGGCCTAACTA+GGG | + | chr1_1:33154443-33154462 | None:intergenic | 35.0% | |
| TGAACTATATAGGCCTAACT+AGG | + | chr1_1:33154444-33154463 | None:intergenic | 35.0% | |
| TAGAAATTCATCGTGGTTGA+CGG | - | chr1_1:33154527-33154546 | Msa0019120:intron | 35.0% | |
| ! | AGTGGTTATAAGTGCTTTTG+GGG | + | chr1_1:33154912-33154931 | None:intergenic | 35.0% |
| ! | GTAGTGGTTATAAGTGCTTT+TGG | + | chr1_1:33154914-33154933 | None:intergenic | 35.0% |
| ACTTTATCTGATAGGCGATA+CGG | + | chr1_1:33154942-33154961 | None:intergenic | 35.0% | |
| TAACTTCAGCATTCGTTTCA+AGG | - | chr1_1:33155200-33155219 | Msa0019120:intron | 35.0% | |
| GGACTCGTTATAAAGTAGAA+AGG | - | chr1_1:33153308-33153327 | Msa0019120:CDS | 35.0% | |
| TACATCAGCCTACAATTTCA+AGG | + | chr1_1:33153398-33153417 | None:intergenic | 35.0% | |
| AACAGTGGGACAATTGATTA+TGG | - | chr1_1:33153421-33153440 | Msa0019120:intron | 35.0% | |
| TGATTATGGTGAGTTCATTG+CGG | - | chr1_1:33153435-33153454 | Msa0019120:intron | 35.0% | |
| TGGCATTAAAGATGTTCGTT+TGG | - | chr1_1:33153579-33153598 | Msa0019120:intron | 35.0% | |
| TTGAACCTAACCACATGTAT+CGG | - | chr1_1:33153765-33153784 | Msa0019120:intron | 35.0% | |
| TGTCAGACAAAGACATTTGT+CGG | - | chr1_1:33153799-33153818 | Msa0019120:intron | 35.0% | |
| AACTCTTCAATTTGAAAGCG+TGG | + | chr1_1:33153832-33153851 | None:intergenic | 35.0% | |
| CGCTTTCAAATTGAAGAGTT+AGG | - | chr1_1:33153832-33153851 | Msa0019120:intron | 35.0% | |
| AAATTGAAGAGTTAGGCCTA+GGG | - | chr1_1:33153839-33153858 | Msa0019120:intron | 35.0% | |
| !! | TAAAAAAGATTGGTCTGGCT+TGG | + | chr1_1:33153876-33153895 | None:intergenic | 35.0% |
| ! | GATAATCAACACGAGGTTTT+AGG | + | chr1_1:33154178-33154197 | None:intergenic | 35.0% |
| TTCGCTAGTCCATTTAAACT+TGG | - | chr1_1:33154229-33154248 | Msa0019120:intron | 35.0% | |
| ! | AGACTTTTAAACAGGCTTGT+AGG | - | chr1_1:33154287-33154306 | Msa0019120:intron | 35.0% |
| !!! | CTATCATAGGCCTACTTTTT+AGG | + | chr1_1:33154345-33154364 | None:intergenic | 35.0% |
| CTAAAAAGTAGGCCTATGAT+AGG | - | chr1_1:33154343-33154362 | Msa0019120:intron | 35.0% | |
| GAACTATATAGGCCTAACTA+GGG | + | chr1_1:33154443-33154462 | None:intergenic | 35.0% | |
| TGAACTATATAGGCCTAACT+AGG | + | chr1_1:33154444-33154463 | None:intergenic | 35.0% | |
| TAGAAATTCATCGTGGTTGA+CGG | - | chr1_1:33154527-33154546 | Msa0019120:intron | 35.0% | |
| ! | AGTGGTTATAAGTGCTTTTG+GGG | + | chr1_1:33154912-33154931 | None:intergenic | 35.0% |
| ! | GTAGTGGTTATAAGTGCTTT+TGG | + | chr1_1:33154914-33154933 | None:intergenic | 35.0% |
| ACTTTATCTGATAGGCGATA+CGG | + | chr1_1:33154942-33154961 | None:intergenic | 35.0% | |
| TAACTTCAGCATTCGTTTCA+AGG | - | chr1_1:33155200-33155219 | Msa0019120:intron | 35.0% | |
| TAGGCTGATGTAGATAACAG+TGG | - | chr1_1:33153406-33153425 | Msa0019120:intron | 40.0% | |
| AGGCTGATGTAGATAACAGT+GGG | - | chr1_1:33153407-33153426 | Msa0019120:intron | 40.0% | |
| ! | CTTCAATTTGAAAGCGTGGT+CGG | + | chr1_1:33153828-33153847 | None:intergenic | 40.0% |
| CAAATTGAAGAGTTAGGCCT+AGG | - | chr1_1:33153838-33153857 | Msa0019120:intron | 40.0% | |
| !! | CCTGGCCTTTTAAGCTAAAT+AGG | + | chr1_1:33153931-33153950 | None:intergenic | 40.0% |
| ! | CCTATTTAGCTTAAAAGGCC+AGG | - | chr1_1:33153928-33153947 | Msa0019120:intron | 40.0% |
| !! | TGCTTAAGAGGCTTTTTGAG+AGG | + | chr1_1:33153961-33153980 | None:intergenic | 40.0% |
| ! | CTCTCTTGATAATCAACACG+AGG | + | chr1_1:33154185-33154204 | None:intergenic | 40.0% |
| ATATAGGCCTAACTAGGGAT+TGG | + | chr1_1:33154438-33154457 | None:intergenic | 40.0% | |
| ! | CTTAGAACTAGGAGTGTGTA+CGG | - | chr1_1:33154617-33154636 | Msa0019120:intron | 40.0% |
| AAACTGTTTGGGGGAACTTA+TGG | - | chr1_1:33154675-33154694 | Msa0019120:intron | 40.0% | |
| GGGTTGAGTTAACCCTTATT+TGG | + | chr1_1:33154892-33154911 | None:intergenic | 40.0% | |
| AACCGTGCTTTATCTTATGC+AGG | - | chr1_1:33155095-33155114 | Msa0019120:intron | 40.0% | |
| GTCCTGCATAAGATAAAGCA+CGG | + | chr1_1:33155100-33155119 | None:intergenic | 40.0% | |
| GTGCTTTATCTTATGCAGGA+CGG | - | chr1_1:33155099-33155118 | Msa0019120:intron | 40.0% | |
| TGCTTTATCTTATGCAGGAC+GGG | - | chr1_1:33155100-33155119 | Msa0019120:intron | 40.0% | |
| TTTGCAGCAATGATGCAGAA+AGG | - | chr1_1:33155141-33155160 | Msa0019120:intron | 40.0% | |
| AAAGGAAATCTTCCCATGGT+TGG | - | chr1_1:33155159-33155178 | Msa0019120:intron | 40.0% | |
| AGACCTTTCTTACCAACCAT+GGG | + | chr1_1:33155174-33155193 | None:intergenic | 40.0% | |
| TAGACCTTTCTTACCAACCA+TGG | + | chr1_1:33155175-33155194 | None:intergenic | 40.0% | |
| TAGGCTGATGTAGATAACAG+TGG | - | chr1_1:33153406-33153425 | Msa0019120:intron | 40.0% | |
| AGGCTGATGTAGATAACAGT+GGG | - | chr1_1:33153407-33153426 | Msa0019120:intron | 40.0% | |
| ! | CTTCAATTTGAAAGCGTGGT+CGG | + | chr1_1:33153828-33153847 | None:intergenic | 40.0% |
| CAAATTGAAGAGTTAGGCCT+AGG | - | chr1_1:33153838-33153857 | Msa0019120:intron | 40.0% | |
| !! | CCTGGCCTTTTAAGCTAAAT+AGG | + | chr1_1:33153931-33153950 | None:intergenic | 40.0% |
| ! | CCTATTTAGCTTAAAAGGCC+AGG | - | chr1_1:33153928-33153947 | Msa0019120:intron | 40.0% |
| !! | TGCTTAAGAGGCTTTTTGAG+AGG | + | chr1_1:33153961-33153980 | None:intergenic | 40.0% |
| ! | CTCTCTTGATAATCAACACG+AGG | + | chr1_1:33154185-33154204 | None:intergenic | 40.0% |
| ATATAGGCCTAACTAGGGAT+TGG | + | chr1_1:33154438-33154457 | None:intergenic | 40.0% | |
| ! | CTTAGAACTAGGAGTGTGTA+CGG | - | chr1_1:33154617-33154636 | Msa0019120:intron | 40.0% |
| AAACTGTTTGGGGGAACTTA+TGG | - | chr1_1:33154675-33154694 | Msa0019120:intron | 40.0% | |
| GGGTTGAGTTAACCCTTATT+TGG | + | chr1_1:33154892-33154911 | None:intergenic | 40.0% | |
| AACCGTGCTTTATCTTATGC+AGG | - | chr1_1:33155095-33155114 | Msa0019120:intron | 40.0% | |
| GTCCTGCATAAGATAAAGCA+CGG | + | chr1_1:33155100-33155119 | None:intergenic | 40.0% | |
| GTGCTTTATCTTATGCAGGA+CGG | - | chr1_1:33155099-33155118 | Msa0019120:intron | 40.0% | |
| TGCTTTATCTTATGCAGGAC+GGG | - | chr1_1:33155100-33155119 | Msa0019120:intron | 40.0% | |
| TTTGCAGCAATGATGCAGAA+AGG | - | chr1_1:33155141-33155160 | Msa0019120:intron | 40.0% | |
| AAAGGAAATCTTCCCATGGT+TGG | - | chr1_1:33155159-33155178 | Msa0019120:intron | 40.0% | |
| AGACCTTTCTTACCAACCAT+GGG | + | chr1_1:33155174-33155193 | None:intergenic | 40.0% | |
| TAGACCTTTCTTACCAACCA+TGG | + | chr1_1:33155175-33155194 | None:intergenic | 40.0% | |
| CAACACCGATACATGTGGTT+AGG | + | chr1_1:33153773-33153792 | None:intergenic | 45.0% | |
| AGACACAACACCGATACATG+TGG | + | chr1_1:33153778-33153797 | None:intergenic | 45.0% | |
| GCCTCTTAAGCATATTAGGC+CGG | - | chr1_1:33153969-33153988 | Msa0019120:intron | 45.0% | |
| !! | GGCCTTTTGAAAGCCTGATA+CGG | + | chr1_1:33154313-33154332 | None:intergenic | 45.0% |
| TATCAGGCTTTCAAAAGGCC+AGG | - | chr1_1:33154313-33154332 | Msa0019120:intron | 45.0% | |
| TAAAGCCTAAGTTTGGCCTG+CGG | + | chr1_1:33154369-33154388 | None:intergenic | 45.0% | |
| ACTAGGGATTGGAATAGGCT+AGG | + | chr1_1:33154427-33154446 | None:intergenic | 45.0% | |
| GCCTATTCCAATCCCTAGTT+AGG | - | chr1_1:33154428-33154447 | Msa0019120:intron | 45.0% | |
| GCCTAACTAGGGATTGGAAT+AGG | + | chr1_1:33154432-33154451 | None:intergenic | 45.0% | |
| AAATTCATCGTGGTTGACGG+TGG | - | chr1_1:33154530-33154549 | Msa0019120:intron | 45.0% | |
| ! | TTACCAAGTGAGGCATCAAG+TGG | - | chr1_1:33154593-33154612 | Msa0019120:intron | 45.0% |
| ! | TACCAAGTGAGGCATCAAGT+GGG | - | chr1_1:33154594-33154613 | Msa0019120:intron | 45.0% |
| ! | CATCAAGTGGGCTTAGAACT+AGG | - | chr1_1:33154606-33154625 | Msa0019120:intron | 45.0% |
| GCAGAAAGGAAATCTTCCCA+TGG | - | chr1_1:33155155-33155174 | Msa0019120:intron | 45.0% | |
| !! | CTTCCCATGGTTGGTAAGAA+AGG | - | chr1_1:33155168-33155187 | Msa0019120:intron | 45.0% |
| CTTCAGCATTCGTTTCAAGG+AGG | - | chr1_1:33155203-33155222 | Msa0019120:intron | 45.0% | |
| CAACACCGATACATGTGGTT+AGG | + | chr1_1:33153773-33153792 | None:intergenic | 45.0% | |
| AGACACAACACCGATACATG+TGG | + | chr1_1:33153778-33153797 | None:intergenic | 45.0% | |
| GCCTCTTAAGCATATTAGGC+CGG | - | chr1_1:33153969-33153988 | Msa0019120:intron | 45.0% | |
| !! | GGCCTTTTGAAAGCCTGATA+CGG | + | chr1_1:33154313-33154332 | None:intergenic | 45.0% |
| TATCAGGCTTTCAAAAGGCC+AGG | - | chr1_1:33154313-33154332 | Msa0019120:intron | 45.0% | |
| TAAAGCCTAAGTTTGGCCTG+CGG | + | chr1_1:33154369-33154388 | None:intergenic | 45.0% | |
| ACTAGGGATTGGAATAGGCT+AGG | + | chr1_1:33154427-33154446 | None:intergenic | 45.0% | |
| GCCTATTCCAATCCCTAGTT+AGG | - | chr1_1:33154428-33154447 | Msa0019120:intron | 45.0% | |
| GCCTAACTAGGGATTGGAAT+AGG | + | chr1_1:33154432-33154451 | None:intergenic | 45.0% | |
| AAATTCATCGTGGTTGACGG+TGG | - | chr1_1:33154530-33154549 | Msa0019120:intron | 45.0% | |
| ! | TTACCAAGTGAGGCATCAAG+TGG | - | chr1_1:33154593-33154612 | Msa0019120:intron | 45.0% |
| ! | TACCAAGTGAGGCATCAAGT+GGG | - | chr1_1:33154594-33154613 | Msa0019120:intron | 45.0% |
| ! | CATCAAGTGGGCTTAGAACT+AGG | - | chr1_1:33154606-33154625 | Msa0019120:intron | 45.0% |
| GCAGAAAGGAAATCTTCCCA+TGG | - | chr1_1:33155155-33155174 | Msa0019120:intron | 45.0% | |
| !! | CTTCCCATGGTTGGTAAGAA+AGG | - | chr1_1:33155168-33155187 | Msa0019120:intron | 45.0% |
| CTTCAGCATTCGTTTCAAGG+AGG | - | chr1_1:33155203-33155222 | Msa0019120:intron | 45.0% | |
| CAACAAGCTAGCGACGAGTT+TGG | - | chr1_1:33153559-33153578 | Msa0019120:intron | 50.0% | |
| TGAAGAGTTAGGCCTAGGGA+TGG | - | chr1_1:33153843-33153862 | Msa0019120:intron | 50.0% | |
| GAAGAGTTAGGCCTAGGGAT+GGG | - | chr1_1:33153844-33153863 | Msa0019120:intron | 50.0% | |
| TTAGGCCTAGGGATGGGAAT+AGG | - | chr1_1:33153850-33153869 | Msa0019120:intron | 50.0% | |
| !! | TTTTTGAGAGGCTTGTGGCC+TGG | + | chr1_1:33153949-33153968 | None:intergenic | 50.0% |
| !! | GAGGCTTTTTGAGAGGCTTG+TGG | + | chr1_1:33153954-33153973 | None:intergenic | 50.0% |
| GCCGGCCTAATATGCTTAAG+AGG | + | chr1_1:33153973-33153992 | None:intergenic | 50.0% | |
| GGCCGTATCAGGCTTTCAAA+AGG | - | chr1_1:33154308-33154327 | Msa0019120:intron | 50.0% | |
| AGGCCTTACAAAGCCTAGCT+CGG | - | chr1_1:33154401-33154420 | Msa0019120:intron | 50.0% | |
| AGGCGATACGGCTAAAGTAG+TGG | + | chr1_1:33154930-33154949 | None:intergenic | 50.0% | |
| CAACAAGCTAGCGACGAGTT+TGG | - | chr1_1:33153559-33153578 | Msa0019120:intron | 50.0% | |
| TGAAGAGTTAGGCCTAGGGA+TGG | - | chr1_1:33153843-33153862 | Msa0019120:intron | 50.0% | |
| GAAGAGTTAGGCCTAGGGAT+GGG | - | chr1_1:33153844-33153863 | Msa0019120:intron | 50.0% | |
| TTAGGCCTAGGGATGGGAAT+AGG | - | chr1_1:33153850-33153869 | Msa0019120:intron | 50.0% | |
| !! | TTTTTGAGAGGCTTGTGGCC+TGG | + | chr1_1:33153949-33153968 | None:intergenic | 50.0% |
| !! | GAGGCTTTTTGAGAGGCTTG+TGG | + | chr1_1:33153954-33153973 | None:intergenic | 50.0% |
| GCCGGCCTAATATGCTTAAG+AGG | + | chr1_1:33153973-33153992 | None:intergenic | 50.0% | |
| GGCCGTATCAGGCTTTCAAA+AGG | - | chr1_1:33154308-33154327 | Msa0019120:intron | 50.0% | |
| AGGCCTTACAAAGCCTAGCT+CGG | - | chr1_1:33154401-33154420 | Msa0019120:intron | 50.0% | |
| AGGCGATACGGCTAAAGTAG+TGG | + | chr1_1:33154930-33154949 | None:intergenic | 50.0% | |
| CTTGGCCTATTCCCATCCCT+AGG | + | chr1_1:33153858-33153877 | None:intergenic | 55.0% | |
| ACAGGCTTGTAGGCCGTATC+AGG | - | chr1_1:33154297-33154316 | Msa0019120:intron | 55.0% | |
| GGCTTTCAAAAGGCCAGGCT+CGG | - | chr1_1:33154318-33154337 | Msa0019120:intron | 55.0% | |
| GCTTTCAAAAGGCCAGGCTC+GGG | - | chr1_1:33154319-33154338 | Msa0019120:intron | 55.0% | |
| !!! | CTACTTTTTAGGCCCGAGCC+TGG | + | chr1_1:33154334-33154353 | None:intergenic | 55.0% |
| CAGGCTCGGGCCTAAAAAGT+AGG | - | chr1_1:33154332-33154351 | Msa0019120:intron | 55.0% | |
| TTTGGCCTGCGGCCTATCAT+AGG | + | chr1_1:33154358-33154377 | None:intergenic | 55.0% | |
| ATAGGCCGCAGGCCAAACTT+AGG | - | chr1_1:33154361-33154380 | Msa0019120:intron | 55.0% | |
| ! | AGGCCGAGCTAGGCTTTGTA+AGG | + | chr1_1:33154407-33154426 | None:intergenic | 55.0% |
| AGCCCACTTGATGCCTCACT+TGG | + | chr1_1:33154599-33154618 | None:intergenic | 55.0% | |
| CTTGGCCTATTCCCATCCCT+AGG | + | chr1_1:33153858-33153877 | None:intergenic | 55.0% | |
| ACAGGCTTGTAGGCCGTATC+AGG | - | chr1_1:33154297-33154316 | Msa0019120:intron | 55.0% | |
| GGCTTTCAAAAGGCCAGGCT+CGG | - | chr1_1:33154318-33154337 | Msa0019120:intron | 55.0% | |
| GCTTTCAAAAGGCCAGGCTC+GGG | - | chr1_1:33154319-33154338 | Msa0019120:intron | 55.0% | |
| !!! | CTACTTTTTAGGCCCGAGCC+TGG | + | chr1_1:33154334-33154353 | None:intergenic | 55.0% |
| CAGGCTCGGGCCTAAAAAGT+AGG | - | chr1_1:33154332-33154351 | Msa0019120:intron | 55.0% | |
| TTTGGCCTGCGGCCTATCAT+AGG | + | chr1_1:33154358-33154377 | None:intergenic | 55.0% | |
| ATAGGCCGCAGGCCAAACTT+AGG | - | chr1_1:33154361-33154380 | Msa0019120:intron | 55.0% | |
| ! | AGGCCGAGCTAGGCTTTGTA+AGG | + | chr1_1:33154407-33154426 | None:intergenic | 55.0% |
| AGCCCACTTGATGCCTCACT+TGG | + | chr1_1:33154599-33154618 | None:intergenic | 55.0% | |
| GTAGGCCTATGATAGGCCGC+AGG | - | chr1_1:33154350-33154369 | Msa0019120:intron | 60.0% | |
| GGAATAGGCTAGGCCGAGCT+AGG | + | chr1_1:33154417-33154436 | None:intergenic | 60.0% | |
| GTAGGCCTATGATAGGCCGC+AGG | - | chr1_1:33154350-33154369 | Msa0019120:intron | 60.0% | |
| GGAATAGGCTAGGCCGAGCT+AGG | + | chr1_1:33154417-33154436 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 33153283 | 33155239 | 33153283 | ID=Msa0019120;Name=Msa0019120 |
| chr1_1 | mRNA | 33153283 | 33155239 | 33153283 | ID=Msa0019120-mRNA-1;Parent=Msa0019120;Name=Msa0019120-mRNA-1;_AED=0.47;_eAED=0.47;_QI=0|0|0|0.66|1|1|3|0|118 |
| chr1_1 | exon | 33155231 | 33155239 | 33155231 | ID=Msa0019120-mRNA-1:exon:10574;Parent=Msa0019120-mRNA-1 |
| chr1_1 | exon | 33154889 | 33155113 | 33154889 | ID=Msa0019120-mRNA-1:exon:10573;Parent=Msa0019120-mRNA-1 |
| chr1_1 | exon | 33153283 | 33153405 | 33153283 | ID=Msa0019120-mRNA-1:exon:10572;Parent=Msa0019120-mRNA-1 |
| chr1_1 | CDS | 33155231 | 33155239 | 33155231 | ID=Msa0019120-mRNA-1:cds;Parent=Msa0019120-mRNA-1 |
| chr1_1 | CDS | 33154889 | 33155113 | 33154889 | ID=Msa0019120-mRNA-1:cds;Parent=Msa0019120-mRNA-1 |
| chr1_1 | CDS | 33153283 | 33153405 | 33153283 | ID=Msa0019120-mRNA-1:cds;Parent=Msa0019120-mRNA-1 |
| Gene Sequence |
| Protein sequence |
