AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1216600


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1216600 MtrunA17_Chr4g0065981 73.494 664 81 4 29 597 12 675 0.0 994
Msa1216600 MtrunA17_Chr4g0065961 70.437 663 98 6 29 595 6 666 0.0 919
Msa1216600 MtrunA17_Chr4g0065991 77.362 508 24 3 181 597 1 508 0.0 775
Msa1216600 MtrunA17_Chr1g0205571 47.964 663 246 6 32 595 9 671 0.0 631
Msa1216600 MtrunA17_Chr4g0023331 68.127 411 40 3 278 597 5 415 0.0 546
Msa1216600 MtrunA17_Chr1g0205541 39.426 662 283 10 29 582 7 658 1.03e-164 485
Msa1216600 MtrunA17_Chr4g0023321 71.542 253 66 3 29 277 12 262 3.15e-127 374
Msa1216600 MtrunA17_Chr3g0119641 34.789 641 308 15 49 583 77 713 3.00e-126 388
Msa1216600 MtrunA17_Chr3g0117081 24.255 705 372 26 23 582 49 736 3.69e-44 168
Msa1216600 MtrunA17_Chr5g0412801 23.110 701 379 25 28 582 22 708 7.13e-43 164
Msa1216600 MtrunA17_Chr8g0368011 24.635 548 298 22 4 458 36 561 6.36e-32 130
Msa1216600 MtrunA17_Chr8g0368021 35.780 109 64 4 487 590 56 163 9.93e-13 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1216600 AT1G31710.1 45.383 639 246 9 49 584 27 665 0.0 550
Msa1216600 AT1G31690.1 44.272 646 260 8 50 595 27 672 0.0 548
Msa1216600 AT1G31670.1 43.602 633 267 10 50 595 107 736 6.81e-177 519
Msa1216600 AT4G14940.1 37.386 658 301 10 27 582 1 649 5.14e-151 450
Msa1216600 AT4G12290.1 35.364 673 303 19 41 595 76 734 3.38e-129 396
Msa1216600 AT3G43670.1 37.725 501 261 9 50 502 41 538 8.88e-105 331
Msa1216600 AT3G43670.1 61.842 76 29 0 507 582 599 674 2.22e-26 114
Msa1216600 AT1G62810.1 36.727 501 266 9 50 502 60 557 2.91e-103 328
Msa1216600 AT1G62810.1 48.958 96 47 1 502 595 611 706 3.16e-25 111
Msa1216600 AT4G12290.2 36.641 524 256 15 41 502 76 585 1.06e-100 320
Msa1216600 AT4G12280.1 38.408 289 115 6 370 595 5 293 8.48e-61 204
Msa1216600 AT4G12270.1 30.457 394 196 13 41 367 78 460 3.36e-50 180
Msa1216600 AT2G42490.1 24.356 505 280 21 41 458 70 559 2.16e-29 124

Find 128 sgRNAs with CRISPR-Local

Find 221 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGAGATACTAATAGATTTA+AGG 0.185725 8_1:+78402374 Msa1216600:CDS
GAATACTCTTTATCGGTTAA+AGG 0.216807 8_1:-78402184 None:intergenic
ATCAGGTATACTTGAAATTA+AGG 0.224441 8_1:+78404440 Msa1216600:CDS
GTTCAAAGAGAAAGAGTTAT+TGG 0.263546 8_1:+78404643 Msa1216600:CDS
TTTCTCCAAGAGATGTTAAA+TGG 0.287454 8_1:+78405234 Msa1216600:CDS
CTAGCAAGACTATGCTGTTT+TGG 0.289181 8_1:-78402787 None:intergenic
TACCTTGATCTTGATATTGA+TGG 0.305111 8_1:+78404564 Msa1216600:CDS
GTTAATGCTGCGAAACTTAA+TGG 0.307612 8_1:-78402100 None:intergenic
AAAGTAGCTTTCCACTATAT+TGG 0.311749 8_1:+78402241 Msa1216600:CDS
TAAGCATAAGGATGAGATTA+AGG 0.314074 8_1:+78404473 Msa1216600:CDS
ACAATTGTTAATCCAGTAAT+AGG 0.314445 8_1:-78402652 None:intergenic
ATAAAAGGAGAATATTTCTT+TGG 0.323640 8_1:-78402484 None:intergenic
ATTAACACTCCTCTCCTTAC+AGG 0.327355 8_1:+78402117 Msa1216600:CDS
AGGAGTCTTACGAATTCATT+AGG 0.330238 8_1:-78403508 None:intergenic
GACAAGAGAATACTCTTTAT+CGG 0.336755 8_1:-78402191 None:intergenic
GAGGATGTTGAAAATGTAAT+GGG 0.336894 8_1:-78402156 None:intergenic
AATACTCTTTATCGGTTAAA+GGG 0.340965 8_1:-78402183 None:intergenic
AGATCAATGGCCACAGTGTT+AGG 0.341442 8_1:+78402836 Msa1216600:CDS
ATATATGTGAGGCCTATTAC+TGG 0.348869 8_1:+78402640 Msa1216600:CDS
TTAACAATTGTAGTTGATCT+TGG 0.356987 8_1:+78402664 Msa1216600:CDS
ACATTCTCCATGGGATGGTT+TGG 0.358949 8_1:+78402556 Msa1216600:CDS
TGCTGAGAACACTGAATATC+AGG 0.368585 8_1:+78402738 Msa1216600:CDS
AGCTGGTGTTATAATATCAT+TGG 0.378380 8_1:+78403178 Msa1216600:CDS
AATATAGTGGAAAGCTACTT+TGG 0.381857 8_1:-78402239 None:intergenic
TACACATACCGACGGCTTGA+TGG 0.390921 8_1:-78403726 None:intergenic
AAATTAATCAACTAGTTTAG+AGG 0.391987 8_1:+78405277 Msa1216600:three_prime_UTR
CCAGGCCATTTAACATCTCT+TGG 0.400405 8_1:-78405239 None:intergenic
TTCCTCTCAAAGAAATTTGT+TGG 0.407010 8_1:-78405194 None:intergenic
TCAAAACAAAGCCCACCATT+TGG 0.413926 8_1:+78402763 Msa1216600:CDS
TTATGGATAGTTGGGCCAAT+TGG 0.415837 8_1:+78403129 Msa1216600:intron
GTATCAATGAACTCGGCATT+TGG 0.417115 8_1:-78403382 None:intergenic
CTATTAGTATCTCATGGCTT+TGG 0.418126 8_1:-78402366 None:intergenic
GAGAAGACACATTAGCTGTT+TGG 0.422613 8_1:+78404941 Msa1216600:CDS
ATTGATGATAGCAATGATAA+AGG 0.423843 8_1:-78402341 None:intergenic
TAACACTGTGGCCATTGATC+TGG 0.431893 8_1:-78402834 None:intergenic
ATGTGGCGTCACACTGAAAC+GGG 0.435240 8_1:+78403481 Msa1216600:CDS
ACTATGATAACATTATAGAT+TGG 0.436105 8_1:+78403684 Msa1216600:CDS
TTGTGTGGAATGGAAGTTGT+AGG 0.436698 8_1:-78402030 None:intergenic
TTTGGCGGACAATCACGATT+AGG 0.443595 8_1:-78403364 None:intergenic
TTTATCATTGCTATCATCAA+TGG 0.443953 8_1:+78402343 Msa1216600:CDS
GGCAACAAACATTAAGCATA+AGG 0.444443 8_1:+78404461 Msa1216600:CDS
CAAGGTAGTAGATGTAGAAA+TGG 0.454103 8_1:-78404548 None:intergenic
GTGCTCAATAGTGGCATTGT+TGG 0.460440 8_1:-78405155 None:intergenic
GTTGGGAAATCTTCCTGTGC+TGG 0.461410 8_1:-78405137 None:intergenic
TGCTCAATAGTGGCATTGTT+GGG 0.462263 8_1:-78405154 None:intergenic
CGAGGGATAGTTATAGCACT+TGG 0.462317 8_1:-78402313 None:intergenic
TATAGCTTGTGTTTGTTGTG+TGG 0.466898 8_1:-78402045 None:intergenic
AGAGGATGTTGAAAATGTAA+TGG 0.467265 8_1:-78402157 None:intergenic
AAAAGATGCTATTCTCAAAT+GGG 0.468868 8_1:+78402279 Msa1216600:CDS
CCAAGAGATGTTAAATGGCC+TGG 0.470595 8_1:+78405239 Msa1216600:CDS
GACAATGTTTACAAAGGGAA+TGG 0.472431 8_1:+78402415 Msa1216600:CDS
AACAGAAACTACGGCCTGTA+AGG 0.476918 8_1:-78402131 None:intergenic
GTTCTACATTCTCCATGGGA+TGG 0.478966 8_1:+78402551 Msa1216600:CDS
ATATAGTGGAAAGCTACTTT+GGG 0.479124 8_1:-78402238 None:intergenic
GTTTGTTCTACATTCTCCAT+GGG 0.484648 8_1:+78402547 Msa1216600:CDS
CATGTGGCGTCACACTGAAA+CGG 0.488265 8_1:+78403480 Msa1216600:CDS
TCAAATCCAGTGCTCAATAG+TGG 0.493479 8_1:-78405164 None:intergenic
CTTGTGTTTGTTGTGTGGAA+TGG 0.494286 8_1:-78402040 None:intergenic
CTTTGGAAGTTCTATTGCAA+TGG 0.494691 8_1:-78402467 None:intergenic
CTATGATAACATTATAGATT+GGG 0.499778 8_1:+78403685 Msa1216600:CDS
TACCATCAATATCAAGATCA+AGG 0.501730 8_1:-78404566 None:intergenic
ACAGCATTCTTCAAGAGGAT+TGG 0.502027 8_1:-78403430 None:intergenic
TGTGTACAGATAGCATTATC+AGG 0.504493 8_1:+78404423 Msa1216600:intron
TCCTATGTGAAACTTCCAAT+TGG 0.506455 8_1:-78403144 None:intergenic
CTACTTTGGGATATTTGTGT+AGG 0.507960 8_1:-78402225 None:intergenic
TCTCTGACAATGTTTACAAA+GGG 0.510218 8_1:+78402410 Msa1216600:CDS
TGTTTGTTCTACATTCTCCA+TGG 0.514594 8_1:+78402546 Msa1216600:CDS
AGTCATCAACCACAAGGTCC+TGG 0.514830 8_1:+78402808 Msa1216600:CDS
AATTAATCAACTAGTTTAGA+GGG 0.516575 8_1:+78405278 Msa1216600:three_prime_UTR
GGCCAACAAATTTCTTTGAG+AGG 0.517023 8_1:+78405192 Msa1216600:CDS
TACTAATAGATTTAAGGTTG+AGG 0.524628 8_1:+78402380 Msa1216600:CDS
GTCTCTGACAATGTTTACAA+AGG 0.525940 8_1:+78402409 Msa1216600:CDS
TGGCCATTGATCTGGAAGCC+AGG 0.527286 8_1:-78402826 None:intergenic
TTAAATCTATTAGTATCTCA+TGG 0.527636 8_1:-78402372 None:intergenic
CACAGACAGCATTCTTCAAG+AGG 0.531185 8_1:-78403435 None:intergenic
TTTGTGCTTCTCTAGATCGT+AGG 0.533514 8_1:-78403207 None:intergenic
GGAAGATTTACATGGTACAT+TGG 0.533925 8_1:+78404494 Msa1216600:CDS
GGTCCTGGCTTCCAGATCAA+TGG 0.536411 8_1:+78402823 Msa1216600:CDS
GGTCATCTAGGCCAATATAG+TGG 0.537223 8_1:-78402252 None:intergenic
ATTGTGATGTGGCATGTAGT+TGG 0.538927 8_1:+78405101 Msa1216600:CDS
CCTCACTATCAAGTTTACTT+CGG 0.542921 8_1:-78403642 None:intergenic
AATTCATCATGTTCCAGCAC+AGG 0.544164 8_1:+78405124 Msa1216600:CDS
TCTTGGTCTTATGAAAATTG+TGG 0.560842 8_1:+78402681 Msa1216600:CDS
TCACAATTTGGGCTAGCCCC+AGG 0.561797 8_1:+78404709 Msa1216600:CDS
TGAGCACTGGATTTGAGTTG+AGG 0.563016 8_1:+78405171 Msa1216600:CDS
TTGTTCATCAACAGATAGTG+TGG 0.566087 8_1:-78402443 None:intergenic
AAATTGTGGAGTATCATGAC+AGG 0.567664 8_1:+78402695 Msa1216600:CDS
TGTTCATCAACAGATAGTGT+GGG 0.575347 8_1:-78402442 None:intergenic
GCTGCGAAACTTAATGGTGG+TGG 0.577380 8_1:-78402094 None:intergenic
CAGCTAATGTGTCTTCTCCA+TGG 0.582688 8_1:-78404936 None:intergenic
AAGACAATAAGAATCACTGA+TGG 0.587046 8_1:+78404618 Msa1216600:CDS
GATTGGGAGTTCAAAGCAAG+TGG 0.587646 8_1:+78403701 Msa1216600:CDS
ACAATGCCACTATTGAGCAC+TGG 0.590717 8_1:+78405158 Msa1216600:CDS
TAATGGGGTAACAGAAACTA+CGG 0.592115 8_1:-78402140 None:intergenic
CCGAAGTAAACTTGATAGTG+AGG 0.594497 8_1:+78403642 Msa1216600:CDS
ATCTGGAAGCCAGGACCTTG+TGG 0.595509 8_1:-78402817 None:intergenic
TTATCGGTTAAAGGGTCAAG+AGG 0.595698 8_1:-78402175 None:intergenic
TTGGTGTCAGAAAACAGCAT+TGG 0.599444 8_1:+78404513 Msa1216600:CDS
CTATATGTTGATCATAGCCA+TGG 0.600693 8_1:+78404919 Msa1216600:CDS
AGTAGATGTAGAAATGGTCA+TGG 0.603707 8_1:-78404542 None:intergenic
AAGAGAGTAGAAGGACTGTG+AGG 0.608183 8_1:+78402584 Msa1216600:CDS
GTGAGGAGTGTAGTTACTGT+GGG 0.609666 8_1:+78403659 Msa1216600:CDS
TCAATGAACTCGGCATTTGG+CGG 0.610306 8_1:-78403379 None:intergenic
GAGATTAAGGAAGATTTACA+TGG 0.612657 8_1:+78404486 Msa1216600:CDS
CTTAGCAGTTTGAGTCTCAG+TGG 0.614126 8_1:-78404667 None:intergenic
ATAGGATTTGATGTACGAGC+TGG 0.615078 8_1:+78403161 Msa1216600:CDS
TATGTTATTATTCTCCCACA+TGG 0.624540 8_1:-78405381 None:intergenic
ACATACACACACTCAGCAGA+GGG 0.625268 8_1:+78403403 Msa1216600:CDS
GAATAGAGACATTGTGAACA+AGG 0.629687 8_1:+78405076 Msa1216600:CDS
TATTCAGTGTTCTCAGCAGT+AGG 0.635301 8_1:-78402733 None:intergenic
AACAATATAATAGTATCATG+TGG 0.640039 8_1:+78403464 Msa1216600:CDS
GTTCATCAACAGATAGTGTG+GGG 0.643213 8_1:-78402441 None:intergenic
AAGTGGTTCCATCAAGCCGT+CGG 0.643619 8_1:+78403718 Msa1216600:CDS
TACATACACACACTCAGCAG+AGG 0.649899 8_1:+78403402 Msa1216600:CDS
GCCAATTGGAAGTTTCACAT+AGG 0.650338 8_1:+78403143 Msa1216600:CDS
GCAATGATAAAGGCTTTACG+AGG 0.651377 8_1:-78402331 None:intergenic
AAACTACGGCCTGTAAGGAG+AGG 0.651538 8_1:-78402126 None:intergenic
ACAGTGTGAATATATATGTG+AGG 0.665308 8_1:+78402629 Msa1216600:CDS
AGGATGTTGAAAATGTAATG+GGG 0.669038 8_1:-78402155 None:intergenic
CTTGCTAGTCATCAACCACA+AGG 0.670137 8_1:+78402802 Msa1216600:CDS
AATTGTGGAGTATCATGACA+GGG 0.679727 8_1:+78402696 Msa1216600:CDS
GAGCTCAAGCTAGCTCACAA+TGG 0.683695 8_1:+78402068 Msa1216600:CDS
AGTGAGGAGTGTAGTTACTG+TGG 0.688650 8_1:+78403658 Msa1216600:CDS
TGTGTATGTATCAATGAACT+CGG 0.691775 8_1:-78403389 None:intergenic
CAATGATAAAGGCTTTACGA+GGG 0.694292 8_1:-78402330 None:intergenic
TGAACAAGGACATTGTGATG+TGG 0.719496 8_1:+78405090 Msa1216600:CDS
AATGCTGCGAAACTTAATGG+TGG 0.762795 8_1:-78402097 None:intergenic
ATGAACATTACCTAACACTG+TGG 0.776443 8_1:-78402846 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATTATATATTTATTTA+TGG + chr8_1:78403112-78403131 Msa1216600:intron 0.0%
!! ATATATGCAAAAAAAAAAAA+AGG - chr8_1:78403057-78403076 None:intergenic 10.0%
!! TATATTTATTTATGGATAGT+TGG + chr8_1:78403120-78403139 Msa1216600:intron 15.0%
!! ATATTTATTTATGGATAGTT+GGG + chr8_1:78403121-78403140 Msa1216600:intron 15.0%
!!! AAATTGTTTTTACAGAAAAA+GGG - chr8_1:78404255-78404274 None:intergenic 15.0%
!! TCACAATTCATTATTAAAAA+GGG - chr8_1:78404282-78404301 None:intergenic 15.0%
!!! ATGACCAATATTATTTTATA+TGG + chr8_1:78404400-78404419 Msa1216600:intron 15.0%
!! TTATAATAGAACTGAAAAAT+GGG + chr8_1:78404888-78404907 Msa1216600:intron 15.0%
!!! ATTTAAGTAATCATACTTTT+TGG - chr8_1:78404968-78404987 None:intergenic 15.0%
!! GATTACTATACTAATTAATT+TGG + chr8_1:78405027-78405046 Msa1216600:intron 15.0%
!!! TTAATTTGGACTTTTTTTAA+TGG + chr8_1:78405041-78405060 Msa1216600:intron 15.0%
!!! TTGATTAATTTTTTTACTTG+GGG - chr8_1:78405268-78405287 None:intergenic 15.0%
!!! GTTGATTAATTTTTTTACTT+GGG - chr8_1:78405269-78405288 None:intergenic 15.0%
!!! AGTTGATTAATTTTTTTACT+TGG - chr8_1:78405270-78405289 None:intergenic 15.0%
!! TTAAATCTATTAGTATCTCA+TGG - chr8_1:78402375-78402394 None:intergenic 20.0%
!! ATGAGATACTAATAGATTTA+AGG + chr8_1:78402374-78402393 Msa1216600:CDS 20.0%
!! ATAAAAGGAGAATATTTCTT+TGG - chr8_1:78402487-78402506 None:intergenic 20.0%
!! TTAAAGTAAAATTCATCAGA+TGG - chr8_1:78403289-78403308 None:intergenic 20.0%
!! AACAATATAATAGTATCATG+TGG + chr8_1:78403464-78403483 Msa1216600:CDS 20.0%
!! ACTATGATAACATTATAGAT+TGG + chr8_1:78403684-78403703 Msa1216600:CDS 20.0%
!! CTATGATAACATTATAGATT+GGG + chr8_1:78403685-78403704 Msa1216600:CDS 20.0%
!!! AATTTAGTTCTTTTCAACTA+TGG + chr8_1:78403766-78403785 Msa1216600:intron 20.0%
!! AGTTGTTTGAATAAATTTAG+CGG + chr8_1:78403823-78403842 Msa1216600:intron 20.0%
!!! TTTTAGTATTTGACAGAAAA+AGG - chr8_1:78404062-78404081 None:intergenic 20.0%
!!! CAAATTGTTTTTACAGAAAA+AGG - chr8_1:78404256-78404275 None:intergenic 20.0%
!!! CTTTTTCTGTAAAAACAATT+TGG + chr8_1:78404254-78404273 Msa1216600:intron 20.0%
!! CTCACAATTCATTATTAAAA+AGG - chr8_1:78404283-78404302 None:intergenic 20.0%
!!! TAATTAAAAAGTGTACTAGT+TGG - chr8_1:78404369-78404388 None:intergenic 20.0%
!! CACACCATATAAAATAATAT+TGG - chr8_1:78404407-78404426 None:intergenic 20.0%
!! TTTCACTAATTACAATGTTT+GGG + chr8_1:78404858-78404877 Msa1216600:intron 20.0%
!!! CATTTTTCAGTTCTATTATA+AGG - chr8_1:78404889-78404908 None:intergenic 20.0%
!! CTTATAATAGAACTGAAAAA+TGG + chr8_1:78404887-78404906 Msa1216600:intron 20.0%
!!! TTTTTAATGGAAATATTTGC+AGG + chr8_1:78405054-78405073 Msa1216600:intron 20.0%
!!! AAATTAATCAACTAGTTTAG+AGG + chr8_1:78405277-78405296 Msa1216600:three_prime_UTR 20.0%
!!! AATTAATCAACTAGTTTAGA+GGG + chr8_1:78405278-78405297 Msa1216600:three_prime_UTR 20.0%
!! AATACTCTTTATCGGTTAAA+GGG - chr8_1:78402186-78402205 None:intergenic 25.0%
!!! ATTTGTGTAGGACTATTTTT+TGG - chr8_1:78402216-78402235 None:intergenic 25.0%
! AAAAAGATGCTATTCTCAAA+TGG + chr8_1:78402278-78402297 Msa1216600:CDS 25.0%
! AAAAGATGCTATTCTCAAAT+GGG + chr8_1:78402279-78402298 Msa1216600:CDS 25.0%
!! ATTGATGATAGCAATGATAA+AGG - chr8_1:78402344-78402363 None:intergenic 25.0%
! TTTATCATTGCTATCATCAA+TGG + chr8_1:78402343-78402362 Msa1216600:CDS 25.0%
!! TACTAATAGATTTAAGGTTG+AGG + chr8_1:78402380-78402399 Msa1216600:CDS 25.0%
! ACAATTGTTAATCCAGTAAT+AGG - chr8_1:78402655-78402674 None:intergenic 25.0%
! TTAACAATTGTAGTTGATCT+TGG + chr8_1:78402664-78402683 Msa1216600:CDS 25.0%
!! TTTTGCATATATTCTTGACT+TGG + chr8_1:78403065-78403084 Msa1216600:intron 25.0%
!! ATCTCGTAGAGTATTATAAA+AGG + chr8_1:78403229-78403248 Msa1216600:intron 25.0%
! ATGCATAGAGTAAGTAATTA+AGG - chr8_1:78403531-78403550 None:intergenic 25.0%
! TCTGTCAAAATATCATTATG+TGG - chr8_1:78403607-78403626 None:intergenic 25.0%
!!! TGAATAAATTTAGCGGATTT+TGG + chr8_1:78403830-78403849 Msa1216600:intron 25.0%
!!! GAAGGAACATTTTTTGAAAA+AGG + chr8_1:78403855-78403874 Msa1216600:intron 25.0%
! ACATAGGAAATGTCAAATTT+GGG - chr8_1:78404164-78404183 None:intergenic 25.0%
! AATCAAAAAAGCAAAGTAGT+TGG - chr8_1:78404189-78404208 None:intergenic 25.0%
! TTGTATCTTTCAATGTTACA+TGG + chr8_1:78404212-78404231 Msa1216600:intron 25.0%
! ATAATGAATTGTGAGAAACA+TGG + chr8_1:78404288-78404307 Msa1216600:intron 25.0%
! ATCAGGTATACTTGAAATTA+AGG + chr8_1:78404440-78404459 Msa1216600:CDS 25.0%
! AGATGCAAAAATCACAATTT+GGG + chr8_1:78404698-78404717 Msa1216600:CDS 25.0%
! TAATCATCTTCAGTTAAAAG+TGG - chr8_1:78404820-78404839 None:intergenic 25.0%
! CTTTCACTAATTACAATGTT+TGG + chr8_1:78404857-78404876 Msa1216600:intron 25.0%
! CTCTTTCACAAATAACAATA+CGG - chr8_1:78405338-78405357 None:intergenic 25.0%
!!! TTGTTTTGTTTATTCCATGT+GGG + chr8_1:78405367-78405386 Msa1216600:three_prime_UTR 25.0%
AGGATGTTGAAAATGTAATG+GGG - chr8_1:78402158-78402177 None:intergenic 30.0%
GAGGATGTTGAAAATGTAAT+GGG - chr8_1:78402159-78402178 None:intergenic 30.0%
AGAGGATGTTGAAAATGTAA+TGG - chr8_1:78402160-78402179 None:intergenic 30.0%
! GAATACTCTTTATCGGTTAA+AGG - chr8_1:78402187-78402206 None:intergenic 30.0%
GACAAGAGAATACTCTTTAT+CGG - chr8_1:78402194-78402213 None:intergenic 30.0%
! ATATAGTGGAAAGCTACTTT+GGG - chr8_1:78402241-78402260 None:intergenic 30.0%
! AATATAGTGGAAAGCTACTT+TGG - chr8_1:78402242-78402261 None:intergenic 30.0%
AAAGTAGCTTTCCACTATAT+TGG + chr8_1:78402241-78402260 Msa1216600:CDS 30.0%
!! TGAGAATAGCATCTTTTTCA+GGG - chr8_1:78402276-78402295 None:intergenic 30.0%
! TTGAGAATAGCATCTTTTTC+AGG - chr8_1:78402277-78402296 None:intergenic 30.0%
TCTCTGACAATGTTTACAAA+GGG + chr8_1:78402410-78402429 Msa1216600:CDS 30.0%
! TTTTTCACTGAGGCAATAAA+AGG - chr8_1:78402502-78402521 None:intergenic 30.0%
ACAGTGTGAATATATATGTG+AGG + chr8_1:78402629-78402648 Msa1216600:CDS 30.0%
!! TCTTGGTCTTATGAAAATTG+TGG + chr8_1:78402681-78402700 Msa1216600:CDS 30.0%
! GTTCATTCCTTAGTACATTT+TGG + chr8_1:78402863-78402882 Msa1216600:intron 30.0%
!! AGCTGGTGTTATAATATCAT+TGG + chr8_1:78403178-78403197 Msa1216600:CDS 30.0%
! TTTAAGACTTTCTTTGATGC+TGG + chr8_1:78403304-78403323 Msa1216600:intron 30.0%
TGTGTATGTATCAATGAACT+CGG - chr8_1:78403392-78403411 None:intergenic 30.0%
AATGAAATTACACATACCGA+CGG - chr8_1:78403737-78403756 None:intergenic 30.0%
!!! ATAAATTTAGCGGATTTTGG+TGG + chr8_1:78403833-78403852 Msa1216600:intron 30.0%
! GCGGAACATATATAGTTTTT+AGG - chr8_1:78403901-78403920 None:intergenic 30.0%
!! TACACTTTTTAAATGACACG+CGG - chr8_1:78403920-78403939 None:intergenic 30.0%
GTCGCGATTCATTATTAAAA+GGG - chr8_1:78404092-78404111 None:intergenic 30.0%
TGTCGCGATTCATTATTAAA+AGG - chr8_1:78404093-78404112 None:intergenic 30.0%
GACATAGGAAATGTCAAATT+TGG - chr8_1:78404165-78404184 None:intergenic 30.0%
GACAAAGGATATGTCAAATT+AGG - chr8_1:78404340-78404359 None:intergenic 30.0%
TAAGCATAAGGATGAGATTA+AGG + chr8_1:78404473-78404492 Msa1216600:CDS 30.0%
GAGATTAAGGAAGATTTACA+TGG + chr8_1:78404486-78404505 Msa1216600:CDS 30.0%
TACCTTGATCTTGATATTGA+TGG + chr8_1:78404564-78404583 Msa1216600:CDS 30.0%
TACCATCAATATCAAGATCA+AGG - chr8_1:78404569-78404588 None:intergenic 30.0%
AAGACAATAAGAATCACTGA+TGG + chr8_1:78404618-78404637 Msa1216600:CDS 30.0%
GTTCAAAGAGAAAGAGTTAT+TGG + chr8_1:78404643-78404662 Msa1216600:CDS 30.0%
CAGATGCAAAAATCACAATT+TGG + chr8_1:78404697-78404716 Msa1216600:CDS 30.0%
TTCCTCTCAAAGAAATTTGT+TGG - chr8_1:78405197-78405216 None:intergenic 30.0%
TTTCTCCAAGAGATGTTAAA+TGG + chr8_1:78405234-78405253 Msa1216600:CDS 30.0%
!!! GTTGTTTTGTTTATTCCATG+TGG + chr8_1:78405366-78405385 Msa1216600:three_prime_UTR 30.0%
TATGTTATTATTCTCCCACA+TGG - chr8_1:78405384-78405403 None:intergenic 30.0%
!! TATAGCTTGTGTTTGTTGTG+TGG - chr8_1:78402048-78402067 None:intergenic 35.0%
GTTAATGCTGCGAAACTTAA+TGG - chr8_1:78402103-78402122 None:intergenic 35.0%
TAATGGGGTAACAGAAACTA+CGG - chr8_1:78402143-78402162 None:intergenic 35.0%
!! CTACTTTGGGATATTTGTGT+AGG - chr8_1:78402228-78402247 None:intergenic 35.0%
CAATGATAAAGGCTTTACGA+GGG - chr8_1:78402333-78402352 None:intergenic 35.0%
CTATTAGTATCTCATGGCTT+TGG - chr8_1:78402369-78402388 None:intergenic 35.0%
GTCTCTGACAATGTTTACAA+AGG + chr8_1:78402409-78402428 Msa1216600:CDS 35.0%
GACAATGTTTACAAAGGGAA+TGG + chr8_1:78402415-78402434 Msa1216600:CDS 35.0%
TGTTCATCAACAGATAGTGT+GGG - chr8_1:78402445-78402464 None:intergenic 35.0%
TTGTTCATCAACAGATAGTG+TGG - chr8_1:78402446-78402465 None:intergenic 35.0%
! CTTTGGAAGTTCTATTGCAA+TGG - chr8_1:78402470-78402489 None:intergenic 35.0%
TGTTTGTTCTACATTCTCCA+TGG + chr8_1:78402546-78402565 Msa1216600:CDS 35.0%
GTTTGTTCTACATTCTCCAT+GGG + chr8_1:78402547-78402566 Msa1216600:CDS 35.0%
TTGGAGAAAAAGAGAGTAGA+AGG + chr8_1:78402575-78402594 Msa1216600:CDS 35.0%
ATATATGTGAGGCCTATTAC+TGG + chr8_1:78402640-78402659 Msa1216600:CDS 35.0%
! AAATTGTGGAGTATCATGAC+AGG + chr8_1:78402695-78402714 Msa1216600:CDS 35.0%
! AATTGTGGAGTATCATGACA+GGG + chr8_1:78402696-78402715 Msa1216600:CDS 35.0%
ATGAACATTACCTAACACTG+TGG - chr8_1:78402849-78402868 None:intergenic 35.0%
! CATTCCTTAGTACATTTTGG+TGG + chr8_1:78402866-78402885 Msa1216600:intron 35.0%
TATGCCACCAAAATGTACTA+AGG - chr8_1:78402873-78402892 None:intergenic 35.0%
TCCTATGTGAAACTTCCAAT+TGG - chr8_1:78403147-78403166 None:intergenic 35.0%
TCATCAGATGGATCTTGATA+TGG - chr8_1:78403277-78403296 None:intergenic 35.0%
! GTTTGGATTTGGTTAGTCAA+CGG + chr8_1:78403330-78403349 Msa1216600:intron 35.0%
AGGAGTCTTACGAATTCATT+AGG - chr8_1:78403511-78403530 None:intergenic 35.0%
CCTCACTATCAAGTTTACTT+CGG - chr8_1:78403645-78403664 None:intergenic 35.0%
ACTAGTTGGAGTTTAGACAA+AGG - chr8_1:78404355-78404374 None:intergenic 35.0%
TGTGTACAGATAGCATTATC+AGG + chr8_1:78404423-78404442 Msa1216600:intron 35.0%
GGCAACAAACATTAAGCATA+AGG + chr8_1:78404461-78404480 Msa1216600:CDS 35.0%
GGAAGATTTACATGGTACAT+TGG + chr8_1:78404494-78404513 Msa1216600:CDS 35.0%
AGTAGATGTAGAAATGGTCA+TGG - chr8_1:78404545-78404564 None:intergenic 35.0%
CAAGGTAGTAGATGTAGAAA+TGG - chr8_1:78404551-78404570 None:intergenic 35.0%
TAACAAATGCAAGTTCACCT+GGG - chr8_1:78404729-78404748 None:intergenic 35.0%
TTAACAAATGCAAGTTCACC+TGG - chr8_1:78404730-78404749 None:intergenic 35.0%
GTATCCAACTTCATTACCAA+CGG - chr8_1:78404770-78404789 None:intergenic 35.0%
GATGATTATCCACAAATACG+TGG + chr8_1:78404832-78404851 Msa1216600:intron 35.0%
AATAGAACTGAAAAATGGGC+TGG + chr8_1:78404892-78404911 Msa1216600:intron 35.0%
CTATATGTTGATCATAGCCA+TGG + chr8_1:78404919-78404938 Msa1216600:CDS 35.0%
GAATAGAGACATTGTGAACA+AGG + chr8_1:78405076-78405095 Msa1216600:CDS 35.0%
!!! GGAGAAAGTGTTTTAAGAAC+AGG - chr8_1:78405221-78405240 None:intergenic 35.0%
TTGTGTGGAATGGAAGTTGT+AGG - chr8_1:78402033-78402052 None:intergenic 40.0%
!! CTTGTGTTTGTTGTGTGGAA+TGG - chr8_1:78402043-78402062 None:intergenic 40.0%
AATGCTGCGAAACTTAATGG+TGG - chr8_1:78402100-78402119 None:intergenic 40.0%
ATTAACACTCCTCTCCTTAC+AGG + chr8_1:78402117-78402136 Msa1216600:CDS 40.0%
! TTATCGGTTAAAGGGTCAAG+AGG - chr8_1:78402178-78402197 None:intergenic 40.0%
!!! CATCTTTTTCAGGGTCATCT+AGG - chr8_1:78402267-78402286 None:intergenic 40.0%
GCAATGATAAAGGCTTTACG+AGG - chr8_1:78402334-78402353 None:intergenic 40.0%
GTTCATCAACAGATAGTGTG+GGG - chr8_1:78402444-78402463 None:intergenic 40.0%
ATTGCCTCAGTGAAAAAGAG+AGG + chr8_1:78402505-78402524 Msa1216600:CDS 40.0%
! TTTTTCTCCAAACCATCCCA+TGG - chr8_1:78402566-78402585 None:intergenic 40.0%
TATTCAGTGTTCTCAGCAGT+AGG - chr8_1:78402736-78402755 None:intergenic 40.0%
TGCTGAGAACACTGAATATC+AGG + chr8_1:78402738-78402757 Msa1216600:CDS 40.0%
TCAAAACAAAGCCCACCATT+TGG + chr8_1:78402763-78402782 Msa1216600:CDS 40.0%
!!! CTATGCTGTTTTGGTCCAAA+TGG - chr8_1:78402781-78402800 None:intergenic 40.0%
!! CTAGCAAGACTATGCTGTTT+TGG - chr8_1:78402790-78402809 None:intergenic 40.0%
TTATGGATAGTTGGGCCAAT+TGG + chr8_1:78403129-78403148 Msa1216600:intron 40.0%
GCCAATTGGAAGTTTCACAT+AGG + chr8_1:78403143-78403162 Msa1216600:CDS 40.0%
ATAGGATTTGATGTACGAGC+TGG + chr8_1:78403161-78403180 Msa1216600:CDS 40.0%
TTTGTGCTTCTCTAGATCGT+AGG - chr8_1:78403210-78403229 None:intergenic 40.0%
TTCTTTGATGCTGGAGAGTT+TGG + chr8_1:78403313-78403332 Msa1216600:intron 40.0%
GTATCAATGAACTCGGCATT+TGG - chr8_1:78403385-78403404 None:intergenic 40.0%
ACAGCATTCTTCAAGAGGAT+TGG - chr8_1:78403433-78403452 None:intergenic 40.0%
!! CCGAAGTAAACTTGATAGTG+AGG + chr8_1:78403642-78403661 Msa1216600:CDS 40.0%
!!! ATTTAGCGGATTTTGGTGGA+AGG + chr8_1:78403837-78403856 Msa1216600:intron 40.0%
AGCAAAGTAGTTGGAGACAT+AGG - chr8_1:78404180-78404199 None:intergenic 40.0%
!! TTGGTGTCAGAAAACAGCAT+TGG + chr8_1:78404513-78404532 Msa1216600:CDS 40.0%
AACAAATGCAAGTTCACCTG+GGG - chr8_1:78404728-78404747 None:intergenic 40.0%
!!! CCAACGGCAGTTTTTTTGTT+TGG - chr8_1:78404754-78404773 None:intergenic 40.0%
CCAAACAAAAAAACTGCCGT+TGG + chr8_1:78404751-78404770 Msa1216600:intron 40.0%
CTGGAATTGCTGGAATCAAA+CGG - chr8_1:78404792-78404811 None:intergenic 40.0%
TCAGTTAAAAGTGGATGAGC+TGG - chr8_1:78404811-78404830 None:intergenic 40.0%
GAGAAGACACATTAGCTGTT+TGG + chr8_1:78404941-78404960 Msa1216600:CDS 40.0%
TGAACAAGGACATTGTGATG+TGG + chr8_1:78405090-78405109 Msa1216600:CDS 40.0%
ATTGTGATGTGGCATGTAGT+TGG + chr8_1:78405101-78405120 Msa1216600:CDS 40.0%
AATTCATCATGTTCCAGCAC+AGG + chr8_1:78405124-78405143 Msa1216600:CDS 40.0%
TGCTCAATAGTGGCATTGTT+GGG - chr8_1:78405157-78405176 None:intergenic 40.0%
TCAAATCCAGTGCTCAATAG+TGG - chr8_1:78405167-78405186 None:intergenic 40.0%
GGCCAACAAATTTCTTTGAG+AGG + chr8_1:78405192-78405211 Msa1216600:CDS 40.0%
!!! TTTTTTTACTTGGGGCAACC+AGG - chr8_1:78405260-78405279 None:intergenic 40.0%
AACAGAAACTACGGCCTGTA+AGG - chr8_1:78402134-78402153 None:intergenic 45.0%
GGTCATCTAGGCCAATATAG+TGG - chr8_1:78402255-78402274 None:intergenic 45.0%
CGAGGGATAGTTATAGCACT+TGG - chr8_1:78402316-78402335 None:intergenic 45.0%
!! CAAGCCTCTCTTTTTCACTG+AGG - chr8_1:78402512-78402531 None:intergenic 45.0%
GTTCTACATTCTCCATGGGA+TGG + chr8_1:78402551-78402570 Msa1216600:CDS 45.0%
ACATTCTCCATGGGATGGTT+TGG + chr8_1:78402556-78402575 Msa1216600:CDS 45.0%
AAGAGAGTAGAAGGACTGTG+AGG + chr8_1:78402584-78402603 Msa1216600:CDS 45.0%
!!! GCTGTTTTGGTCCAAATGGT+GGG - chr8_1:78402777-78402796 None:intergenic 45.0%
!!! TGCTGTTTTGGTCCAAATGG+TGG - chr8_1:78402778-78402797 None:intergenic 45.0%
CTTGCTAGTCATCAACCACA+AGG + chr8_1:78402802-78402821 Msa1216600:CDS 45.0%
TAACACTGTGGCCATTGATC+TGG - chr8_1:78402837-78402856 None:intergenic 45.0%
AGATCAATGGCCACAGTGTT+AGG + chr8_1:78402836-78402855 Msa1216600:CDS 45.0%
GATGCTGGAGAGTTTGGATT+TGG + chr8_1:78403319-78403338 Msa1216600:intron 45.0%
! TTTGGCGGACAATCACGATT+AGG - chr8_1:78403367-78403386 None:intergenic 45.0%
TCAATGAACTCGGCATTTGG+CGG - chr8_1:78403382-78403401 None:intergenic 45.0%
TACATACACACACTCAGCAG+AGG + chr8_1:78403402-78403421 Msa1216600:CDS 45.0%
ACATACACACACTCAGCAGA+GGG + chr8_1:78403403-78403422 Msa1216600:CDS 45.0%
CACAGACAGCATTCTTCAAG+AGG - chr8_1:78403438-78403457 None:intergenic 45.0%
! AGTGAGGAGTGTAGTTACTG+TGG + chr8_1:78403658-78403677 Msa1216600:CDS 45.0%
! GTGAGGAGTGTAGTTACTGT+GGG + chr8_1:78403659-78403678 Msa1216600:CDS 45.0%
GATTGGGAGTTCAAAGCAAG+TGG + chr8_1:78403701-78403720 Msa1216600:CDS 45.0%
CTTAGCAGTTTGAGTCTCAG+TGG - chr8_1:78404670-78404689 None:intergenic 45.0%
!! ACTGCCGTTGGTAATGAAGT+TGG + chr8_1:78404763-78404782 Msa1216600:intron 45.0%
!! GTGAAAGCACCACGTATTTG+TGG - chr8_1:78404844-78404863 None:intergenic 45.0%
!! AGAACTGAAAAATGGGCTGG+TGG + chr8_1:78404895-78404914 Msa1216600:intron 45.0%
CAGCTAATGTGTCTTCTCCA+TGG - chr8_1:78404939-78404958 None:intergenic 45.0%
GTGCTCAATAGTGGCATTGT+TGG - chr8_1:78405158-78405177 None:intergenic 45.0%
ACAATGCCACTATTGAGCAC+TGG + chr8_1:78405158-78405177 Msa1216600:CDS 45.0%
!! TGAGCACTGGATTTGAGTTG+AGG + chr8_1:78405171-78405190 Msa1216600:CDS 45.0%
CCAGGCCATTTAACATCTCT+TGG - chr8_1:78405242-78405261 None:intergenic 45.0%
CCAAGAGATGTTAAATGGCC+TGG + chr8_1:78405239-78405258 Msa1216600:CDS 45.0%
!!! TTAAATTTTAAAATAAGATT+CGG - chr8_1:78404025-78404044 None:intergenic 5.0%
GAGCTCAAGCTAGCTCACAA+TGG + chr8_1:78402068-78402087 Msa1216600:CDS 50.0%
GCTGCGAAACTTAATGGTGG+TGG - chr8_1:78402097-78402116 None:intergenic 50.0%
AAACTACGGCCTGTAAGGAG+AGG - chr8_1:78402129-78402148 None:intergenic 50.0%
AGTCATCAACCACAAGGTCC+TGG + chr8_1:78402808-78402827 Msa1216600:CDS 50.0%
CATGTGGCGTCACACTGAAA+CGG + chr8_1:78403480-78403499 Msa1216600:CDS 50.0%
ATGTGGCGTCACACTGAAAC+GGG + chr8_1:78403481-78403500 Msa1216600:CDS 50.0%
AAGTGGTTCCATCAAGCCGT+CGG + chr8_1:78403718-78403737 Msa1216600:CDS 50.0%
TACACATACCGACGGCTTGA+TGG - chr8_1:78403729-78403748 None:intergenic 50.0%
AGTGGATGAGCTGGAATTGC+TGG - chr8_1:78404802-78404821 None:intergenic 50.0%
GTTGGGAAATCTTCCTGTGC+TGG - chr8_1:78405140-78405159 None:intergenic 50.0%
ATCTGGAAGCCAGGACCTTG+TGG - chr8_1:78402820-78402839 None:intergenic 55.0%
GGTCCTGGCTTCCAGATCAA+TGG + chr8_1:78402823-78402842 Msa1216600:CDS 55.0%
TGGCCATTGATCTGGAAGCC+AGG - chr8_1:78402829-78402848 None:intergenic 55.0%
!! TCACAATTTGGGCTAGCCCC+AGG + chr8_1:78404709-78404728 Msa1216600:CDS 55.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 78402025 78405427 78402025 ID=Msa1216600;Name=Msa1216600
chr8_1 mRNA 78402025 78405427 78402025 ID=Msa1216600-mRNA-1;Parent=Msa1216600;Name=Msa1216600-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0.71|0.37|1|0.85|0.75|8|107|597
chr8_1 exon 78402025 78402857 78402025 ID=Msa1216600-mRNA-1:exon:27148;Parent=Msa1216600-mRNA-1
chr8_1 exon 78403139 78403238 78403139 ID=Msa1216600-mRNA-1:exon:27149;Parent=Msa1216600-mRNA-1
chr8_1 exon 78403346 78403519 78403346 ID=Msa1216600-mRNA-1:exon:27150;Parent=Msa1216600-mRNA-1
chr8_1 exon 78403626 78403739 78403626 ID=Msa1216600-mRNA-1:exon:27151;Parent=Msa1216600-mRNA-1
chr8_1 exon 78404432 78404730 78404432 ID=Msa1216600-mRNA-1:exon:27152;Parent=Msa1216600-mRNA-1
chr8_1 exon 78404897 78404971 78404897 ID=Msa1216600-mRNA-1:exon:27153;Parent=Msa1216600-mRNA-1
chr8_1 exon 78405076 78405302 78405076 ID=Msa1216600-mRNA-1:exon:27154;Parent=Msa1216600-mRNA-1
chr8_1 exon 78405349 78405427 78405349 ID=Msa1216600-mRNA-1:exon:27155;Parent=Msa1216600-mRNA-1
chr8_1 CDS 78402025 78402857 78402025 ID=Msa1216600-mRNA-1:cds;Parent=Msa1216600-mRNA-1
chr8_1 CDS 78403139 78403238 78403139 ID=Msa1216600-mRNA-1:cds;Parent=Msa1216600-mRNA-1
chr8_1 CDS 78403346 78403519 78403346 ID=Msa1216600-mRNA-1:cds;Parent=Msa1216600-mRNA-1
chr8_1 CDS 78403626 78403739 78403626 ID=Msa1216600-mRNA-1:cds;Parent=Msa1216600-mRNA-1
chr8_1 CDS 78404432 78404730 78404432 ID=Msa1216600-mRNA-1:cds;Parent=Msa1216600-mRNA-1
chr8_1 CDS 78404897 78404971 78404897 ID=Msa1216600-mRNA-1:cds;Parent=Msa1216600-mRNA-1
chr8_1 CDS 78405076 78405274 78405076 ID=Msa1216600-mRNA-1:cds;Parent=Msa1216600-mRNA-1
chr8_1 three_prime_UTR 78405275 78405302 78405275 ID=Msa1216600-mRNA-1:three_prime_utr;Parent=Msa1216600-mRNA-1
chr8_1 three_prime_UTR 78405349 78405427 78405349 ID=Msa1216600-mRNA-1:three_prime_utr;Parent=Msa1216600-mRNA-1
Gene Sequence

>Msa1216600

CATCACCTACAACTTCCATTCCACACAACAAACACAAGCTATAGAGCTCAAGCTAGCTCACAATGGCTTCCACCACCATTAAGTTTCGCAGCATTAACACTCCTCTCCTTACAGGCCGTAGTTTCTGTTACCCCATTACATTTTCAACATCCTCTTGACCCTTTAACCGATAAAGAGTATTCTCTTGTCCAAAAAATAGTCCTACACAAATATCCCAAAGTAGCTTTCCACTATATTGGCCTAGATGACCCTGAAAAAGATGCTATTCTCAAATGGGAATCTTTCAAACCAAGTGCTATAACTATCCCTCGTAAAGCCTTTATCATTGCTATCATCAATGGCCAAAGCCATGAGATACTAATAGATTTAAGGTTGAGGATCATTGTCTCTGACAATGTTTACAAAGGGAATGGTTTCCCCACACTATCTGTTGATGAACAAACCATTGCAATAGAACTTCCAAAGAAATATTCTCCTTTTATTGCCTCAGTGAAAAAGAGAGGCTTGAATCTCTCTGAGATTGTTTGTTCTACATTCTCCATGGGATGGTTTGGAGAAAAAGAGAGTAGAAGGACTGTGAGGATTGACTGCTTTTTGCATGAAAACAGTGTGAATATATATGTGAGGCCTATTACTGGATTAACAATTGTAGTTGATCTTGGTCTTATGAAAATTGTGGAGTATCATGACAGGGAAATTGAAACTGTGCCTACTGCTGAGAACACTGAATATCAGGTTTCAAAACAAAGCCCACCATTTGGACCAAAACAGCATAGTCTTGCTAGTCATCAACCACAAGGTCCTGGCTTCCAGATCAATGGCCACAGTGTTAGTTGGGCCAATTGGAAGTTTCACATAGGATTTGATGTACGAGCTGGTGTTATAATATCATTGGCTTCAACCTACGATCTAGAGAAGCACAAATCTCGTAGATCAACGGTGTCTTTGATACCTAATCGTGATTGTCCGCCAAATGCCGAGTTCATTGATACATACACACACTCAGCAGAGGGTGCACCAATCCTCTTGAAGAATGCTGTCTGTGTTTTTGAACAATATAATAGTATCATGTGGCGTCACACTGAAACGGGCATTCCTAATGAATTCATCGAAGAATCAAGAACCGAAGTAAACTTGATAGTGAGGAGTGTAGTTACTGTGGGCAACTATGATAACATTATAGATTGGGAGTTCAAAGCAAGTGGTTCCATCAAGCCGTCGATAGCATTATCAGGTATACTTGAAATTAAGGCAACAAACATTAAGCATAAGGATGAGATTAAGGAAGATTTACATGGTACATTGGTGTCAGAAAACAGCATTGGAGTTTACCATGACCATTTCTACATCTACTACCTTGATCTTGATATTGATGGTACACACAACTCATTTGAGAAAACAAGTTTAAAGACAATAAGAATCACTGATGGAAGTTCAAAGAGAAAGAGTTATTGGACCACTGAGACTCAAACTGCTAAGACAGAATCAGATGCAAAAATCACAATTTGGGCTAGCCCCAGAACTGAAAAATGGGCTGGTGGACTATATGTTGATCATAGCCATGGAGAAGACACATTAGCTGTTTGGACCAAAAAGAATAGAGACATTGTGAACAAGGACATTGTGATGTGGCATGTAGTTGGAATTCATCATGTTCCAGCACAGGAAGATTTCCCAACAATGCCACTATTGAGCACTGGATTTGAGTTGAGGCCAACAAATTTCTTTGAGAGGAATCCTGTTCTTAAAACACTTTCTCCAAGAGATGTTAAATGGCCTGGTTGCCCCAAGTAA

Protein sequence

>Msa1216600

HHLQLPFHTTNTSYRAQASSQWLPPPLSFAALTLLSLQAVVSVTPLHFQHPLDPLTDKEYSLVQKIVLHKYPKVAFHYIGLDDPEKDAILKWESFKPSAITIPRKAFIIAIINGQSHEILIDLRLRIIVSDNVYKGNGFPTLSVDEQTIAIELPKKYSPFIASVKKRGLNLSEIVCSTFSMGWFGEKESRRTVRIDCFLHENSVNIYVRPITGLTIVVDLGLMKIVEYHDREIETVPTAENTEYQVSKQSPPFGPKQHSLASHQPQGPGFQINGHSVSWANWKFHIGFDVRAGVIISLASTYDLEKHKSRRSTVSLIPNRDCPPNAEFIDTYTHSAEGAPILLKNAVCVFEQYNSIMWRHTETGIPNEFIEESRTEVNLIVRSVVTVGNYDNIIDWEFKASGSIKPSIALSGILEIKATNIKHKDEIKEDLHGTLVSENSIGVYHDHFYIYYLDLDIDGTHNSFEKTSLKTIRITDGSSKRKSYWTTETQTAKTESDAKITIWASPRTEKWAGGLYVDHSHGEDTLAVWTKKNRDIVNKDIVMWHVVGIHHVPAQEDFPTMPLLSTGFELRPTNFFERNPVLKTLSPRDVKWPGCPK*