Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0037500 | sp|P46423|GSTF_HYOMU | 64.078 | 206 | 74 | 0 | 4 | 209 | 3 | 208 | 2.15e-97 | 285 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012820 | Msa0037500 | 0.811077 | 8.385823e-51 | -8.615850e-47 |
| Msa0037500 | Msa0059880 | 0.820912 | 5.337627e-53 | -8.615850e-47 |
| Msa0037500 | Msa0061600 | 0.827441 | 1.561757e-54 | -8.615850e-47 |
| Msa0037500 | Msa0101170 | 0.816158 | 6.386835e-52 | -8.615850e-47 |
| Msa0037500 | Msa0104360 | -0.805632 | 1.215707e-49 | -8.615850e-47 |
| Msa0037500 | Msa0106110 | 0.809838 | 1.552461e-50 | -8.615850e-47 |
| Msa0037500 | Msa0106120 | 0.809199 | 2.129561e-50 | -8.615850e-47 |
| Msa0037500 | Msa0106130 | 0.805858 | 1.089780e-49 | -8.615850e-47 |
| Msa0037500 | Msa0129150 | 0.907652 | 4.019049e-81 | -8.615850e-47 |
| Msa0037500 | Msa0152740 | 0.864437 | 1.216910e-64 | -8.615850e-47 |
| Msa0037500 | Msa0154240 | -0.802428 | 5.637622e-49 | -8.615850e-47 |
| Msa0037500 | Msa0174960 | 0.920589 | 1.057263e-87 | -8.615850e-47 |
| Msa0037500 | Msa0264940 | 0.803441 | 3.480381e-49 | -8.615850e-47 |
| Msa0037500 | Msa0302990 | 0.804546 | 2.051110e-49 | -8.615850e-47 |
| Msa0037500 | Msa0491760 | 0.806351 | 8.581600e-50 | -8.615850e-47 |
| Msa0037500 | Msa0735280 | 0.824882 | 6.342224e-54 | -8.615850e-47 |
| Msa0037500 | Msa0789900 | 0.830792 | 2.405968e-55 | -8.615850e-47 |
| Msa0037500 | Msa0791300 | 0.801401 | 9.160610e-49 | -8.615850e-47 |
| Msa0037500 | Msa0854840 | 0.804531 | 2.065680e-49 | -8.615850e-47 |
| Msa0037500 | Msa0882880 | 0.805812 | 1.114305e-49 | -8.615850e-47 |
| Msa0037500 | Msa0948050 | 0.838155 | 3.401016e-57 | -8.615850e-47 |
| Msa0037500 | Msa0984460 | 0.836078 | 1.155486e-56 | -8.615850e-47 |
| Msa0037500 | Msa1207480 | 0.806220 | 9.141934e-50 | -8.615850e-47 |
| Msa0037500 | Msa1216600 | 0.802951 | 4.397565e-49 | -8.615850e-47 |
| Msa0037500 | Msa1323030 | 0.811019 | 8.628784e-51 | -8.615850e-47 |
| Msa0037500 | Msa1323160 | 0.805424 | 1.344081e-49 | -8.615850e-47 |
| Msa0037500 | Msa1407670 | 0.811084 | 8.353191e-51 | -8.615850e-47 |
| Msa0037500 | Msa1420020 | 0.806031 | 1.002076e-49 | -8.615850e-47 |
| Msa0037500 | Msa1421120 | 0.806023 | 1.005813e-49 | -8.615850e-47 |
| Msa0037500 | Msa1449770 | 0.804952 | 1.687614e-49 | -8.615850e-47 |
| Msa0037500 | Msa1460310 | 0.804345 | 2.258843e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0037500 | MtrunA17_Chr1g0195821 | 94.393 | 214 | 12 | 0 | 1 | 214 | 1 | 214 | 4.36e-151 | 418 |
| Msa0037500 | MtrunA17_Chr1g0195811 | 90.187 | 214 | 21 | 0 | 1 | 214 | 1 | 214 | 9.67e-146 | 404 |
| Msa0037500 | MtrunA17_Chr3g0109891 | 43.478 | 207 | 116 | 1 | 3 | 208 | 2 | 208 | 1.32e-57 | 181 |
| Msa0037500 | MtrunA17_Chr1g0195831 | 39.904 | 208 | 124 | 1 | 4 | 210 | 3 | 210 | 3.73e-56 | 177 |
| Msa0037500 | MtrunA17_Chr3g0095781 | 41.429 | 210 | 121 | 2 | 3 | 211 | 2 | 210 | 1.45e-55 | 176 |
| Msa0037500 | MtrunA17_Chr1g0157211 | 41.364 | 220 | 122 | 4 | 1 | 213 | 1 | 220 | 1.02e-54 | 174 |
| Msa0037500 | MtrunA17_Chr5g0442751 | 41.429 | 210 | 118 | 4 | 3 | 209 | 2 | 209 | 4.03e-52 | 167 |
| Msa0037500 | MtrunA17_Chr5g0442741 | 38.863 | 211 | 126 | 3 | 3 | 211 | 2 | 211 | 4.28e-50 | 162 |
| Msa0037500 | MtrunA17_Chr3g0095821 | 44.512 | 164 | 90 | 1 | 49 | 211 | 1 | 164 | 1.04e-46 | 152 |
| Msa0037500 | MtrunA17_Chr1g0198101 | 88.235 | 68 | 8 | 0 | 147 | 214 | 1 | 68 | 1.66e-39 | 130 |
| Msa0037500 | MtrunA17_Chr8g0386711 | 27.397 | 146 | 106 | 0 | 4 | 149 | 3 | 148 | 2.24e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0037500 | AT1G02920.1 | 60.766 | 209 | 82 | 0 | 1 | 209 | 1 | 209 | 1.10e-87 | 258 |
| Msa0037500 | AT1G02930.2 | 59.809 | 209 | 83 | 1 | 1 | 209 | 1 | 208 | 3.69e-87 | 256 |
| Msa0037500 | AT1G02930.1 | 59.809 | 209 | 83 | 1 | 1 | 209 | 1 | 208 | 3.69e-87 | 256 |
| Msa0037500 | AT2G02930.1 | 59.434 | 212 | 83 | 1 | 1 | 209 | 1 | 212 | 8.97e-87 | 255 |
| Msa0037500 | AT4G02520.1 | 58.294 | 211 | 85 | 1 | 1 | 208 | 1 | 211 | 3.12e-86 | 254 |
| Msa0037500 | AT2G47730.2 | 56.585 | 205 | 88 | 1 | 6 | 209 | 54 | 258 | 4.11e-85 | 253 |
| Msa0037500 | AT2G47730.1 | 56.585 | 205 | 88 | 1 | 6 | 209 | 54 | 258 | 4.11e-85 | 253 |
| Msa0037500 | AT1G02950.2 | 52.427 | 206 | 97 | 1 | 1 | 205 | 24 | 229 | 2.68e-78 | 235 |
| Msa0037500 | AT1G02950.3 | 52.970 | 202 | 94 | 1 | 5 | 205 | 26 | 227 | 7.49e-78 | 234 |
| Msa0037500 | AT1G02950.1 | 52.970 | 202 | 94 | 1 | 5 | 205 | 26 | 227 | 7.49e-78 | 234 |
| Msa0037500 | AT1G02950.5 | 52.970 | 202 | 94 | 1 | 5 | 205 | 38 | 239 | 7.85e-78 | 234 |
| Msa0037500 | AT1G02940.4 | 46.602 | 206 | 109 | 1 | 5 | 209 | 40 | 245 | 3.15e-67 | 207 |
| Msa0037500 | AT1G02940.1 | 46.602 | 206 | 109 | 1 | 5 | 209 | 40 | 245 | 3.15e-67 | 207 |
| Msa0037500 | AT1G02940.3 | 46.602 | 206 | 109 | 1 | 5 | 209 | 53 | 258 | 4.16e-67 | 207 |
| Msa0037500 | AT1G02940.2 | 46.602 | 206 | 109 | 1 | 5 | 209 | 65 | 270 | 5.61e-67 | 207 |
| Msa0037500 | AT3G62760.1 | 46.117 | 206 | 110 | 1 | 4 | 208 | 3 | 208 | 1.67e-61 | 191 |
| Msa0037500 | AT1G49860.1 | 47.692 | 195 | 98 | 2 | 21 | 211 | 22 | 216 | 3.70e-57 | 181 |
| Msa0037500 | AT3G03190.1 | 42.857 | 210 | 119 | 1 | 3 | 211 | 2 | 211 | 1.22e-54 | 174 |
| Msa0037500 | AT5G17220.1 | 38.095 | 210 | 129 | 1 | 3 | 211 | 2 | 211 | 7.24e-51 | 164 |
| Msa0037500 | AT2G30860.1 | 37.799 | 209 | 128 | 2 | 3 | 210 | 2 | 209 | 1.65e-47 | 155 |
| Msa0037500 | AT2G30870.1 | 37.438 | 203 | 126 | 1 | 9 | 210 | 7 | 209 | 1.04e-45 | 151 |
| Msa0037500 | AT1G02950.4 | 48.592 | 142 | 72 | 1 | 65 | 205 | 60 | 201 | 2.65e-45 | 150 |
| Msa0037500 | AT2G30860.2 | 35.948 | 153 | 97 | 1 | 3 | 155 | 2 | 153 | 8.05e-30 | 108 |
Find 53 sgRNAs with CRISPR-Local
Find 446 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGGGGATCAAGACTTTATT+TGG | 0.154529 | 1_1:-66512345 | Msa0037500:CDS |
| ACTCATTATTGCCATCTTCT+TGG | 0.252577 | 1_1:+66512428 | None:intergenic |
| TCAAAACTTGTTTGGGAATT+GGG | 0.267427 | 1_1:-66512363 | Msa0037500:CDS |
| ATCAAAACTTGTTTGGGAAT+TGG | 0.277142 | 1_1:-66512364 | Msa0037500:CDS |
| GATGGAGATTTAAAGCTCTT+TGG | 0.296201 | 1_1:-66513901 | Msa0037500:intron |
| GACTTTATTTGGAATTCCTT+TGG | 0.310575 | 1_1:-66512334 | Msa0037500:CDS |
| CGCATGGTGGCCGTTGAGAT+AGG | 0.336998 | 1_1:+66514162 | None:intergenic |
| AAGTAGCATCAAAACTTGTT+TGG | 0.348556 | 1_1:-66512371 | Msa0037500:CDS |
| GAGGAATGGTGAACACAAAA+AGG | 0.363061 | 1_1:-66514082 | Msa0037500:CDS |
| AGTAGCATCAAAACTTGTTT+GGG | 0.371553 | 1_1:-66512370 | Msa0037500:CDS |
| ATCTTTATGTTGCAGCCATT+TGG | 0.379956 | 1_1:-66513943 | Msa0037500:intron |
| GATCATGAGTATGCTGATAA+GGG | 0.387666 | 1_1:-66512474 | Msa0037500:CDS |
| TGATCATGAGTATGCTGATA+AGG | 0.403067 | 1_1:-66512475 | Msa0037500:CDS |
| CAAGACCTTATGTTAATGCT+TGG | 0.407435 | 1_1:-66512137 | Msa0037500:CDS |
| AAGACCTTATGTTAATGCTT+GGG | 0.420971 | 1_1:-66512136 | Msa0037500:CDS |
| AAGATATGTATGTAGTACTA+TGG | 0.426849 | 1_1:+66514219 | None:intergenic |
| AAATCTCCATCTTCAAAAGC+TGG | 0.446504 | 1_1:+66513913 | None:intergenic |
| ATGATCTTAATTAGGTATCA+TGG | 0.448138 | 1_1:+66512071 | None:intergenic |
| ATGCTACTTTATCGTAGTGT+AGG | 0.457201 | 1_1:+66512385 | None:intergenic |
| GCTTACATTGATTGATATGA+AGG | 0.465911 | 1_1:+66514056 | None:intergenic |
| CAAAACTTGTTTGGGAATTG+GGG | 0.475334 | 1_1:-66512362 | Msa0037500:CDS |
| AAAGCTGGAACTTGACCAAA+TGG | 0.480424 | 1_1:+66513928 | None:intergenic |
| TCCTTTGGATTCAAAAGTTG+TGG | 0.481662 | 1_1:-66512319 | Msa0037500:CDS |
| CATACATATCTTGTAAATCA+TGG | 0.498349 | 1_1:-66514208 | Msa0037500:exon |
| AATGAGTGTGTGGTCGGAAG+TGG | 0.508607 | 1_1:-66512412 | Msa0037500:CDS |
| AGGTGAGTGTTTCACCTTGG+TGG | 0.510447 | 1_1:-66512223 | Msa0037500:CDS |
| GCATGGTGGCCGTTGAGATA+GGG | 0.515923 | 1_1:+66514163 | None:intergenic |
| TCAACCCAAGCATTAACATA+AGG | 0.524477 | 1_1:+66512132 | None:intergenic |
| ATTGTCTGAATCTAAATACA+TGG | 0.527540 | 1_1:-66512247 | Msa0037500:CDS |
| ATCAAGAATGCTATCCAACT+TGG | 0.528639 | 1_1:+66512284 | None:intergenic |
| TATCTCAACGGCCACCATGC+GGG | 0.531171 | 1_1:-66514160 | Msa0037500:CDS |
| GGAAGAGAATGAAGCCAAGT+TGG | 0.538389 | 1_1:-66512298 | Msa0037500:CDS |
| AAAATTGAAATGCAGAGTCA+AGG | 0.547213 | 1_1:-66512515 | Msa0037500:intron |
| AAATTGAAATGCAGAGTCAA+GGG | 0.557402 | 1_1:-66512514 | Msa0037500:intron |
| TTCATCAAGTAGTGAAGAGA+AGG | 0.557567 | 1_1:+66512186 | None:intergenic |
| GTAAGCATTAACATGAGGAA+TGG | 0.557734 | 1_1:-66514096 | Msa0037500:CDS |
| AAGCAGTGACTCCAAGAAGA+TGG | 0.558112 | 1_1:-66512439 | Msa0037500:CDS |
| GCAAGTACTTTAGACCAAGC+TGG | 0.578209 | 1_1:+66512093 | None:intergenic |
| CTTACATTGATTGATATGAA+GGG | 0.578372 | 1_1:+66514057 | None:intergenic |
| GGCAATAATGAGTGTGTGGT+CGG | 0.583453 | 1_1:-66512418 | Msa0037500:CDS |
| ATATCACTGCAAGACCAGCT+TGG | 0.601324 | 1_1:-66512107 | Msa0037500:CDS |
| ATCATGAGTATGCTGATAAG+GGG | 0.611479 | 1_1:-66512473 | Msa0037500:CDS |
| GCACGGAAGCCCTATCTCAA+CGG | 0.620985 | 1_1:-66514172 | Msa0037500:CDS |
| CTATCTCAACGGCCACCATG+CGG | 0.624610 | 1_1:-66514161 | Msa0037500:CDS |
| AGTTTGTAAGCATTAACATG+AGG | 0.629431 | 1_1:-66514101 | Msa0037500:CDS |
| GGGAGGTGAGTGTTTCACCT+TGG | 0.632509 | 1_1:-66512226 | Msa0037500:CDS |
| ATGGCAACAATAAAAGTGCA+CGG | 0.649349 | 1_1:-66514189 | Msa0037500:CDS |
| TTGTCTGAATCTAAATACAT+GGG | 0.650116 | 1_1:-66512246 | Msa0037500:CDS |
| CAGAGTTGCAGTAACCCGCA+TGG | 0.653094 | 1_1:+66514146 | None:intergenic |
| TCTGAATCTAAATACATGGG+AGG | 0.678031 | 1_1:-66512243 | Msa0037500:CDS |
| AGTTGCAGTAACCCGCATGG+TGG | 0.707787 | 1_1:+66514149 | None:intergenic |
| TAAATGATGCAAATCCACCA+AGG | 0.710594 | 1_1:+66512209 | None:intergenic |
| AGATGGCAATAATGAGTGTG+TGG | 0.714038 | 1_1:-66512422 | Msa0037500:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAGTAATTTTATACATT+CGG | + | chr1_1:66512638-66512657 | None:intergenic | 10.0% |
| !! | TTATTAAAAAATATTCACTA+TGG | - | chr1_1:66513454-66513473 | Msa0037500:intron | 10.0% |
| !! | TATTAAAAAATATTCACTAT+GGG | - | chr1_1:66513455-66513474 | Msa0037500:intron | 10.0% |
| !!! | AAAAAGTAATTTTATACATT+CGG | + | chr1_1:66512638-66512657 | None:intergenic | 10.0% |
| !! | TTATTAAAAAATATTCACTA+TGG | - | chr1_1:66513454-66513473 | Msa0037500:intron | 10.0% |
| !! | TATTAAAAAATATTCACTAT+GGG | - | chr1_1:66513455-66513474 | Msa0037500:intron | 10.0% |
| !!! | AAAAGTAATTTTATACATTC+GGG | + | chr1_1:66512637-66512656 | None:intergenic | 15.0% |
| !!! | AAAAGTAATTTTATACATTC+GGG | + | chr1_1:66512637-66512656 | None:intergenic | 15.0% |
| !! | AACATAAAGATTGAATTAGT+TGG | + | chr1_1:66512306-66512325 | None:intergenic | 20.0% |
| !!! | TATTTCATAAAGTACTTAAG+TGG | + | chr1_1:66512836-66512855 | None:intergenic | 20.0% |
| !! | CAAAATTATGAATGAAAATG+AGG | + | chr1_1:66513284-66513303 | None:intergenic | 20.0% |
| !!! | TCATTATTGATGTTGTTATT+TGG | - | chr1_1:66513349-66513368 | Msa0037500:intron | 20.0% |
| !!! | TACCTAATTAAGATCATTTT+TGG | - | chr1_1:66514193-66514212 | Msa0037500:exon | 20.0% |
| !!! | ACCTAATTAAGATCATTTTT+GGG | - | chr1_1:66514194-66514213 | Msa0037500:exon | 20.0% |
| !! | AACATAAAGATTGAATTAGT+TGG | + | chr1_1:66512306-66512325 | None:intergenic | 20.0% |
| !!! | TATTTCATAAAGTACTTAAG+TGG | + | chr1_1:66512836-66512855 | None:intergenic | 20.0% |
| !! | CAAAATTATGAATGAAAATG+AGG | + | chr1_1:66513284-66513303 | None:intergenic | 20.0% |
| !!! | TCATTATTGATGTTGTTATT+TGG | - | chr1_1:66513349-66513368 | Msa0037500:intron | 20.0% |
| !!! | TACCTAATTAAGATCATTTT+TGG | - | chr1_1:66514193-66514212 | Msa0037500:exon | 20.0% |
| !!! | ACCTAATTAAGATCATTTTT+GGG | - | chr1_1:66514194-66514213 | Msa0037500:exon | 20.0% |
| ! | AAGATATGTATGTAGTACTA+TGG | + | chr1_1:66512042-66512061 | None:intergenic | 25.0% |
| ! | CATACATATCTTGTAAATCA+TGG | - | chr1_1:66512050-66512069 | Msa0037500:three_prime_UTR | 25.0% |
| !! | CTTACATTGATTGATATGAA+GGG | + | chr1_1:66512204-66512223 | None:intergenic | 25.0% |
| !! | TAATTTTATACATTCGGGTA+GGG | + | chr1_1:66512632-66512651 | None:intergenic | 25.0% |
| ! | GATACACAAGAACTATTATT+AGG | - | chr1_1:66513104-66513123 | Msa0037500:intron | 25.0% |
| ! | AAAAATATTCACTATGGGTA+CGG | - | chr1_1:66513460-66513479 | Msa0037500:intron | 25.0% |
| ! | ATTGTCTGAATCTAAATACA+TGG | - | chr1_1:66514011-66514030 | Msa0037500:intron | 25.0% |
| ! | TTGTCTGAATCTAAATACAT+GGG | - | chr1_1:66514012-66514031 | Msa0037500:intron | 25.0% |
| ! | ATGATCTTAATTAGGTATCA+TGG | + | chr1_1:66514190-66514209 | None:intergenic | 25.0% |
| ! | TCCCAAAAATGATCTTAATT+AGG | + | chr1_1:66514198-66514217 | None:intergenic | 25.0% |
| !!! | AAGATCATTTTTGGGATATT+TGG | - | chr1_1:66514202-66514221 | Msa0037500:exon | 25.0% |
| !!! | AGATCATTTTTGGGATATTT+GGG | - | chr1_1:66514203-66514222 | Msa0037500:exon | 25.0% |
| ! | AAGATATGTATGTAGTACTA+TGG | + | chr1_1:66512042-66512061 | None:intergenic | 25.0% |
| ! | CATACATATCTTGTAAATCA+TGG | - | chr1_1:66512050-66512069 | Msa0037500:three_prime_UTR | 25.0% |
| !! | CTTACATTGATTGATATGAA+GGG | + | chr1_1:66512204-66512223 | None:intergenic | 25.0% |
| !! | TAATTTTATACATTCGGGTA+GGG | + | chr1_1:66512632-66512651 | None:intergenic | 25.0% |
| ! | GATACACAAGAACTATTATT+AGG | - | chr1_1:66513104-66513123 | Msa0037500:intron | 25.0% |
| ! | AAAAATATTCACTATGGGTA+CGG | - | chr1_1:66513460-66513479 | Msa0037500:intron | 25.0% |
| ! | ATTGTCTGAATCTAAATACA+TGG | - | chr1_1:66514011-66514030 | Msa0037500:intron | 25.0% |
| ! | TTGTCTGAATCTAAATACAT+GGG | - | chr1_1:66514012-66514031 | Msa0037500:intron | 25.0% |
| ! | ATGATCTTAATTAGGTATCA+TGG | + | chr1_1:66514190-66514209 | None:intergenic | 25.0% |
| ! | TCCCAAAAATGATCTTAATT+AGG | + | chr1_1:66514198-66514217 | None:intergenic | 25.0% |
| !!! | AAGATCATTTTTGGGATATT+TGG | - | chr1_1:66514202-66514221 | Msa0037500:exon | 25.0% |
| !!! | AGATCATTTTTGGGATATTT+GGG | - | chr1_1:66514203-66514222 | Msa0037500:exon | 25.0% |
| AGTTTGTAAGCATTAACATG+AGG | - | chr1_1:66512157-66512176 | Msa0037500:CDS | 30.0% | |
| ! | GCTTACATTGATTGATATGA+AGG | + | chr1_1:66512205-66512224 | None:intergenic | 30.0% |
| ATTAGTTGGATCAATGTAGT+TGG | + | chr1_1:66512292-66512311 | None:intergenic | 30.0% | |
| ! | GTAATTTTATACATTCGGGT+AGG | + | chr1_1:66512633-66512652 | None:intergenic | 30.0% |
| GATTCAAATTTACCTCTTTC+AGG | - | chr1_1:66512898-66512917 | Msa0037500:intron | 30.0% | |
| ! | AATTTACCTCTTTCAGGTAA+AGG | - | chr1_1:66512904-66512923 | Msa0037500:intron | 30.0% |
| ! | GCTTTTCTTTAAGTGACTTT+GGG | + | chr1_1:66513063-66513082 | None:intergenic | 30.0% |
| ! | TGCTTTTCTTTAAGTGACTT+TGG | + | chr1_1:66513064-66513083 | None:intergenic | 30.0% |
| AGAAGAGAATAGTGAAAGTA+AGG | + | chr1_1:66513218-66513237 | None:intergenic | 30.0% | |
| !! | TTCTTTGTTTCTGCTACTAT+TGG | - | chr1_1:66513418-66513437 | Msa0037500:intron | 30.0% |
| AAAATATTCACTATGGGTAC+GGG | - | chr1_1:66513461-66513480 | Msa0037500:intron | 30.0% | |
| !! | ATGGGTAAGTTTTTGAGAAT+AGG | - | chr1_1:66513563-66513582 | Msa0037500:intron | 30.0% |
| !! | TGGGTAAGTTTTTGAGAATA+GGG | - | chr1_1:66513564-66513583 | Msa0037500:intron | 30.0% |
| !! | AAGTTTTTGAGAATAGGGTA+TGG | - | chr1_1:66513569-66513588 | Msa0037500:intron | 30.0% |
| !! | AGTTTTTGAGAATAGGGTAT+GGG | - | chr1_1:66513570-66513589 | Msa0037500:intron | 30.0% |
| AAAATTGAAATGCAGAGTCA+AGG | - | chr1_1:66513743-66513762 | Msa0037500:intron | 30.0% | |
| AAATTGAAATGCAGAGTCAA+GGG | - | chr1_1:66513744-66513763 | Msa0037500:intron | 30.0% | |
| ! | AAGTAGCATCAAAACTTGTT+TGG | - | chr1_1:66513887-66513906 | Msa0037500:intron | 30.0% |
| ! | AGTAGCATCAAAACTTGTTT+GGG | - | chr1_1:66513888-66513907 | Msa0037500:intron | 30.0% |
| ! | ATCAAAACTTGTTTGGGAAT+TGG | - | chr1_1:66513894-66513913 | Msa0037500:intron | 30.0% |
| ! | TCAAAACTTGTTTGGGAATT+GGG | - | chr1_1:66513895-66513914 | Msa0037500:intron | 30.0% |
| ! | GACTTTATTTGGAATTCCTT+TGG | - | chr1_1:66513924-66513943 | Msa0037500:CDS | 30.0% |
| AAGACCTTATGTTAATGCTT+GGG | - | chr1_1:66514122-66514141 | Msa0037500:CDS | 30.0% | |
| !!! | GATATTTGGGTGTTGTTTTA+TGG | - | chr1_1:66514216-66514235 | Msa0037500:five_prime_UTR | 30.0% |
| AGTTTGTAAGCATTAACATG+AGG | - | chr1_1:66512157-66512176 | Msa0037500:CDS | 30.0% | |
| ! | GCTTACATTGATTGATATGA+AGG | + | chr1_1:66512205-66512224 | None:intergenic | 30.0% |
| ATTAGTTGGATCAATGTAGT+TGG | + | chr1_1:66512292-66512311 | None:intergenic | 30.0% | |
| ! | GTAATTTTATACATTCGGGT+AGG | + | chr1_1:66512633-66512652 | None:intergenic | 30.0% |
| GATTCAAATTTACCTCTTTC+AGG | - | chr1_1:66512898-66512917 | Msa0037500:intron | 30.0% | |
| ! | AATTTACCTCTTTCAGGTAA+AGG | - | chr1_1:66512904-66512923 | Msa0037500:intron | 30.0% |
| ! | GCTTTTCTTTAAGTGACTTT+GGG | + | chr1_1:66513063-66513082 | None:intergenic | 30.0% |
| ! | TGCTTTTCTTTAAGTGACTT+TGG | + | chr1_1:66513064-66513083 | None:intergenic | 30.0% |
| AGAAGAGAATAGTGAAAGTA+AGG | + | chr1_1:66513218-66513237 | None:intergenic | 30.0% | |
| !! | TTCTTTGTTTCTGCTACTAT+TGG | - | chr1_1:66513418-66513437 | Msa0037500:intron | 30.0% |
| AAAATATTCACTATGGGTAC+GGG | - | chr1_1:66513461-66513480 | Msa0037500:intron | 30.0% | |
| !! | ATGGGTAAGTTTTTGAGAAT+AGG | - | chr1_1:66513563-66513582 | Msa0037500:intron | 30.0% |
| !! | TGGGTAAGTTTTTGAGAATA+GGG | - | chr1_1:66513564-66513583 | Msa0037500:intron | 30.0% |
| !! | AAGTTTTTGAGAATAGGGTA+TGG | - | chr1_1:66513569-66513588 | Msa0037500:intron | 30.0% |
| !! | AGTTTTTGAGAATAGGGTAT+GGG | - | chr1_1:66513570-66513589 | Msa0037500:intron | 30.0% |
| AAAATTGAAATGCAGAGTCA+AGG | - | chr1_1:66513743-66513762 | Msa0037500:intron | 30.0% | |
| AAATTGAAATGCAGAGTCAA+GGG | - | chr1_1:66513744-66513763 | Msa0037500:intron | 30.0% | |
| ! | AAGTAGCATCAAAACTTGTT+TGG | - | chr1_1:66513887-66513906 | Msa0037500:intron | 30.0% |
| ! | AGTAGCATCAAAACTTGTTT+GGG | - | chr1_1:66513888-66513907 | Msa0037500:intron | 30.0% |
| ! | ATCAAAACTTGTTTGGGAAT+TGG | - | chr1_1:66513894-66513913 | Msa0037500:intron | 30.0% |
| ! | TCAAAACTTGTTTGGGAATT+GGG | - | chr1_1:66513895-66513914 | Msa0037500:intron | 30.0% |
| ! | GACTTTATTTGGAATTCCTT+TGG | - | chr1_1:66513924-66513943 | Msa0037500:CDS | 30.0% |
| AAGACCTTATGTTAATGCTT+GGG | - | chr1_1:66514122-66514141 | Msa0037500:CDS | 30.0% | |
| !!! | GATATTTGGGTGTTGTTTTA+TGG | - | chr1_1:66514216-66514235 | Msa0037500:five_prime_UTR | 30.0% |
| ! | ATGGCAACAATAAAAGTGCA+CGG | - | chr1_1:66512069-66512088 | Msa0037500:exon | 35.0% |
| GTAAGCATTAACATGAGGAA+TGG | - | chr1_1:66512162-66512181 | Msa0037500:CDS | 35.0% | |
| TCAATGTAGTTGGAACAAGA+AGG | + | chr1_1:66512282-66512301 | None:intergenic | 35.0% | |
| ATCTTTATGTTGCAGCCATT+TGG | - | chr1_1:66512315-66512334 | Msa0037500:CDS | 35.0% | |
| AAATCTCCATCTTCAAAAGC+TGG | + | chr1_1:66512348-66512367 | None:intergenic | 35.0% | |
| ! | GATGGAGATTTAAAGCTCTT+TGG | - | chr1_1:66512357-66512376 | Msa0037500:CDS | 35.0% |
| ATTTGATGTCTGACACGATT+AGG | - | chr1_1:66512435-66512454 | Msa0037500:CDS | 35.0% | |
| GGAGGAATGAAATAGATCTA+GGG | + | chr1_1:66512703-66512722 | None:intergenic | 35.0% | |
| TGGAGGAATGAAATAGATCT+AGG | + | chr1_1:66512704-66512723 | None:intergenic | 35.0% | |
| TGCAGAACAGAAAGCAATTT+CGG | + | chr1_1:66512736-66512755 | None:intergenic | 35.0% | |
| AGATTCCTTCTACAAACGTT+CGG | - | chr1_1:66512973-66512992 | Msa0037500:intron | 35.0% | |
| ATTAGGATTCAGTTTCCAGA+TGG | - | chr1_1:66513121-66513140 | Msa0037500:intron | 35.0% | |
| ! | TCTCTTCTTTTCCCCTTTAA+TGG | - | chr1_1:66513230-66513249 | Msa0037500:intron | 35.0% |
| ! | TTCTTTTCCCCTTTAATGGT+GGG | - | chr1_1:66513234-66513253 | Msa0037500:intron | 35.0% |
| TTCTACTGATGGTATTGCTT+TGG | - | chr1_1:66513387-66513406 | Msa0037500:intron | 35.0% | |
| TCTACTGATGGTATTGCTTT+GGG | - | chr1_1:66513388-66513407 | Msa0037500:intron | 35.0% | |
| AAATATTCACTATGGGTACG+GGG | - | chr1_1:66513462-66513481 | Msa0037500:intron | 35.0% | |
| ATTCAATTTCTCATTCCCGT+TGG | - | chr1_1:66513526-66513545 | Msa0037500:intron | 35.0% | |
| TTCAATTTCTCATTCCCGTT+GGG | - | chr1_1:66513527-66513546 | Msa0037500:intron | 35.0% | |
| !! | GTTTTTGAGAATAGGGTATG+GGG | - | chr1_1:66513571-66513590 | Msa0037500:intron | 35.0% |
| TGATCATGAGTATGCTGATA+AGG | - | chr1_1:66513783-66513802 | Msa0037500:intron | 35.0% | |
| GATCATGAGTATGCTGATAA+GGG | - | chr1_1:66513784-66513803 | Msa0037500:intron | 35.0% | |
| ATCATGAGTATGCTGATAAG+GGG | - | chr1_1:66513785-66513804 | Msa0037500:intron | 35.0% | |
| ACTCATTATTGCCATCTTCT+TGG | + | chr1_1:66513833-66513852 | None:intergenic | 35.0% | |
| !! | ATGCTACTTTATCGTAGTGT+AGG | + | chr1_1:66513876-66513895 | None:intergenic | 35.0% |
| ! | CAAAACTTGTTTGGGAATTG+GGG | - | chr1_1:66513896-66513915 | Msa0037500:intron | 35.0% |
| TTGGGGATCAAGACTTTATT+TGG | - | chr1_1:66513913-66513932 | Msa0037500:CDS | 35.0% | |
| TCCTTTGGATTCAAAAGTTG+TGG | - | chr1_1:66513939-66513958 | Msa0037500:intron | 35.0% | |
| ! | TCCACAACTTTTGAATCCAA+AGG | + | chr1_1:66513943-66513962 | None:intergenic | 35.0% |
| ATCAAGAATGCTATCCAACT+TGG | + | chr1_1:66513977-66513996 | None:intergenic | 35.0% | |
| TCTGAATCTAAATACATGGG+AGG | - | chr1_1:66514015-66514034 | Msa0037500:intron | 35.0% | |
| TAAATGATGCAAATCCACCA+AGG | + | chr1_1:66514052-66514071 | None:intergenic | 35.0% | |
| TTCATCAAGTAGTGAAGAGA+AGG | + | chr1_1:66514075-66514094 | None:intergenic | 35.0% | |
| CAAGACCTTATGTTAATGCT+TGG | - | chr1_1:66514121-66514140 | Msa0037500:CDS | 35.0% | |
| TCAACCCAAGCATTAACATA+AGG | + | chr1_1:66514129-66514148 | None:intergenic | 35.0% | |
| ! | ATGGCAACAATAAAAGTGCA+CGG | - | chr1_1:66512069-66512088 | Msa0037500:exon | 35.0% |
| GTAAGCATTAACATGAGGAA+TGG | - | chr1_1:66512162-66512181 | Msa0037500:CDS | 35.0% | |
| TCAATGTAGTTGGAACAAGA+AGG | + | chr1_1:66512282-66512301 | None:intergenic | 35.0% | |
| ATCTTTATGTTGCAGCCATT+TGG | - | chr1_1:66512315-66512334 | Msa0037500:CDS | 35.0% | |
| AAATCTCCATCTTCAAAAGC+TGG | + | chr1_1:66512348-66512367 | None:intergenic | 35.0% | |
| ! | GATGGAGATTTAAAGCTCTT+TGG | - | chr1_1:66512357-66512376 | Msa0037500:CDS | 35.0% |
| ATTTGATGTCTGACACGATT+AGG | - | chr1_1:66512435-66512454 | Msa0037500:CDS | 35.0% | |
| GGAGGAATGAAATAGATCTA+GGG | + | chr1_1:66512703-66512722 | None:intergenic | 35.0% | |
| TGGAGGAATGAAATAGATCT+AGG | + | chr1_1:66512704-66512723 | None:intergenic | 35.0% | |
| TGCAGAACAGAAAGCAATTT+CGG | + | chr1_1:66512736-66512755 | None:intergenic | 35.0% | |
| AGATTCCTTCTACAAACGTT+CGG | - | chr1_1:66512973-66512992 | Msa0037500:intron | 35.0% | |
| ATTAGGATTCAGTTTCCAGA+TGG | - | chr1_1:66513121-66513140 | Msa0037500:intron | 35.0% | |
| ! | TCTCTTCTTTTCCCCTTTAA+TGG | - | chr1_1:66513230-66513249 | Msa0037500:intron | 35.0% |
| ! | TTCTTTTCCCCTTTAATGGT+GGG | - | chr1_1:66513234-66513253 | Msa0037500:intron | 35.0% |
| TTCTACTGATGGTATTGCTT+TGG | - | chr1_1:66513387-66513406 | Msa0037500:intron | 35.0% | |
| TCTACTGATGGTATTGCTTT+GGG | - | chr1_1:66513388-66513407 | Msa0037500:intron | 35.0% | |
| AAATATTCACTATGGGTACG+GGG | - | chr1_1:66513462-66513481 | Msa0037500:intron | 35.0% | |
| ATTCAATTTCTCATTCCCGT+TGG | - | chr1_1:66513526-66513545 | Msa0037500:intron | 35.0% | |
| TTCAATTTCTCATTCCCGTT+GGG | - | chr1_1:66513527-66513546 | Msa0037500:intron | 35.0% | |
| !! | GTTTTTGAGAATAGGGTATG+GGG | - | chr1_1:66513571-66513590 | Msa0037500:intron | 35.0% |
| TGATCATGAGTATGCTGATA+AGG | - | chr1_1:66513783-66513802 | Msa0037500:intron | 35.0% | |
| GATCATGAGTATGCTGATAA+GGG | - | chr1_1:66513784-66513803 | Msa0037500:intron | 35.0% | |
| ATCATGAGTATGCTGATAAG+GGG | - | chr1_1:66513785-66513804 | Msa0037500:intron | 35.0% | |
| ACTCATTATTGCCATCTTCT+TGG | + | chr1_1:66513833-66513852 | None:intergenic | 35.0% | |
| !! | ATGCTACTTTATCGTAGTGT+AGG | + | chr1_1:66513876-66513895 | None:intergenic | 35.0% |
| ! | CAAAACTTGTTTGGGAATTG+GGG | - | chr1_1:66513896-66513915 | Msa0037500:intron | 35.0% |
| TTGGGGATCAAGACTTTATT+TGG | - | chr1_1:66513913-66513932 | Msa0037500:CDS | 35.0% | |
| TCCTTTGGATTCAAAAGTTG+TGG | - | chr1_1:66513939-66513958 | Msa0037500:intron | 35.0% | |
| ! | TCCACAACTTTTGAATCCAA+AGG | + | chr1_1:66513943-66513962 | None:intergenic | 35.0% |
| ATCAAGAATGCTATCCAACT+TGG | + | chr1_1:66513977-66513996 | None:intergenic | 35.0% | |
| TCTGAATCTAAATACATGGG+AGG | - | chr1_1:66514015-66514034 | Msa0037500:intron | 35.0% | |
| TAAATGATGCAAATCCACCA+AGG | + | chr1_1:66514052-66514071 | None:intergenic | 35.0% | |
| TTCATCAAGTAGTGAAGAGA+AGG | + | chr1_1:66514075-66514094 | None:intergenic | 35.0% | |
| CAAGACCTTATGTTAATGCT+TGG | - | chr1_1:66514121-66514140 | Msa0037500:CDS | 35.0% | |
| TCAACCCAAGCATTAACATA+AGG | + | chr1_1:66514129-66514148 | None:intergenic | 35.0% | |
| GAGGAATGGTGAACACAAAA+AGG | - | chr1_1:66512176-66512195 | Msa0037500:CDS | 40.0% | |
| AAAGCTGGAACTTGACCAAA+TGG | + | chr1_1:66512333-66512352 | None:intergenic | 40.0% | |
| !! | CAAGTTCCAGCTTTTGAAGA+TGG | - | chr1_1:66512339-66512358 | Msa0037500:CDS | 40.0% |
| ! | TTTTCCCCGATTCCAAAACA+CGG | - | chr1_1:66512554-66512573 | Msa0037500:intron | 40.0% |
| TATACATTCGGGTAGGGTAT+GGG | + | chr1_1:66512626-66512645 | None:intergenic | 40.0% | |
| TTATACATTCGGGTAGGGTA+TGG | + | chr1_1:66512627-66512646 | None:intergenic | 40.0% | |
| CCAATGAGTCATTGAGAGAA+TGG | + | chr1_1:66512797-66512816 | None:intergenic | 40.0% | |
| CCATTCTCTCAATGACTCAT+TGG | - | chr1_1:66512794-66512813 | Msa0037500:intron | 40.0% | |
| AGAAGACCTTTACCTGAAAG+AGG | + | chr1_1:66512913-66512932 | None:intergenic | 40.0% | |
| TGAGAAGAGAAGCTGAGTTA+AGG | - | chr1_1:66513005-66513024 | Msa0037500:intron | 40.0% | |
| TTCAAGGTGTATTTGCTCCA+TGG | - | chr1_1:66513152-66513171 | Msa0037500:intron | 40.0% | |
| TCAAGGTGTATTTGCTCCAT+GGG | - | chr1_1:66513153-66513172 | Msa0037500:intron | 40.0% | |
| AGTTTATACAGAGCCGTAGT+TGG | + | chr1_1:66513181-66513200 | None:intergenic | 40.0% | |
| ! | CTTCTTTTCCCCTTTAATGG+TGG | - | chr1_1:66513233-66513252 | Msa0037500:intron | 40.0% |
| ! | TCTTTTCCCCTTTAATGGTG+GGG | - | chr1_1:66513235-66513254 | Msa0037500:intron | 40.0% |
| TATATCCCCCACCATTAAAG+GGG | + | chr1_1:66513244-66513263 | None:intergenic | 40.0% | |
| CTATATCCCCCACCATTAAA+GGG | + | chr1_1:66513245-66513264 | None:intergenic | 40.0% | |
| TCTATATCCCCCACCATTAA+AGG | + | chr1_1:66513246-66513265 | None:intergenic | 40.0% | |
| CTACTGATGGTATTGCTTTG+GGG | - | chr1_1:66513389-66513408 | Msa0037500:intron | 40.0% | |
| TACTGATGGTATTGCTTTGG+GGG | - | chr1_1:66513390-66513409 | Msa0037500:intron | 40.0% | |
| TTTGATATCGTGTCTAGGCA+TGG | + | chr1_1:66513635-66513654 | None:intergenic | 40.0% | |
| GTGTGTTTGATATCGTGTCT+AGG | + | chr1_1:66513640-66513659 | None:intergenic | 40.0% | |
| AGATGGCAATAATGAGTGTG+TGG | - | chr1_1:66513836-66513855 | Msa0037500:intron | 40.0% | |
| GAGGAATGGTGAACACAAAA+AGG | - | chr1_1:66512176-66512195 | Msa0037500:CDS | 40.0% | |
| AAAGCTGGAACTTGACCAAA+TGG | + | chr1_1:66512333-66512352 | None:intergenic | 40.0% | |
| !! | CAAGTTCCAGCTTTTGAAGA+TGG | - | chr1_1:66512339-66512358 | Msa0037500:CDS | 40.0% |
| ! | TTTTCCCCGATTCCAAAACA+CGG | - | chr1_1:66512554-66512573 | Msa0037500:intron | 40.0% |
| TATACATTCGGGTAGGGTAT+GGG | + | chr1_1:66512626-66512645 | None:intergenic | 40.0% | |
| TTATACATTCGGGTAGGGTA+TGG | + | chr1_1:66512627-66512646 | None:intergenic | 40.0% | |
| CCAATGAGTCATTGAGAGAA+TGG | + | chr1_1:66512797-66512816 | None:intergenic | 40.0% | |
| CCATTCTCTCAATGACTCAT+TGG | - | chr1_1:66512794-66512813 | Msa0037500:intron | 40.0% | |
| AGAAGACCTTTACCTGAAAG+AGG | + | chr1_1:66512913-66512932 | None:intergenic | 40.0% | |
| TGAGAAGAGAAGCTGAGTTA+AGG | - | chr1_1:66513005-66513024 | Msa0037500:intron | 40.0% | |
| TTCAAGGTGTATTTGCTCCA+TGG | - | chr1_1:66513152-66513171 | Msa0037500:intron | 40.0% | |
| TCAAGGTGTATTTGCTCCAT+GGG | - | chr1_1:66513153-66513172 | Msa0037500:intron | 40.0% | |
| AGTTTATACAGAGCCGTAGT+TGG | + | chr1_1:66513181-66513200 | None:intergenic | 40.0% | |
| ! | CTTCTTTTCCCCTTTAATGG+TGG | - | chr1_1:66513233-66513252 | Msa0037500:intron | 40.0% |
| ! | TCTTTTCCCCTTTAATGGTG+GGG | - | chr1_1:66513235-66513254 | Msa0037500:intron | 40.0% |
| TATATCCCCCACCATTAAAG+GGG | + | chr1_1:66513244-66513263 | None:intergenic | 40.0% | |
| CTATATCCCCCACCATTAAA+GGG | + | chr1_1:66513245-66513264 | None:intergenic | 40.0% | |
| TCTATATCCCCCACCATTAA+AGG | + | chr1_1:66513246-66513265 | None:intergenic | 40.0% | |
| CTACTGATGGTATTGCTTTG+GGG | - | chr1_1:66513389-66513408 | Msa0037500:intron | 40.0% | |
| TACTGATGGTATTGCTTTGG+GGG | - | chr1_1:66513390-66513409 | Msa0037500:intron | 40.0% | |
| TTTGATATCGTGTCTAGGCA+TGG | + | chr1_1:66513635-66513654 | None:intergenic | 40.0% | |
| GTGTGTTTGATATCGTGTCT+AGG | + | chr1_1:66513640-66513659 | None:intergenic | 40.0% | |
| AGATGGCAATAATGAGTGTG+TGG | - | chr1_1:66513836-66513855 | Msa0037500:intron | 40.0% | |
| ATGTCTGACACGATTAGGCA+TGG | - | chr1_1:66512440-66512459 | Msa0037500:CDS | 45.0% | |
| AAAACCCGTCAACTTTGGGT+GGG | + | chr1_1:66512500-66512519 | None:intergenic | 45.0% | |
| ATACCCAAACCCAGTCAAAG+CGG | + | chr1_1:66512525-66512544 | None:intergenic | 45.0% | |
| CTTTGACTGGGTTTGGGTAT+GGG | - | chr1_1:66512525-66512544 | Msa0037500:intron | 45.0% | |
| TTTCCCCGATTCCAAAACAC+GGG | - | chr1_1:66512555-66512574 | Msa0037500:intron | 45.0% | |
| !!! | ATACCCGTGTTTTGGAATCG+GGG | + | chr1_1:66512561-66512580 | None:intergenic | 45.0% |
| !!! | CATACCCGTGTTTTGGAATC+GGG | + | chr1_1:66512562-66512581 | None:intergenic | 45.0% |
| !!! | CCATACCCGTGTTTTGGAAT+CGG | + | chr1_1:66512563-66512582 | None:intergenic | 45.0% |
| CGATTCCAAAACACGGGTAT+GGG | - | chr1_1:66512561-66512580 | Msa0037500:intron | 45.0% | |
| ATTTCATTCCTCCAGTCCAG+CGG | - | chr1_1:66512710-66512729 | Msa0037500:intron | 45.0% | |
| TTCAGCCGAACGTTTGTAGA+AGG | + | chr1_1:66512981-66513000 | None:intergenic | 45.0% | |
| CCTTGAAGTACAACTCCATC+TGG | + | chr1_1:66513139-66513158 | None:intergenic | 45.0% | |
| CCAGATGGAGTTGTACTTCA+AGG | - | chr1_1:66513136-66513155 | Msa0037500:intron | 45.0% | |
| ! | CTTTTCCCCTTTAATGGTGG+GGG | - | chr1_1:66513236-66513255 | Msa0037500:intron | 45.0% |
| GCTGTTGAGCATTCTACTGA+TGG | - | chr1_1:66513376-66513395 | Msa0037500:intron | 45.0% | |
| TTTCTCATTCCCGTTGGGTA+TGG | - | chr1_1:66513532-66513551 | Msa0037500:intron | 45.0% | |
| TTCTCATTCCCGTTGGGTAT+GGG | - | chr1_1:66513533-66513552 | Msa0037500:intron | 45.0% | |
| ATTACCCTACCCATACCCAA+CGG | + | chr1_1:66513545-66513564 | None:intergenic | 45.0% | |
| TTGGGTATGGGTAGGGTAAT+GGG | - | chr1_1:66513545-66513564 | Msa0037500:intron | 45.0% | |
| TTGAGAATAGGGTATGGGGA+TGG | - | chr1_1:66513575-66513594 | Msa0037500:intron | 45.0% | |
| TGAGAATAGGGTATGGGGAT+GGG | - | chr1_1:66513576-66513595 | Msa0037500:intron | 45.0% | |
| GACACGATATCAAACACACG+TGG | - | chr1_1:66513641-66513660 | Msa0037500:intron | 45.0% | |
| AAGCAGTGACTCCAAGAAGA+TGG | - | chr1_1:66513819-66513838 | Msa0037500:intron | 45.0% | |
| GGCAATAATGAGTGTGTGGT+CGG | - | chr1_1:66513840-66513859 | Msa0037500:intron | 45.0% | |
| GGAAGAGAATGAAGCCAAGT+TGG | - | chr1_1:66513960-66513979 | Msa0037500:intron | 45.0% | |
| ATATCACTGCAAGACCAGCT+TGG | - | chr1_1:66514151-66514170 | Msa0037500:CDS | 45.0% | |
| GCAAGTACTTTAGACCAAGC+TGG | + | chr1_1:66514168-66514187 | None:intergenic | 45.0% | |
| ATGTCTGACACGATTAGGCA+TGG | - | chr1_1:66512440-66512459 | Msa0037500:CDS | 45.0% | |
| AAAACCCGTCAACTTTGGGT+GGG | + | chr1_1:66512500-66512519 | None:intergenic | 45.0% | |
| ATACCCAAACCCAGTCAAAG+CGG | + | chr1_1:66512525-66512544 | None:intergenic | 45.0% | |
| CTTTGACTGGGTTTGGGTAT+GGG | - | chr1_1:66512525-66512544 | Msa0037500:intron | 45.0% | |
| TTTCCCCGATTCCAAAACAC+GGG | - | chr1_1:66512555-66512574 | Msa0037500:intron | 45.0% | |
| !!! | ATACCCGTGTTTTGGAATCG+GGG | + | chr1_1:66512561-66512580 | None:intergenic | 45.0% |
| !!! | CATACCCGTGTTTTGGAATC+GGG | + | chr1_1:66512562-66512581 | None:intergenic | 45.0% |
| !!! | CCATACCCGTGTTTTGGAAT+CGG | + | chr1_1:66512563-66512582 | None:intergenic | 45.0% |
| CGATTCCAAAACACGGGTAT+GGG | - | chr1_1:66512561-66512580 | Msa0037500:intron | 45.0% | |
| ATTTCATTCCTCCAGTCCAG+CGG | - | chr1_1:66512710-66512729 | Msa0037500:intron | 45.0% | |
| TTCAGCCGAACGTTTGTAGA+AGG | + | chr1_1:66512981-66513000 | None:intergenic | 45.0% | |
| CCTTGAAGTACAACTCCATC+TGG | + | chr1_1:66513139-66513158 | None:intergenic | 45.0% | |
| CCAGATGGAGTTGTACTTCA+AGG | - | chr1_1:66513136-66513155 | Msa0037500:intron | 45.0% | |
| ! | CTTTTCCCCTTTAATGGTGG+GGG | - | chr1_1:66513236-66513255 | Msa0037500:intron | 45.0% |
| GCTGTTGAGCATTCTACTGA+TGG | - | chr1_1:66513376-66513395 | Msa0037500:intron | 45.0% | |
| TTTCTCATTCCCGTTGGGTA+TGG | - | chr1_1:66513532-66513551 | Msa0037500:intron | 45.0% | |
| TTCTCATTCCCGTTGGGTAT+GGG | - | chr1_1:66513533-66513552 | Msa0037500:intron | 45.0% | |
| ATTACCCTACCCATACCCAA+CGG | + | chr1_1:66513545-66513564 | None:intergenic | 45.0% | |
| TTGGGTATGGGTAGGGTAAT+GGG | - | chr1_1:66513545-66513564 | Msa0037500:intron | 45.0% | |
| TTGAGAATAGGGTATGGGGA+TGG | - | chr1_1:66513575-66513594 | Msa0037500:intron | 45.0% | |
| TGAGAATAGGGTATGGGGAT+GGG | - | chr1_1:66513576-66513595 | Msa0037500:intron | 45.0% | |
| GACACGATATCAAACACACG+TGG | - | chr1_1:66513641-66513660 | Msa0037500:intron | 45.0% | |
| AAGCAGTGACTCCAAGAAGA+TGG | - | chr1_1:66513819-66513838 | Msa0037500:intron | 45.0% | |
| GGCAATAATGAGTGTGTGGT+CGG | - | chr1_1:66513840-66513859 | Msa0037500:intron | 45.0% | |
| GGAAGAGAATGAAGCCAAGT+TGG | - | chr1_1:66513960-66513979 | Msa0037500:intron | 45.0% | |
| ATATCACTGCAAGACCAGCT+TGG | - | chr1_1:66514151-66514170 | Msa0037500:CDS | 45.0% | |
| GCAAGTACTTTAGACCAAGC+TGG | + | chr1_1:66514168-66514187 | None:intergenic | 45.0% | |
| !! | TATTTATATAAAAAAAAAAG+GGG | + | chr1_1:66512663-66512682 | None:intergenic | 5.0% |
| !! | CTATTTATATAAAAAAAAAA+GGG | + | chr1_1:66512664-66512683 | None:intergenic | 5.0% |
| !! | TCTATTTATATAAAAAAAAA+AGG | + | chr1_1:66512665-66512684 | None:intergenic | 5.0% |
| !! | TATTTATATAAAAAAAAAAG+GGG | + | chr1_1:66512663-66512682 | None:intergenic | 5.0% |
| !! | CTATTTATATAAAAAAAAAA+GGG | + | chr1_1:66512664-66512683 | None:intergenic | 5.0% |
| !! | TCTATTTATATAAAAAAAAA+AGG | + | chr1_1:66512665-66512684 | None:intergenic | 5.0% |
| CGTCAACTTTGGGTGGGTAT+GGG | + | chr1_1:66512494-66512513 | None:intergenic | 50.0% | |
| CCATACCCACCCAAAGTTGA+CGG | - | chr1_1:66512492-66512511 | Msa0037500:CDS | 50.0% | |
| CATACCCACCCAAAGTTGAC+GGG | - | chr1_1:66512493-66512512 | Msa0037500:CDS | 50.0% | |
| GAAAACCCGTCAACTTTGGG+TGG | + | chr1_1:66512501-66512520 | None:intergenic | 50.0% | |
| GGGGAAAACCCGTCAACTTT+GGG | + | chr1_1:66512504-66512523 | None:intergenic | 50.0% | |
| TACCCAAACCCAGTCAAAGC+GGG | + | chr1_1:66512524-66512543 | None:intergenic | 50.0% | |
| GCTTTGACTGGGTTTGGGTA+TGG | - | chr1_1:66512524-66512543 | Msa0037500:intron | 50.0% | |
| ACTGGGTTTGGGTATGGGTA+TGG | - | chr1_1:66512530-66512549 | Msa0037500:intron | 50.0% | |
| CTGGGTTTGGGTATGGGTAT+GGG | - | chr1_1:66512531-66512550 | Msa0037500:intron | 50.0% | |
| CCGATTCCAAAACACGGGTA+TGG | - | chr1_1:66512560-66512579 | Msa0037500:intron | 50.0% | |
| TCCAAAACACGGGTATGGGA+CGG | - | chr1_1:66512565-66512584 | Msa0037500:intron | 50.0% | |
| TAGGGTATGGGTATGGGTTC+GGG | + | chr1_1:66512614-66512633 | None:intergenic | 50.0% | |
| GTAGGGTATGGGTATGGGTT+CGG | + | chr1_1:66512615-66512634 | None:intergenic | 50.0% | |
| TTCGGGTAGGGTATGGGTAT+GGG | + | chr1_1:66512620-66512639 | None:intergenic | 50.0% | |
| ATTCGGGTAGGGTATGGGTA+TGG | + | chr1_1:66512621-66512640 | None:intergenic | 50.0% | |
| CTACAAACGTTCGGCTGAAG+AGG | - | chr1_1:66512982-66513001 | Msa0037500:intron | 50.0% | |
| AGCAAGCTAAAGCTGCGAAG+AGG | - | chr1_1:66513080-66513099 | Msa0037500:intron | 50.0% | |
| TGCTCCATGGGAACCAACTA+CGG | - | chr1_1:66513165-66513184 | Msa0037500:intron | 50.0% | |
| ATTCACTATGGGTACGGGGA+TGG | - | chr1_1:66513466-66513485 | Msa0037500:intron | 50.0% | |
| TTCACTATGGGTACGGGGAT+GGG | - | chr1_1:66513467-66513486 | Msa0037500:intron | 50.0% | |
| ATTCCCGTTGGGTATGGGTA+GGG | - | chr1_1:66513538-66513557 | Msa0037500:intron | 50.0% | |
| TTACCCTACCCATACCCAAC+GGG | + | chr1_1:66513544-66513563 | None:intergenic | 50.0% | |
| GTTGGGTATGGGTAGGGTAA+TGG | - | chr1_1:66513544-66513563 | Msa0037500:intron | 50.0% | |
| GAGAATAGGGTATGGGGATG+GGG | - | chr1_1:66513577-66513596 | Msa0037500:intron | 50.0% | |
| TCTAGGCATGGCAATGGGTA+CGG | + | chr1_1:66513623-66513642 | None:intergenic | 50.0% | |
| TCGTGTCTAGGCATGGCAAT+GGG | + | chr1_1:66513628-66513647 | None:intergenic | 50.0% | |
| ATCGTGTCTAGGCATGGCAA+TGG | + | chr1_1:66513629-66513648 | None:intergenic | 50.0% | |
| AATGAGTGTGTGGTCGGAAG+TGG | - | chr1_1:66513846-66513865 | Msa0037500:intron | 50.0% | |
| AGGTGAGTGTTTCACCTTGG+TGG | - | chr1_1:66514035-66514054 | Msa0037500:intron | 50.0% | |
| CGTCAACTTTGGGTGGGTAT+GGG | + | chr1_1:66512494-66512513 | None:intergenic | 50.0% | |
| CCATACCCACCCAAAGTTGA+CGG | - | chr1_1:66512492-66512511 | Msa0037500:CDS | 50.0% | |
| CATACCCACCCAAAGTTGAC+GGG | - | chr1_1:66512493-66512512 | Msa0037500:CDS | 50.0% | |
| GAAAACCCGTCAACTTTGGG+TGG | + | chr1_1:66512501-66512520 | None:intergenic | 50.0% | |
| GGGGAAAACCCGTCAACTTT+GGG | + | chr1_1:66512504-66512523 | None:intergenic | 50.0% | |
| TACCCAAACCCAGTCAAAGC+GGG | + | chr1_1:66512524-66512543 | None:intergenic | 50.0% | |
| GCTTTGACTGGGTTTGGGTA+TGG | - | chr1_1:66512524-66512543 | Msa0037500:intron | 50.0% | |
| ACTGGGTTTGGGTATGGGTA+TGG | - | chr1_1:66512530-66512549 | Msa0037500:intron | 50.0% | |
| CTGGGTTTGGGTATGGGTAT+GGG | - | chr1_1:66512531-66512550 | Msa0037500:intron | 50.0% | |
| CCGATTCCAAAACACGGGTA+TGG | - | chr1_1:66512560-66512579 | Msa0037500:intron | 50.0% | |
| TCCAAAACACGGGTATGGGA+CGG | - | chr1_1:66512565-66512584 | Msa0037500:intron | 50.0% | |
| TAGGGTATGGGTATGGGTTC+GGG | + | chr1_1:66512614-66512633 | None:intergenic | 50.0% | |
| GTAGGGTATGGGTATGGGTT+CGG | + | chr1_1:66512615-66512634 | None:intergenic | 50.0% | |
| TTCGGGTAGGGTATGGGTAT+GGG | + | chr1_1:66512620-66512639 | None:intergenic | 50.0% | |
| ATTCGGGTAGGGTATGGGTA+TGG | + | chr1_1:66512621-66512640 | None:intergenic | 50.0% | |
| CTACAAACGTTCGGCTGAAG+AGG | - | chr1_1:66512982-66513001 | Msa0037500:intron | 50.0% | |
| AGCAAGCTAAAGCTGCGAAG+AGG | - | chr1_1:66513080-66513099 | Msa0037500:intron | 50.0% | |
| TGCTCCATGGGAACCAACTA+CGG | - | chr1_1:66513165-66513184 | Msa0037500:intron | 50.0% | |
| ATTCACTATGGGTACGGGGA+TGG | - | chr1_1:66513466-66513485 | Msa0037500:intron | 50.0% | |
| TTCACTATGGGTACGGGGAT+GGG | - | chr1_1:66513467-66513486 | Msa0037500:intron | 50.0% | |
| ATTCCCGTTGGGTATGGGTA+GGG | - | chr1_1:66513538-66513557 | Msa0037500:intron | 50.0% | |
| TTACCCTACCCATACCCAAC+GGG | + | chr1_1:66513544-66513563 | None:intergenic | 50.0% | |
| GTTGGGTATGGGTAGGGTAA+TGG | - | chr1_1:66513544-66513563 | Msa0037500:intron | 50.0% | |
| GAGAATAGGGTATGGGGATG+GGG | - | chr1_1:66513577-66513596 | Msa0037500:intron | 50.0% | |
| TCTAGGCATGGCAATGGGTA+CGG | + | chr1_1:66513623-66513642 | None:intergenic | 50.0% | |
| TCGTGTCTAGGCATGGCAAT+GGG | + | chr1_1:66513628-66513647 | None:intergenic | 50.0% | |
| ATCGTGTCTAGGCATGGCAA+TGG | + | chr1_1:66513629-66513648 | None:intergenic | 50.0% | |
| AATGAGTGTGTGGTCGGAAG+TGG | - | chr1_1:66513846-66513865 | Msa0037500:intron | 50.0% | |
| AGGTGAGTGTTTCACCTTGG+TGG | - | chr1_1:66514035-66514054 | Msa0037500:intron | 50.0% | |
| GCACGGAAGCCCTATCTCAA+CGG | - | chr1_1:66512086-66512105 | Msa0037500:CDS | 55.0% | |
| GCATGGTGGCCGTTGAGATA+GGG | + | chr1_1:66512098-66512117 | None:intergenic | 55.0% | |
| CTATCTCAACGGCCACCATG+CGG | - | chr1_1:66512097-66512116 | Msa0037500:CDS | 55.0% | |
| TATCTCAACGGCCACCATGC+GGG | - | chr1_1:66512098-66512117 | Msa0037500:CDS | 55.0% | |
| AGTTGCAGTAACCCGCATGG+TGG | + | chr1_1:66512112-66512131 | None:intergenic | 55.0% | |
| CAGAGTTGCAGTAACCCGCA+TGG | + | chr1_1:66512115-66512134 | None:intergenic | 55.0% | |
| AACTTTGGGTGGGTATGGGC+GGG | + | chr1_1:66512490-66512509 | None:intergenic | 55.0% | |
| CAACTTTGGGTGGGTATGGG+CGG | + | chr1_1:66512491-66512510 | None:intergenic | 55.0% | |
| CCGTCAACTTTGGGTGGGTA+TGG | + | chr1_1:66512495-66512514 | None:intergenic | 55.0% | |
| CGGGGAAAACCCGTCAACTT+TGG | + | chr1_1:66512505-66512524 | None:intergenic | 55.0% | |
| ! | GGGTTTTCCCCGCTTTGACT+GGG | - | chr1_1:66512513-66512532 | Msa0037500:intron | 55.0% |
| TTCCCCGCTTTGACTGGGTT+TGG | - | chr1_1:66512518-66512537 | Msa0037500:intron | 55.0% | |
| TCCCCGCTTTGACTGGGTTT+GGG | - | chr1_1:66512519-66512538 | Msa0037500:intron | 55.0% | |
| ACCCAAACCCAGTCAAAGCG+GGG | + | chr1_1:66512523-66512542 | None:intergenic | 55.0% | |
| CCAAAACACGGGTATGGGAC+GGG | - | chr1_1:66512566-66512585 | Msa0037500:intron | 55.0% | |
| !! | GGGACGGGTAACGGGTATAT+AGG | - | chr1_1:66512581-66512600 | Msa0037500:intron | 55.0% |
| TATGGGTATGGGTTCGGGGT+GGG | + | chr1_1:66512609-66512628 | None:intergenic | 55.0% | |
| AGGGTATGGGTATGGGTTCG+GGG | + | chr1_1:66512613-66512632 | None:intergenic | 55.0% | |
| CAGAAAGCAATTTCGGCCGC+TGG | + | chr1_1:66512729-66512748 | None:intergenic | 55.0% | |
| ! | AGAGCCGTAGTTGGTTCCCA+TGG | + | chr1_1:66513172-66513191 | None:intergenic | 55.0% |
| TCACTATGGGTACGGGGATG+GGG | - | chr1_1:66513468-66513487 | Msa0037500:intron | 55.0% | |
| CATTCCCGTTGGGTATGGGT+AGG | - | chr1_1:66513537-66513556 | Msa0037500:intron | 55.0% | |
| ATAGGGTATGGGGATGGGGA+AGG | - | chr1_1:66513581-66513600 | Msa0037500:intron | 55.0% | |
| CTAGGCATGGCAATGGGTAC+GGG | + | chr1_1:66513622-66513641 | None:intergenic | 55.0% | |
| GGGAGGTGAGTGTTTCACCT+TGG | - | chr1_1:66514032-66514051 | Msa0037500:intron | 55.0% | |
| GCACGGAAGCCCTATCTCAA+CGG | - | chr1_1:66512086-66512105 | Msa0037500:CDS | 55.0% | |
| GCATGGTGGCCGTTGAGATA+GGG | + | chr1_1:66512098-66512117 | None:intergenic | 55.0% | |
| CTATCTCAACGGCCACCATG+CGG | - | chr1_1:66512097-66512116 | Msa0037500:CDS | 55.0% | |
| TATCTCAACGGCCACCATGC+GGG | - | chr1_1:66512098-66512117 | Msa0037500:CDS | 55.0% | |
| AGTTGCAGTAACCCGCATGG+TGG | + | chr1_1:66512112-66512131 | None:intergenic | 55.0% | |
| CAGAGTTGCAGTAACCCGCA+TGG | + | chr1_1:66512115-66512134 | None:intergenic | 55.0% | |
| AACTTTGGGTGGGTATGGGC+GGG | + | chr1_1:66512490-66512509 | None:intergenic | 55.0% | |
| CAACTTTGGGTGGGTATGGG+CGG | + | chr1_1:66512491-66512510 | None:intergenic | 55.0% | |
| CCGTCAACTTTGGGTGGGTA+TGG | + | chr1_1:66512495-66512514 | None:intergenic | 55.0% | |
| CGGGGAAAACCCGTCAACTT+TGG | + | chr1_1:66512505-66512524 | None:intergenic | 55.0% | |
| ! | GGGTTTTCCCCGCTTTGACT+GGG | - | chr1_1:66512513-66512532 | Msa0037500:intron | 55.0% |
| TTCCCCGCTTTGACTGGGTT+TGG | - | chr1_1:66512518-66512537 | Msa0037500:intron | 55.0% | |
| TCCCCGCTTTGACTGGGTTT+GGG | - | chr1_1:66512519-66512538 | Msa0037500:intron | 55.0% | |
| ACCCAAACCCAGTCAAAGCG+GGG | + | chr1_1:66512523-66512542 | None:intergenic | 55.0% | |
| CCAAAACACGGGTATGGGAC+GGG | - | chr1_1:66512566-66512585 | Msa0037500:intron | 55.0% | |
| !! | GGGACGGGTAACGGGTATAT+AGG | - | chr1_1:66512581-66512600 | Msa0037500:intron | 55.0% |
| TATGGGTATGGGTTCGGGGT+GGG | + | chr1_1:66512609-66512628 | None:intergenic | 55.0% | |
| AGGGTATGGGTATGGGTTCG+GGG | + | chr1_1:66512613-66512632 | None:intergenic | 55.0% | |
| CAGAAAGCAATTTCGGCCGC+TGG | + | chr1_1:66512729-66512748 | None:intergenic | 55.0% | |
| ! | AGAGCCGTAGTTGGTTCCCA+TGG | + | chr1_1:66513172-66513191 | None:intergenic | 55.0% |
| TCACTATGGGTACGGGGATG+GGG | - | chr1_1:66513468-66513487 | Msa0037500:intron | 55.0% | |
| CATTCCCGTTGGGTATGGGT+AGG | - | chr1_1:66513537-66513556 | Msa0037500:intron | 55.0% | |
| ATAGGGTATGGGGATGGGGA+AGG | - | chr1_1:66513581-66513600 | Msa0037500:intron | 55.0% | |
| CTAGGCATGGCAATGGGTAC+GGG | + | chr1_1:66513622-66513641 | None:intergenic | 55.0% | |
| GGGAGGTGAGTGTTTCACCT+TGG | - | chr1_1:66514032-66514051 | Msa0037500:intron | 55.0% | |
| CGCATGGTGGCCGTTGAGAT+AGG | + | chr1_1:66512099-66512118 | None:intergenic | 60.0% | |
| GCAACAATACCCGTCCCCGT+GGG | - | chr1_1:66512462-66512481 | Msa0037500:CDS | 60.0% | |
| ! | CGGGTTTTCCCCGCTTTGAC+TGG | - | chr1_1:66512512-66512531 | Msa0037500:intron | 60.0% |
| ! | CCCGTCCCATACCCGTGTTT+TGG | + | chr1_1:66512569-66512588 | None:intergenic | 60.0% |
| CACGGGTATGGGACGGGTAA+CGG | - | chr1_1:66512572-66512591 | Msa0037500:intron | 60.0% | |
| ACGGGTATGGGACGGGTAAC+GGG | - | chr1_1:66512573-66512592 | Msa0037500:intron | 60.0% | |
| GTATGGGTATGGGTTCGGGG+TGG | + | chr1_1:66512610-66512629 | None:intergenic | 60.0% | |
| ! | AATTTCGGCCGCTGGACTGG+AGG | + | chr1_1:66512721-66512740 | None:intergenic | 60.0% |
| AGCAATTTCGGCCGCTGGAC+TGG | + | chr1_1:66512724-66512743 | None:intergenic | 60.0% | |
| TATGGGTACGGGGATGGGGA+TGG | - | chr1_1:66513472-66513491 | Msa0037500:intron | 60.0% | |
| ATGGGTACGGGGATGGGGAT+GGG | - | chr1_1:66513473-66513492 | Msa0037500:intron | 60.0% | |
| CATGGCAATGGGTACGGGTG+GGG | + | chr1_1:66513617-66513636 | None:intergenic | 60.0% | |
| GCATGGCAATGGGTACGGGT+GGG | + | chr1_1:66513618-66513637 | None:intergenic | 60.0% | |
| CGCATGGTGGCCGTTGAGAT+AGG | + | chr1_1:66512099-66512118 | None:intergenic | 60.0% | |
| GCAACAATACCCGTCCCCGT+GGG | - | chr1_1:66512462-66512481 | Msa0037500:CDS | 60.0% | |
| ! | CGGGTTTTCCCCGCTTTGAC+TGG | - | chr1_1:66512512-66512531 | Msa0037500:intron | 60.0% |
| ! | CCCGTCCCATACCCGTGTTT+TGG | + | chr1_1:66512569-66512588 | None:intergenic | 60.0% |
| CACGGGTATGGGACGGGTAA+CGG | - | chr1_1:66512572-66512591 | Msa0037500:intron | 60.0% | |
| ACGGGTATGGGACGGGTAAC+GGG | - | chr1_1:66512573-66512592 | Msa0037500:intron | 60.0% | |
| GTATGGGTATGGGTTCGGGG+TGG | + | chr1_1:66512610-66512629 | None:intergenic | 60.0% | |
| ! | AATTTCGGCCGCTGGACTGG+AGG | + | chr1_1:66512721-66512740 | None:intergenic | 60.0% |
| AGCAATTTCGGCCGCTGGAC+TGG | + | chr1_1:66512724-66512743 | None:intergenic | 60.0% | |
| TATGGGTACGGGGATGGGGA+TGG | - | chr1_1:66513472-66513491 | Msa0037500:intron | 60.0% | |
| ATGGGTACGGGGATGGGGAT+GGG | - | chr1_1:66513473-66513492 | Msa0037500:intron | 60.0% | |
| CATGGCAATGGGTACGGGTG+GGG | + | chr1_1:66513617-66513636 | None:intergenic | 60.0% | |
| GCATGGCAATGGGTACGGGT+GGG | + | chr1_1:66513618-66513637 | None:intergenic | 60.0% | |
| GGCAACAATACCCGTCCCCG+TGG | - | chr1_1:66512461-66512480 | Msa0037500:CDS | 65.0% | |
| TGGGTATGGGCGGGTACCCA+CGG | + | chr1_1:66512481-66512500 | None:intergenic | 65.0% | |
| GATGGGATCCCCGAACCCGT+CGG | - | chr1_1:66513490-66513509 | Msa0037500:intron | 65.0% | |
| ATGGGATCCCCGAACCCGTC+GGG | - | chr1_1:66513491-66513510 | Msa0037500:intron | 65.0% | |
| AATCCCATCCCCGTCCCCGA+CGG | + | chr1_1:66513509-66513528 | None:intergenic | 65.0% | |
| CAATGGGTACGGGTGGGGAC+GGG | + | chr1_1:66513612-66513631 | None:intergenic | 65.0% | |
| GCAATGGGTACGGGTGGGGA+CGG | + | chr1_1:66513613-66513632 | None:intergenic | 65.0% | |
| GGCATGGCAATGGGTACGGG+TGG | + | chr1_1:66513619-66513638 | None:intergenic | 65.0% | |
| GGCAACAATACCCGTCCCCG+TGG | - | chr1_1:66512461-66512480 | Msa0037500:CDS | 65.0% | |
| TGGGTATGGGCGGGTACCCA+CGG | + | chr1_1:66512481-66512500 | None:intergenic | 65.0% | |
| GATGGGATCCCCGAACCCGT+CGG | - | chr1_1:66513490-66513509 | Msa0037500:intron | 65.0% | |
| ATGGGATCCCCGAACCCGTC+GGG | - | chr1_1:66513491-66513510 | Msa0037500:intron | 65.0% | |
| AATCCCATCCCCGTCCCCGA+CGG | + | chr1_1:66513509-66513528 | None:intergenic | 65.0% | |
| CAATGGGTACGGGTGGGGAC+GGG | + | chr1_1:66513612-66513631 | None:intergenic | 65.0% | |
| GCAATGGGTACGGGTGGGGA+CGG | + | chr1_1:66513613-66513632 | None:intergenic | 65.0% | |
| GGCATGGCAATGGGTACGGG+TGG | + | chr1_1:66513619-66513638 | None:intergenic | 65.0% | |
| GGTATGGGCGGGTACCCACG+GGG | + | chr1_1:66512479-66512498 | None:intergenic | 70.0% | |
| GGGTATGGGCGGGTACCCAC+GGG | + | chr1_1:66512480-66512499 | None:intergenic | 70.0% | |
| TGGGATCCCCGAACCCGTCG+GGG | - | chr1_1:66513492-66513511 | Msa0037500:intron | 70.0% | |
| ATCCCCGAACCCGTCGGGGA+CGG | - | chr1_1:66513496-66513515 | Msa0037500:intron | 70.0% | |
| ! | ATCCCCGTCCCCGACGGGTT+CGG | + | chr1_1:66513503-66513522 | None:intergenic | 70.0% |
| AACCCGTCGGGGACGGGGAT+GGG | - | chr1_1:66513503-66513522 | Msa0037500:intron | 70.0% | |
| ATCCCATCCCCGTCCCCGAC+GGG | + | chr1_1:66513508-66513527 | None:intergenic | 70.0% | |
| GGTATGGGCGGGTACCCACG+GGG | + | chr1_1:66512479-66512498 | None:intergenic | 70.0% | |
| GGGTATGGGCGGGTACCCAC+GGG | + | chr1_1:66512480-66512499 | None:intergenic | 70.0% | |
| TGGGATCCCCGAACCCGTCG+GGG | - | chr1_1:66513492-66513511 | Msa0037500:intron | 70.0% | |
| ATCCCCGAACCCGTCGGGGA+CGG | - | chr1_1:66513496-66513515 | Msa0037500:intron | 70.0% | |
| ! | ATCCCCGTCCCCGACGGGTT+CGG | + | chr1_1:66513503-66513522 | None:intergenic | 70.0% |
| AACCCGTCGGGGACGGGGAT+GGG | - | chr1_1:66513503-66513522 | Msa0037500:intron | 70.0% | |
| ATCCCATCCCCGTCCCCGAC+GGG | + | chr1_1:66513508-66513527 | None:intergenic | 70.0% | |
| TGGGCGGGTACCCACGGGGA+CGG | + | chr1_1:66512475-66512494 | None:intergenic | 75.0% | |
| TCCCCGAACCCGTCGGGGAC+GGG | - | chr1_1:66513497-66513516 | Msa0037500:intron | 75.0% | |
| ! | TCCCCGTCCCCGACGGGTTC+GGG | + | chr1_1:66513502-66513521 | None:intergenic | 75.0% |
| GAACCCGTCGGGGACGGGGA+TGG | - | chr1_1:66513502-66513521 | Msa0037500:intron | 75.0% | |
| TGGGCGGGTACCCACGGGGA+CGG | + | chr1_1:66512475-66512494 | None:intergenic | 75.0% | |
| TCCCCGAACCCGTCGGGGAC+GGG | - | chr1_1:66513497-66513516 | Msa0037500:intron | 75.0% | |
| ! | TCCCCGTCCCCGACGGGTTC+GGG | + | chr1_1:66513502-66513521 | None:intergenic | 75.0% |
| GAACCCGTCGGGGACGGGGA+TGG | - | chr1_1:66513502-66513521 | Msa0037500:intron | 75.0% | |
| ! | GGGCGGGTACCCACGGGGAC+GGG | + | chr1_1:66512474-66512493 | None:intergenic | 80.0% |
| !! | CCCCGTCCCCGACGGGTTCG+GGG | + | chr1_1:66513501-66513520 | None:intergenic | 80.0% |
| ! | CCCCGAACCCGTCGGGGACG+GGG | - | chr1_1:66513498-66513517 | Msa0037500:intron | 80.0% |
| ! | GGGCGGGTACCCACGGGGAC+GGG | + | chr1_1:66512474-66512493 | None:intergenic | 80.0% |
| !! | CCCCGTCCCCGACGGGTTCG+GGG | + | chr1_1:66513501-66513520 | None:intergenic | 80.0% |
| ! | CCCCGAACCCGTCGGGGACG+GGG | - | chr1_1:66513498-66513517 | Msa0037500:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 66512025 | 66514255 | 66512025 | ID=Msa0037500;Name=Msa0037500 |
| chr1_1 | mRNA | 66512025 | 66514255 | 66512025 | ID=Msa0037500-mRNA-1;Parent=Msa0037500;Name=Msa0037500-mRNA-1;_AED=0.31;_eAED=0.31;_QI=44|1|1|1|0.5|1|3|52|214 |
| chr1_1 | exon | 66512025 | 66512522 | 66512025 | ID=Msa0037500-mRNA-1:exon:21539;Parent=Msa0037500-mRNA-1 |
| chr1_1 | exon | 66513902 | 66513950 | 66513902 | ID=Msa0037500-mRNA-1:exon:21538;Parent=Msa0037500-mRNA-1 |
| chr1_1 | exon | 66514062 | 66514255 | 66514062 | ID=Msa0037500-mRNA-1:exon:21537;Parent=Msa0037500-mRNA-1 |
| chr1_1 | five_prime_UTR | 66514212 | 66514255 | 66514212 | ID=Msa0037500-mRNA-1:five_prime_utr;Parent=Msa0037500-mRNA-1 |
| chr1_1 | CDS | 66514062 | 66514211 | 66514062 | ID=Msa0037500-mRNA-1:cds;Parent=Msa0037500-mRNA-1 |
| chr1_1 | CDS | 66513902 | 66513950 | 66513902 | ID=Msa0037500-mRNA-1:cds;Parent=Msa0037500-mRNA-1 |
| chr1_1 | CDS | 66512077 | 66512522 | 66512077 | ID=Msa0037500-mRNA-1:cds;Parent=Msa0037500-mRNA-1 |
| chr1_1 | three_prime_UTR | 66512025 | 66512076 | 66512025 | ID=Msa0037500-mRNA-1:three_prime_utr;Parent=Msa0037500-mRNA-1 |
| Gene Sequence |
| Protein sequence |
