Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1420020 | sp|G7IHF9|CASP4_MEDTR | 96.818 | 220 | 7 | 0 | 1 | 220 | 1 | 220 | 2.29e-156 | 434 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1420020 | A0A396JB04 | 96.818 | 220 | 7 | 0 | 1 | 220 | 1 | 220 | 8.74e-154 | 434 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004580 | Msa1420020 | 0.847119 | 1.414447e-59 | -8.615850e-47 |
| Msa0010150 | Msa1420020 | 0.800535 | 1.376778e-48 | -8.615850e-47 |
| Msa0012820 | Msa1420020 | 0.808721 | 2.694127e-50 | -8.615850e-47 |
| Msa0024280 | Msa1420020 | 0.833022 | 6.771268e-56 | -8.615850e-47 |
| Msa0024290 | Msa1420020 | 0.819191 | 1.321750e-52 | -8.615850e-47 |
| Msa0036230 | Msa1420020 | 0.805984 | 1.025051e-49 | -8.615850e-47 |
| Msa0036580 | Msa1420020 | 0.811073 | 8.400041e-51 | -8.615850e-47 |
| Msa0037500 | Msa1420020 | 0.806031 | 1.002076e-49 | -8.615850e-47 |
| Msa0048950 | Msa1420020 | 0.876732 | 1.104916e-68 | -8.615850e-47 |
| Msa0057870 | Msa1420020 | 0.821607 | 3.689515e-53 | -8.615850e-47 |
| Msa0059880 | Msa1420020 | 0.874413 | 6.888194e-68 | -8.615850e-47 |
| Msa0061600 | Msa1420020 | 0.807364 | 5.241567e-50 | -8.615850e-47 |
| Msa0069480 | Msa1420020 | 0.811333 | 7.377139e-51 | -8.615850e-47 |
| Msa0072030 | Msa1420020 | 0.836858 | 7.312763e-57 | -8.615850e-47 |
| Msa0074620 | Msa1420020 | 0.820936 | 5.270706e-53 | -8.615850e-47 |
| Msa0084150 | Msa1420020 | 0.819733 | 9.945653e-53 | -8.615850e-47 |
| Msa0084160 | Msa1420020 | 0.818223 | 2.193062e-52 | -8.615850e-47 |
| Msa0101650 | Msa1420020 | -0.806653 | 7.409368e-50 | -8.615850e-47 |
| Msa0102930 | Msa1420020 | 0.837669 | 4.533859e-57 | -8.615850e-47 |
| Msa0104360 | Msa1420020 | -0.808862 | 2.513840e-50 | -8.615850e-47 |
| Msa0104390 | Msa1420020 | -0.814663 | 1.373820e-51 | -8.615850e-47 |
| Msa0106130 | Msa1420020 | 0.808400 | 3.154897e-50 | -8.615850e-47 |
| Msa0120050 | Msa1420020 | 0.822040 | 2.930368e-53 | -8.615850e-47 |
| Msa0120070 | Msa1420020 | 0.830853 | 2.323724e-55 | -8.615850e-47 |
| Msa1357490 | Msa1420020 | 0.857862 | 1.222091e-62 | -8.615850e-47 |
| Msa1365850 | Msa1420020 | 0.816164 | 6.367657e-52 | -8.615850e-47 |
| Msa1370930 | Msa1420020 | 0.810302 | 1.233231e-50 | -8.615850e-47 |
| Msa1373560 | Msa1420020 | 0.823968 | 1.040524e-53 | -8.615850e-47 |
| Msa1376070 | Msa1420020 | 0.833647 | 4.730101e-56 | -8.615850e-47 |
| Msa1377520 | Msa1420020 | 0.831765 | 1.386799e-55 | -8.615850e-47 |
| Msa1378400 | Msa1420020 | 0.824172 | 9.322940e-54 | -8.615850e-47 |
| Msa1380490 | Msa1420020 | 0.836822 | 7.470493e-57 | -8.615850e-47 |
| Msa1386020 | Msa1420020 | -0.801042 | 1.085028e-48 | -8.615850e-47 |
| Msa1386120 | Msa1420020 | 0.802242 | 6.155693e-49 | -8.615850e-47 |
| Msa1386260 | Msa1420020 | 0.821026 | 5.024785e-53 | -8.615850e-47 |
| Msa1393440 | Msa1420020 | 0.825374 | 4.852947e-54 | -8.615850e-47 |
| Msa1407670 | Msa1420020 | 0.847487 | 1.120964e-59 | -8.615850e-47 |
| Msa1409060 | Msa1420020 | 0.805171 | 1.518599e-49 | -8.615850e-47 |
| Msa1411550 | Msa1420020 | 0.814258 | 1.688184e-51 | -8.615850e-47 |
| Msa1413090 | Msa1420020 | 0.819732 | 9.951649e-53 | -8.615850e-47 |
| Msa1420020 | Msa1421120 | 0.844240 | 8.545701e-59 | -8.615850e-47 |
| Msa1420020 | Msa1421130 | 0.817765 | 2.782692e-52 | -8.615850e-47 |
| Msa1420020 | Msa1426420 | 0.817880 | 2.621524e-52 | -8.615850e-47 |
| Msa1420020 | Msa1427670 | 0.802119 | 6.526388e-49 | -8.615850e-47 |
| Msa1420020 | Msa1443550 | -0.805275 | 1.443818e-49 | -8.615850e-47 |
| Msa1420020 | Msa1445900 | 0.835373 | 1.742971e-56 | -8.615850e-47 |
| Msa1420020 | Msa1447790 | 0.814413 | 1.560451e-51 | -8.615850e-47 |
| Msa1420020 | Msa1449770 | 0.850347 | 1.801252e-60 | -8.615850e-47 |
| Msa1420020 | Msa1452200 | -0.807732 | 4.377376e-50 | -8.615850e-47 |
| Msa1420020 | Msa1459610 | 0.860813 | 1.589752e-63 | -8.615850e-47 |
| Msa1420020 | Msa1460310 | 0.815603 | 8.494473e-52 | -8.615850e-47 |
| Msa0603950 | Msa1420020 | 0.854065 | 1.577534e-61 | -8.615850e-47 |
| Msa0605410 | Msa1420020 | 0.809450 | 1.881118e-50 | -8.615850e-47 |
| Msa0605460 | Msa1420020 | 0.822745 | 2.010273e-53 | -8.615850e-47 |
| Msa0605470 | Msa1420020 | 0.863978 | 1.692232e-64 | -8.615850e-47 |
| Msa0623980 | Msa1420020 | 0.812051 | 5.149667e-51 | -8.615850e-47 |
| Msa0624050 | Msa1420020 | 0.808226 | 3.437314e-50 | -8.615850e-47 |
| Msa0631700 | Msa1420020 | 0.834175 | 3.489929e-56 | -8.615850e-47 |
| Msa0640290 | Msa1420020 | 0.825284 | 5.096570e-54 | -8.615850e-47 |
| Msa0643020 | Msa1420020 | 0.821085 | 4.870537e-53 | -8.615850e-47 |
| Msa0643840 | Msa1420020 | 0.813882 | 2.044275e-51 | -8.615850e-47 |
| Msa0646040 | Msa1420020 | 0.810973 | 8.830826e-51 | -8.615850e-47 |
| Msa0646210 | Msa1420020 | 0.807859 | 4.113402e-50 | -8.615850e-47 |
| Msa0650310 | Msa1420020 | 0.809370 | 1.956397e-50 | -8.615850e-47 |
| Msa0651090 | Msa1420020 | 0.802820 | 4.679167e-49 | -8.615850e-47 |
| Msa0657860 | Msa1420020 | -0.806624 | 7.516678e-50 | -8.615850e-47 |
| Msa0668210 | Msa1420020 | 0.800098 | 1.689763e-48 | -8.615850e-47 |
| Msa0668220 | Msa1420020 | 0.806427 | 8.269086e-50 | -8.615850e-47 |
| Msa0670360 | Msa1420020 | 0.833755 | 4.443261e-56 | -8.615850e-47 |
| Msa0676140 | Msa1420020 | 0.816587 | 5.120847e-52 | -8.615850e-47 |
| Msa0676190 | Msa1420020 | 0.836303 | 1.012537e-56 | -8.615850e-47 |
| Msa0678620 | Msa1420020 | 0.852067 | 5.884710e-61 | -8.615850e-47 |
| Msa0679780 | Msa1420020 | -0.802303 | 5.980425e-49 | -8.615850e-47 |
| Msa0682730 | Msa1420020 | 0.833838 | 4.236038e-56 | -8.615850e-47 |
| Msa0684720 | Msa1420020 | 0.858662 | 7.063568e-63 | -8.615850e-47 |
| Msa0702200 | Msa1420020 | -0.802649 | 5.074705e-49 | -8.615850e-47 |
| Msa0711240 | Msa1420020 | 0.815285 | 9.996058e-52 | -8.615850e-47 |
| Msa0727480 | Msa1420020 | 0.842069 | 3.239151e-58 | -8.615850e-47 |
| Msa0735280 | Msa1420020 | 0.861121 | 1.281898e-63 | -8.615850e-47 |
| Msa0746090 | Msa1420020 | 0.800707 | 1.270242e-48 | -8.615850e-47 |
| Msa0768670 | Msa1420020 | 0.835658 | 1.475933e-56 | -8.615850e-47 |
| Msa0768720 | Msa1420020 | 0.832320 | 1.010963e-55 | -8.615850e-47 |
| Msa0777250 | Msa1420020 | 0.856730 | 2.640345e-62 | -8.615850e-47 |
| Msa0791300 | Msa1420020 | 0.843367 | 1.463642e-58 | -8.615850e-47 |
| Msa0796430 | Msa1420020 | 0.814660 | 1.376068e-51 | -8.615850e-47 |
| Msa0814160 | Msa1420020 | 0.802278 | 6.052860e-49 | -8.615850e-47 |
| Msa0814230 | Msa1420020 | 0.836240 | 1.051004e-56 | -8.615850e-47 |
| Msa0824860 | Msa1420020 | 0.805605 | 1.231246e-49 | -8.615850e-47 |
| Msa0834270 | Msa1420020 | 0.822334 | 2.504657e-53 | -8.615850e-47 |
| Msa0131460 | Msa1420020 | 0.811251 | 7.686802e-51 | -8.615850e-47 |
| Msa0139270 | Msa1420020 | 0.805363 | 1.383755e-49 | -8.615850e-47 |
| Msa0139720 | Msa1420020 | 0.819290 | 1.255003e-52 | -8.615850e-47 |
| Msa0140270 | Msa1420020 | 0.809936 | 1.478872e-50 | -8.615850e-47 |
| Msa0143680 | Msa1420020 | 0.811355 | 7.295828e-51 | -8.615850e-47 |
| Msa0143710 | Msa1420020 | 0.827582 | 1.444673e-54 | -8.615850e-47 |
| Msa0143740 | Msa1420020 | 0.816822 | 4.535083e-52 | -8.615850e-47 |
| Msa0143770 | Msa1420020 | 0.823489 | 1.347670e-53 | -8.615850e-47 |
| Msa0147670 | Msa1420020 | 0.859149 | 5.050813e-63 | -8.615850e-47 |
| Msa0147680 | Msa1420020 | 0.804157 | 2.471971e-49 | -8.615850e-47 |
| Msa0150910 | Msa1420020 | 0.852641 | 4.040851e-61 | -8.615850e-47 |
| Msa0154240 | Msa1420020 | -0.801801 | 7.586695e-49 | -8.615850e-47 |
| Msa0163340 | Msa1420020 | 0.851277 | 9.858233e-61 | -8.615850e-47 |
| Msa0163370 | Msa1420020 | 0.832860 | 7.428403e-56 | -8.615850e-47 |
| Msa0170990 | Msa1420020 | 0.827918 | 1.199401e-54 | -8.615850e-47 |
| Msa0174600 | Msa1420020 | 0.805009 | 1.641827e-49 | -8.615850e-47 |
| Msa0176620 | Msa1420020 | 0.800513 | 1.391672e-48 | -8.615850e-47 |
| Msa0197750 | Msa1420020 | 0.845035 | 5.220076e-59 | -8.615850e-47 |
| Msa0212490 | Msa1420020 | 0.815930 | 7.182721e-52 | -8.615850e-47 |
| Msa0212550 | Msa1420020 | 0.807902 | 4.028090e-50 | -8.615850e-47 |
| Msa0219210 | Msa1420020 | 0.972877 | 1.732207e-135 | -8.615850e-47 |
| Msa0223880 | Msa1420020 | 0.803471 | 3.432046e-49 | -8.615850e-47 |
| Msa0232860 | Msa1420020 | -0.801539 | 8.584846e-49 | -8.615850e-47 |
| Msa1233650 | Msa1420020 | 0.823279 | 1.508603e-53 | -8.615850e-47 |
| Msa1237260 | Msa1420020 | -0.819123 | 1.370135e-52 | -8.615850e-47 |
| Msa1253270 | Msa1420020 | 0.805982 | 1.026152e-49 | -8.615850e-47 |
| Msa1269050 | Msa1420020 | 0.853526 | 2.254143e-61 | -8.615850e-47 |
| Msa1286420 | Msa1420020 | 0.820405 | 6.979688e-53 | -8.615850e-47 |
| Msa1288970 | Msa1420020 | -0.810358 | 1.199185e-50 | -8.615850e-47 |
| Msa1296870 | Msa1420020 | 0.818636 | 1.767503e-52 | -8.615850e-47 |
| Msa1300610 | Msa1420020 | 0.824186 | 9.251362e-54 | -8.615850e-47 |
| Msa1314040 | Msa1420020 | 0.810592 | 1.067794e-50 | -8.615850e-47 |
| Msa1314710 | Msa1420020 | 0.835217 | 1.908112e-56 | -8.615850e-47 |
| Msa1317710 | Msa1420020 | -0.802840 | 4.635646e-49 | -8.615850e-47 |
| Msa1319290 | Msa1420020 | 0.819960 | 8.824548e-53 | -8.615850e-47 |
| Msa1323030 | Msa1420020 | 0.850233 | 1.938780e-60 | -8.615850e-47 |
| Msa1323120 | Msa1420020 | 0.841474 | 4.649317e-58 | -8.615850e-47 |
| Msa1323160 | Msa1420020 | 0.846507 | 2.079320e-59 | -8.615850e-47 |
| Msa1329740 | Msa1420020 | 0.832565 | 8.794051e-56 | -8.615850e-47 |
| Msa0366510 | Msa1420020 | 0.805866 | 1.085469e-49 | -8.615850e-47 |
| Msa0389050 | Msa1420020 | -0.806699 | 7.245793e-50 | -8.615850e-47 |
| Msa0389060 | Msa1420020 | -0.807707 | 4.431749e-50 | -8.615850e-47 |
| Msa0423680 | Msa1420020 | 0.800400 | 1.466814e-48 | -8.615850e-47 |
| Msa0444200 | Msa1420020 | 0.825793 | 3.860770e-54 | -8.615850e-47 |
| Msa0469550 | Msa1420020 | 0.848301 | 6.687210e-60 | -8.615850e-47 |
| Msa0985700 | Msa1420020 | 0.857114 | 2.034122e-62 | -8.615850e-47 |
| Msa0987640 | Msa1420020 | 0.820645 | 6.147447e-53 | -8.615850e-47 |
| Msa0993450 | Msa1420020 | 0.834162 | 3.514569e-56 | -8.615850e-47 |
| Msa1003110 | Msa1420020 | 0.820239 | 7.620416e-53 | -8.615850e-47 |
| Msa1006940 | Msa1420020 | 0.804248 | 2.365907e-49 | -8.615850e-47 |
| Msa1020540 | Msa1420020 | 0.805362 | 1.384419e-49 | -8.615850e-47 |
| Msa1021620 | Msa1420020 | 0.839580 | 1.455418e-57 | -8.615850e-47 |
| Msa1022580 | Msa1420020 | 0.807858 | 4.116650e-50 | -8.615850e-47 |
| Msa1024350 | Msa1420020 | 0.819092 | 1.392500e-52 | -8.615850e-47 |
| Msa1026050 | Msa1420020 | 0.826016 | 3.419250e-54 | -8.615850e-47 |
| Msa1036020 | Msa1420020 | 0.801121 | 1.045556e-48 | -8.615850e-47 |
| Msa1046220 | Msa1420020 | 0.801435 | 9.016628e-49 | -8.615850e-47 |
| Msa1053690 | Msa1420020 | -0.821432 | 4.051095e-53 | -8.615850e-47 |
| Msa1061670 | Msa1420020 | 0.844513 | 7.217616e-59 | -8.615850e-47 |
| Msa1076520 | Msa1420020 | -0.802401 | 5.709788e-49 | -8.615850e-47 |
| Msa1076830 | Msa1420020 | 0.832577 | 8.732881e-56 | -8.615850e-47 |
| Msa1079610 | Msa1420020 | -0.804217 | 2.401912e-49 | -8.615850e-47 |
| Msa1081610 | Msa1420020 | 0.801651 | 8.143382e-49 | -8.615850e-47 |
| Msa1087380 | Msa1420020 | 0.809616 | 1.733028e-50 | -8.615850e-47 |
| Msa1091230 | Msa1420020 | -0.801675 | 8.051382e-49 | -8.615850e-47 |
| Msa1104960 | Msa1420020 | 0.826986 | 2.006731e-54 | -8.615850e-47 |
| Msa1106960 | Msa1420020 | 0.837612 | 4.689909e-57 | -8.615850e-47 |
| Msa0252880 | Msa1420020 | 0.808091 | 3.671732e-50 | -8.615850e-47 |
| Msa0252930 | Msa1420020 | 0.806857 | 6.710709e-50 | -8.615850e-47 |
| Msa0259300 | Msa1420020 | 0.820157 | 7.954358e-53 | -8.615850e-47 |
| Msa0264940 | Msa1420020 | 0.814490 | 1.500103e-51 | -8.615850e-47 |
| Msa0272420 | Msa1420020 | -0.801370 | 9.298872e-49 | -8.615850e-47 |
| Msa0274250 | Msa1420020 | 0.803297 | 3.729234e-49 | -8.615850e-47 |
| Msa0274260 | Msa1420020 | 0.812376 | 4.373089e-51 | -8.615850e-47 |
| Msa0277280 | Msa1420020 | 0.836361 | 9.787162e-57 | -8.615850e-47 |
| Msa0291750 | Msa1420020 | 0.817757 | 2.794293e-52 | -8.615850e-47 |
| Msa0298270 | Msa1420020 | 0.918147 | 2.230691e-86 | -8.615850e-47 |
| Msa0302990 | Msa1420020 | 0.816505 | 5.341166e-52 | -8.615850e-47 |
| Msa0329650 | Msa1420020 | 0.801867 | 7.352798e-49 | -8.615850e-47 |
| Msa0336070 | Msa1420020 | 0.840603 | 7.874297e-58 | -8.615850e-47 |
| Msa0336630 | Msa1420020 | 0.865916 | 4.171731e-65 | -8.615850e-47 |
| Msa0340650 | Msa1420020 | 0.804345 | 2.258304e-49 | -8.615850e-47 |
| Msa0343720 | Msa1420020 | 0.803046 | 4.202269e-49 | -8.615850e-47 |
| Msa1109880 | Msa1420020 | 0.839536 | 1.494278e-57 | -8.615850e-47 |
| Msa1109890 | Msa1420020 | 0.869386 | 3.218957e-66 | -8.615850e-47 |
| Msa1112730 | Msa1420020 | 0.815329 | 9.775845e-52 | -8.615850e-47 |
| Msa1132560 | Msa1420020 | 0.820762 | 5.778777e-53 | -8.615850e-47 |
| Msa1133860 | Msa1420020 | 0.815640 | 8.333361e-52 | -8.615850e-47 |
| Msa1149020 | Msa1420020 | 0.819897 | 9.125040e-53 | -8.615850e-47 |
| Msa1155630 | Msa1420020 | 0.801792 | 7.619079e-49 | -8.615850e-47 |
| Msa1163670 | Msa1420020 | 0.803965 | 2.709580e-49 | -8.615850e-47 |
| Msa1182800 | Msa1420020 | -0.819559 | 1.089715e-52 | -8.615850e-47 |
| Msa1182830 | Msa1420020 | -0.808430 | 3.108718e-50 | -8.615850e-47 |
| Msa1207480 | Msa1420020 | 0.811500 | 6.786681e-51 | -8.615850e-47 |
| Msa1211370 | Msa1420020 | -0.800538 | 1.374982e-48 | -8.615850e-47 |
| Msa1211390 | Msa1420020 | -0.814110 | 1.819983e-51 | -8.615850e-47 |
| Msa1214960 | Msa1420020 | 0.833381 | 5.509155e-56 | -8.615850e-47 |
| Msa1216600 | Msa1420020 | 0.834593 | 2.740390e-56 | -8.615850e-47 |
| Msa0491760 | Msa1420020 | 0.844375 | 7.862861e-59 | -8.615850e-47 |
| Msa0491770 | Msa1420020 | 0.812928 | 3.311278e-51 | -8.615850e-47 |
| Msa0515260 | Msa1420020 | 0.844653 | 6.618261e-59 | -8.615850e-47 |
| Msa0531030 | Msa1420020 | 0.808810 | 2.579006e-50 | -8.615850e-47 |
| Msa0531080 | Msa1420020 | 0.812210 | 4.755224e-51 | -8.615850e-47 |
| Msa0533520 | Msa1420020 | 0.801105 | 1.053511e-48 | -8.615850e-47 |
| Msa0535570 | Msa1420020 | 0.827029 | 1.960687e-54 | -8.615850e-47 |
| Msa0538450 | Msa1420020 | 0.812610 | 3.888016e-51 | -8.615850e-47 |
| Msa0538520 | Msa1420020 | 0.801548 | 8.546753e-49 | -8.615850e-47 |
| Msa0543740 | Msa1420020 | 0.826207 | 3.078487e-54 | -8.615850e-47 |
| Msa0545230 | Msa1420020 | -0.802584 | 5.235521e-49 | -8.615850e-47 |
| Msa0548820 | Msa1420020 | 0.804848 | 1.774190e-49 | -8.615850e-47 |
| Msa0548970 | Msa1420020 | 0.833221 | 6.040796e-56 | -8.615850e-47 |
| Msa0554660 | Msa1420020 | 0.810642 | 1.041533e-50 | -8.615850e-47 |
| Msa0566010 | Msa1420020 | -0.802611 | 5.166989e-49 | -8.615850e-47 |
| Msa0579530 | Msa1420020 | 0.803903 | 2.792003e-49 | -8.615850e-47 |
| Msa0587920 | Msa1420020 | 0.820184 | 7.842663e-53 | -8.615850e-47 |
| Msa0589730 | Msa1420020 | 0.801764 | 7.720029e-49 | -8.615850e-47 |
| Msa0591490 | Msa1420020 | 0.803261 | 3.793344e-49 | -8.615850e-47 |
| Msa0594320 | Msa1420020 | 0.810459 | 1.140760e-50 | -8.615850e-47 |
| Msa0599600 | Msa1420020 | 0.849993 | 2.262791e-60 | -8.615850e-47 |
| Msa0601920 | Msa1420020 | 0.822876 | 1.872956e-53 | -8.615850e-47 |
| Msa0854840 | Msa1420020 | 0.821503 | 3.899507e-53 | -8.615850e-47 |
| Msa0863840 | Msa1420020 | 0.804799 | 1.816603e-49 | -8.615850e-47 |
| Msa0883640 | Msa1420020 | 0.855977 | 4.390821e-62 | -8.615850e-47 |
| Msa0893840 | Msa1420020 | 0.828601 | 8.212059e-55 | -8.615850e-47 |
| Msa0896920 | Msa1420020 | 0.819116 | 1.374782e-52 | -8.615850e-47 |
| Msa0902340 | Msa1420020 | 0.842628 | 2.302772e-58 | -8.615850e-47 |
| Msa0904630 | Msa1420020 | -0.811448 | 6.965723e-51 | -8.615850e-47 |
| Msa0910830 | Msa1420020 | 0.866014 | 3.885892e-65 | -8.615850e-47 |
| Msa0913550 | Msa1420020 | 0.832307 | 1.018779e-55 | -8.615850e-47 |
| Msa0941120 | Msa1420020 | 0.827872 | 1.230952e-54 | -8.615850e-47 |
| Msa0951150 | Msa1420020 | 0.819588 | 1.073606e-52 | -8.615850e-47 |
| Msa0960090 | Msa1420020 | 0.857775 | 1.296935e-62 | -8.615850e-47 |
| Msa0967820 | Msa1420020 | 0.802351 | 5.847022e-49 | -8.615850e-47 |
| Msa0973890 | Msa1420020 | -0.809203 | 2.125131e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1420020 | MtrunA17_Chr2g0321671 | 96.818 | 220 | 7 | 0 | 1 | 220 | 1 | 220 | 1.68e-157 | 434 |
| Msa1420020 | MtrunA17_Chr1g0178161 | 59.064 | 171 | 70 | 0 | 49 | 219 | 25 | 195 | 3.24e-61 | 190 |
| Msa1420020 | MtrunA17_Chr1g0178181 | 59.538 | 173 | 70 | 0 | 47 | 219 | 22 | 194 | 1.60e-57 | 180 |
| Msa1420020 | MtrunA17_Chr1g0178191 | 56.725 | 171 | 74 | 0 | 49 | 219 | 23 | 193 | 2.58e-55 | 175 |
| Msa1420020 | MtrunA17_Chr7g0217691 | 48.276 | 174 | 90 | 0 | 46 | 219 | 12 | 185 | 1.11e-50 | 162 |
| Msa1420020 | MtrunA17_Chr4g0042551 | 43.243 | 185 | 99 | 1 | 42 | 220 | 33 | 217 | 9.46e-47 | 154 |
| Msa1420020 | MtrunA17_Chr5g0417761 | 43.590 | 195 | 100 | 1 | 26 | 220 | 2 | 186 | 3.23e-42 | 141 |
| Msa1420020 | MtrunA17_Chr7g0251531 | 33.094 | 139 | 90 | 2 | 65 | 202 | 33 | 169 | 2.95e-16 | 73.9 |
| Msa1420020 | MtrunA17_Chr4g0021111 | 34.899 | 149 | 84 | 4 | 55 | 201 | 1 | 138 | 4.77e-16 | 72.8 |
| Msa1420020 | MtrunA17_Chr7g0268681 | 28.877 | 187 | 115 | 5 | 24 | 206 | 3 | 175 | 3.41e-15 | 71.2 |
| Msa1420020 | MtrunA17_Chr3g0109681 | 28.141 | 199 | 103 | 5 | 40 | 216 | 7 | 187 | 2.60e-14 | 69.3 |
| Msa1420020 | MtrunA17_Chr2g0303151 | 29.565 | 115 | 81 | 0 | 99 | 213 | 71 | 185 | 3.78e-12 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1420020 | AT2G27370.1 | 49.091 | 220 | 103 | 4 | 3 | 220 | 8 | 220 | 3.69e-64 | 198 |
| Msa1420020 | AT2G36100.1 | 54.762 | 168 | 76 | 0 | 52 | 219 | 38 | 205 | 9.78e-59 | 184 |
| Msa1420020 | AT5G06200.1 | 60.479 | 167 | 66 | 0 | 53 | 219 | 35 | 201 | 4.06e-54 | 172 |
| Msa1420020 | AT5G15290.1 | 49.686 | 159 | 79 | 1 | 43 | 200 | 8 | 166 | 1.58e-51 | 165 |
| Msa1420020 | AT3G11550.1 | 59.880 | 167 | 67 | 0 | 53 | 219 | 37 | 203 | 7.10e-50 | 161 |
| Msa1420020 | AT1G14160.1 | 43.030 | 165 | 94 | 0 | 55 | 219 | 44 | 208 | 2.84e-42 | 142 |
| Msa1420020 | AT1G17200.1 | 29.193 | 161 | 105 | 3 | 58 | 217 | 29 | 181 | 2.83e-15 | 72.0 |
| Msa1420020 | AT3G06390.1 | 28.161 | 174 | 104 | 4 | 24 | 190 | 11 | 170 | 3.35e-15 | 71.6 |
| Msa1420020 | AT5G44550.1 | 30.247 | 162 | 101 | 4 | 66 | 219 | 22 | 179 | 6.08e-12 | 62.8 |
| Msa1420020 | AT1G03700.1 | 32.000 | 150 | 80 | 5 | 65 | 206 | 12 | 147 | 3.01e-11 | 60.1 |
| Msa1420020 | AT4G15610.1 | 27.545 | 167 | 117 | 2 | 40 | 202 | 7 | 173 | 5.45e-11 | 60.1 |
Find 48 sgRNAs with CRISPR-Local
Find 178 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTTGTTCTCTTGGATTCT+AGG | 0.131201 | tig0024736:+37390 | None:intergenic |
| TCTTGGTGCTTCTGTCATTA+TGG | 0.177988 | tig0024736:-37213 | Msa1420020:CDS |
| TACCTAATTGCAGGTATTAA+TGG | 0.240857 | tig0024736:-36306 | Msa1420020:intron |
| TCCATTGCTTCTTGTTCTCT+TGG | 0.247900 | tig0024736:+37382 | None:intergenic |
| CTTGGTGCTTCTGTCATTAT+GGG | 0.276810 | tig0024736:-37212 | Msa1420020:CDS |
| AAATCTACTCCAATCCAAAA+AGG | 0.350579 | tig0024736:-37299 | Msa1420020:CDS |
| TCCTTCAGTTTCATGCTCAA+TGG | 0.391797 | tig0024736:-37154 | Msa1420020:CDS |
| CCTTCAGTTTCATGCTCAAT+GGG | 0.394063 | tig0024736:-37153 | Msa1420020:CDS |
| GGTGCCATTGGTGCTACTCT+TGG | 0.400369 | tig0024736:-37230 | Msa1420020:CDS |
| TGTTCTCTTGGATTCTAGGA+TGG | 0.406134 | tig0024736:+37394 | None:intergenic |
| GCAGGTATTAATGGCCTTAG+TGG | 0.406928 | tig0024736:-36297 | Msa1420020:intron |
| ACATGAACTTACTTAAACAT+TGG | 0.425523 | tig0024736:+37122 | None:intergenic |
| AGAACAAGAAGCAATGGAAA+AGG | 0.427010 | tig0024736:-37377 | Msa1420020:CDS |
| ACACCACAACCAAACAAGAT+AGG | 0.440488 | tig0024736:+36126 | None:intergenic |
| ATGGGAGTCAAGATGCAAAC+TGG | 0.445257 | tig0024736:-36229 | Msa1420020:CDS |
| GTTCTCTTGGATTCTAGGAT+GGG | 0.446748 | tig0024736:+37395 | None:intergenic |
| CTAAACATGCAGGTTCTTTG+TGG | 0.448810 | tig0024736:-36550 | Msa1420020:intron |
| GAACAAGAAGCAATGGAAAA+GGG | 0.449907 | tig0024736:-37376 | Msa1420020:CDS |
| ATTGTTAGACCCCTTGCAGC+TGG | 0.465698 | tig0024736:-36468 | Msa1420020:CDS |
| GGAAAAGGGAAATCCATTGA+TGG | 0.488181 | tig0024736:-37362 | Msa1420020:CDS |
| TTTCCTATCTTGTTTGGTTG+TGG | 0.489463 | tig0024736:-36129 | Msa1420020:CDS |
| CCAAGGTTCAAGTTTGGCTG+TGG | 0.491266 | tig0024736:-36174 | Msa1420020:CDS |
| GTGGCAAATGGAGCAGCAGC+TGG | 0.512854 | tig0024736:-36528 | Msa1420020:CDS |
| TTGTGTACTTAGCACACAAT+GGG | 0.520027 | tig0024736:-36247 | Msa1420020:CDS |
| TGTCTTCTGTAGCTCTCAAA+AGG | 0.525875 | tig0024736:-36106 | Msa1420020:CDS |
| AGGTTCTTTGTGGTGGCAAA+TGG | 0.527477 | tig0024736:-36540 | Msa1420020:CDS |
| GACCCCTTGCAGCTGGTCCA+CGG | 0.529518 | tig0024736:-36461 | Msa1420020:CDS |
| TCCAAGAGAACAAGAAGCAA+TGG | 0.530743 | tig0024736:-37383 | Msa1420020:CDS |
| CCACAGCCAAACTTGAACCT+TGG | 0.532217 | tig0024736:+36174 | None:intergenic |
| AGGAGAATGATCTCCATCAA+TGG | 0.544643 | tig0024736:+37349 | None:intergenic |
| TGAAGCAGCTGCAACCACTA+AGG | 0.546688 | tig0024736:+36283 | None:intergenic |
| TGAAGGAACTGAGTAAAGAA+AGG | 0.555422 | tig0024736:+37170 | None:intergenic |
| AATCCGTGGACCAGCTGCAA+GGG | 0.560165 | tig0024736:+36458 | None:intergenic |
| AACATGCAGGTTCTTTGTGG+TGG | 0.566783 | tig0024736:-36547 | Msa1420020:intron |
| GGACTCAAGAAGAGAAGTTG+AGG | 0.570390 | tig0024736:-37432 | Msa1420020:CDS |
| GGTTGTTTCTTTCGTTGCGT+CGG | 0.570523 | tig0024736:-36153 | Msa1420020:CDS |
| TTGGTGCTTCTGTCATTATG+GGG | 0.574068 | tig0024736:-37211 | Msa1420020:CDS |
| GCAGACAATTGAGAATGGTA+AGG | 0.574191 | tig0024736:+36491 | None:intergenic |
| ACAATGCAGACAATTGAGAA+TGG | 0.577153 | tig0024736:+36486 | None:intergenic |
| CCCATTGAGCATGAAACTGA+AGG | 0.601992 | tig0024736:+37153 | None:intergenic |
| GAATCCGTGGACCAGCTGCA+AGG | 0.605753 | tig0024736:+36457 | None:intergenic |
| AGCACCAAGAGTAGCACCAA+TGG | 0.630653 | tig0024736:+37226 | None:intergenic |
| GTTGTGTACTTAGCACACAA+TGG | 0.633961 | tig0024736:-36248 | Msa1420020:CDS |
| ATCCGTGGACCAGCTGCAAG+GGG | 0.635198 | tig0024736:+36459 | None:intergenic |
| CAATTGAGAATGGTAAGGAG+AGG | 0.647713 | tig0024736:+36496 | None:intergenic |
| ACAACAGTTGCAGCATGTGG+AGG | 0.650553 | tig0024736:+37329 | None:intergenic |
| GTAACAACAGTTGCAGCATG+TGG | 0.663640 | tig0024736:+37326 | None:intergenic |
| ACGATGACAAGTAGAATCCG+TGG | 0.676654 | tig0024736:+36444 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTACAATTAATTGTATTTT+TGG | - | tig0024736:36534-36553 | Msa1420020:CDS | 10.0% |
| !!! | TTTACAATTAATTGTATTTT+TGG | - | tig0024736:36534-36553 | Msa1420020:CDS | 10.0% |
| !! | AAACAATAAATTTCAAGAAT+AGG | - | tig0024736:36728-36747 | Msa1420020:intron | 15.0% |
| !! | AAAAAAAAAATGTTCTTAGA+GGG | - | tig0024736:36778-36797 | Msa1420020:intron | 15.0% |
| !!! | TTTAAATATCATCCTTTTTA+TGG | - | tig0024736:36959-36978 | Msa1420020:intron | 15.0% |
| !! | AAACAATAAATTTCAAGAAT+AGG | - | tig0024736:36728-36747 | Msa1420020:intron | 15.0% |
| !! | AAAAAAAAAATGTTCTTAGA+GGG | - | tig0024736:36778-36797 | Msa1420020:intron | 15.0% |
| !!! | TTTAAATATCATCCTTTTTA+TGG | - | tig0024736:36959-36978 | Msa1420020:intron | 15.0% |
| !! | TAGTATTGTAAAGATCAAAT+GGG | + | tig0024736:36454-36473 | None:intergenic | 20.0% |
| !! | ATAGTATTGTAAAGATCAAA+TGG | + | tig0024736:36455-36474 | None:intergenic | 20.0% |
| !! | AATTGTGTTTCAGTTAAAAT+AGG | + | tig0024736:36564-36583 | None:intergenic | 20.0% |
| !!! | AGAAAAAAGTTTTGAAACAA+GGG | + | tig0024736:36621-36640 | None:intergenic | 20.0% |
| !! | GAAAAAAAAAATGTTCTTAG+AGG | - | tig0024736:36777-36796 | Msa1420020:intron | 20.0% |
| !! | TAGTATTGTAAAGATCAAAT+GGG | + | tig0024736:36454-36473 | None:intergenic | 20.0% |
| !! | ATAGTATTGTAAAGATCAAA+TGG | + | tig0024736:36455-36474 | None:intergenic | 20.0% |
| !! | AATTGTGTTTCAGTTAAAAT+AGG | + | tig0024736:36564-36583 | None:intergenic | 20.0% |
| !!! | AGAAAAAAGTTTTGAAACAA+GGG | + | tig0024736:36621-36640 | None:intergenic | 20.0% |
| !! | GAAAAAAAAAATGTTCTTAG+AGG | - | tig0024736:36777-36796 | Msa1420020:intron | 20.0% |
| !! | CAATCTTAGACTTCATTTTA+AGG | - | tig0024736:36278-36297 | Msa1420020:CDS | 25.0% |
| ! | ACATGAACTTACTTAAACAT+TGG | + | tig0024736:36415-36434 | None:intergenic | 25.0% |
| ! | AGTAAGTTCATGTTACATAA+CGG | - | tig0024736:36422-36441 | Msa1420020:intron | 25.0% |
| !!! | AACACTTTTTAAGAATGACT+TGG | - | tig0024736:36503-36522 | Msa1420020:CDS | 25.0% |
| !!! | GAAAAAAGTTTTGAAACAAG+GGG | + | tig0024736:36620-36639 | None:intergenic | 25.0% |
| !!! | GAGAAAAAAGTTTTGAAACA+AGG | + | tig0024736:36622-36641 | None:intergenic | 25.0% |
| !!! | TTTTCTCACAACTTAATTTG+AGG | - | tig0024736:36635-36654 | Msa1420020:intron | 25.0% |
| ! | TTACATCCGATAAATGAAAT+CGG | - | tig0024736:36752-36771 | Msa1420020:intron | 25.0% |
| ! | TTTCTTCCGATTTCATTTAT+CGG | + | tig0024736:36761-36780 | None:intergenic | 25.0% |
| !! | CAATCTTAGACTTCATTTTA+AGG | - | tig0024736:36278-36297 | Msa1420020:CDS | 25.0% |
| ! | ACATGAACTTACTTAAACAT+TGG | + | tig0024736:36415-36434 | None:intergenic | 25.0% |
| ! | AGTAAGTTCATGTTACATAA+CGG | - | tig0024736:36422-36441 | Msa1420020:intron | 25.0% |
| !!! | AACACTTTTTAAGAATGACT+TGG | - | tig0024736:36503-36522 | Msa1420020:CDS | 25.0% |
| !!! | GAAAAAAGTTTTGAAACAAG+GGG | + | tig0024736:36620-36639 | None:intergenic | 25.0% |
| !!! | GAGAAAAAAGTTTTGAAACA+AGG | + | tig0024736:36622-36641 | None:intergenic | 25.0% |
| !!! | TTTTCTCACAACTTAATTTG+AGG | - | tig0024736:36635-36654 | Msa1420020:intron | 25.0% |
| ! | TTACATCCGATAAATGAAAT+CGG | - | tig0024736:36752-36771 | Msa1420020:intron | 25.0% |
| ! | TTTCTTCCGATTTCATTTAT+CGG | + | tig0024736:36761-36780 | None:intergenic | 25.0% |
| AAATCTACTCCAATCCAAAA+AGG | - | tig0024736:36235-36254 | Msa1420020:CDS | 30.0% | |
| CAAAAAGGTGGAATGAAAAA+GGG | - | tig0024736:36250-36269 | Msa1420020:CDS | 30.0% | |
| !!! | TTAGACTTCATTTTAAGGCT+TGG | - | tig0024736:36283-36302 | Msa1420020:CDS | 30.0% |
| TGTGTTTCAGTTAAAATAGG+AGG | + | tig0024736:36561-36580 | None:intergenic | 30.0% | |
| AACATGTCACGTCATAAAAT+AGG | + | tig0024736:36664-36683 | None:intergenic | 30.0% | |
| !! | ACGATATGAGAGTGTTTATT+TGG | + | tig0024736:36810-36829 | None:intergenic | 30.0% |
| !!! | TAAACAATGTTTTGATGACG+TGG | + | tig0024736:36843-36862 | None:intergenic | 30.0% |
| GCATGTTTAGATCCATAAAA+AGG | + | tig0024736:36974-36993 | None:intergenic | 30.0% | |
| ! | TTTTATGGATCTAAACATGC+AGG | - | tig0024736:36974-36993 | Msa1420020:intron | 30.0% |
| TACCTAATTGCAGGTATTAA+TGG | - | tig0024736:37228-37247 | Msa1420020:CDS | 30.0% | |
| AAATCTACTCCAATCCAAAA+AGG | - | tig0024736:36235-36254 | Msa1420020:CDS | 30.0% | |
| CAAAAAGGTGGAATGAAAAA+GGG | - | tig0024736:36250-36269 | Msa1420020:CDS | 30.0% | |
| !!! | TTAGACTTCATTTTAAGGCT+TGG | - | tig0024736:36283-36302 | Msa1420020:CDS | 30.0% |
| TGTGTTTCAGTTAAAATAGG+AGG | + | tig0024736:36561-36580 | None:intergenic | 30.0% | |
| AACATGTCACGTCATAAAAT+AGG | + | tig0024736:36664-36683 | None:intergenic | 30.0% | |
| !! | ACGATATGAGAGTGTTTATT+TGG | + | tig0024736:36810-36829 | None:intergenic | 30.0% |
| !!! | TAAACAATGTTTTGATGACG+TGG | + | tig0024736:36843-36862 | None:intergenic | 30.0% |
| GCATGTTTAGATCCATAAAA+AGG | + | tig0024736:36974-36993 | None:intergenic | 30.0% | |
| ! | TTTTATGGATCTAAACATGC+AGG | - | tig0024736:36974-36993 | Msa1420020:intron | 30.0% |
| TACCTAATTGCAGGTATTAA+TGG | - | tig0024736:37228-37247 | Msa1420020:CDS | 30.0% | |
| TTCTTGTTCTCTTGGATTCT+AGG | + | tig0024736:36147-36166 | None:intergenic | 35.0% | |
| AGAACAAGAAGCAATGGAAA+AGG | - | tig0024736:36157-36176 | Msa1420020:CDS | 35.0% | |
| GAACAAGAAGCAATGGAAAA+GGG | - | tig0024736:36158-36177 | Msa1420020:CDS | 35.0% | |
| ! | TTCATTCCACCTTTTTGGAT+TGG | + | tig0024736:36247-36266 | None:intergenic | 35.0% |
| !! | CCTTTTTCATTCCACCTTTT+TGG | + | tig0024736:36252-36271 | None:intergenic | 35.0% |
| CCAAAAAGGTGGAATGAAAA+AGG | - | tig0024736:36249-36268 | Msa1420020:CDS | 35.0% | |
| TGAAGGAACTGAGTAAAGAA+AGG | + | tig0024736:36367-36386 | None:intergenic | 35.0% | |
| CGAAATTGCAAGGATATGAA+GGG | + | tig0024736:36915-36934 | None:intergenic | 35.0% | |
| ACAATGCAGACAATTGAGAA+TGG | + | tig0024736:37051-37070 | None:intergenic | 35.0% | |
| TTGTGTACTTAGCACACAAT+GGG | - | tig0024736:37287-37306 | Msa1420020:CDS | 35.0% | |
| !! | TTTTTGCCAAGGTTCAAGTT+TGG | - | tig0024736:37354-37373 | Msa1420020:CDS | 35.0% |
| ! | TTTCCTATCTTGTTTGGTTG+TGG | - | tig0024736:37405-37424 | Msa1420020:CDS | 35.0% |
| TTCTTGTTCTCTTGGATTCT+AGG | + | tig0024736:36147-36166 | None:intergenic | 35.0% | |
| AGAACAAGAAGCAATGGAAA+AGG | - | tig0024736:36157-36176 | Msa1420020:CDS | 35.0% | |
| GAACAAGAAGCAATGGAAAA+GGG | - | tig0024736:36158-36177 | Msa1420020:CDS | 35.0% | |
| ! | TTCATTCCACCTTTTTGGAT+TGG | + | tig0024736:36247-36266 | None:intergenic | 35.0% |
| !! | CCTTTTTCATTCCACCTTTT+TGG | + | tig0024736:36252-36271 | None:intergenic | 35.0% |
| CCAAAAAGGTGGAATGAAAA+AGG | - | tig0024736:36249-36268 | Msa1420020:CDS | 35.0% | |
| TGAAGGAACTGAGTAAAGAA+AGG | + | tig0024736:36367-36386 | None:intergenic | 35.0% | |
| CGAAATTGCAAGGATATGAA+GGG | + | tig0024736:36915-36934 | None:intergenic | 35.0% | |
| ACAATGCAGACAATTGAGAA+TGG | + | tig0024736:37051-37070 | None:intergenic | 35.0% | |
| TTGTGTACTTAGCACACAAT+GGG | - | tig0024736:37287-37306 | Msa1420020:CDS | 35.0% | |
| !! | TTTTTGCCAAGGTTCAAGTT+TGG | - | tig0024736:37354-37373 | Msa1420020:CDS | 35.0% |
| ! | TTTCCTATCTTGTTTGGTTG+TGG | - | tig0024736:37405-37424 | Msa1420020:CDS | 35.0% |
| !! | GTTCTCTTGGATTCTAGGAT+GGG | + | tig0024736:36142-36161 | None:intergenic | 40.0% |
| ! | TGTTCTCTTGGATTCTAGGA+TGG | + | tig0024736:36143-36162 | None:intergenic | 40.0% |
| TCCAAGAGAACAAGAAGCAA+TGG | - | tig0024736:36151-36170 | Msa1420020:CDS | 40.0% | |
| TCCATTGCTTCTTGTTCTCT+TGG | + | tig0024736:36155-36174 | None:intergenic | 40.0% | |
| GGAAAAGGGAAATCCATTGA+TGG | - | tig0024736:36172-36191 | Msa1420020:CDS | 40.0% | |
| AGGAGAATGATCTCCATCAA+TGG | + | tig0024736:36188-36207 | None:intergenic | 40.0% | |
| TCTACTCCAATCCAAAAAGG+TGG | - | tig0024736:36238-36257 | Msa1420020:CDS | 40.0% | |
| !!! | ATTTTAAGGCTTGGTGCCAT+TGG | - | tig0024736:36292-36311 | Msa1420020:CDS | 40.0% |
| !! | TCTTGGTGCTTCTGTCATTA+TGG | - | tig0024736:36321-36340 | Msa1420020:intron | 40.0% |
| !! | CTTGGTGCTTCTGTCATTAT+GGG | - | tig0024736:36322-36341 | Msa1420020:intron | 40.0% |
| ! | TTGGTGCTTCTGTCATTATG+GGG | - | tig0024736:36323-36342 | Msa1420020:intron | 40.0% |
| TCCTTCAGTTTCATGCTCAA+TGG | - | tig0024736:36380-36399 | Msa1420020:intron | 40.0% | |
| CCTTCAGTTTCATGCTCAAT+GGG | - | tig0024736:36381-36400 | Msa1420020:intron | 40.0% | |
| AATTGCAAGGATATGAAGGG+AGG | + | tig0024736:36912-36931 | None:intergenic | 40.0% | |
| GCGAAATTGCAAGGATATGA+AGG | + | tig0024736:36916-36935 | None:intergenic | 40.0% | |
| CTATAGCAAGTAAAGATGCC+AGG | + | tig0024736:36938-36957 | None:intergenic | 40.0% | |
| CTAAACATGCAGGTTCTTTG+TGG | - | tig0024736:36984-37003 | Msa1420020:intron | 40.0% | |
| CAATTGAGAATGGTAAGGAG+AGG | + | tig0024736:37041-37060 | None:intergenic | 40.0% | |
| GCAGACAATTGAGAATGGTA+AGG | + | tig0024736:37046-37065 | None:intergenic | 40.0% | |
| AATGTTCGCTACCTAATTGC+AGG | - | tig0024736:37219-37238 | Msa1420020:CDS | 40.0% | |
| GGCCATTAATACCTGCAATT+AGG | + | tig0024736:37233-37252 | None:intergenic | 40.0% | |
| GTTGTGTACTTAGCACACAA+TGG | - | tig0024736:37286-37305 | Msa1420020:CDS | 40.0% | |
| !!! | CAGTTCACTGATTTTTGCCA+AGG | - | tig0024736:37343-37362 | Msa1420020:CDS | 40.0% |
| !! | GTCGGTTTTCCTATCTTGTT+TGG | - | tig0024736:37399-37418 | Msa1420020:CDS | 40.0% |
| ACACCACAACCAAACAAGAT+AGG | + | tig0024736:37411-37430 | None:intergenic | 40.0% | |
| TGTCTTCTGTAGCTCTCAAA+AGG | - | tig0024736:37428-37447 | Msa1420020:CDS | 40.0% | |
| !! | GTTCTCTTGGATTCTAGGAT+GGG | + | tig0024736:36142-36161 | None:intergenic | 40.0% |
| ! | TGTTCTCTTGGATTCTAGGA+TGG | + | tig0024736:36143-36162 | None:intergenic | 40.0% |
| TCCAAGAGAACAAGAAGCAA+TGG | - | tig0024736:36151-36170 | Msa1420020:CDS | 40.0% | |
| TCCATTGCTTCTTGTTCTCT+TGG | + | tig0024736:36155-36174 | None:intergenic | 40.0% | |
| GGAAAAGGGAAATCCATTGA+TGG | - | tig0024736:36172-36191 | Msa1420020:CDS | 40.0% | |
| AGGAGAATGATCTCCATCAA+TGG | + | tig0024736:36188-36207 | None:intergenic | 40.0% | |
| TCTACTCCAATCCAAAAAGG+TGG | - | tig0024736:36238-36257 | Msa1420020:CDS | 40.0% | |
| !!! | ATTTTAAGGCTTGGTGCCAT+TGG | - | tig0024736:36292-36311 | Msa1420020:CDS | 40.0% |
| !! | TCTTGGTGCTTCTGTCATTA+TGG | - | tig0024736:36321-36340 | Msa1420020:intron | 40.0% |
| !! | CTTGGTGCTTCTGTCATTAT+GGG | - | tig0024736:36322-36341 | Msa1420020:intron | 40.0% |
| ! | TTGGTGCTTCTGTCATTATG+GGG | - | tig0024736:36323-36342 | Msa1420020:intron | 40.0% |
| TCCTTCAGTTTCATGCTCAA+TGG | - | tig0024736:36380-36399 | Msa1420020:intron | 40.0% | |
| CCTTCAGTTTCATGCTCAAT+GGG | - | tig0024736:36381-36400 | Msa1420020:intron | 40.0% | |
| AATTGCAAGGATATGAAGGG+AGG | + | tig0024736:36912-36931 | None:intergenic | 40.0% | |
| GCGAAATTGCAAGGATATGA+AGG | + | tig0024736:36916-36935 | None:intergenic | 40.0% | |
| CTATAGCAAGTAAAGATGCC+AGG | + | tig0024736:36938-36957 | None:intergenic | 40.0% | |
| CTAAACATGCAGGTTCTTTG+TGG | - | tig0024736:36984-37003 | Msa1420020:intron | 40.0% | |
| CAATTGAGAATGGTAAGGAG+AGG | + | tig0024736:37041-37060 | None:intergenic | 40.0% | |
| GCAGACAATTGAGAATGGTA+AGG | + | tig0024736:37046-37065 | None:intergenic | 40.0% | |
| AATGTTCGCTACCTAATTGC+AGG | - | tig0024736:37219-37238 | Msa1420020:CDS | 40.0% | |
| GGCCATTAATACCTGCAATT+AGG | + | tig0024736:37233-37252 | None:intergenic | 40.0% | |
| GTTGTGTACTTAGCACACAA+TGG | - | tig0024736:37286-37305 | Msa1420020:CDS | 40.0% | |
| !!! | CAGTTCACTGATTTTTGCCA+AGG | - | tig0024736:37343-37362 | Msa1420020:CDS | 40.0% |
| !! | GTCGGTTTTCCTATCTTGTT+TGG | - | tig0024736:37399-37418 | Msa1420020:CDS | 40.0% |
| ACACCACAACCAAACAAGAT+AGG | + | tig0024736:37411-37430 | None:intergenic | 40.0% | |
| TGTCTTCTGTAGCTCTCAAA+AGG | - | tig0024736:37428-37447 | Msa1420020:CDS | 40.0% | |
| GGACTCAAGAAGAGAAGTTG+AGG | - | tig0024736:36102-36121 | Msa1420020:CDS | 45.0% | |
| GTAACAACAGTTGCAGCATG+TGG | + | tig0024736:36211-36230 | None:intergenic | 45.0% | |
| CCCATTGAGCATGAAACTGA+AGG | + | tig0024736:36384-36403 | None:intergenic | 45.0% | |
| CATATCCTTGCAATTTCGCC+TGG | - | tig0024736:36917-36936 | Msa1420020:intron | 45.0% | |
| AACATGCAGGTTCTTTGTGG+TGG | - | tig0024736:36987-37006 | Msa1420020:intron | 45.0% | |
| AGGTTCTTTGTGGTGGCAAA+TGG | - | tig0024736:36994-37013 | Msa1420020:intron | 45.0% | |
| ACGATGACAAGTAGAATCCG+TGG | + | tig0024736:37093-37112 | None:intergenic | 45.0% | |
| ! | GCAGGTATTAATGGCCTTAG+TGG | - | tig0024736:37237-37256 | Msa1420020:CDS | 45.0% |
| ATGGGAGTCAAGATGCAAAC+TGG | - | tig0024736:37305-37324 | Msa1420020:CDS | 45.0% | |
| !! | GGTTGTTTCTTTCGTTGCGT+CGG | - | tig0024736:37381-37400 | Msa1420020:CDS | 45.0% |
| GGACTCAAGAAGAGAAGTTG+AGG | - | tig0024736:36102-36121 | Msa1420020:CDS | 45.0% | |
| GTAACAACAGTTGCAGCATG+TGG | + | tig0024736:36211-36230 | None:intergenic | 45.0% | |
| CCCATTGAGCATGAAACTGA+AGG | + | tig0024736:36384-36403 | None:intergenic | 45.0% | |
| CATATCCTTGCAATTTCGCC+TGG | - | tig0024736:36917-36936 | Msa1420020:intron | 45.0% | |
| AACATGCAGGTTCTTTGTGG+TGG | - | tig0024736:36987-37006 | Msa1420020:intron | 45.0% | |
| AGGTTCTTTGTGGTGGCAAA+TGG | - | tig0024736:36994-37013 | Msa1420020:intron | 45.0% | |
| ACGATGACAAGTAGAATCCG+TGG | + | tig0024736:37093-37112 | None:intergenic | 45.0% | |
| ! | GCAGGTATTAATGGCCTTAG+TGG | - | tig0024736:37237-37256 | Msa1420020:CDS | 45.0% |
| ATGGGAGTCAAGATGCAAAC+TGG | - | tig0024736:37305-37324 | Msa1420020:CDS | 45.0% | |
| !! | GGTTGTTTCTTTCGTTGCGT+CGG | - | tig0024736:37381-37400 | Msa1420020:CDS | 45.0% |
| ACAACAGTTGCAGCATGTGG+AGG | + | tig0024736:36208-36227 | None:intergenic | 50.0% | |
| AGCACCAAGAGTAGCACCAA+TGG | + | tig0024736:36311-36330 | None:intergenic | 50.0% | |
| AGATGCCAGGCGAAATTGCA+AGG | + | tig0024736:36925-36944 | None:intergenic | 50.0% | |
| ATTGTTAGACCCCTTGCAGC+TGG | - | tig0024736:37066-37085 | Msa1420020:intron | 50.0% | |
| TGAAGCAGCTGCAACCACTA+AGG | + | tig0024736:37254-37273 | None:intergenic | 50.0% | |
| CCACAGCCAAACTTGAACCT+TGG | + | tig0024736:37363-37382 | None:intergenic | 50.0% | |
| ! | CCAAGGTTCAAGTTTGGCTG+TGG | - | tig0024736:37360-37379 | Msa1420020:CDS | 50.0% |
| ACAACAGTTGCAGCATGTGG+AGG | + | tig0024736:36208-36227 | None:intergenic | 50.0% | |
| AGCACCAAGAGTAGCACCAA+TGG | + | tig0024736:36311-36330 | None:intergenic | 50.0% | |
| AGATGCCAGGCGAAATTGCA+AGG | + | tig0024736:36925-36944 | None:intergenic | 50.0% | |
| ATTGTTAGACCCCTTGCAGC+TGG | - | tig0024736:37066-37085 | Msa1420020:intron | 50.0% | |
| TGAAGCAGCTGCAACCACTA+AGG | + | tig0024736:37254-37273 | None:intergenic | 50.0% | |
| CCACAGCCAAACTTGAACCT+TGG | + | tig0024736:37363-37382 | None:intergenic | 50.0% | |
| ! | CCAAGGTTCAAGTTTGGCTG+TGG | - | tig0024736:37360-37379 | Msa1420020:CDS | 50.0% |
| !! | GGTGCCATTGGTGCTACTCT+TGG | - | tig0024736:36304-36323 | Msa1420020:intron | 55.0% |
| AATCCGTGGACCAGCTGCAA+GGG | + | tig0024736:37079-37098 | None:intergenic | 55.0% | |
| !! | GGTGCCATTGGTGCTACTCT+TGG | - | tig0024736:36304-36323 | Msa1420020:intron | 55.0% |
| AATCCGTGGACCAGCTGCAA+GGG | + | tig0024736:37079-37098 | None:intergenic | 55.0% | |
| GTGGCAAATGGAGCAGCAGC+TGG | - | tig0024736:37006-37025 | Msa1420020:intron | 60.0% | |
| ATCCGTGGACCAGCTGCAAG+GGG | + | tig0024736:37078-37097 | None:intergenic | 60.0% | |
| GAATCCGTGGACCAGCTGCA+AGG | + | tig0024736:37080-37099 | None:intergenic | 60.0% | |
| GTGGCAAATGGAGCAGCAGC+TGG | - | tig0024736:37006-37025 | Msa1420020:intron | 60.0% | |
| ATCCGTGGACCAGCTGCAAG+GGG | + | tig0024736:37078-37097 | None:intergenic | 60.0% | |
| GAATCCGTGGACCAGCTGCA+AGG | + | tig0024736:37080-37099 | None:intergenic | 60.0% | |
| GACCCCTTGCAGCTGGTCCA+CGG | - | tig0024736:37073-37092 | Msa1420020:intron | 65.0% | |
| GACCCCTTGCAGCTGGTCCA+CGG | - | tig0024736:37073-37092 | Msa1420020:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0024736 | gene | 36100 | 37456 | 36100 | ID=Msa1420020;Name=Msa1420020 |
| tig0024736 | mRNA | 36100 | 37456 | 36100 | ID=Msa1420020-mRNA-1;Parent=Msa1420020;Name=Msa1420020-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0|0|1|1|1|3|0|220 |
| tig0024736 | exon | 37134 | 37456 | 37134 | ID=Msa1420020-mRNA-1:exon:1219;Parent=Msa1420020-mRNA-1 |
| tig0024736 | exon | 36437 | 36560 | 36437 | ID=Msa1420020-mRNA-1:exon:1218;Parent=Msa1420020-mRNA-1 |
| tig0024736 | exon | 36100 | 36315 | 36100 | ID=Msa1420020-mRNA-1:exon:1217;Parent=Msa1420020-mRNA-1 |
| tig0024736 | CDS | 37134 | 37456 | 37134 | ID=Msa1420020-mRNA-1:cds;Parent=Msa1420020-mRNA-1 |
| tig0024736 | CDS | 36437 | 36560 | 36437 | ID=Msa1420020-mRNA-1:cds;Parent=Msa1420020-mRNA-1 |
| tig0024736 | CDS | 36100 | 36315 | 36100 | ID=Msa1420020-mRNA-1:cds;Parent=Msa1420020-mRNA-1 |
| Gene Sequence |
| Protein sequence |
