AlfalfaGEDB | Msa1087510

M. sativa cultivar zhongmu-4 / Msa1087510

KEGG: K09008
GO: -
PFAM: PF04430.17

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1087510	XP_013443964.1	94.413	179	8	2	1	179	1	177	9.16e-118	341

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1087510	sp\|Q6DFN1\|NDUF3_XENTR	35.780	109	70	0	66	174	66	174	8.80e-21	87.4

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1087510	B7FHB1	94.413	179	8	2	1	179	1	177	4.38e-118	341

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0000490	Msa1087510	0.811360	7.280071e-51	-8.615850e-47
Msa0019120	Msa1087510	-0.804944	1.693567e-49	-8.615850e-47
Msa0022750	Msa1087510	0.803701	3.074477e-49	-8.615850e-47
Msa0036370	Msa1087510	-0.813904	2.021225e-51	-8.615850e-47
Msa0055070	Msa1087510	-0.804039	2.616052e-49	-8.615850e-47
Msa0090390	Msa1087510	-0.806477	8.070930e-50	-8.615850e-47
Msa0099510	Msa1087510	-0.816227	6.164412e-52	-8.615850e-47
Msa0101020	Msa1087510	-0.800881	1.170427e-48	-8.615850e-47
Msa0104610	Msa1087510	-0.801406	9.139555e-49	-8.615850e-47
Msa0609970	Msa1087510	-0.808479	3.034678e-50	-8.615850e-47
Msa0617770	Msa1087510	0.818385	2.015040e-52	-8.615850e-47
Msa0618200	Msa1087510	0.832750	7.908191e-56	-8.615850e-47
Msa0619180	Msa1087510	-0.804691	1.913014e-49	-8.615850e-47
Msa0626680	Msa1087510	-0.808337	3.254944e-50	-8.615850e-47
Msa0657460	Msa1087510	0.821229	4.511894e-53	-8.615850e-47
Msa0664760	Msa1087510	-0.814734	1.324681e-51	-8.615850e-47
Msa0687230	Msa1087510	-0.800295	1.540813e-48	-8.615850e-47
Msa0744090	Msa1087510	-0.827805	1.277482e-54	-8.615850e-47
Msa0754720	Msa1087510	0.801976	6.984342e-49	-8.615850e-47
Msa0756930	Msa1087510	-0.818425	1.973116e-52	-8.615850e-47
Msa0774750	Msa1087510	-0.810936	8.995650e-51	-8.615850e-47
Msa0781270	Msa1087510	-0.801102	1.054986e-48	-8.615850e-47
Msa0784620	Msa1087510	-0.807079	6.023586e-50	-8.615850e-47
Msa0788110	Msa1087510	-0.803128	4.041240e-49	-8.615850e-47
Msa0793140	Msa1087510	0.816192	6.275862e-52	-8.615850e-47
Msa0798810	Msa1087510	0.820963	5.194924e-53	-8.615850e-47
Msa0799010	Msa1087510	0.813050	3.114266e-51	-8.615850e-47
Msa0814630	Msa1087510	0.827024	1.966052e-54	-8.615850e-47
Msa0820530	Msa1087510	0.828701	7.765397e-55	-8.615850e-47
Msa0824730	Msa1087510	-0.803020	4.255146e-49	-8.615850e-47
Msa0825280	Msa1087510	-0.832383	9.756093e-56	-8.615850e-47
Msa0836210	Msa1087510	0.812880	3.393304e-51	-8.615850e-47
Msa0836500	Msa1087510	-0.811964	5.378492e-51	-8.615850e-47
Msa0140520	Msa1087510	0.812984	3.218955e-51	-8.615850e-47
Msa0145110	Msa1087510	-0.807513	4.871769e-50	-8.615850e-47
Msa0177700	Msa1087510	0.812080	5.074659e-51	-8.615850e-47
Msa0179000	Msa1087510	-0.804789	1.824760e-49	-8.615850e-47
Msa0186310	Msa1087510	-0.805114	1.560535e-49	-8.615850e-47
Msa0196020	Msa1087510	0.803617	3.200967e-49	-8.615850e-47
Msa0196340	Msa1087510	-0.813642	2.308531e-51	-8.615850e-47
Msa0198520	Msa1087510	-0.803119	4.059148e-49	-8.615850e-47
Msa0198530	Msa1087510	-0.806729	7.140960e-50	-8.615850e-47
Msa0208810	Msa1087510	-0.807191	5.702191e-50	-8.615850e-47
Msa0212750	Msa1087510	0.802494	5.461728e-49	-8.615850e-47
Msa0219250	Msa1087510	0.819197	1.317647e-52	-8.615850e-47
Msa0227230	Msa1087510	-0.804862	1.761754e-49	-8.615850e-47
Msa0227310	Msa1087510	0.851461	8.741926e-61	-8.615850e-47
Msa0236700	Msa1087510	0.807867	4.097391e-50	-8.615850e-47
Msa0238230	Msa1087510	-0.809673	1.684765e-50	-8.615850e-47
Msa0370160	Msa1087510	0.806927	6.486614e-50	-8.615850e-47
Msa0387370	Msa1087510	-0.811064	8.441068e-51	-8.615850e-47
Msa0387880	Msa1087510	0.802345	5.864202e-49	-8.615850e-47
Msa0387910	Msa1087510	-0.821871	3.206013e-53	-8.615850e-47
Msa0388030	Msa1087510	0.808138	3.588231e-50	-8.615850e-47
Msa0392200	Msa1087510	-0.802895	4.515263e-49	-8.615850e-47
Msa0404700	Msa1087510	-0.806140	9.505315e-50	-8.615850e-47
Msa0410300	Msa1087510	-0.808029	3.784532e-50	-8.615850e-47
Msa0412440	Msa1087510	-0.810956	8.906424e-51	-8.615850e-47
Msa0419640	Msa1087510	0.849101	4.014088e-60	-8.615850e-47
Msa0421260	Msa1087510	-0.815888	7.340616e-52	-8.615850e-47
Msa0439890	Msa1087510	-0.808716	2.701131e-50	-8.615850e-47
Msa0442310	Msa1087510	-0.807124	5.890841e-50	-8.615850e-47
Msa0456910	Msa1087510	-0.827437	1.565683e-54	-8.615850e-47
Msa0461590	Msa1087510	-0.827076	1.909678e-54	-8.615850e-47
Msa0474590	Msa1087510	-0.813943	1.981517e-51	-8.615850e-47
Msa0990590	Msa1087510	-0.812080	5.074705e-51	-8.615850e-47
Msa1002600	Msa1087510	0.816317	5.885651e-52	-8.615850e-47
Msa1037650	Msa1087510	0.824244	8.965204e-54	-8.615850e-47
Msa1069660	Msa1087510	0.801829	7.484053e-49	-8.615850e-47
Msa1087510	Msa1089740	0.803398	3.553979e-49	-8.615850e-47
Msa1087510	Msa1094540	0.815362	9.609752e-52	-8.615850e-47
Msa1087510	Msa1103660	0.807545	4.797384e-50	-8.615850e-47
Msa1087510	Msa1126120	0.800717	1.264057e-48	-8.615850e-47
Msa1087510	Msa1163650	0.800503	1.397738e-48	-8.615850e-47
Msa1087510	Msa1174310	-0.812846	3.452006e-51	-8.615850e-47
Msa1087510	Msa1181170	0.810714	1.004909e-50	-8.615850e-47
Msa1087510	Msa1182630	-0.813663	2.283326e-51	-8.615850e-47
Msa1087510	Msa1199710	-0.814686	1.357708e-51	-8.615850e-47
Msa1087510	Msa1211050	0.989710	2.631845e-179	-8.615850e-47
Msa1087510	Msa1246530	0.801588	8.389881e-49	-8.615850e-47
Msa1087510	Msa1296300	-0.810115	1.353396e-50	-8.615850e-47
Msa1087510	Msa1340040	0.807075	6.033584e-50	-8.615850e-47
Msa1087510	Msa1360890	0.812720	3.678296e-51	-8.615850e-47
Msa1087510	Msa1376090	0.802827	4.663702e-49	-8.615850e-47
Msa1087510	Msa1398860	-0.816085	6.631211e-52	-8.615850e-47
Msa1087510	Msa1408760	0.951330	2.566551e-109	-8.615850e-47
Msa1087510	Msa1412930	0.822171	2.732187e-53	-8.615850e-47
Msa1087510	Msa1422840	-0.838888	2.200905e-57	-8.615850e-47
Msa1087510	Msa1442220	0.828330	9.547494e-55	-8.615850e-47
Msa1087510	Msa1443610	-0.817852	2.659380e-52	-8.615850e-47
Msa1087510	Msa1449910	-0.805551	1.264200e-49	-8.615850e-47
Msa1087510	Msa1459760	0.800741	1.249924e-48	-8.615850e-47
Msa0239940	Msa1087510	-0.825534	4.449054e-54	-8.615850e-47
Msa0258880	Msa1087510	0.817042	4.047329e-52	-8.615850e-47
Msa0259160	Msa1087510	-0.812770	3.585951e-51	-8.615850e-47
Msa0259270	Msa1087510	-0.818318	2.086669e-52	-8.615850e-47
Msa0267870	Msa1087510	-0.835167	1.964045e-56	-8.615850e-47
Msa0275400	Msa1087510	0.825277	5.117853e-54	-8.615850e-47
Msa0289400	Msa1087510	-0.822923	1.826894e-53	-8.615850e-47
Msa0295000	Msa1087510	0.808497	3.008496e-50	-8.615850e-47
Msa0308200	Msa1087510	-0.808521	2.973320e-50	-8.615850e-47
Msa0308220	Msa1087510	-0.830031	3.691443e-55	-8.615850e-47
Msa0327410	Msa1087510	-0.814376	1.589863e-51	-8.615850e-47
Msa0335320	Msa1087510	0.829697	4.451504e-55	-8.615850e-47
Msa0343190	Msa1087510	-0.814584	1.430188e-51	-8.615850e-47
Msa0505060	Msa1087510	-0.806275	8.904486e-50	-8.615850e-47
Msa0536790	Msa1087510	-0.815079	1.110875e-51	-8.615850e-47
Msa0537770	Msa1087510	-0.801557	8.513563e-49	-8.615850e-47
Msa0565620	Msa1087510	0.830971	2.174427e-55	-8.615850e-47
Msa0578090	Msa1087510	-0.820649	6.134648e-53	-8.615850e-47
Msa0585650	Msa1087510	0.803695	3.083743e-49	-8.615850e-47
Msa0586850	Msa1087510	-0.823861	1.102690e-53	-8.615850e-47
Msa0600410	Msa1087510	0.818257	2.154633e-52	-8.615850e-47
Msa0843120	Msa1087510	0.804103	2.536800e-49	-8.615850e-47
Msa0851470	Msa1087510	-0.828385	9.258066e-55	-8.615850e-47
Msa0855160	Msa1087510	0.817980	2.489073e-52	-8.615850e-47
Msa0869010	Msa1087510	-0.805345	1.396089e-49	-8.615850e-47
Msa0881580	Msa1087510	-0.817604	3.025347e-52	-8.615850e-47
Msa0895310	Msa1087510	-0.816520	5.301647e-52	-8.615850e-47
Msa0945120	Msa1087510	-0.812018	5.234647e-51	-8.615850e-47
Msa0947530	Msa1087510	0.835534	1.586952e-56	-8.615850e-47
Msa0957450	Msa1087510	0.821036	4.997594e-53	-8.615850e-47
Msa0965020	Msa1087510	-0.804100	2.539904e-49	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1087510	MtrunA17_Chr8g0337221	94.413	179	8	2	1	179	1	177	8.42e-122	341

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1087510	AT2G44525.1	72.626	179	40	2	1	179	1	170	4.11e-92	266
Msa1087510	AT3G60150.1	71.508	179	42	2	1	179	1	170	1.84e-89	259
Msa1087510	AT3G60150.4	65.789	152	43	2	1	152	1	143	2.03e-68	205
Msa1087510	AT3G60150.2	67.619	105	25	2	1	105	1	96	9.84e-44	142
Msa1087510	AT3G60150.3	67.619	105	25	2	1	105	1	96	9.84e-44	142

Find 70 sgRNAs with CRISPR-Local

Find 294 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ACTTCTTGTTGTGTTGTTTC+TGG	0.118738	7_3:-229159	None:intergenic
GATACTGGATTTACTGTAAA+TGG	0.188286	7_3:+229820	Msa1087510:CDS
TTGCCAGAGATTCTGATTAT+TGG	0.198809	7_3:+231774	Msa1087510:intron
ATTTCTTCAATATTACTATT+AGG	0.241598	7_3:+233318	Msa1087510:three_prime_UTR
AATACTCTCTTCCAAATTAA+TGG	0.249280	7_3:-233476	None:intergenic
AACAAGAAGTTCGTGGGTTT+GGG	0.250066	7_3:+229172	Msa1087510:five_prime_UTR
GTATGTAATTGCCATTAATT+TGG	0.261720	7_3:+233465	Msa1087510:three_prime_UTR
TATTGTAGGTTTAAAGATAC+TGG	0.279697	7_3:+229805	Msa1087510:intron
CAACAAGAAGTTCGTGGGTT+TGG	0.292786	7_3:+229171	Msa1087510:five_prime_UTR
CAAATTGTCCGCCCTATTCC+AGG	0.322257	7_3:+231264	Msa1087510:CDS
ACGGAGAGAGGGCAAGGAAT+TGG	0.326466	7_3:-229331	None:intergenic
GTGATCTCTGAAAACTTGTT+TGG	0.331729	7_3:-229898	None:intergenic
CGTTGCGGAGATTGCGTATG+AGG	0.347381	7_3:-229263	None:intergenic
CTGAACTTAGACGGTTTATT+CGG	0.349745	7_3:+231826	Msa1087510:CDS
TATTGTCACTTCTGATTACT+TGG	0.357811	7_3:+233495	Msa1087510:three_prime_UTR
CTTGTTGTGTTGTTTCTGGA+TGG	0.358546	7_3:-229155	None:intergenic
TGAAAACGGAGTTGGTCTTC+GGG	0.364676	7_3:-229399	None:intergenic
TTGAAAACGGAGTTGGTCTT+CGG	0.366792	7_3:-229400	None:intergenic
CGGAGAGAGGGCAAGGAATT+GGG	0.376081	7_3:-229330	None:intergenic
CGGAGATTGCGTATGAGGTT+TGG	0.390834	7_3:-229258	None:intergenic
CTAGAAAAGCCAACTTTGCT+TGG	0.400842	7_3:-233220	None:intergenic
TTTCAGAGATCACTGCTGAT+AGG	0.414377	7_3:+229908	Msa1087510:CDS
CTTCATGAAGTAACTCCATA+TGG	0.421691	7_3:-232967	None:intergenic
CTCATAAATCCAAGCAAAGT+TGG	0.431683	7_3:+233211	Msa1087510:three_prime_UTR
CGAATAAACCGTCTAAGTTC+AGG	0.439607	7_3:-231825	None:intergenic
TTGTTGTGTTGTTTCTGGAT+GGG	0.447509	7_3:-229154	None:intergenic
GCTGCCGCACTTCTTCCATA+TGG	0.447563	7_3:+232952	Msa1087510:CDS
TGGAGTTACTTCATGAAGCT+TGG	0.461189	7_3:+232972	Msa1087510:exon
AGACGGTTTATTCGGTCTAC+TGG	0.478171	7_3:+231834	Msa1087510:CDS
TTGGAAATTTGATCATGTCT+TGG	0.480044	7_3:+229872	Msa1087510:CDS
TGTGAGCATATTTGAACAAA+GGG	0.481813	7_3:-233015	None:intergenic
GTGTTGTTTCTGGATGGGTC+AGG	0.487465	7_3:-229149	None:intergenic
GAAGGAAGTTTGCTTTGTGT+TGG	0.489361	7_3:+229853	Msa1087510:CDS
GTTTAACATCCCCAAGGGAG+GGG	0.495721	7_3:-233361	None:intergenic
TTTAACATCCCCAAGGGAGG+GGG	0.498649	7_3:-233360	None:intergenic
AGCGCGACGGAGAGAGGGCA+AGG	0.502973	7_3:-229337	None:intergenic
GAGAAAGCGCGACGGAGAGA+GGG	0.509976	7_3:-229342	None:intergenic
GAGATTCTGATTATTGGCTG+TGG	0.521779	7_3:+231780	Msa1087510:intron
GAAGGTTTGTTGAGCTTGAG+AGG	0.526353	7_3:-229291	None:intergenic
TTCTGATTATTGGCTGTGGA+AGG	0.533781	7_3:+231784	Msa1087510:CDS
TGTTTAACATCCCCAAGGGA+GGG	0.533926	7_3:-233362	None:intergenic
AGAGAAAGCGCGACGGAGAG+AGG	0.539475	7_3:-229343	None:intergenic
ATGTTGATCCTGAACTTAGA+CGG	0.540665	7_3:+231817	Msa1087510:CDS
AGAGTAGGTACCCTTGAAAA+CGG	0.541466	7_3:-229413	None:intergenic
GTAAATGGAGTTGAATATGA+AGG	0.545158	7_3:+229835	Msa1087510:CDS
GGATGATTGTTATGTGGAGA+AGG	0.556995	7_3:-229309	None:intergenic
GTCACAACTCTAACAAAATG+AGG	0.560227	7_3:-233279	None:intergenic
TACAACATACTAAATGAAGA+AGG	0.562312	7_3:+232919	Msa1087510:CDS
CAACACAACAAGAAGTTCGT+GGG	0.568412	7_3:+229166	Msa1087510:five_prime_UTR
GCTTGAGAGGTTGTTCGTTG+CGG	0.572374	7_3:-229278	None:intergenic
ATGTGAGCATATTTGAACAA+AGG	0.581253	7_3:-233016	None:intergenic
GTCGTTGTGTTCGATAAAGA+CGG	0.583295	7_3:+229112	None:intergenic
GAATTGGGATGATTGTTATG+TGG	0.592998	7_3:-229315	None:intergenic
ATGTTTAACATCCCCAAGGG+AGG	0.599914	7_3:-233363	None:intergenic
ACAACACAACAAGAAGTTCG+TGG	0.601920	7_3:+229165	Msa1087510:five_prime_UTR
TTAACATCCCCAAGGGAGGG+GGG	0.609343	7_3:-233359	None:intergenic
GGTACCCTTGAAAACGGAGT+TGG	0.609702	7_3:-229407	None:intergenic
TGAAATCTTGCGTAAATCTG+CGG	0.610671	7_3:+233049	Msa1087510:three_prime_UTR
ATAAATGTTTAACATCCCCA+AGG	0.614861	7_3:-233367	None:intergenic
GAAAACGGAGTTGGTCTTCG+GGG	0.618386	7_3:-229398	None:intergenic
ACAAGAAGTTCGTGGGTTTG+GGG	0.622996	7_3:+229173	Msa1087510:five_prime_UTR
GAAGTTAGAAGCTGTTGACT+CGG	0.627184	7_3:+231860	Msa1087510:CDS
AGGGTGGCTACTAAGAGTAT+AGG	0.645956	7_3:-232996	None:intergenic
CGTATAAAGAGAAAGCGCGA+CGG	0.654869	7_3:-229350	None:intergenic
TTTGAAAACATCAACAGACA+TGG	0.662637	7_3:-233145	None:intergenic
GAGCATATTTGAACAAAGGG+TGG	0.666943	7_3:-233012	None:intergenic
TAAATGTTTAACATCCCCAA+GGG	0.679311	7_3:-233366	None:intergenic
AACTCCATATGGAAGAAGTG+CGG	0.679978	7_3:-232956	None:intergenic
AAATCCAACCTGGAATAGGG+CGG	0.690412	7_3:-231272	None:intergenic
AAATGAAGAAGGTCGCATTG+TGG	0.696515	7_3:+232930	Msa1087510:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATTTTTAGTTAGTTTTTATA+TGG	+	chr7_3:229510-229529	Msa1087510:intron	10.0%
!!!	GATTTTTTTATTTAATGTAA+TGG	+	chr7_3:229708-229727	Msa1087510:intron	10.0%
!!	AAAAAAAAAAAAATAATGCA+AGG	-	chr7_3:231929-231948	None:intergenic	10.0%
!!!	TCAATATATTTTTGAATTTA+TGG	+	chr7_3:233403-233422	Msa1087510:three_prime_UTR	10.0%
!!	AAATAGAAATGATTATTATG+TGG	-	chr7_3:229451-229470	None:intergenic	15.0%
!!	AAAAGACTTTAATGTAAAAT+GGG	+	chr7_3:229542-229561	Msa1087510:intron	15.0%
!!!	TTTTACAAATATACTCTATA+AGG	-	chr7_3:229982-230001	None:intergenic	15.0%
!!!	AATTTAAAACCATTTAAAAG+TGG	-	chr7_3:230038-230057	None:intergenic	15.0%
!!!	AATTCAAATCATTTTGATAA+GGG	-	chr7_3:230466-230485	None:intergenic	15.0%
!!	ATGATCATATTAAAATATCA+TGG	-	chr7_3:230770-230789	None:intergenic	15.0%
!!!	CTATAAAATGTTTCTAAAAA+AGG	-	chr7_3:230816-230835	None:intergenic	15.0%
!!	TAGTTTCTAAATTATAAGTT+AGG	+	chr7_3:231500-231519	Msa1087510:intron	15.0%
!!!	AATATTTTTCTTTACATTGT+TGG	+	chr7_3:231953-231972	Msa1087510:intron	15.0%
!!!	ATATTTTTCTTTACATTGTT+GGG	+	chr7_3:231954-231973	Msa1087510:intron	15.0%
!!	ATTTCTTCAATATTACTATT+AGG	+	chr7_3:233318-233337	Msa1087510:three_prime_UTR	15.0%
!!	GAAAAGACTTTAATGTAAAA+TGG	+	chr7_3:229541-229560	Msa1087510:intron	20.0%
!!	AATATACTCTATAAGGTAAA+AGG	-	chr7_3:229975-229994	None:intergenic	20.0%
!!	CAAACATTAAAGAAAACAAT+TGG	-	chr7_3:230005-230024	None:intergenic	20.0%
!!!	TAAATGGTTTTAAATTATCG+TGG	+	chr7_3:230042-230061	Msa1087510:intron	20.0%
!!!	TTAAAGTGGAAATTTTATCT+TGG	+	chr7_3:230316-230335	Msa1087510:intron	20.0%
!!!	TAAAGTGGAAATTTTATCTT+GGG	+	chr7_3:230317-230336	Msa1087510:intron	20.0%
!!!	CAATTCAAATCATTTTGATA+AGG	-	chr7_3:230467-230486	None:intergenic	20.0%
!!!	ATAAAGTTTTGTAATGTGTT+GGG	+	chr7_3:230575-230594	Msa1087510:intron	20.0%
!!	CAAACTCTTAAGAAAATTAT+AGG	-	chr7_3:230645-230664	None:intergenic	20.0%
!!!	AATTTTCTTAAGAGTTTGTT+TGG	+	chr7_3:230647-230666	Msa1087510:intron	20.0%
!!!	ATTTTCTTAAGAGTTTGTTT+GGG	+	chr7_3:230648-230667	Msa1087510:intron	20.0%
!!	AAAAAAATAGGATTTGGATT+TGG	-	chr7_3:231059-231078	None:intergenic	20.0%
!!	TTACACAAAAAAATAGGATT+TGG	-	chr7_3:231065-231084	None:intergenic	20.0%
!!	ATCTTGAATTGATATCTTAT+TGG	+	chr7_3:231205-231224	Msa1087510:intron	20.0%
!!	ATTCAAATAGGAAAAATCAA+AGG	-	chr7_3:231367-231386	None:intergenic	20.0%
!!	TAGAAAAGATAATTATACAC+GGG	-	chr7_3:231599-231618	None:intergenic	20.0%
!!	GTAGAAAAGATAATTATACA+CGG	-	chr7_3:231600-231619	None:intergenic	20.0%
!!	TAGATCAAAATCAATTTGAT+AGG	-	chr7_3:231728-231747	None:intergenic	20.0%
!!!	TATTTTTCTTTACATTGTTG+GGG	+	chr7_3:231955-231974	Msa1087510:intron	20.0%
!!	ATGGATCAAAATAAAATCAT+AGG	+	chr7_3:232380-232399	Msa1087510:intron	20.0%
!!!	TGATTGAAACATGATTTTAA+AGG	+	chr7_3:232721-232740	Msa1087510:intron	20.0%
!	TGATTATTATGTGGAATGAA+AGG	-	chr7_3:229442-229461	None:intergenic	25.0%
!!	TTTCTTTCCATTTTGCAAAA+TGG	+	chr7_3:229470-229489	Msa1087510:intron	25.0%
!!	TTCTTTCCATTTTGCAAAAT+GGG	+	chr7_3:229471-229490	Msa1087510:intron	25.0%
!!	TAGTTTTTATATGGTGTTCA+AGG	+	chr7_3:229519-229538	Msa1087510:intron	25.0%
!	ACCAATAATTGTATTGTTGA+AGG	+	chr7_3:229626-229645	Msa1087510:intron	25.0%
!	CCAATAATTGTATTGTTGAA+GGG	+	chr7_3:229627-229646	Msa1087510:intron	25.0%
!	TTAACATGATTGTTTCGATA+TGG	+	chr7_3:229652-229671	Msa1087510:intron	25.0%
!	TAACATGATTGTTTCGATAT+GGG	+	chr7_3:229653-229672	Msa1087510:intron	25.0%
!!!	TGCTAAGATCATTGTTTTAT+CGG	+	chr7_3:229741-229760	Msa1087510:intron	25.0%
!!	ACTGATTTCAATGATATTGT+AGG	+	chr7_3:229791-229810	Msa1087510:intron	25.0%
!	TATTGTAGGTTTAAAGATAC+TGG	+	chr7_3:229805-229824	Msa1087510:intron	25.0%
!!	TTCATTTTGTATATCACCAT+TGG	+	chr7_3:230093-230112	Msa1087510:intron	25.0%
!	AATCAAATATCTTCTAGATC+TGG	+	chr7_3:230209-230228	Msa1087510:intron	25.0%
!!!	GTATCGATTAACAAAATTGT+TGG	+	chr7_3:230242-230261	Msa1087510:intron	25.0%
!	AACGAGCTATTATTATCAAA+AGG	+	chr7_3:230265-230284	Msa1087510:intron	25.0%
!	ACTAGTTAAGGAGTAAAAAA+TGG	-	chr7_3:230410-230429	None:intergenic	25.0%
!!	TACTCATTTTATACCACTTT+GGG	-	chr7_3:230499-230518	None:intergenic	25.0%
!!	ATACTCATTTTATACCACTT+TGG	-	chr7_3:230500-230519	None:intergenic	25.0%
!	TACGAAAATCTCTATTCAAA+GGG	-	chr7_3:230532-230551	None:intergenic	25.0%
!	ATACGAAAATCTCTATTCAA+AGG	-	chr7_3:230533-230552	None:intergenic	25.0%
!	CAACACATTACAAAACTTTA+TGG	-	chr7_3:230576-230595	None:intergenic	25.0%
!!!	CATAAAGTTTTGTAATGTGT+TGG	+	chr7_3:230574-230593	Msa1087510:intron	25.0%
!	GAATCTTGTCTTATGTTATT+TGG	-	chr7_3:230984-231003	None:intergenic	25.0%
!	GAGTGATTACACAAAAAAAT+AGG	-	chr7_3:231071-231090	None:intergenic	25.0%
!	ATACAGTGAAATATTTACCA+TGG	-	chr7_3:231096-231115	None:intergenic	25.0%
!	ATAAATAACACAAGCAGATA+CGG	-	chr7_3:231187-231206	None:intergenic	25.0%
!!!	TTTCTAGTTTTCCCTTTTTT+GGG	+	chr7_3:231326-231345	Msa1087510:intron	25.0%
!	TTTAGAAACTACAAGTACAT+GGG	-	chr7_3:231491-231510	None:intergenic	25.0%
!	ATTTAGAAACTACAAGTACA+TGG	-	chr7_3:231492-231511	None:intergenic	25.0%
!	TTCAAAACAACTAGCTAAAA+GGG	-	chr7_3:231650-231669	None:intergenic	25.0%
!	ATTCAAAACAACTAGCTAAA+AGG	-	chr7_3:231651-231670	None:intergenic	25.0%
!	AATCTAAGTAAAACAGTACA+TGG	+	chr7_3:232002-232021	Msa1087510:intron	25.0%
!	TGAGTTTGATAAATGTACAT+TGG	+	chr7_3:232510-232529	Msa1087510:intron	25.0%
!!!	TTATCATGTCACGTTTTAAT+CGG	-	chr7_3:232612-232631	None:intergenic	25.0%
!	TTAGACGTATGTATAAAATC+TGG	+	chr7_3:232639-232658	Msa1087510:intron	25.0%
!	TACAACATACTAAATGAAGA+AGG	+	chr7_3:232919-232938	Msa1087510:CDS	25.0%
!!!	AGAAATTTTGACATATCAAC+AGG	+	chr7_3:233094-233113	Msa1087510:three_prime_UTR	25.0%
!	GTATGTAATTGCCATTAATT+TGG	+	chr7_3:233465-233484	Msa1087510:three_prime_UTR	25.0%
!	AATACTCTCTTCCAAATTAA+TGG	-	chr7_3:233479-233498	None:intergenic	25.0%
	CATTCAGAGAAACAAAAAGA+TGG	+	chr7_3:229206-229225	Msa1087510:exon	30.0%
!	AAACAACCCATTTTGCAAAA+TGG	-	chr7_3:229480-229499	None:intergenic	30.0%
	CCCTTCAACAATACAATTAT+TGG	-	chr7_3:229630-229649	None:intergenic	30.0%
	AACATGATTGTTTCGATATG+GGG	+	chr7_3:229654-229673	Msa1087510:intron	30.0%
	GATACTGGATTTACTGTAAA+TGG	+	chr7_3:229820-229839	Msa1087510:CDS	30.0%
	GTAAATGGAGTTGAATATGA+AGG	+	chr7_3:229835-229854	Msa1087510:CDS	30.0%
	TTGGAAATTTGATCATGTCT+TGG	+	chr7_3:229872-229891	Msa1087510:CDS	30.0%
!!!	ATACTTCTGCCACTTTTAAA+TGG	+	chr7_3:230026-230045	Msa1087510:intron	30.0%
	TTCCACTTTAAACTTCTTAG+CGG	-	chr7_3:230307-230326	None:intergenic	30.0%
!	ATTGTTTTCAAAACCCAAAG+TGG	+	chr7_3:230483-230502	Msa1087510:intron	30.0%
!	AAGAGGTAAACTGTCTATTT+TGG	-	chr7_3:230602-230621	None:intergenic	30.0%
	TACCTCTTAATCTCTCTTAA+TGG	+	chr7_3:230614-230633	Msa1087510:intron	30.0%
	TACCATTAAGAGAGATTAAG+AGG	-	chr7_3:230619-230638	None:intergenic	30.0%
	CTTAATCTCTCTTAATGGTA+TGG	+	chr7_3:230619-230638	Msa1087510:intron	30.0%
!!	AAAAGTACCTTTAGAAGTAC+TGG	-	chr7_3:230952-230971	None:intergenic	30.0%
!	TTTGGAATGCAATCATTAGA+CGG	-	chr7_3:231041-231060	None:intergenic	30.0%
	ACAAGAATTGAATGTGTCAT+TGG	+	chr7_3:231143-231162	Msa1087510:intron	30.0%
!!!	CTTTCTAGTTTTCCCTTTTT+TGG	+	chr7_3:231325-231344	Msa1087510:intron	30.0%
!!!	TTCTAGTTTTCCCTTTTTTG+GGG	+	chr7_3:231327-231346	Msa1087510:intron	30.0%
	TTTCCTATTTGAATGCTCTT+TGG	+	chr7_3:231373-231392	Msa1087510:intron	30.0%
	TTCCTATTTGAATGCTCTTT+GGG	+	chr7_3:231374-231393	Msa1087510:intron	30.0%
	TTACTTTCTCATTTGAGAAG+TGG	+	chr7_3:231442-231461	Msa1087510:intron	30.0%
	ATAACCATATTCGTGACATT+GGG	-	chr7_3:231546-231565	None:intergenic	30.0%
	AATAACCATATTCGTGACAT+TGG	-	chr7_3:231547-231566	None:intergenic	30.0%
	TGATCTATGTTAACTGAAAC+TGG	+	chr7_3:231741-231760	Msa1087510:intron	30.0%
	GATCTATGTTAACTGAAACT+GGG	+	chr7_3:231742-231761	Msa1087510:intron	30.0%
	ACCATTTAACCTCTTTGATA+TGG	+	chr7_3:232059-232078	Msa1087510:intron	30.0%
	CCATTTAACCTCTTTGATAT+GGG	+	chr7_3:232060-232079	Msa1087510:intron	30.0%
!	GATATGGGACTTTAAGAAAA+TGG	+	chr7_3:232075-232094	Msa1087510:intron	30.0%
	GCTGGTATTAAAGGAAATAT+AGG	-	chr7_3:232111-232130	None:intergenic	30.0%
	AGGTTCAAAATAGATGATCA+TGG	+	chr7_3:232182-232201	Msa1087510:intron	30.0%
	GCATAGTTGTACTAATAGTT+AGG	+	chr7_3:232212-232231	Msa1087510:intron	30.0%
	TCAAACTCTTTACAATGTCA+TGG	+	chr7_3:232343-232362	Msa1087510:intron	30.0%
	ATGTCATGGCAACATATAAT+TGG	+	chr7_3:232357-232376	Msa1087510:intron	30.0%
	AAATCATAGGATCTATGTGT+TGG	+	chr7_3:232393-232412	Msa1087510:intron	30.0%
!	AGTTGTGTTATTATAGTCCT+GGG	+	chr7_3:232419-232438	Msa1087510:intron	30.0%
	AACATTATCATGTGACAAGA+CGG	-	chr7_3:232576-232595	None:intergenic	30.0%
!!	TATCATGTCACGTTTTAATC+GGG	-	chr7_3:232611-232630	None:intergenic	30.0%
	TCAAAGAGAAACAATCAAAC+TGG	-	chr7_3:232821-232840	None:intergenic	30.0%
!	TTTCTCTACTCAATAATGGA+TGG	-	chr7_3:232886-232905	None:intergenic	30.0%
	TGCATTTCTCTACTCAATAA+TGG	-	chr7_3:232890-232909	None:intergenic	30.0%
	TGTGAGCATATTTGAACAAA+GGG	-	chr7_3:233018-233037	None:intergenic	30.0%
	ATGTGAGCATATTTGAACAA+AGG	-	chr7_3:233019-233038	None:intergenic	30.0%
	TTTGAAAACATCAACAGACA+TGG	-	chr7_3:233148-233167	None:intergenic	30.0%
	TAAATGTTTAACATCCCCAA+GGG	-	chr7_3:233369-233388	None:intergenic	30.0%
	ATAAATGTTTAACATCCCCA+AGG	-	chr7_3:233370-233389	None:intergenic	30.0%
!!	TTGTTGTGTTGTTTCTGGAT+GGG	-	chr7_3:229157-229176	None:intergenic	35.0%
!!	ACTTCTTGTTGTGTTGTTTC+TGG	-	chr7_3:229162-229181	None:intergenic	35.0%
	GAATTGGGATGATTGTTATG+TGG	-	chr7_3:229318-229337	None:intergenic	35.0%
	TAGTTGTTGCTGGGATTTAA+TGG	+	chr7_3:229767-229786	Msa1087510:intron	35.0%
!	GTGATCTCTGAAAACTTGTT+TGG	-	chr7_3:229901-229920	None:intergenic	35.0%
	TTGCTCATTCTCAAAACCAA+TGG	-	chr7_3:230112-230131	None:intergenic	35.0%
!!!	TGGTTTTGAGAATGAGCAAA+TGG	+	chr7_3:230113-230132	Msa1087510:intron	35.0%
	GAATTAGCATCATCATTAGC+TGG	+	chr7_3:230186-230205	Msa1087510:intron	35.0%
!	TTCTTAAGAGTTTGTTTGGG+AGG	+	chr7_3:230651-230670	Msa1087510:intron	35.0%
!	TCTTAAGAGTTTGTTTGGGA+GGG	+	chr7_3:230652-230671	Msa1087510:intron	35.0%
!!!	GGATTTTGGAAGGTTTTAGA+GGG	+	chr7_3:230674-230693	Msa1087510:intron	35.0%
!!!	GATTTTGGAAGGTTTTAGAG+GGG	+	chr7_3:230675-230694	Msa1087510:intron	35.0%
!	AGAGGAGTATACCAAATTGA+GGG	-	chr7_3:230924-230943	None:intergenic	35.0%
!	AAGAGGAGTATACCAAATTG+AGG	-	chr7_3:230925-230944	None:intergenic	35.0%
	TTGGAATGCAATCATTAGAC+GGG	-	chr7_3:231040-231059	None:intergenic	35.0%
	TTTGTGTAATCACTCATCCA+TGG	+	chr7_3:231076-231095	Msa1087510:intron	35.0%
	GAAAAATCCAACCTGGAATA+GGG	-	chr7_3:231278-231297	None:intergenic	35.0%
	TGAAAAATCCAACCTGGAAT+AGG	-	chr7_3:231279-231298	None:intergenic	35.0%
	AAGGGAAAACTAGAAAGTCA+AGG	-	chr7_3:231322-231341	None:intergenic	35.0%
	TAGAATTGCACCCCAAAAAA+GGG	-	chr7_3:231340-231359	None:intergenic	35.0%
	ATAGAATTGCACCCCAAAAA+AGG	-	chr7_3:231341-231360	None:intergenic	35.0%
	TCCTATTTGAATGCTCTTTG+GGG	+	chr7_3:231375-231394	Msa1087510:intron	35.0%
	GATAATTATACACGGGAAAG+TGG	-	chr7_3:231592-231611	None:intergenic	35.0%
	AACATAATGAGCATAACGCA+GGG	-	chr7_3:231684-231703	None:intergenic	35.0%
	AAACATAATGAGCATAACGC+AGG	-	chr7_3:231685-231704	None:intergenic	35.0%
	TTGCCAGAGATTCTGATTAT+TGG	+	chr7_3:231774-231793	Msa1087510:intron	35.0%
	ATGTTGATCCTGAACTTAGA+CGG	+	chr7_3:231817-231836	Msa1087510:CDS	35.0%
	CTGAACTTAGACGGTTTATT+CGG	+	chr7_3:231826-231845	Msa1087510:CDS	35.0%
	CCCATATCAAAGAGGTTAAA+TGG	-	chr7_3:232063-232082	None:intergenic	35.0%
	CTTAAAGTCCCATATCAAAG+AGG	-	chr7_3:232071-232090	None:intergenic	35.0%
!	ATGGGACTTTAAGAAAATGG+AGG	+	chr7_3:232078-232097	Msa1087510:intron	35.0%
	GTTGAAAAGGTGATTTCGAA+TGG	+	chr7_3:232148-232167	Msa1087510:intron	35.0%
	TTCGAATGGTGAGAAAATGA+AGG	+	chr7_3:232162-232181	Msa1087510:intron	35.0%
	CATGGCAACATATAATTGGA+TGG	+	chr7_3:232361-232380	Msa1087510:intron	35.0%
!	GAGTTGTGTTATTATAGTCC+TGG	+	chr7_3:232418-232437	Msa1087510:intron	35.0%
!!	GGTTTCTAGCTTGTAACATT+CGG	-	chr7_3:232778-232797	None:intergenic	35.0%
	GCAGTGATCATAATTATGGT+TGG	-	chr7_3:232799-232818	None:intergenic	35.0%
	ACTGGCAGTGATCATAATTA+TGG	-	chr7_3:232803-232822	None:intergenic	35.0%
	CTTCATGAAGTAACTCCATA+TGG	-	chr7_3:232970-232989	None:intergenic	35.0%
	TGAAATCTTGCGTAAATCTG+CGG	+	chr7_3:233049-233068	Msa1087510:three_prime_UTR	35.0%
	CTCATAAATCCAAGCAAAGT+TGG	+	chr7_3:233211-233230	Msa1087510:three_prime_UTR	35.0%
!!!	AAGCAAAGTTGGCTTTTCTA+GGG	+	chr7_3:233222-233241	Msa1087510:three_prime_UTR	35.0%
	GTCACAACTCTAACAAAATG+AGG	-	chr7_3:233282-233301	None:intergenic	35.0%
!!	CTTGTTGTGTTGTTTCTGGA+TGG	-	chr7_3:229158-229177	None:intergenic	40.0%
	ACAACACAACAAGAAGTTCG+TGG	+	chr7_3:229165-229184	Msa1087510:five_prime_UTR	40.0%
	CAACACAACAAGAAGTTCGT+GGG	+	chr7_3:229166-229185	Msa1087510:five_prime_UTR	40.0%
	AACAAGAAGTTCGTGGGTTT+GGG	+	chr7_3:229172-229191	Msa1087510:five_prime_UTR	40.0%
	GGATGATTGTTATGTGGAGA+AGG	-	chr7_3:229312-229331	None:intergenic	40.0%
!!	TTGAAAACGGAGTTGGTCTT+CGG	-	chr7_3:229403-229422	None:intergenic	40.0%
!	AAGACCAACTCCGTTTTCAA+GGG	+	chr7_3:229403-229422	Msa1087510:CDS	40.0%
	AGAGTAGGTACCCTTGAAAA+CGG	-	chr7_3:229416-229435	None:intergenic	40.0%
	TGGAATGAAAGGAAGAGAGT+AGG	-	chr7_3:229431-229450	None:intergenic	40.0%
	ATTGTTTCGATATGGGGTCA+AGG	+	chr7_3:229660-229679	Msa1087510:intron	40.0%
	TTATCGGCAATAGTTGTTGC+TGG	+	chr7_3:229757-229776	Msa1087510:intron	40.0%
	TATCGGCAATAGTTGTTGCT+GGG	+	chr7_3:229758-229777	Msa1087510:intron	40.0%
!	GAAGGAAGTTTGCTTTGTGT+TGG	+	chr7_3:229853-229872	Msa1087510:CDS	40.0%
	TTTCAGAGATCACTGCTGAT+AGG	+	chr7_3:229908-229927	Msa1087510:CDS	40.0%
!	TAATCAAGCCTTTTCGCAGT+AGG	+	chr7_3:230148-230167	Msa1087510:intron	40.0%
	TAACTACACCTACTGCGAAA+AGG	-	chr7_3:230159-230178	None:intergenic	40.0%
	TGCCGCTAAGAAGTTTAAAG+TGG	+	chr7_3:230302-230321	Msa1087510:intron	40.0%
!	CTTAAGAGTTTGTTTGGGAG+GGG	+	chr7_3:230653-230672	Msa1087510:intron	40.0%
!!	GGGATTTTGGAAGGTTTTAG+AGG	+	chr7_3:230673-230692	Msa1087510:intron	40.0%
	TTAGAGGTGAGGAAGACTAA+TGG	-	chr7_3:230890-230909	None:intergenic	40.0%
	TCTTCCTCACCTCTAACTAT+TGG	+	chr7_3:230894-230913	Msa1087510:intron	40.0%
	TAGTCCAATAGTTAGAGGTG+AGG	-	chr7_3:230901-230920	None:intergenic	40.0%
	CTATTGGACTACCCTCAATT+TGG	+	chr7_3:230910-230929	Msa1087510:intron	40.0%
!!	TTAGAAGTACTGGTGGTAAG+AGG	-	chr7_3:230942-230961	None:intergenic	40.0%
	CTTACCACCAGTACTTCTAA+AGG	+	chr7_3:230942-230961	Msa1087510:intron	40.0%
!!	AGTACCTTTAGAAGTACTGG+TGG	-	chr7_3:230949-230968	None:intergenic	40.0%
	GCAATCATTAGACGGGAAAT+TGG	-	chr7_3:231033-231052	None:intergenic	40.0%
	CAAAGCTGAAAAATCCAACC+TGG	-	chr7_3:231285-231304	None:intergenic	40.0%
	ATAAGTTAGGACCCTAAAGC+TGG	+	chr7_3:231513-231532	Msa1087510:intron	40.0%
	GAATCCCAATGTCACGAATA+TGG	+	chr7_3:231539-231558	Msa1087510:intron	40.0%
	CAGCCAATAATCAGAATCTC+TGG	-	chr7_3:231780-231799	None:intergenic	40.0%
!	GAGATTCTGATTATTGGCTG+TGG	+	chr7_3:231780-231799	Msa1087510:intron	40.0%
!	TTCTGATTATTGGCTGTGGA+AGG	+	chr7_3:231784-231803	Msa1087510:CDS	40.0%
	CGAATAAACCGTCTAAGTTC+AGG	-	chr7_3:231828-231847	None:intergenic	40.0%
!	GAAGTTAGAAGCTGTTGACT+CGG	+	chr7_3:231860-231879	Msa1087510:CDS	40.0%
	AAAACAGTACATGGTACCTC+AGG	+	chr7_3:232011-232030	Msa1087510:intron	40.0%
!!	GTCTGAAATTCGGGTTGAAA+AGG	+	chr7_3:232135-232154	Msa1087510:intron	40.0%
	AAATGAAGAAGGTCGCATTG+TGG	+	chr7_3:232930-232949	Msa1087510:CDS	40.0%
	AACTCCATATGGAAGAAGTG+CGG	-	chr7_3:232959-232978	None:intergenic	40.0%
	TGGAGTTACTTCATGAAGCT+TGG	+	chr7_3:232972-232991	Msa1087510:exon	40.0%
	GAGCATATTTGAACAAAGGG+TGG	-	chr7_3:233015-233034	None:intergenic	40.0%
	CTAGAAAAGCCAACTTTGCT+TGG	-	chr7_3:233223-233242	None:intergenic	40.0%
!!!	CAAGCAAAGTTGGCTTTTCT+AGG	+	chr7_3:233221-233240	Msa1087510:three_prime_UTR	40.0%
!!!	AGCAAAGTTGGCTTTTCTAG+GGG	+	chr7_3:233223-233242	Msa1087510:three_prime_UTR	40.0%
	CAACAAGAAGTTCGTGGGTT+TGG	+	chr7_3:229171-229190	Msa1087510:five_prime_UTR	45.0%
	ACAAGAAGTTCGTGGGTTTG+GGG	+	chr7_3:229173-229192	Msa1087510:five_prime_UTR	45.0%
!!	GAAGGTTTGTTGAGCTTGAG+AGG	-	chr7_3:229294-229313	None:intergenic	45.0%
!	CGTATAAAGAGAAAGCGCGA+CGG	-	chr7_3:229353-229372	None:intergenic	45.0%
!!	TGAAAACGGAGTTGGTCTTC+GGG	-	chr7_3:229402-229421	None:intergenic	45.0%
!	GAAGACCAACTCCGTTTTCA+AGG	+	chr7_3:229402-229421	Msa1087510:CDS	45.0%
	ACTCCTTAACTAGTGCCCTT+AGG	+	chr7_3:230416-230435	Msa1087510:intron	45.0%
	CTCCTTAACTAGTGCCCTTA+GGG	+	chr7_3:230417-230436	Msa1087510:intron	45.0%
!	GTTTGTTTGGGAGGGGATTT+TGG	+	chr7_3:230660-230679	Msa1087510:intron	45.0%
!!!	TTTGGAAGGTTTTAGAGGGG+AGG	+	chr7_3:230678-230697	Msa1087510:intron	45.0%
!!!	TTGGAAGGTTTTAGAGGGGA+GGG	+	chr7_3:230679-230698	Msa1087510:intron	45.0%
	TGAGGAAGACTAATGGAAGG+GGG	-	chr7_3:230883-230902	None:intergenic	45.0%
	GTGAGGAAGACTAATGGAAG+GGG	-	chr7_3:230884-230903	None:intergenic	45.0%
	GGTGAGGAAGACTAATGGAA+GGG	-	chr7_3:230885-230904	None:intergenic	45.0%
	AGGTGAGGAAGACTAATGGA+AGG	-	chr7_3:230886-230905	None:intergenic	45.0%
	GAGGGTAGTCCAATAGTTAG+AGG	-	chr7_3:230906-230925	None:intergenic	45.0%
	CTACTATCTTCTCTACCGTG+AGG	+	chr7_3:231003-231022	Msa1087510:intron	45.0%
	AAATCCAACCTGGAATAGGG+CGG	-	chr7_3:231275-231294	None:intergenic	45.0%
!!	GCCCCAAAGAGCATTCAAAT+AGG	-	chr7_3:231379-231398	None:intergenic	45.0%
	TGGGATTCTCACCAGCTTTA+GGG	-	chr7_3:231527-231546	None:intergenic	45.0%
	TTGGGATTCTCACCAGCTTT+AGG	-	chr7_3:231528-231547	None:intergenic	45.0%
	CAGTAATCCAAGAGAGAGAG+AGG	-	chr7_3:231626-231645	None:intergenic	45.0%
	AGACGGTTTATTCGGTCTAC+TGG	+	chr7_3:231834-231853	Msa1087510:CDS	45.0%
	TACATGGTACCTCAGGACAT+TGG	+	chr7_3:232018-232037	Msa1087510:intron	45.0%
!	CAGACACTGGCTGGTATTAA+AGG	-	chr7_3:232120-232139	None:intergenic	45.0%
!	ACCAGCCAGTGTCTGAAATT+CGG	+	chr7_3:232125-232144	Msa1087510:intron	45.0%
	TCAACCCGAATTTCAGACAC+TGG	-	chr7_3:232133-232152	None:intergenic	45.0%
	TAGTCCTGGGTATCACTCTA+AGG	+	chr7_3:232432-232451	Msa1087510:intron	45.0%
!!	CTGGGTATCACTCTAAGGTT+GGG	+	chr7_3:232437-232456	Msa1087510:intron	45.0%
!	AGGGTGGCTACTAAGAGTAT+AGG	-	chr7_3:232999-233018	None:intergenic	45.0%
!!!	GCAAAGTTGGCTTTTCTAGG+GGG	+	chr7_3:233224-233243	Msa1087510:three_prime_UTR	45.0%
	TGTTTAACATCCCCAAGGGA+GGG	-	chr7_3:233365-233384	None:intergenic	45.0%
	ATGTTTAACATCCCCAAGGG+AGG	-	chr7_3:233366-233385	None:intergenic	45.0%
!!!	ATTTTTTTATTTAATGTAAT+GGG	+	chr7_3:229709-229728	Msa1087510:intron	5.0%
!!	GTGTTGTTTCTGGATGGGTC+AGG	-	chr7_3:229152-229171	None:intergenic	50.0%
	CGGAGATTGCGTATGAGGTT+TGG	-	chr7_3:229261-229280	None:intergenic	50.0%
	GCTTGAGAGGTTGTTCGTTG+CGG	-	chr7_3:229281-229300	None:intergenic	50.0%
!!	GAAAACGGAGTTGGTCTTCG+GGG	-	chr7_3:229401-229420	None:intergenic	50.0%
	GGTACCCTTGAAAACGGAGT+TGG	-	chr7_3:229410-229429	None:intergenic	50.0%
	GATATGGGGTCAAGGAAGAG+AGG	+	chr7_3:229668-229687	Msa1087510:intron	50.0%
!!	TGCCCTAAGGGCACTAGTTA+AGG	-	chr7_3:230422-230441	None:intergenic	50.0%
!	GTTTGGGAGGGGATTTTGGA+AGG	+	chr7_3:230664-230683	Msa1087510:intron	50.0%
!!!	GGTTTTAGAGGGGAGGGTTT+TGG	+	chr7_3:230685-230704	Msa1087510:intron	50.0%
!!	TTTAGAGGGGAGGGTTTTGG+AGG	+	chr7_3:230688-230707	Msa1087510:intron	50.0%
!!!	TTAGAGGGGAGGGTTTTGGA+GGG	+	chr7_3:230689-230708	Msa1087510:intron	50.0%
	AATGGAAGGGGGGTTTCAGA+CGG	-	chr7_3:230872-230891	None:intergenic	50.0%
	GAGGAAGACTAATGGAAGGG+GGG	-	chr7_3:230882-230901	None:intergenic	50.0%
	CGGGAAATTGGATAGCCTCA+CGG	-	chr7_3:231021-231040	None:intergenic	50.0%
	CAAATTGTCCGCCCTATTCC+AGG	+	chr7_3:231264-231283	Msa1087510:CDS	50.0%
	CTACTGTCCTCTCTCTCTCT+TGG	+	chr7_3:231616-231635	Msa1087510:intron	50.0%
	ACCTCAGGACATTGGTACAG+AGG	+	chr7_3:232026-232045	Msa1087510:intron	50.0%
	CCTCAGGACATTGGTACAGA+GGG	+	chr7_3:232027-232046	Msa1087510:intron	50.0%
	CTCAGGACATTGGTACAGAG+GGG	+	chr7_3:232028-232047	Msa1087510:intron	50.0%
	TCAGGACATTGGTACAGAGG+GGG	+	chr7_3:232029-232048	Msa1087510:intron	50.0%
	ACATTGGTACAGAGGGGGAA+TGG	+	chr7_3:232034-232053	Msa1087510:intron	50.0%
	CATTGGTACAGAGGGGGAAT+GGG	+	chr7_3:232035-232054	Msa1087510:intron	50.0%
!	CCAGCCAGTGTCTGAAATTC+GGG	+	chr7_3:232126-232145	Msa1087510:intron	50.0%
	CCAACCTTAGAGTGATACCC+AGG	-	chr7_3:232439-232458	None:intergenic	50.0%
!!	CCTGGGTATCACTCTAAGGT+TGG	+	chr7_3:232436-232455	Msa1087510:intron	50.0%
!!	TTGGCTTTTCTAGGGGGTAG+TGG	+	chr7_3:233230-233249	Msa1087510:three_prime_UTR	50.0%
!	TCTAGGGGGTAGTGGTTGTT+TGG	+	chr7_3:233238-233257	Msa1087510:three_prime_UTR	50.0%
	TTTAACATCCCCAAGGGAGG+GGG	-	chr7_3:233363-233382	None:intergenic	50.0%
	GTTTAACATCCCCAAGGGAG+GGG	-	chr7_3:233364-233383	None:intergenic	50.0%
	CGTTGCGGAGATTGCGTATG+AGG	-	chr7_3:229266-229285	None:intergenic	55.0%
	CGGAGAGAGGGCAAGGAATT+GGG	-	chr7_3:229333-229352	None:intergenic	55.0%
	ACGGAGAGAGGGCAAGGAAT+TGG	-	chr7_3:229334-229353	None:intergenic	55.0%
	ACTAGTGCCCTTAGGGCACA+AGG	+	chr7_3:230424-230443	Msa1087510:intron	55.0%
	CTAGTGCCCTTAGGGCACAA+GGG	+	chr7_3:230425-230444	Msa1087510:intron	55.0%
	CAAGTGCCCTTGTGCCCTAA+GGG	-	chr7_3:230434-230453	None:intergenic	55.0%
	ACAAGTGCCCTTGTGCCCTA+AGG	-	chr7_3:230435-230454	None:intergenic	55.0%
	ATGGAAGGGGGGTTTCAGAC+GGG	-	chr7_3:230871-230890	None:intergenic	55.0%
	TTGTCCGCCCTATTCCAGGT+TGG	+	chr7_3:231268-231287	Msa1087510:intron	55.0%
	CCCTCTGTACCAATGTCCTG+AGG	-	chr7_3:232030-232049	None:intergenic	55.0%
	CCCGAATTTCAGACACTGGC+TGG	-	chr7_3:232129-232148	None:intergenic	55.0%
	GCTGCCGCACTTCTTCCATA+TGG	+	chr7_3:232952-232971	Msa1087510:CDS	55.0%
	TTAACATCCCCAAGGGAGGG+GGG	-	chr7_3:233362-233381	None:intergenic	55.0%
!	GAGAAAGCGCGACGGAGAGA+GGG	-	chr7_3:229345-229364	None:intergenic	60.0%
!	AGAGAAAGCGCGACGGAGAG+AGG	-	chr7_3:229346-229365	None:intergenic	60.0%
	AAGGGGGGTTTCAGACGGGA+GGG	-	chr7_3:230867-230886	None:intergenic	60.0%
	GAAGGGGGGTTTCAGACGGG+AGG	-	chr7_3:230868-230887	None:intergenic	65.0%
	AGCGCGACGGAGAGAGGGCA+AGG	-	chr7_3:229340-229359	None:intergenic	70.0%
	AGAACCCTGCCCCCCTCCCT+TGG	+	chr7_3:233350-233369	Msa1087510:three_prime_UTR	70.0%
	GAACCCTGCCCCCCTCCCTT+GGG	+	chr7_3:233351-233370	Msa1087510:three_prime_UTR	70.0%
	AACCCTGCCCCCCTCCCTTG+GGG	+	chr7_3:233352-233371	Msa1087510:three_prime_UTR	70.0%
	ATCCCCAAGGGAGGGGGGCA+GGG	-	chr7_3:233357-233376	None:intergenic	70.0%
	CATCCCCAAGGGAGGGGGGC+AGG	-	chr7_3:233358-233377	None:intergenic	75.0%

Chromosome	Type	Strat	End	Strand	Name
chr7_3	gene	229127	233517	229127	ID=Msa1087510;Name=Msa1087510
chr7_3	mRNA	229127	233517	229127	ID=Msa1087510-mRNA-1;Parent=Msa1087510;Name=Msa1087510-mRNA-1;_AED=0.05;_eAED=0.05;_QI=98\|1\|1\|1\|0.75\|1\|5\|530\|179
chr7_3	exon	229127	229424	229127	ID=Msa1087510-mRNA-1:exon:82;Parent=Msa1087510-mRNA-1
chr7_3	exon	229813	229929	229813	ID=Msa1087510-mRNA-1:exon:83;Parent=Msa1087510-mRNA-1
chr7_3	exon	231251	231285	231251	ID=Msa1087510-mRNA-1:exon:84;Parent=Msa1087510-mRNA-1
chr7_3	exon	231781	231881	231781	ID=Msa1087510-mRNA-1:exon:85;Parent=Msa1087510-mRNA-1
chr7_3	exon	232901	233517	232901	ID=Msa1087510-mRNA-1:exon:86;Parent=Msa1087510-mRNA-1
chr7_3	five_prime_UTR	229127	229224	229127	ID=Msa1087510-mRNA-1:five_prime_utr;Parent=Msa1087510-mRNA-1
chr7_3	CDS	229225	229424	229225	ID=Msa1087510-mRNA-1:cds;Parent=Msa1087510-mRNA-1
chr7_3	CDS	229813	229929	229813	ID=Msa1087510-mRNA-1:cds;Parent=Msa1087510-mRNA-1
chr7_3	CDS	231251	231285	231251	ID=Msa1087510-mRNA-1:cds;Parent=Msa1087510-mRNA-1
chr7_3	CDS	231781	231881	231781	ID=Msa1087510-mRNA-1:cds;Parent=Msa1087510-mRNA-1
chr7_3	CDS	232901	232987	232901	ID=Msa1087510-mRNA-1:cds;Parent=Msa1087510-mRNA-1
chr7_3	three_prime_UTR	232988	233517	232988	ID=Msa1087510-mRNA-1:three_prime_utr;Parent=Msa1087510-mRNA-1

Gene Sequence

>Msa1087510

ATGGCTGTTCGTCAAAGAGCAGTAACAGCACTTCCAAACCTCATACGCAATCTCCGCAACGAACAACCTCTCAAGCTCAACAAACCTTCTCCACATAACAATCATCCCAATTCCTTGCCCTCTCTCCGTCGCGCTTTCTCTTTATACGATCAGATCAATCTCATTGACAATGTCCCCGAAGACCAACTCCGTTTTCAAGGGTTTAAAGATACTGGATTTACTGTAAATGGAGTTGAATATGAAGGAAGTTTGCTTTGTGTTGGAAATTTGATCATGTCTTGGAAACCAAACAAGTTTTCAGAGATCACTGCTGATAGCTTGTCACTCTTTCAAATTGTCCGCCCTATTCCAGAGATTCTGATTATTGGCTGTGGAAGGAGCATTCAACATGTTGATCCTGAACTTAGACGGTTTATTCGGTCTACTGGCATGAAGTTAGAAGCTGTTGACTCGAGAAATGCAGCATCAACTTACAACATACTAAATGAAGAAGGTCGCATTGTGGCTGCCGCACTTCTTCCATATGGAGTTACTTCATGA

Protein sequence

>Msa1087510

MAVRQRAVTALPNLIRNLRNEQPLKLNKPSPHNNHPNSLPSLRRAFSLYDQINLIDNVPEDQLRFQGFKDTGFTVNGVEYEGSLLCVGNLIMSWKPNKFSEITADSLSLFQIVRPIPEILIIGCGRSIQHVDPELRRFIRSTGMKLEAVDSRNAASTYNILNEEGRIVAAALLPYGVTS*