AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1391720


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1391720 MtrunA17_Chr7g0270131 98.198 777 11 2 1 776 1 775 0.0 1556
Msa1391720 MtrunA17_Chr2g0277821 45.276 561 273 8 69 612 341 884 1.18e-142 447
Msa1391720 MtrunA17_Chr2g0330401 49.652 431 213 4 180 608 42 470 2.82e-138 417
Msa1391720 MtrunA17_Chr4g0058591 49.315 365 183 2 191 554 160 523 1.56e-114 357
Msa1391720 MtrunA17_Chr6g0449911 43.187 433 228 7 214 643 146 563 7.61e-109 348
Msa1391720 MtrunA17_Chr2g0293631 43.961 414 218 7 210 614 467 875 8.07e-105 348
Msa1391720 MtrunA17_Chr3g0107851 41.687 403 220 5 197 586 77 477 2.46e-103 329
Msa1391720 MtrunA17_Chr4g0076491 40.783 434 234 6 195 608 249 679 1.44e-101 328
Msa1391720 MtrunA17_Chr6g0449741 40.783 434 232 7 195 608 211 639 4.34e-100 323
Msa1391720 MtrunA17_Chr1g0176041 40.295 474 247 9 191 645 114 570 4.19e-98 317
Msa1391720 MtrunA17_Chr3g0121351 39.400 467 240 9 171 614 94 540 4.74e-95 308
Msa1391720 MtrunA17_Chr1g0200181 42.163 453 239 10 203 642 115 557 4.93e-94 305
Msa1391720 MtrunA17_Chr1g0157691 40.166 483 246 11 203 666 117 575 5.60e-93 302
Msa1391720 MtrunA17_Chr5g0409981 43.655 394 211 7 223 609 94 483 9.82e-93 300
Msa1391720 MtrunA17_Chr4g0063551 40.964 415 225 6 216 612 123 535 1.23e-91 301
Msa1391720 MtrunA17_Chr7g0236841 37.190 363 219 6 229 589 6 361 3.78e-70 237
Msa1391720 MtrunA17_Chr6g0483491 36.464 362 223 5 229 589 6 361 5.20e-70 236
Msa1391720 MtrunA17_Chr7g0263771 34.975 406 251 6 214 614 110 507 3.45e-69 239
Msa1391720 MtrunA17_Chr4g0040761 37.017 362 221 6 234 593 20 376 5.75e-66 234
Msa1391720 MtrunA17_Chr3g0095031 36.512 367 220 6 224 588 88 443 8.13e-65 226
Msa1391720 MtrunA17_Chr3g0098121 36.387 382 229 6 233 604 152 529 5.23e-64 228
Msa1391720 MtrunA17_Chr2g0310581 36.512 367 219 7 233 593 53 411 1.88e-62 218
Msa1391720 MtrunA17_Chr2g0297261 33.705 359 221 6 229 582 30 376 8.44e-62 213
Msa1391720 MtrunA17_Chr2g0300291 36.292 383 229 7 233 604 141 519 1.42e-61 221
Msa1391720 MtrunA17_Chr5g0442191 35.422 367 224 6 224 588 79 434 2.73e-61 217
Msa1391720 MtrunA17_Chr2g0329931 34.530 362 230 4 232 593 40 394 4.65e-61 211
Msa1391720 MtrunA17_Chr1g0193491 38.547 358 207 7 238 588 119 470 5.08e-61 217
Msa1391720 MtrunA17_Chr7g0271121 38.375 357 207 8 239 588 111 461 7.39e-61 219
Msa1391720 MtrunA17_Chr8g0342861 34.072 361 231 4 233 593 41 394 8.79e-60 208
Msa1391720 MtrunA17_Chr4g0070981 34.930 355 222 6 233 586 41 387 1.36e-58 204
Msa1391720 MtrunA17_Chr2g0299681 33.795 361 232 4 233 593 41 394 1.38e-58 204
Msa1391720 MtrunA17_Chr6g0461751 30.549 419 274 8 200 610 109 518 1.14e-57 206
Msa1391720 MtrunA17_Chr8g0347151 36.119 371 219 11 234 589 202 569 7.50e-53 195
Msa1391720 MtrunA17_Chr6g0475251 33.594 384 217 11 222 590 104 464 1.22e-52 194
Msa1391720 MtrunA17_Chr8g0347161 35.135 370 224 11 234 589 103 470 8.78e-52 190
Msa1391720 MtrunA17_Chr7g0247221 31.373 357 233 7 234 589 144 489 2.43e-51 187
Msa1391720 MtrunA17_Chr7g0247181 31.373 357 233 7 234 589 141 486 3.50e-51 187
Msa1391720 MtrunA17_Chr7g0247191 31.092 357 234 7 234 589 151 496 1.43e-50 185
Msa1391720 MtrunA17_Chr8g0347171 34.595 370 226 12 234 589 161 528 1.72e-50 187
Msa1391720 MtrunA17_Chr1g0192021 30.216 417 242 8 232 603 25 437 2.64e-50 186
Msa1391720 MtrunA17_Chr4g0062301 34.181 354 224 6 246 593 110 460 4.15e-50 185
Msa1391720 MtrunA17_Chr8g0386451 34.225 374 230 10 234 593 289 660 1.59e-49 186
Msa1391720 MtrunA17_Chr7g0236831 32.564 433 210 14 234 591 164 589 2.73e-48 183
Msa1391720 MtrunA17_Chr3g0114081 32.609 368 227 7 243 590 26 392 7.18e-48 179
Msa1391720 MtrunA17_Chr6g0466611 30.688 378 245 7 231 593 140 515 1.02e-47 181
Msa1391720 MtrunA17_Chr4g0003441 31.564 358 225 10 234 583 109 454 1.15e-47 176
Msa1391720 MtrunA17_Chr5g0443991 37.578 322 190 8 256 570 99 416 7.82e-47 178
Msa1391720 MtrunA17_Chr2g0307471 31.680 363 240 5 232 589 90 449 1.12e-46 175
Msa1391720 MtrunA17_Chr1g0204391 31.026 390 217 11 222 581 45 412 2.64e-46 174
Msa1391720 MtrunA17_Chr4g0034411 36.137 321 195 8 256 570 99 415 4.61e-45 173
Msa1391720 MtrunA17_Chr4g0029191 29.567 416 218 13 233 574 44 458 5.11e-45 171
Msa1391720 MtrunA17_Chr2g0301281 29.087 416 220 13 233 574 41 455 5.70e-44 168
Msa1391720 MtrunA17_Chr2g0309551 28.873 426 243 8 228 597 104 525 1.72e-40 157
Msa1391720 MtrunA17_Chr1g0149251 30.503 318 207 8 271 583 2 310 3.45e-40 151
Msa1391720 MtrunA17_Chr1g0179761 29.630 378 232 12 233 583 80 450 2.98e-39 152
Msa1391720 MtrunA17_Chr5g0429221 26.512 430 286 12 231 647 1 413 4.33e-38 147
Msa1391720 MtrunA17_Chr3g0145781 26.598 391 259 8 231 594 130 519 4.06e-36 144
Msa1391720 MtrunA17_Chr4g0039471 36.683 199 118 3 233 428 223 416 1.19e-29 122
Msa1391720 MtrunA17_Chr4g0039471 31.500 200 84 4 233 427 2 153 1.79e-19 91.7
Msa1391720 MtrunA17_Chr8g0349951 36.943 157 94 2 229 384 6 158 1.55e-28 112
Msa1391720 MtrunA17_Chr1g0169331 25.995 377 229 8 250 587 8 373 5.11e-28 117
Msa1391720 MtrunA17_Chr4g0062321 31.646 237 151 6 314 546 4 233 2.37e-24 102
Msa1391720 MtrunA17_Chr5g0434301 23.604 394 221 8 270 594 70 452 5.86e-24 106
Msa1391720 MtrunA17_Chr4g0004301 23.350 394 222 8 270 594 70 452 4.27e-23 103
Msa1391720 MtrunA17_Chr8g0342851 26.023 342 200 13 262 593 2 300 5.22e-22 97.8
Msa1391720 MtrunA17_Chr4g0074521 28.186 408 239 18 227 593 76 470 5.56e-21 97.1
Msa1391720 MtrunA17_Chr3g0137891 34.503 171 100 6 271 436 2 165 2.05e-19 88.2
Msa1391720 MtrunA17_Chr2g0300871 25.150 334 219 9 251 570 39 355 4.67e-18 89.0
Msa1391720 MtrunA17_Chr4g0025131 32.370 173 109 4 223 392 46 213 2.38e-16 80.5
Msa1391720 MtrunA17_Chr3g0137901 31.034 116 79 1 468 583 32 146 9.32e-15 73.2
Msa1391720 MtrunA17_Chr4g0025141 27.273 187 122 4 412 585 15 200 9.60e-14 71.6
Msa1391720 MtrunA17_Chr4g0058601 48.000 75 38 1 542 616 9 82 2.18e-13 67.4
Msa1391720 MtrunA17_Chr1g0171481 23.380 355 252 12 268 611 175 520 5.79e-13 72.4
Msa1391720 MtrunA17_Chr0c30g0494091 30.769 208 127 7 227 422 76 278 6.14e-13 71.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1391720 AT2G47330.1 77.606 777 154 10 1 775 1 759 0.0 1139
Msa1391720 AT1G20920.2 43.212 604 311 12 52 641 10 595 2.04e-144 445
Msa1391720 AT5G63120.2 51.659 422 201 3 192 612 125 544 2.52e-142 431
Msa1391720 AT1G20920.4 44.505 555 286 8 68 612 368 910 1.32e-141 446
Msa1391720 AT1G20920.6 44.505 555 286 8 68 612 368 910 1.32e-141 446
Msa1391720 AT1G20920.3 44.505 555 286 8 68 612 368 910 1.32e-141 446
Msa1391720 AT1G20920.7 44.505 555 286 8 68 612 368 910 1.32e-141 446
Msa1391720 AT1G20920.5 44.505 555 286 8 68 612 368 910 1.32e-141 446
Msa1391720 AT1G20920.1 44.505 555 286 8 68 612 368 910 1.32e-141 446
Msa1391720 AT1G55150.1 49.526 422 210 3 191 611 58 477 7.58e-138 417
Msa1391720 AT1G55150.2 49.526 422 210 3 191 611 83 502 8.11e-137 415
Msa1391720 AT3G09620.2 43.920 551 262 9 68 612 240 749 6.53e-130 411
Msa1391720 AT3G09620.1 43.920 551 262 9 68 612 239 748 8.04e-130 411
Msa1391720 AT5G63120.1 51.852 351 167 2 192 541 125 474 1.12e-118 367
Msa1391720 AT5G63120.3 51.852 351 167 2 192 541 125 474 1.70e-118 366
Msa1391720 AT5G63120.4 51.852 351 167 2 192 541 125 474 1.70e-118 366
Msa1391720 AT5G63120.5 51.852 351 167 2 192 541 125 474 1.70e-118 366
Msa1391720 AT5G14610.6 42.344 418 235 5 201 616 130 543 7.84e-106 338
Msa1391720 AT5G14610.2 42.344 418 235 5 201 616 130 543 8.40e-106 338
Msa1391720 AT5G14610.5 42.344 418 235 5 201 616 138 551 1.45e-105 338
Msa1391720 AT3G01540.1 42.143 420 233 7 201 616 127 540 1.14e-104 334
Msa1391720 AT3G01540.4 42.143 420 233 7 201 616 127 540 1.21e-104 334
Msa1391720 AT3G01540.2 42.143 420 233 7 201 616 127 540 1.21e-104 334
Msa1391720 AT3G01540.3 42.143 420 233 7 201 616 127 540 1.21e-104 334
Msa1391720 AT3G06480.1 42.689 424 233 7 194 614 399 815 2.65e-104 345
Msa1391720 AT2G33730.1 41.784 426 225 6 203 608 284 706 5.44e-102 331
Msa1391720 AT2G42520.2 42.478 452 236 7 182 614 108 554 1.04e-101 327
Msa1391720 AT2G42520.1 42.478 452 236 7 182 614 108 554 1.04e-101 327
Msa1391720 AT2G42520.3 42.478 452 236 7 182 614 108 554 1.04e-101 327
Msa1391720 AT3G58510.1 41.333 450 241 8 182 614 101 544 1.21e-98 318
Msa1391720 AT3G58510.3 41.333 450 241 8 182 614 101 544 1.21e-98 318
Msa1391720 AT3G58510.2 41.333 450 241 8 182 614 101 544 1.21e-98 318
Msa1391720 AT5G14610.7 43.817 372 203 5 247 616 45 412 7.41e-97 310
Msa1391720 AT5G14610.3 43.817 372 203 5 247 616 45 412 7.41e-97 310
Msa1391720 AT5G14610.1 43.817 372 203 5 247 616 244 611 1.38e-96 316
Msa1391720 AT3G58570.1 40.222 450 248 9 182 614 96 541 5.38e-96 312
Msa1391720 AT5G51280.1 40.798 451 248 8 203 642 117 559 4.62e-93 303
Msa1391720 AT4G33370.1 37.910 488 285 8 172 649 38 517 7.71e-92 298
Msa1391720 AT1G31970.1 41.604 399 221 7 231 621 115 509 1.39e-87 287
Msa1391720 AT5G14610.4 42.693 349 195 4 201 547 138 483 3.92e-87 285
Msa1391720 AT3G06480.2 43.213 361 194 7 194 550 399 752 1.00e-85 288
Msa1391720 AT1G28180.1 44.785 326 171 5 262 583 3 323 2.84e-81 265
Msa1391720 AT3G09720.2 34.615 416 258 8 215 624 120 527 3.78e-71 243
Msa1391720 AT3G09720.1 34.615 416 258 8 215 624 120 527 3.78e-71 243
Msa1391720 AT5G60990.1 34.688 369 226 6 231 589 8 371 1.19e-66 228
Msa1391720 AT1G16280.1 36.885 366 217 7 234 593 60 417 4.26e-65 225
Msa1391720 AT1G77030.1 36.957 368 213 8 234 593 30 386 4.15e-64 230
Msa1391720 AT3G22330.1 35.775 355 222 5 236 588 108 458 6.06e-63 223
Msa1391720 AT3G02065.3 31.435 439 278 9 196 622 75 502 2.70e-62 218
Msa1391720 AT3G02065.2 31.435 439 278 9 196 622 75 502 2.70e-62 218
Msa1391720 AT3G13920.1 35.278 360 220 5 232 588 39 388 3.74e-62 215
Msa1391720 AT3G13920.3 35.278 360 220 5 232 588 29 378 4.51e-62 214
Msa1391720 AT3G13920.5 35.278 360 220 5 232 588 43 392 5.67e-62 214
Msa1391720 AT3G13920.2 35.278 360 220 5 232 588 39 388 6.52e-62 214
Msa1391720 AT4G16630.1 36.544 353 219 4 233 583 168 517 9.87e-62 222
Msa1391720 AT3G19760.1 32.213 357 229 5 229 582 32 378 3.32e-61 212
Msa1391720 AT1G54270.1 35.278 360 220 5 232 588 39 388 3.47e-61 212
Msa1391720 AT3G22310.2 36.415 357 217 7 236 588 120 470 7.05e-61 216
Msa1391720 AT3G22310.1 36.415 357 217 7 236 588 120 470 9.38e-61 216
Msa1391720 AT3G13920.4 36.257 342 205 5 250 588 52 383 1.66e-60 210
Msa1391720 AT1G54270.2 36.257 342 205 5 250 588 52 383 1.29e-59 207
Msa1391720 AT5G26742.1 38.462 351 202 7 246 588 116 460 1.52e-59 216
Msa1391720 AT5G26742.2 38.462 351 202 7 246 588 116 460 1.54e-59 216
Msa1391720 AT1G51380.1 33.148 359 223 6 229 582 19 365 2.36e-59 206
Msa1391720 AT1G72730.1 33.241 361 234 4 233 593 42 395 2.83e-58 204
Msa1391720 AT5G26742.3 39.394 330 186 7 267 588 44 367 5.62e-58 209
Msa1391720 AT4G00660.1 31.653 357 232 7 234 589 133 478 5.90e-54 195
Msa1391720 AT4G00660.2 31.653 357 232 7 234 589 133 478 5.90e-54 195
Msa1391720 AT5G65900.1 34.254 362 231 6 232 589 154 512 1.11e-52 194
Msa1391720 AT3G18600.1 33.889 360 232 5 233 589 90 446 3.09e-52 191
Msa1391720 AT5G62190.1 36.103 349 199 9 247 581 111 449 5.14e-50 187
Msa1391720 AT5G08610.1 33.693 371 228 11 234 589 384 751 1.01e-49 188
Msa1391720 AT5G63630.2 33.155 374 234 8 234 593 250 621 4.16e-49 185
Msa1391720 AT2G45810.1 30.337 356 238 7 234 589 156 501 4.42e-49 181
Msa1391720 AT3G61240.2 29.494 356 241 6 234 589 126 471 4.85e-49 181
Msa1391720 AT3G61240.1 29.494 356 241 6 234 589 126 471 4.85e-49 181
Msa1391720 AT5G63630.1 33.155 374 234 8 234 593 56 427 9.34e-49 181
Msa1391720 AT3G02065.1 30.108 372 242 7 261 622 2 365 7.33e-48 174
Msa1391720 AT3G53110.1 31.507 365 229 8 234 582 93 452 1.25e-47 177
Msa1391720 AT5G11170.1 31.268 355 228 9 234 582 48 392 3.14e-47 174
Msa1391720 AT5G11200.1 31.268 355 228 9 234 582 48 392 3.14e-47 174
Msa1391720 AT4G34910.1 33.248 391 204 8 232 571 46 430 3.47e-47 178
Msa1391720 AT4G09730.1 32.208 385 234 10 229 593 109 486 6.39e-47 177
Msa1391720 AT5G08620.1 33.243 370 231 10 234 589 82 449 1.21e-45 172
Msa1391720 AT1G63250.1 32.626 377 237 9 232 593 328 702 1.26e-45 176
Msa1391720 AT2G07750.1 32.626 377 237 9 232 593 375 749 1.32e-45 176
Msa1391720 AT5G54910.1 35.260 346 214 8 231 570 70 411 6.79e-45 173
Msa1391720 AT2G40700.1 30.159 441 222 15 233 593 31 465 8.02e-44 168
Msa1391720 AT1G71370.1 33.241 361 222 7 243 590 27 381 2.42e-43 166
Msa1391720 AT5G05450.1 33.151 365 221 9 243 587 27 388 3.12e-43 166
Msa1391720 AT5G11200.3 28.499 393 230 10 234 582 48 433 1.15e-42 162
Msa1391720 AT1G12770.2 28.928 401 229 8 232 578 110 508 7.23e-42 161
Msa1391720 AT1G12770.1 28.928 401 229 8 232 578 110 508 7.23e-42 161
Msa1391720 AT3G16840.1 30.676 414 219 11 241 587 199 611 3.85e-41 162
Msa1391720 AT3G16840.2 30.676 414 219 11 241 587 200 612 4.16e-41 162
Msa1391720 AT5G11200.2 27.737 411 228 12 234 582 48 451 9.36e-40 154
Msa1391720 AT5G11170.2 31.447 318 202 9 271 582 2 309 5.60e-39 148
Msa1391720 AT3G06980.1 27.229 415 269 10 209 594 351 761 7.82e-38 152
Msa1391720 AT1G71280.2 33.225 307 173 7 243 543 28 308 7.70e-35 136
Msa1391720 AT1G71280.1 32.704 318 182 7 243 554 28 319 2.42e-34 137
Msa1391720 AT1G51380.2 31.855 248 156 4 229 474 19 255 1.65e-31 125
Msa1391720 AT1G51380.4 33.645 214 133 3 229 440 19 225 4.37e-30 121
Msa1391720 AT1G51380.3 33.645 214 133 3 229 440 19 225 8.74e-30 120
Msa1391720 AT1G28180.2 49.138 116 56 1 262 374 3 118 2.43e-29 113
Msa1391720 AT4G15850.1 25.561 446 253 12 222 594 15 454 7.61e-26 112
Msa1391720 AT5G19210.2 28.058 417 236 17 226 596 68 466 2.57e-24 107
Msa1391720 AT1G59990.2 26.383 235 139 8 233 449 81 299 7.08e-17 85.1
Msa1391720 AT1G59990.1 26.383 235 139 8 233 449 81 299 9.39e-17 84.7
Msa1391720 AT2G28600.1 26.235 324 209 12 305 615 196 502 5.82e-15 79.0

Find 209 sgRNAs with CRISPR-Local

Find 332 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTTTACCGGTTGTGCTTTC+TGG 0.101108 tig0021446:-78090 Msa1391720:CDS
TTGAGGGCGAAGAAGGATTT+AGG 0.143289 tig0021446:-78985 Msa1391720:CDS
TATTACTGAATCCTTCATTT+TGG 0.152380 tig0021446:+75638 None:intergenic
CAACGAAGCTACTCCTAAAT+TGG 0.189044 tig0021446:+75677 None:intergenic
TGAGAAATTGCCGTGGCTTC+TGG 0.210686 tig0021446:-77491 Msa1391720:CDS
ACCGCGTATGGTCGAGTTTC+TGG 0.230165 tig0021446:+79572 None:intergenic
TGAGGGAGATAATGGAATTT+AGG 0.250084 tig0021446:+79460 None:intergenic
AGTTTGGCTATTCGGGTATC+AGG 0.250256 tig0021446:-78225 Msa1391720:CDS
GAGTTTCTGGTTAAATTAAA+AGG 0.280723 tig0021446:+79585 None:intergenic
CTTTGATATTGCTAAAGATA+TGG 0.286650 tig0021446:-77221 Msa1391720:CDS
CAGGAATGATGTCCCAATTT+AGG 0.287222 tig0021446:-75690 Msa1391720:CDS
ATAAAATTTGAGGGAGATAA+TGG 0.287590 tig0021446:+79452 None:intergenic
ATATGCTTTAGCAAATTTCT+TGG 0.299619 tig0021446:+77900 None:intergenic
TGGGTTTGCTCCACAAATTA+TGG 0.309744 tig0021446:-78163 Msa1391720:CDS
CCTTCCTCCTTCTGAAGTTC+AGG 0.311889 tig0021446:+77982 None:intergenic
TTCCGCAGGACGGGAGATTC+AGG 0.312404 tig0021446:-76059 Msa1391720:intron
GTTGTTTGATTGTTCTTCTC+TGG 0.315342 tig0021446:+79182 None:intergenic
TAGATATAAAGATGATTTAG+AGG 0.320038 tig0021446:-79028 Msa1391720:CDS
ATAGGAAGAGTTTGGCTATT+CGG 0.322771 tig0021446:-78233 Msa1391720:CDS
GGCGAAGTCTTGATTTGATT+TGG 0.325501 tig0021446:-75243 Msa1391720:three_prime_UTR
TCCACTTTCTCCTTCGGCTT+CGG 0.327604 tig0021446:+79054 None:intergenic
ATCACCTTGATCAATCATTT+CGG 0.328986 tig0021446:+77459 None:intergenic
TATACAATGCCAAGCTTTAC+CGG 0.334510 tig0021446:-78103 Msa1391720:CDS
AATTCCACTAGTCAAAATTC+TGG 0.335286 tig0021446:-75493 Msa1391720:CDS
TAGGAAGAGTTTGGCTATTC+GGG 0.336769 tig0021446:-78232 Msa1391720:CDS
ACACTAGCTGGCTTTGTATC+TGG 0.337129 tig0021446:-75586 Msa1391720:CDS
TCACCTTGATCAATCATTTC+GGG 0.344876 tig0021446:+77460 None:intergenic
GCGTCATCTAACGCAGTTCC+AGG 0.353849 tig0021446:-75742 Msa1391720:CDS
AAGAAATTTGCTAAAGCATA+TGG 0.357035 tig0021446:-77898 Msa1391720:CDS
CTATCTTCCACTTTCTCCTT+CGG 0.357308 tig0021446:+79048 None:intergenic
TGAGGGCGAAGAAGGATTTA+GGG 0.361115 tig0021446:-78984 Msa1391720:CDS
CGATCCATTAGATGCATTCA+TGG 0.362487 tig0021446:-79112 Msa1391720:CDS
CCTTCCATGAATGCATCTAA+TGG 0.370763 tig0021446:+79108 None:intergenic
GAGGAGTCACCTTCAATATC+AGG 0.374150 tig0021446:-78760 Msa1391720:intron
AGCACGGTTTGCTGGTGAAT+TGG 0.382223 tig0021446:-77116 Msa1391720:CDS
GGTGTGCGCGGAGTTGATTT+TGG 0.387275 tig0021446:-75799 Msa1391720:CDS
TTCTTCTTGTCAAGAACAAT+AGG 0.387443 tig0021446:+78850 None:intergenic
ATACGTGTCTCTGCTGTCTA+TGG 0.389174 tig0021446:-77874 Msa1391720:CDS
TTTATAGCACCCATAATTTG+TGG 0.390337 tig0021446:+78153 None:intergenic
AGCATGTCTATCAATCTTCC+AGG 0.392561 tig0021446:+77787 None:intergenic
ATTGTATTGAGTACTGAAAA+AGG 0.392866 tig0021446:-75166 Msa1391720:three_prime_UTR
AGCAAGATGTAACTGATTAT+AGG 0.393214 tig0021446:-78251 Msa1391720:CDS
CTAGTGGAATTTACAGTTGA+AGG 0.393513 tig0021446:+75505 None:intergenic
ATCGTGTGCAAGCTCAAGTT+AGG 0.394769 tig0021446:-79427 Msa1391720:five_prime_UTR
AAGAGCAAGGTTTGGCGGTC+CGG 0.397692 tig0021446:+77649 None:intergenic
GGCATAGCGAAAACTGGTTC+TGG 0.399093 tig0021446:-78054 Msa1391720:CDS
GCTTCGAAATTTCACTAAGA+AGG 0.405131 tig0021446:+79397 None:intergenic
GAATGTGTCCACGGAGTTGA+TGG 0.406543 tig0021446:-77068 Msa1391720:CDS
GGATGAAATTGAAGCACAAT+TGG 0.408212 tig0021446:-77404 Msa1391720:CDS
GCTGATCGAATGTTTGATCT+TGG 0.409409 tig0021446:-77712 Msa1391720:CDS
ATCATTGGCATAGCGAAAAC+TGG 0.412683 tig0021446:-78060 Msa1391720:CDS
AAGTTCGGATTCGAAGGTTT+CGG 0.413016 tig0021446:-79339 Msa1391720:CDS
TCTCCCACTGTCACTCTGAT+AGG 0.413022 tig0021446:+77571 None:intergenic
GGGTTTGCTCCACAAATTAT+GGG 0.419490 tig0021446:-78162 Msa1391720:CDS
GATGGCCTTCGCCTTTCTCT+AGG 0.422928 tig0021446:+75341 None:intergenic
AACTGATTATAGGAAGAGTT+TGG 0.423334 tig0021446:-78241 Msa1391720:CDS
CAGAAGGAGGAAGGTCCTAT+AGG 0.424404 tig0021446:-77973 Msa1391720:CDS
AGAAAAGGCAAAGGCAGAGG+TGG 0.426446 tig0021446:-75838 Msa1391720:CDS
GTTCATCGCATTGGAAGAAC+AGG 0.434588 tig0021446:-77190 Msa1391720:CDS
TTTGTATCTGGTGGATCAAT+TGG 0.445406 tig0021446:-75574 Msa1391720:CDS
TCCTATGATCGTGCATATCA+TGG 0.445806 tig0021446:-78010 Msa1391720:CDS
GTATGAATGCTCATATTTGT+AGG 0.446604 tig0021446:-75264 Msa1391720:three_prime_UTR
AAATGTTTGAGCCTTGGCTC+TGG 0.447230 tig0021446:+75121 None:intergenic
ATGAAGGTGAAGGCGAGTAT+AGG 0.448263 tig0021446:+79608 None:intergenic
GCTGTAAATTCTCTGCGAAC+AGG 0.449877 tig0021446:-75709 Msa1391720:CDS
TTGCAGAAAAGAGCAAGGTT+TGG 0.450948 tig0021446:+77641 None:intergenic
GTATGATCAAGAGGAGCAAT+AGG 0.454941 tig0021446:+78820 None:intergenic
GCTGCTAAAGCCGTGGATGC+TGG 0.457028 tig0021446:-78901 Msa1391720:CDS
TCCATGATATGCACGATCAT+AGG 0.458040 tig0021446:+78009 None:intergenic
GTTAATAGCTTAGTTGCTGC+TGG 0.458763 tig0021446:-77094 Msa1391720:CDS
TATCTGATGTGCCAATTCTC+TGG 0.460585 tig0021446:+77933 None:intergenic
TTCTCCTTCGGCTTCGGTGG+CGG 0.461021 tig0021446:+79060 None:intergenic
GAGAGAAAATGTTTGAGCCT+TGG 0.462374 tig0021446:+75115 None:intergenic
ATGTGCACCTACCAGAGAAT+TGG 0.464889 tig0021446:-77944 Msa1391720:CDS
AGAGAAAGGCGAAGGCCATC+AGG 0.465859 tig0021446:-75338 Msa1391720:CDS
CTGGTCAGAACAACACGAAC+AGG 0.473022 tig0021446:-75462 Msa1391720:intron
AACGAAGCTACTCCTAAATT+GGG 0.473246 tig0021446:+75678 None:intergenic
GTTAAATTACCTGATATTGA+AGG 0.475683 tig0021446:+78751 None:intergenic
GGTGCACATATCACTCCTAT+AGG 0.477608 tig0021446:+77958 None:intergenic
CACACGATAAATAAAATTTG+AGG 0.479547 tig0021446:+79442 None:intergenic
CTGTTCGTGTTGTTCTGACC+AGG 0.479959 tig0021446:+75463 None:intergenic
AAGGCGAAGGCCATCAGGTT+GGG 0.481451 tig0021446:-75333 Msa1391720:CDS
TGGTTAAATTAAAAGGATGA+AGG 0.487338 tig0021446:+79592 None:intergenic
TGCTGCCCTGCATGGTGATA+AGG 0.489958 tig0021446:-77362 Msa1391720:CDS
ATTGGAAGAACAGGCCGTGC+TGG 0.490716 tig0021446:-77181 Msa1391720:CDS
GAGATGTCGAAGAGAAAGTT+CGG 0.490965 tig0021446:-79354 Msa1391720:CDS
GGGAGAAAAGGCAAAGGCAG+AGG 0.492204 tig0021446:-75841 Msa1391720:CDS
CAAAATTCTGGAGTAAATCC+TGG 0.496585 tig0021446:-75481 Msa1391720:CDS
ACACGATAAATAAAATTTGA+GGG 0.499452 tig0021446:+79443 None:intergenic
TTGGATTTGAGCCGCAAGTA+AGG 0.501136 tig0021446:-77693 Msa1391720:CDS
GTTGATGGATCTTGCTATGA+AGG 0.502001 tig0021446:-77053 Msa1391720:intron
AATAAGAGACCAACACTAGC+TGG 0.504667 tig0021446:-75598 Msa1391720:CDS
GTATCTGGTGGATCAATTGG+CGG 0.505944 tig0021446:-75571 Msa1391720:CDS
TTGAGATCGTTCGAAACTAT+AGG 0.506823 tig0021446:+79299 None:intergenic
GAATTTACAGTTGAAGGAGC+AGG 0.508575 tig0021446:+75511 None:intergenic
TCTCTACCAGAAAGCACAAC+CGG 0.508638 tig0021446:+78084 None:intergenic
AAAGGCAAAGGCAGAGGTGG+GGG 0.509419 tig0021446:-75835 Msa1391720:CDS
TTTAGGGTTGACGTTGGCGT+CGG 0.513585 tig0021446:-78968 Msa1391720:CDS
GCGTCGGATGCGTTGCATGC+TGG 0.516063 tig0021446:-78952 Msa1391720:CDS
GAGATAGTTGTTGCTACGCC+TGG 0.517266 tig0021446:-77805 Msa1391720:CDS
CTTTCTGGTAGAGATATCAT+TGG 0.519087 tig0021446:-78075 Msa1391720:CDS
CATCGTACTCGATGTTATCA+AGG 0.519589 tig0021446:+79211 None:intergenic
GAAAAGGCAAAGGCAGAGGT+GGG 0.521254 tig0021446:-75837 Msa1391720:CDS
GACAGTGGGAGAGGTGGGGA+TGG 0.524042 tig0021446:-77560 Msa1391720:CDS
GACATGCATGTTCATCGCAT+TGG 0.527240 tig0021446:-77199 Msa1391720:CDS
AATACACGAGGAGATGAAAT+CGG 0.527640 tig0021446:-79085 Msa1391720:CDS
GCAAAGTCGAAAAGTTAGCC+AGG 0.529230 tig0021446:-77609 Msa1391720:CDS
TCAAAACGAGATGCAAGAAA+AGG 0.529472 tig0021446:-76036 Msa1391720:CDS
ATTGATCCTTATCACCATGC+AGG 0.531053 tig0021446:+77356 None:intergenic
TTTGGAGCTATGGGTAGTAG+TGG 0.533197 tig0021446:+79519 None:intergenic
TATCAGAGTGACAGTGGGAG+AGG 0.534863 tig0021446:-77569 Msa1391720:CDS
TAAGGATCAATCTTCTCGTA+TGG 0.538960 tig0021446:-77344 Msa1391720:CDS
CAGAAAAGAGCAAGGTTTGG+CGG 0.539484 tig0021446:+77644 None:intergenic
AGAGTGACAGTGGGAGAGGT+GGG 0.542580 tig0021446:-77565 Msa1391720:CDS
AAAGCACAACCGGTAAAGCT+TGG 0.543465 tig0021446:+78094 None:intergenic
GATGAAATTGAAGCACAATT+GGG 0.543605 tig0021446:-77403 Msa1391720:CDS
AAGAGAAAGTTCGGATTCGA+AGG 0.543644 tig0021446:-79345 Msa1391720:CDS
TCATCAACCTCCCAAAATGA+AGG 0.545123 tig0021446:-75649 Msa1391720:CDS
ACTTTCTCCTTCGGCTTCGG+TGG 0.546367 tig0021446:+79057 None:intergenic
ACCGAAGCCGAAGGAGAAAG+TGG 0.547284 tig0021446:-79055 Msa1391720:CDS
ATCAATCAAACCAGCATCCA+CGG 0.550510 tig0021446:+78891 None:intergenic
TCGTGTGCAAGCTCAAGTTA+GGG 0.551061 tig0021446:-79426 Msa1391720:five_prime_UTR
GATGATAACGCTGGTGGTGG+TGG 0.551358 tig0021446:-79153 Msa1391720:CDS
TTACCCGAAATGATTGATCA+AGG 0.552029 tig0021446:-77463 Msa1391720:CDS
CGTTGTCTTCGAAATTGTCG+TGG 0.555230 tig0021446:+79235 None:intergenic
CACTGTCACTCTGATAGGAT+CGG 0.557327 tig0021446:+77576 None:intergenic
AATGCTCAGAGCAACTTACC+TGG 0.557941 tig0021446:-77746 Msa1391720:CDS
GCTACTGATGTTGCCGCTCG+TGG 0.558152 tig0021446:-77277 Msa1391720:CDS
AAAGGCGAAGGCCATCAGGT+TGG 0.560748 tig0021446:-75334 Msa1391720:CDS
CAGAGTGACAGTGGGAGAGG+TGG 0.564403 tig0021446:-77566 Msa1391720:CDS
AACAGGCCGTGCTGGTGACA+AGG 0.564433 tig0021446:-77173 Msa1391720:CDS
AAAAGGCAAAGGCAGAGGTG+GGG 0.567265 tig0021446:-75836 Msa1391720:CDS
GTTGTTGTTCCCACCGCGTA+TGG 0.569328 tig0021446:+79560 None:intergenic
CATTGTTGCAGAAAAGAGCA+AGG 0.570141 tig0021446:+77636 None:intergenic
TGATGTGCCAATTCTCTGGT+AGG 0.570886 tig0021446:+77937 None:intergenic
TCAATCTCAGTATGATCAAG+AGG 0.572016 tig0021446:+78811 None:intergenic
TATTATCAATTGATAGAGCA+TGG 0.572994 tig0021446:-75216 Msa1391720:three_prime_UTR
CGTGTCTCTGCTGTCTATGG+TGG 0.576322 tig0021446:-77871 Msa1391720:CDS
TTTAAAGTTGCTGCCCTGCA+TGG 0.578481 tig0021446:-77370 Msa1391720:CDS
GGTAATTTCTCCAGAAGCCA+CGG 0.578486 tig0021446:+77481 None:intergenic
GGTCCATCGTTGGTCAGATT+AGG 0.580274 tig0021446:-77672 Msa1391720:CDS
CCATTAGATGCATTCATGGA+AGG 0.582173 tig0021446:-79108 Msa1391720:CDS
GTTTGGCTATTCGGGTATCA+GGG 0.582805 tig0021446:-78224 Msa1391720:CDS
GGATCAGCCTGAACTTCAGA+AGG 0.585907 tig0021446:-77989 Msa1391720:CDS
TGATTTAGAGGATGATCCAA+TGG 0.586529 tig0021446:-79016 Msa1391720:CDS
GGCGCCGCCACCGAAGCCGA+AGG 0.588262 tig0021446:-79064 Msa1391720:CDS
TGGGGTCGTACTCATGAAAG+AGG 0.588959 tig0021446:+75086 None:intergenic
AACTTACCTGGTGCTTGATG+AGG 0.590884 tig0021446:-77734 Msa1391720:CDS
TGTTGTGTAGGTGGGAGAAA+AGG 0.593082 tig0021446:-75853 Msa1391720:intron
CAGTTCAAAGAACTCAAGGC+AGG 0.593420 tig0021446:-77832 Msa1391720:CDS
GCAGGTGGCAAAGGTGTGCG+CGG 0.596293 tig0021446:-75811 Msa1391720:CDS
CATCGTTGGTCAGATTAGGC+CGG 0.596590 tig0021446:-77668 Msa1391720:CDS
ACCAGAAACTCGACCATACG+CGG 0.600091 tig0021446:-79573 Msa1391720:five_prime_UTR
AGGATCGGAAAGGATTTCCC+TGG 0.600410 tig0021446:+77591 None:intergenic
TTTACAGCAGCAGACCGACC+TGG 0.602830 tig0021446:+75724 None:intergenic
GCAGTTCTAAACCTAGAGAA+AGG 0.605177 tig0021446:-75352 Msa1391720:intron
ATTCAGTAATAATACAAGCA+TGG 0.605916 tig0021446:-75626 Msa1391720:CDS
AATTAAAAGGATGAAGGTGA+AGG 0.606079 tig0021446:+79598 None:intergenic
GGCCGTGCTGGTGACAAGGA+CGG 0.606801 tig0021446:-77169 Msa1391720:CDS
GTCGTACTCATGAAAGAGGT+AGG 0.607774 tig0021446:+75090 None:intergenic
CTAGCTGGCTTTGTATCTGG+TGG 0.609199 tig0021446:-75583 Msa1391720:CDS
AGCAATATCAAAGTTTACCA+CGG 0.609796 tig0021446:+77231 None:intergenic
GATCAGCCTCATCAAGCACC+AGG 0.611022 tig0021446:+77728 None:intergenic
GGCAATTTCTCAGAATCAGA+AGG 0.613201 tig0021446:+77502 None:intergenic
AGTAGCAATAAGCACATGGT+AGG 0.613217 tig0021446:+77294 None:intergenic
CATCTAACGCAGTTCCAGGT+CGG 0.613656 tig0021446:-75738 Msa1391720:CDS
AACGATGATAACGCTGGTGG+TGG 0.614523 tig0021446:-79156 Msa1391720:CDS
CCTGAACTTCAGAAGGAGGA+AGG 0.614956 tig0021446:-77982 Msa1391720:CDS
TTGATCCTTATCACCATGCA+GGG 0.615126 tig0021446:+77357 None:intergenic
TGAACAGTTCAAAGAACTCA+AGG 0.617345 tig0021446:-77836 Msa1391720:CDS
CTGATTCTGAGAAATTGCCG+TGG 0.618831 tig0021446:-77498 Msa1391720:CDS
AACTATCTATCCCAACCTGA+TGG 0.619017 tig0021446:+75323 None:intergenic
CGATCCTATCAGAGTGACAG+TGG 0.622612 tig0021446:-77575 Msa1391720:CDS
GAAGGATTTAGGGTTGACGT+TGG 0.628406 tig0021446:-78974 Msa1391720:CDS
CGGCCTAATCTGACCAACGA+TGG 0.632293 tig0021446:+77669 None:intergenic
CATCAGTAGCAATAAGCACA+TGG 0.632724 tig0021446:+77290 None:intergenic
CTTGATGTCAAGACCACGAG+CGG 0.633460 tig0021446:+77264 None:intergenic
GGAGGAACGTAAAGACGTTG+AGG 0.634079 tig0021446:+79273 None:intergenic
TTATGCTGCTGCTAAAGCCG+TGG 0.635330 tig0021446:-78908 Msa1391720:CDS
CTCCGTCCTTGTCACCAGCA+CGG 0.638268 tig0021446:+77167 None:intergenic
AAACGAGATGCAAGAAAAGG+AGG 0.638810 tig0021446:-76033 Msa1391720:intron
CAAAGTCGAAAAGTTAGCCA+GGG 0.638925 tig0021446:-77608 Msa1391720:CDS
TGGTGGTGGTGGTTGTGAAG+AGG 0.639489 tig0021446:-79142 Msa1391720:CDS
GTATAGATATTCCAGAGCCA+AGG 0.641050 tig0021446:-75132 Msa1391720:three_prime_UTR
GATACAAAGCCAGCTAGTGT+TGG 0.641121 tig0021446:+75589 None:intergenic
TGCTGGTCAGAATGTGTCCA+CGG 0.644595 tig0021446:-77077 Msa1391720:CDS
TCAGCCTGAACTTCAGAAGG+AGG 0.650481 tig0021446:-77986 Msa1391720:CDS
TCACTCTGATAGGATCGGAA+AGG 0.651428 tig0021446:+77581 None:intergenic
CTAAACCTAGAGAAAGGCGA+AGG 0.655176 tig0021446:-75346 Msa1391720:CDS
TGGATATGATTCTGATGAGG+AGG 0.658341 tig0021446:-78932 Msa1391720:CDS
TGCTTCAATTTCATCCACAG+TGG 0.658468 tig0021446:+77411 None:intergenic
CCGCAAGTAAGGTCCATCGT+TGG 0.658844 tig0021446:-77682 Msa1391720:CDS
AACAACAACGATGATAACGC+TGG 0.659460 tig0021446:-79162 Msa1391720:CDS
CATCAAGTCAATTAAAACCG+TGG 0.659638 tig0021446:-77248 Msa1391720:CDS
CGAAACTATAGGTAGACTGA+CGG 0.661631 tig0021446:+79310 None:intergenic
GGCACATCAGATATATCTCG+AGG 0.663704 tig0021446:-77923 Msa1391720:CDS
GCTTGGCATTGTATAGACGT+CGG 0.665885 tig0021446:+78111 None:intergenic
GAGTGACAGTGGGAGAGGTG+GGG 0.667890 tig0021446:-77564 Msa1391720:CDS
ATGGGTGCTATAAAGAAACA+AGG 0.668755 tig0021446:-78144 Msa1391720:CDS
AGCAAGATCCATCAACTCCG+TGG 0.674249 tig0021446:+77060 None:intergenic
CATACACTTGAGTTTGACAG+CGG 0.680583 tig0021446:+75282 None:intergenic
GATCCTATCAGAGTGACAGT+GGG 0.686740 tig0021446:-77574 Msa1391720:CDS
GAAGCACAATTGGGTCAGAG+AGG 0.693962 tig0021446:-77394 Msa1391720:CDS
GGAACGTAAAGACGTTGAGG+AGG 0.696141 tig0021446:+79276 None:intergenic
TGCTGGATATGATTCTGATG+AGG 0.699809 tig0021446:-78935 Msa1391720:CDS
AACAACGATGATAACGCTGG+TGG 0.703564 tig0021446:-79159 Msa1391720:CDS
CCAACGATGGACCTTACTTG+CGG 0.706917 tig0021446:+77682 None:intergenic
GTAGGTGGGAGAAAAGGCAA+AGG 0.721472 tig0021446:-75847 Msa1391720:intron
ATTCATGGAAGGAATACACG+AGG 0.768621 tig0021446:-79097 Msa1391720:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATATATTAATGTATTCAA+TGG - tig0021446:77880-77899 Msa1391720:CDS 10.0%
!! AACATAAAAATAGAATTTCA+TGG + tig0021446:75983-76002 None:intergenic 15.0%
!!! ATTTTACAGAAATTTAAATC+TGG - tig0021446:77385-77404 Msa1391720:CDS 15.0%
!!! TTAGTACATATTTTTTGAAA+TGG - tig0021446:77857-77876 Msa1391720:CDS 15.0%
!!! AAAAAGAAGGGTTTTAATTT+TGG + tig0021446:75206-75225 None:intergenic 20.0%
!! TTGAGTTTGAATAAAAAGAA+GGG + tig0021446:75218-75237 None:intergenic 20.0%
!! ACACGATAAATAAAATTTGA+GGG + tig0021446:75264-75283 None:intergenic 20.0%
!! TAGATATAAAGATGATTTAG+AGG - tig0021446:75676-75695 Msa1391720:CDS 20.0%
!! TCATAAAAATCCTTGTTAAA+AGG + tig0021446:75926-75945 None:intergenic 20.0%
!!! TTTTAACAAGGATTTTTATG+AGG - tig0021446:75925-75944 Msa1391720:intron 20.0%
!!! TTAAGTTGATTATTCAAACA+GGG + tig0021446:76099-76118 None:intergenic 20.0%
!!! ATTAAGTTGATTATTCAAAC+AGG + tig0021446:76100-76119 None:intergenic 20.0%
!! TGAAGAAAAAATACTGTATA+GGG + tig0021446:77685-77704 None:intergenic 20.0%
!! ATGAAGAAAAAATACTGTAT+AGG + tig0021446:77686-77705 None:intergenic 20.0%
!! TATATTAATGTATTCAATGG+TGG - tig0021446:77883-77902 Msa1391720:CDS 20.0%
!! GATAGAAGTTATATATCTAT+AGG - tig0021446:77948-77967 Msa1391720:CDS 20.0%
!!! ATCTATTTGATTGAACATTT+TGG - tig0021446:78130-78149 Msa1391720:CDS 20.0%
!!! TGAACATTTTGGTAAAATTA+TGG - tig0021446:78141-78160 Msa1391720:CDS 20.0%
!! TAAAGAAGTAAAGCTTATTA+GGG + tig0021446:78385-78404 None:intergenic 20.0%
!! TATAAGATTTAGATATCTCT+TGG - tig0021446:78582-78601 Msa1391720:intron 20.0%
!! ATAAGATTTAGATATCTCTT+GGG - tig0021446:78583-78602 Msa1391720:intron 20.0%
! TGGTTAAATTAAAAGGATGA+AGG + tig0021446:75115-75134 None:intergenic 25.0%
!!! GAGTTTCTGGTTAAATTAAA+AGG + tig0021446:75122-75141 None:intergenic 25.0%
! GTTGAGTTTGAATAAAAAGA+AGG + tig0021446:75219-75238 None:intergenic 25.0%
! ATAAAATTTGAGGGAGATAA+TGG + tig0021446:75255-75274 None:intergenic 25.0%
! CACACGATAAATAAAATTTG+AGG + tig0021446:75265-75284 None:intergenic 25.0%
! GTTAAATTACCTGATATTGA+AGG + tig0021446:75956-75975 None:intergenic 25.0%
!!! TAAGTTGATTATTCAAACAG+GGG + tig0021446:76098-76117 None:intergenic 25.0%
! ATATGCTTTAGCAAATTTCT+TGG + tig0021446:76807-76826 None:intergenic 25.0%
!!! AAGAAATTTGCTAAAGCATA+TGG - tig0021446:76806-76825 Msa1391720:intron 25.0%
!!! ATTAGTTTTTGCTTCCAAAA+AGG - tig0021446:77270-77289 Msa1391720:CDS 25.0%
! CTTTGATATTGCTAAAGATA+TGG - tig0021446:77483-77502 Msa1391720:CDS 25.0%
! TTATAACTCAAAAAGAAGCA+CGG - tig0021446:77572-77591 Msa1391720:CDS 25.0%
! CAAAACCAACAATAATCAAA+GGG + tig0021446:77760-77779 None:intergenic 25.0%
!!! GCTTTTTTCAAAAGATGAAA+TGG - tig0021446:78028-78047 Msa1391720:CDS 25.0%
! TTGGTAAAATTATGGTAGAA+TGG - tig0021446:78149-78168 Msa1391720:CDS 25.0%
!!! TAGAATGGACTTGTTTTTTA+GGG - tig0021446:78164-78183 Msa1391720:CDS 25.0%
! CTAAAATATATTTGACTGCT+TGG - tig0021446:78188-78207 Msa1391720:CDS 25.0%
! GTTTGGATGAGAATAAAATT+AGG - tig0021446:78231-78250 Msa1391720:CDS 25.0%
! CTAAAGAAGTAAAGCTTATT+AGG + tig0021446:78386-78405 None:intergenic 25.0%
!! GGTCGAACTAATATATTTTT+CGG + tig0021446:78415-78434 None:intergenic 25.0%
! TATAGTCATAACAAGTCAAA+TGG + tig0021446:78436-78455 None:intergenic 25.0%
!! ATTACTGAATCCTTCATTTT+GGG + tig0021446:79068-79087 None:intergenic 25.0%
!! TATTACTGAATCCTTCATTT+TGG + tig0021446:79069-79088 None:intergenic 25.0%
! ATTCAGTAATAATACAAGCA+TGG - tig0021446:79078-79097 Msa1391720:CDS 25.0%
! TATTATCAATTGATAGAGCA+TGG - tig0021446:79488-79507 Msa1391720:five_prime_UTR 25.0%
!!! ATTGTATTGAGTACTGAAAA+AGG - tig0021446:79538-79557 Msa1391720:five_prime_UTR 25.0%
AATTAAAAGGATGAAGGTGA+AGG + tig0021446:75109-75128 None:intergenic 30.0%
!!! GGTTTTAATTTTGGAGCTAT+GGG + tig0021446:75197-75216 None:intergenic 30.0%
TTCTTCTTGTCAAGAACAAT+AGG + tig0021446:75857-75876 None:intergenic 30.0%
! TGATTATCAGCCTTTTAACA+AGG - tig0021446:75913-75932 Msa1391720:intron 30.0%
! TGTGTGTTGATATTTCACAT+GGG - tig0021446:76056-76075 Msa1391720:intron 30.0%
!! GTTGTTTTCATAAGCTATCT+TGG - tig0021446:76226-76245 Msa1391720:intron 30.0%
!! ATGTGGACATTAGTTGTTTT+CGG + tig0021446:76270-76289 None:intergenic 30.0%
TATTGAAAGAGCTAATGATG+TGG + tig0021446:76287-76306 None:intergenic 30.0%
AGCAAGATGTAACTGATTAT+AGG - tig0021446:76453-76472 Msa1391720:intron 30.0%
AACTGATTATAGGAAGAGTT+TGG - tig0021446:76463-76482 Msa1391720:intron 30.0%
!!! TCAAATGTTTTTACTGGCTT+AGG + tig0021446:76515-76534 None:intergenic 30.0%
TAAGCCAGTAAAAACATTTG+AGG - tig0021446:76514-76533 Msa1391720:intron 30.0%
TAAAAACATTTGAGGACTGT+GGG - tig0021446:76522-76541 Msa1391720:intron 30.0%
TTTATAGCACCCATAATTTG+TGG + tig0021446:76554-76573 None:intergenic 30.0%
GATAGACATGCTAAAAATGA+AGG - tig0021446:76928-76947 Msa1391720:intron 30.0%
ATCACCTTGATCAATCATTT+CGG + tig0021446:77248-77267 None:intergenic 30.0%
GATGAAATTGAAGCACAATT+GGG - tig0021446:77301-77320 Msa1391720:CDS 30.0%
AGCAATATCAAAGTTTACCA+CGG + tig0021446:77476-77495 None:intergenic 30.0%
CCAAAACCAACAATAATCAA+AGG + tig0021446:77761-77780 None:intergenic 30.0%
!!! CCTTTGATTATTGTTGGTTT+TGG - tig0021446:77758-77777 Msa1391720:CDS 30.0%
! TTTTGCCTGTAAATAGCATA+GGG + tig0021446:77824-77843 None:intergenic 30.0%
! TTTTTGCCTGTAAATAGCAT+AGG + tig0021446:77825-77844 None:intergenic 30.0%
!! TATATCTATAGGTTTGCTGT+TGG - tig0021446:77959-77978 Msa1391720:CDS 30.0%
!!! GTAGAATGGACTTGTTTTTT+AGG - tig0021446:78163-78182 Msa1391720:CDS 30.0%
GTAATATCAGTATGCTTGAT+TGG - tig0021446:78803-78822 Msa1391720:CDS 30.0%
TTACATTTCTTGTGTTGTGT+AGG - tig0021446:78839-78858 Msa1391720:CDS 30.0%
AATTCCACTAGTCAAAATTC+TGG - tig0021446:79211-79230 Msa1391720:CDS 30.0%
GTATGAATGCTCATATTTGT+AGG - tig0021446:79440-79459 Msa1391720:five_prime_UTR 30.0%
!!! GGGTTTTAATTTTGGAGCTA+TGG + tig0021446:75198-75217 None:intergenic 35.0%
!! TGAGGGAGATAATGGAATTT+AGG + tig0021446:75247-75266 None:intergenic 35.0%
GCTTCGAAATTTCACTAAGA+AGG + tig0021446:75310-75329 None:intergenic 35.0%
TTGAGATCGTTCGAAACTAT+AGG + tig0021446:75408-75427 None:intergenic 35.0%
GTTGTTTGATTGTTCTTCTC+TGG + tig0021446:75525-75544 None:intergenic 35.0%
AATACACGAGGAGATGAAAT+CGG - tig0021446:75619-75638 Msa1391720:CDS 35.0%
TGATTTAGAGGATGATCCAA+TGG - tig0021446:75688-75707 Msa1391720:CDS 35.0%
!!! ATCCAATGGAGAGTTTTTTG+AGG - tig0021446:75702-75721 Msa1391720:CDS 35.0%
!!! TCCAATGGAGAGTTTTTTGA+GGG - tig0021446:75703-75722 Msa1391720:CDS 35.0%
TCAATCTCAGTATGATCAAG+AGG + tig0021446:75896-75915 None:intergenic 35.0%
! GTGTGTGTTGATATTTCACA+TGG - tig0021446:76055-76074 Msa1391720:intron 35.0%
! TTATTCAAACAGGGGTGTAA+TGG + tig0021446:76090-76109 None:intergenic 35.0%
TTTCAATAAGCTGTCCCTAA+CGG - tig0021446:76299-76318 Msa1391720:intron 35.0%
CAACTTATAACATAGAGGCT+AGG + tig0021446:76376-76395 None:intergenic 35.0%
GCACTCAACTTATAACATAG+AGG + tig0021446:76381-76400 None:intergenic 35.0%
ATAGGAAGAGTTTGGCTATT+CGG - tig0021446:76471-76490 Msa1391720:intron 35.0%
!! CAGTCCTCAAATGTTTTTAC+TGG + tig0021446:76521-76540 None:intergenic 35.0%
GTAAAAACATTTGAGGACTG+TGG - tig0021446:76521-76540 Msa1391720:intron 35.0%
! ATGGGTGCTATAAAGAAACA+AGG - tig0021446:76560-76579 Msa1391720:intron 35.0%
TATACAATGCCAAGCTTTAC+CGG - tig0021446:76601-76620 Msa1391720:intron 35.0%
! CTTTCTGGTAGAGATATCAT+TGG - tig0021446:76629-76648 Msa1391720:intron 35.0%
TGAACAGTTCAAAGAACTCA+AGG - tig0021446:76868-76887 Msa1391720:intron 35.0%
TTACCCGAAATGATTGATCA+AGG - tig0021446:77241-77260 Msa1391720:CDS 35.0%
TCACCTTGATCAATCATTTC+GGG + tig0021446:77247-77266 None:intergenic 35.0%
GGATGAAATTGAAGCACAAT+TGG - tig0021446:77300-77319 Msa1391720:CDS 35.0%
TAAGGATCAATCTTCTCGTA+TGG - tig0021446:77360-77379 Msa1391720:CDS 35.0%
CATCAAGTCAATTAAAACCG+TGG - tig0021446:77456-77475 Msa1391720:CDS 35.0%
CGTATCCCTTTGATTATTGT+TGG - tig0021446:77752-77771 Msa1391720:CDS 35.0%
AATAGCATAGGGGGATAAAT+GGG + tig0021446:77813-77832 None:intergenic 35.0%
AAATAGCATAGGGGGATAAA+TGG + tig0021446:77814-77833 None:intergenic 35.0%
TTTGCCTGTAAATAGCATAG+GGG + tig0021446:77823-77842 None:intergenic 35.0%
!! AATGTATTCAATGGTGGACA+AGG - tig0021446:77889-77908 Msa1391720:CDS 35.0%
!! AAGGTTAGTTTCTAAGAAGC+TGG - tig0021446:77908-77927 Msa1391720:CDS 35.0%
!! TTTTCTATAGTGCTGCTACT+TGG - tig0021446:78330-78349 Msa1391720:intron 35.0%
! TTTCTATAGTGCTGCTACTT+GGG - tig0021446:78331-78350 Msa1391720:intron 35.0%
! TTATTAGGGAGAGGTTTTTG+TGG + tig0021446:78371-78390 None:intergenic 35.0%
AAGTAAAGCTTATTAGGGAG+AGG + tig0021446:78380-78399 None:intergenic 35.0%
CGTCACAATTCATATGTCAT+TGG - tig0021446:78521-78540 Msa1391720:intron 35.0%
AGATTTAGATATCTCTTGGG+TGG - tig0021446:78586-78605 Msa1391720:intron 35.0%
GATTTAGATATCTCTTGGGT+GGG - tig0021446:78587-78606 Msa1391720:intron 35.0%
! ATTTTGTCTTCTAATTCCGC+AGG - tig0021446:78631-78650 Msa1391720:intron 35.0%
TCAAAACGAGATGCAAGAAA+AGG - tig0021446:78668-78687 Msa1391720:intron 35.0%
ATTTCTTGTGTTGTGTAGGT+GGG - tig0021446:78843-78862 Msa1391720:CDS 35.0%
AACGAAGCTACTCCTAAATT+GGG + tig0021446:79029-79048 None:intergenic 35.0%
! TTTGTATCTGGTGGATCAAT+TGG - tig0021446:79130-79149 Msa1391720:CDS 35.0%
CTAGTGGAATTTACAGTTGA+AGG + tig0021446:79202-79221 None:intergenic 35.0%
!!! TACTCCAGAATTTTGACTAG+TGG + tig0021446:79218-79237 None:intergenic 35.0%
!! CAAAATTCTGGAGTAAATCC+TGG - tig0021446:79223-79242 Msa1391720:CDS 35.0%
GAGATGTCGAAGAGAAAGTT+CGG - tig0021446:75350-75369 Msa1391720:CDS 40.0%
AAGAGAAAGTTCGGATTCGA+AGG - tig0021446:75359-75378 Msa1391720:intron 40.0%
AAGTTCGGATTCGAAGGTTT+CGG - tig0021446:75365-75384 Msa1391720:intron 40.0%
CGAAACTATAGGTAGACTGA+CGG + tig0021446:75397-75416 None:intergenic 40.0%
CATCGTACTCGATGTTATCA+AGG + tig0021446:75496-75515 None:intergenic 40.0%
! AACAACAACGATGATAACGC+TGG - tig0021446:75542-75561 Msa1391720:CDS 40.0%
CGATCCATTAGATGCATTCA+TGG - tig0021446:75592-75611 Msa1391720:CDS 40.0%
CCTTCCATGAATGCATCTAA+TGG + tig0021446:75599-75618 None:intergenic 40.0%
CCATTAGATGCATTCATGGA+AGG - tig0021446:75596-75615 Msa1391720:CDS 40.0%
ATTCATGGAAGGAATACACG+AGG - tig0021446:75607-75626 Msa1391720:CDS 40.0%
CTATCTTCCACTTTCTCCTT+CGG + tig0021446:75659-75678 None:intergenic 40.0%
TGCTGGATATGATTCTGATG+AGG - tig0021446:75769-75788 Msa1391720:CDS 40.0%
TGGATATGATTCTGATGAGG+AGG - tig0021446:75772-75791 Msa1391720:CDS 40.0%
ATCAATCAAACCAGCATCCA+CGG + tig0021446:75816-75835 None:intergenic 40.0%
GTATGATCAAGAGGAGCAAT+AGG + tig0021446:75887-75906 None:intergenic 40.0%
AAGCTATCTTGGAGAGCTTA+TGG - tig0021446:76237-76256 Msa1391720:intron 40.0%
! GTGTTTTGTGTGCTTGATAC+AGG - tig0021446:76422-76441 Msa1391720:intron 40.0%
TAGGAAGAGTTTGGCTATTC+GGG - tig0021446:76472-76491 Msa1391720:intron 40.0%
! TGGGTTTGCTCCACAAATTA+TGG - tig0021446:76541-76560 Msa1391720:intron 40.0%
! GGGTTTGCTCCACAAATTAT+GGG - tig0021446:76542-76561 Msa1391720:intron 40.0%
ATCATTGGCATAGCGAAAAC+TGG - tig0021446:76644-76663 Msa1391720:intron 40.0%
TCCTATGATCGTGCATATCA+TGG - tig0021446:76694-76713 Msa1391720:intron 40.0%
TCCATGATATGCACGATCAT+AGG + tig0021446:76698-76717 None:intergenic 40.0%
TATCTGATGTGCCAATTCTC+TGG + tig0021446:76774-76793 None:intergenic 40.0%
AGCATGTCTATCAATCTTCC+AGG + tig0021446:76920-76939 None:intergenic 40.0%
GCTGATCGAATGTTTGATCT+TGG - tig0021446:76992-77011 Msa1391720:intron 40.0%
TTGCAGAAAAGAGCAAGGTT+TGG + tig0021446:77066-77085 None:intergenic 40.0%
CATTGTTGCAGAAAAGAGCA+AGG + tig0021446:77071-77090 None:intergenic 40.0%
CAAAGTCGAAAAGTTAGCCA+GGG - tig0021446:77096-77115 Msa1391720:CDS 40.0%
GGCAATTTCTCAGAATCAGA+AGG + tig0021446:77205-77224 None:intergenic 40.0%
TGCTTCAATTTCATCCACAG+TGG + tig0021446:77296-77315 None:intergenic 40.0%
TTGATCCTTATCACCATGCA+GGG + tig0021446:77350-77369 None:intergenic 40.0%
ATTGATCCTTATCACCATGC+AGG + tig0021446:77351-77370 None:intergenic 40.0%
AGTAGCAATAAGCACATGGT+AGG + tig0021446:77413-77432 None:intergenic 40.0%
CATCAGTAGCAATAAGCACA+TGG + tig0021446:77417-77436 None:intergenic 40.0%
GTTAATAGCTTAGTTGCTGC+TGG - tig0021446:77610-77629 Msa1391720:CDS 40.0%
! GTTGATGGATCTTGCTATGA+AGG - tig0021446:77651-77670 Msa1391720:CDS 40.0%
! TATCCCCCTATGCTATTTAC+AGG - tig0021446:77816-77835 Msa1391720:CDS 40.0%
TTGCCTGTAAATAGCATAGG+GGG + tig0021446:77822-77841 None:intergenic 40.0%
ATTTAGTCGTTCAGGAAGAC+AGG + tig0021446:78056-78075 None:intergenic 40.0%
TGTCTTCCTGAACGACTAAA+TGG - tig0021446:78055-78074 Msa1391720:CDS 40.0%
GTCTTCCTGAACGACTAAAT+GGG - tig0021446:78056-78075 Msa1391720:CDS 40.0%
CGTGCTTACAGGAAATTGTT+TGG - tig0021446:78214-78233 Msa1391720:CDS 40.0%
ACAGCTCGATTAAAACCAGA+GGG + tig0021446:78291-78310 None:intergenic 40.0%
AACAGCTCGATTAAAACCAG+AGG + tig0021446:78292-78311 None:intergenic 40.0%
! CTGACGATGTTTTATGATGC+TGG - tig0021446:78559-78578 Msa1391720:intron 40.0%
AAACGAGATGCAAGAAAAGG+AGG - tig0021446:78671-78690 Msa1391720:intron 40.0%
CATTTCTTGTGTTGTGTAGG+TGG - tig0021446:78842-78861 Msa1391720:CDS 40.0%
CAGGAATGATGTCCCAATTT+AGG - tig0021446:79014-79033 Msa1391720:CDS 40.0%
CAACGAAGCTACTCCTAAAT+TGG + tig0021446:79030-79049 None:intergenic 40.0%
TCATCAACCTCCCAAAATGA+AGG - tig0021446:79055-79074 Msa1391720:CDS 40.0%
! ACTGAATCCTTCATTTTGGG+AGG + tig0021446:79065-79084 None:intergenic 40.0%
AATAAGAGACCAACACTAGC+TGG - tig0021446:79106-79125 Msa1391720:CDS 40.0%
GAATTTACAGTTGAAGGAGC+AGG + tig0021446:79196-79215 None:intergenic 40.0%
!! GCAGTTCTAAACCTAGAGAA+AGG - tig0021446:79352-79371 Msa1391720:CDS 40.0%
AACTATCTATCCCAACCTGA+TGG + tig0021446:79384-79403 None:intergenic 40.0%
CATACACTTGAGTTTGACAG+CGG + tig0021446:79425-79444 None:intergenic 40.0%
! GGCGAAGTCTTGATTTGATT+TGG - tig0021446:79461-79480 Msa1391720:five_prime_UTR 40.0%
GTATAGATATTCCAGAGCCA+AGG - tig0021446:79572-79591 Msa1391720:five_prime_UTR 40.0%
GAGAGAAAATGTTTGAGCCT+TGG + tig0021446:79592-79611 None:intergenic 40.0%
ATGAAGGTGAAGGCGAGTAT+AGG + tig0021446:75099-75118 None:intergenic 45.0%
! TTTGGAGCTATGGGTAGTAG+TGG + tig0021446:75188-75207 None:intergenic 45.0%
ATCGTGTGCAAGCTCAAGTT+AGG - tig0021446:75277-75296 Msa1391720:three_prime_UTR 45.0%
TCGTGTGCAAGCTCAAGTTA+GGG - tig0021446:75278-75297 Msa1391720:three_prime_UTR 45.0%
! TGGCTTTTACGAGATGAAGG+AGG + tig0021446:75452-75471 None:intergenic 45.0%
! TCGTGGCTTTTACGAGATGA+AGG + tig0021446:75455-75474 None:intergenic 45.0%
CGTTGTCTTCGAAATTGTCG+TGG + tig0021446:75472-75491 None:intergenic 45.0%
! AACAACGATGATAACGCTGG+TGG - tig0021446:75545-75564 Msa1391720:CDS 45.0%
GCCCTCAAAAAACTCTCCAT+TGG + tig0021446:75707-75726 None:intergenic 45.0%
!!! GAGTTTTTTGAGGGCGAAGA+AGG - tig0021446:75712-75731 Msa1391720:CDS 45.0%
TTGAGGGCGAAGAAGGATTT+AGG - tig0021446:75719-75738 Msa1391720:CDS 45.0%
TGAGGGCGAAGAAGGATTTA+GGG - tig0021446:75720-75739 Msa1391720:CDS 45.0%
! GAAGGATTTAGGGTTGACGT+TGG - tig0021446:75730-75749 Msa1391720:CDS 45.0%
GAGGAGTCACCTTCAATATC+AGG - tig0021446:75944-75963 Msa1391720:intron 45.0%
GTTGAGTGCGATTGAACGTT+TGG - tig0021446:76392-76411 Msa1391720:intron 45.0%
AGTTTGGCTATTCGGGTATC+AGG - tig0021446:76479-76498 Msa1391720:intron 45.0%
GTTTGGCTATTCGGGTATCA+GGG - tig0021446:76480-76499 Msa1391720:intron 45.0%
GCTTGGCATTGTATAGACGT+CGG + tig0021446:76596-76615 None:intergenic 45.0%
AAAGCACAACCGGTAAAGCT+TGG + tig0021446:76613-76632 None:intergenic 45.0%
! TCTCTACCAGAAAGCACAAC+CGG + tig0021446:76623-76642 None:intergenic 45.0%
GGTGCACATATCACTCCTAT+AGG + tig0021446:76749-76768 None:intergenic 45.0%
ATGTGCACCTACCAGAGAAT+TGG - tig0021446:76760-76779 Msa1391720:intron 45.0%
TGATGTGCCAATTCTCTGGT+AGG + tig0021446:76770-76789 None:intergenic 45.0%
GGCACATCAGATATATCTCG+AGG - tig0021446:76781-76800 Msa1391720:intron 45.0%
ATACGTGTCTCTGCTGTCTA+TGG - tig0021446:76830-76849 Msa1391720:intron 45.0%
CAGTTCAAAGAACTCAAGGC+AGG - tig0021446:76872-76891 Msa1391720:intron 45.0%
! CATGCTAAAAATGAAGGCGC+TGG - tig0021446:76934-76953 Msa1391720:intron 45.0%
AATGCTCAGAGCAACTTACC+TGG - tig0021446:76958-76977 Msa1391720:intron 45.0%
AACTTACCTGGTGCTTGATG+AGG - tig0021446:76970-76989 Msa1391720:intron 45.0%
TTGGATTTGAGCCGCAAGTA+AGG - tig0021446:77011-77030 Msa1391720:intron 45.0%
CAGAAAAGAGCAAGGTTTGG+CGG + tig0021446:77063-77082 None:intergenic 45.0%
! GCTAACTTTTCGACTTTGCG+AGG + tig0021446:77094-77113 None:intergenic 45.0%
GCAAAGTCGAAAAGTTAGCC+AGG - tig0021446:77095-77114 Msa1391720:CDS 45.0%
TCACTCTGATAGGATCGGAA+AGG + tig0021446:77126-77145 None:intergenic 45.0%
CACTGTCACTCTGATAGGAT+CGG + tig0021446:77131-77150 None:intergenic 45.0%
GATCCTATCAGAGTGACAGT+GGG - tig0021446:77130-77149 Msa1391720:CDS 45.0%
! CTGATTCTGAGAAATTGCCG+TGG - tig0021446:77206-77225 Msa1391720:CDS 45.0%
GGTAATTTCTCCAGAAGCCA+CGG + tig0021446:77226-77245 None:intergenic 45.0%
! TTCATCCACAGTGGCCTTTT+TGG + tig0021446:77287-77306 None:intergenic 45.0%
! TTTAAAGTTGCTGCCCTGCA+TGG - tig0021446:77334-77353 Msa1391720:CDS 45.0%
GACATGCATGTTCATCGCAT+TGG - tig0021446:77505-77524 Msa1391720:CDS 45.0%
GTTCATCGCATTGGAAGAAC+AGG - tig0021446:77514-77533 Msa1391720:CDS 45.0%
! CAAAAAGAAGCACGGTTTGC+TGG - tig0021446:77580-77599 Msa1391720:CDS 45.0%
ATTAAAACCAGAGGGGAGAC+GGG + tig0021446:78283-78302 None:intergenic 45.0%
GATTAAAACCAGAGGGGAGA+CGG + tig0021446:78284-78303 None:intergenic 45.0%
CAGCTCGATTAAAACCAGAG+GGG + tig0021446:78290-78309 None:intergenic 45.0%
!! AGCTGTTGACTCTGTCATTC+TGG - tig0021446:78305-78324 Msa1391720:intron 45.0%
TGTCTTCTAATTCCGCAGGA+CGG - tig0021446:78635-78654 Msa1391720:intron 45.0%
GAGATGCAAGAAAAGGAGGT+AGG - tig0021446:78675-78694 Msa1391720:intron 45.0%
GAGATAAGGACGCAGCTTAT+TGG + tig0021446:78769-78788 None:intergenic 45.0%
GACTCTACTGTGCAGAGATA+AGG + tig0021446:78783-78802 None:intergenic 45.0%
TGTTGTGTAGGTGGGAGAAA+AGG - tig0021446:78851-78870 Msa1391720:CDS 45.0%
!!! GTTGATTTTGGCTTGGGCAT+TGG - tig0021446:78917-78936 Msa1391720:CDS 45.0%
GCTGTAAATTCTCTGCGAAC+AGG - tig0021446:78995-79014 Msa1391720:CDS 45.0%
GATACAAAGCCAGCTAGTGT+TGG + tig0021446:79118-79137 None:intergenic 45.0%
!! ACACTAGCTGGCTTTGTATC+TGG - tig0021446:79118-79137 Msa1391720:CDS 45.0%
! GTATCTGGTGGATCAATTGG+CGG - tig0021446:79133-79152 Msa1391720:CDS 45.0%
CTAAACCTAGAGAAAGGCGA+AGG - tig0021446:79358-79377 Msa1391720:exon 45.0%
AAATGTTTGAGCCTTGGCTC+TGG + tig0021446:79586-79605 None:intergenic 45.0%
GTCGTACTCATGAAAGAGGT+AGG + tig0021446:79617-79636 None:intergenic 45.0%
ACCAGAAACTCGACCATACG+CGG - tig0021446:75131-75150 Msa1391720:three_prime_UTR 50.0%
GGAACGTAAAGACGTTGAGG+AGG + tig0021446:75431-75450 None:intergenic 50.0%
GGAGGAACGTAAAGACGTTG+AGG + tig0021446:75434-75453 None:intergenic 50.0%
! AACGATGATAACGCTGGTGG+TGG - tig0021446:75548-75567 Msa1391720:CDS 50.0%
TCCACTTTCTCCTTCGGCTT+CGG + tig0021446:75653-75672 None:intergenic 50.0%
! TTTAGGGTTGACGTTGGCGT+CGG - tig0021446:75736-75755 Msa1391720:CDS 50.0%
TTATGCTGCTGCTAAAGCCG+TGG - tig0021446:75796-75815 Msa1391720:CDS 50.0%
CGCACACTTGTGAACCGTTA+GGG + tig0021446:76316-76335 None:intergenic 50.0%
! GCTTTACCGGTTGTGCTTTC+TGG - tig0021446:76614-76633 Msa1391720:intron 50.0%
! GGCATAGCGAAAACTGGTTC+TGG - tig0021446:76650-76669 Msa1391720:intron 50.0%
GGATCAGCCTGAACTTCAGA+AGG - tig0021446:76715-76734 Msa1391720:intron 50.0%
TCAGCCTGAACTTCAGAAGG+AGG - tig0021446:76718-76737 Msa1391720:intron 50.0%
!! CCTTCCTCCTTCTGAAGTTC+AGG + tig0021446:76725-76744 None:intergenic 50.0%
CCTGAACTTCAGAAGGAGGA+AGG - tig0021446:76722-76741 Msa1391720:intron 50.0%
CAGAAGGAGGAAGGTCCTAT+AGG - tig0021446:76731-76750 Msa1391720:intron 50.0%
GAGATAGTTGTTGCTACGCC+TGG - tig0021446:76899-76918 Msa1391720:intron 50.0%
CCAACGATGGACCTTACTTG+CGG + tig0021446:77025-77044 None:intergenic 50.0%
GGTCCATCGTTGGTCAGATT+AGG - tig0021446:77032-77051 Msa1391720:intron 50.0%
CATCGTTGGTCAGATTAGGC+CGG - tig0021446:77036-77055 Msa1391720:intron 50.0%
AGGATCGGAAAGGATTTCCC+TGG + tig0021446:77116-77135 None:intergenic 50.0%
CGATCCTATCAGAGTGACAG+TGG - tig0021446:77129-77148 Msa1391720:CDS 50.0%
TCTCCCACTGTCACTCTGAT+AGG + tig0021446:77136-77155 None:intergenic 50.0%
TATCAGAGTGACAGTGGGAG+AGG - tig0021446:77135-77154 Msa1391720:CDS 50.0%
TGAGAAATTGCCGTGGCTTC+TGG - tig0021446:77213-77232 Msa1391720:CDS 50.0%
TGCTTCCAAAAAGGCCACTG+TGG - tig0021446:77279-77298 Msa1391720:CDS 50.0%
GAAGCACAATTGGGTCAGAG+AGG - tig0021446:77310-77329 Msa1391720:CDS 50.0%
CTTGATGTCAAGACCACGAG+CGG + tig0021446:77443-77462 None:intergenic 50.0%
!! AGCACGGTTTGCTGGTGAAT+TGG - tig0021446:77588-77607 Msa1391720:CDS 50.0%
TGCTGGTCAGAATGTGTCCA+CGG - tig0021446:77627-77646 Msa1391720:CDS 50.0%
GAATGTGTCCACGGAGTTGA+TGG - tig0021446:77636-77655 Msa1391720:CDS 50.0%
AGCAAGATCCATCAACTCCG+TGG + tig0021446:77647-77666 None:intergenic 50.0%
CACAGCCCATTTAGTCGTTC+AGG + tig0021446:78064-78083 None:intergenic 50.0%
CTGCTTGGTTTCGTGCTTAC+AGG - tig0021446:78203-78222 Msa1391720:CDS 50.0%
GTCTTCTAATTCCGCAGGAC+GGG - tig0021446:78636-78655 Msa1391720:intron 50.0%
GTAGGTGGGAGAAAAGGCAA+AGG - tig0021446:78857-78876 Msa1391720:CDS 50.0%
AGAAAAGGCAAAGGCAGAGG+TGG - tig0021446:78866-78885 Msa1391720:CDS 50.0%
GAAAAGGCAAAGGCAGAGGT+GGG - tig0021446:78867-78886 Msa1391720:CDS 50.0%
AAAAGGCAAAGGCAGAGGTG+GGG - tig0021446:78868-78887 Msa1391720:CDS 50.0%
!!! CGCGGAGTTGATTTTGGCTT+GGG - tig0021446:78911-78930 Msa1391720:CDS 50.0%
CATCTAACGCAGTTCCAGGT+CGG - tig0021446:78966-78985 Msa1391720:CDS 50.0%
!! CTAGCTGGCTTTGTATCTGG+TGG - tig0021446:79121-79140 Msa1391720:CDS 50.0%
! CTGTTCGTGTTGTTCTGACC+AGG + tig0021446:79244-79263 None:intergenic 50.0%
CTGGTCAGAACAACACGAAC+AGG - tig0021446:79242-79261 Msa1391720:CDS 50.0%
ACCGCGTATGGTCGAGTTTC+TGG + tig0021446:75135-75154 None:intergenic 55.0%
AGAAACTCGACCATACGCGG+TGG - tig0021446:75134-75153 Msa1391720:three_prime_UTR 55.0%
GAAACTCGACCATACGCGGT+GGG - tig0021446:75135-75154 Msa1391720:three_prime_UTR 55.0%
! GTTGTTGTTCCCACCGCGTA+TGG + tig0021446:75147-75166 None:intergenic 55.0%
!! GATGATAACGCTGGTGGTGG+TGG - tig0021446:75551-75570 Msa1391720:CDS 55.0%
!! TGGTGGTGGTGGTTGTGAAG+AGG - tig0021446:75562-75581 Msa1391720:CDS 55.0%
ACTTTCTCCTTCGGCTTCGG+TGG + tig0021446:75650-75669 None:intergenic 55.0%
ACCGAAGCCGAAGGAGAAAG+TGG - tig0021446:75649-75668 Msa1391720:CDS 55.0%
GCGCACACTTGTGAACCGTT+AGG + tig0021446:76317-76336 None:intergenic 55.0%
TCACAAGTGTGCGCTTGCGT+CGG - tig0021446:76323-76342 Msa1391720:intron 55.0%
CGTGTCTCTGCTGTCTATGG+TGG - tig0021446:76833-76852 Msa1391720:intron 55.0%
GATCAGCCTCATCAAGCACC+AGG + tig0021446:76979-76998 None:intergenic 55.0%
CCGCAAGTAAGGTCCATCGT+TGG - tig0021446:77022-77041 Msa1391720:intron 55.0%
CGGCCTAATCTGACCAACGA+TGG + tig0021446:77038-77057 None:intergenic 55.0%
AAGAGCAAGGTTTGGCGGTC+CGG + tig0021446:77058-77077 None:intergenic 55.0%
AGAGTGACAGTGGGAGAGGT+GGG - tig0021446:77139-77158 Msa1391720:CDS 55.0%
TGCTGCCCTGCATGGTGATA+AGG - tig0021446:77342-77361 Msa1391720:CDS 55.0%
ATTGGAAGAACAGGCCGTGC+TGG - tig0021446:77523-77542 Msa1391720:CDS 55.0%
AATAAGTCCCGTCTCCCCTC+TGG - tig0021446:78273-78292 Msa1391720:intron 55.0%
GGGAGAAAAGGCAAAGGCAG+AGG - tig0021446:78863-78882 Msa1391720:CDS 55.0%
AAAGGCAAAGGCAGAGGTGG+GGG - tig0021446:78869-78888 Msa1391720:CDS 55.0%
!! GGTGTGCGCGGAGTTGATTT+TGG - tig0021446:78905-78924 Msa1391720:CDS 55.0%
!!! GCGCGGAGTTGATTTTGGCT+TGG - tig0021446:78910-78929 Msa1391720:CDS 55.0%
GCGTCATCTAACGCAGTTCC+AGG - tig0021446:78962-78981 Msa1391720:CDS 55.0%
TTTACAGCAGCAGACCGACC+TGG + tig0021446:78983-79002 None:intergenic 55.0%
GATGGCCTTCGCCTTTCTCT+AGG + tig0021446:79366-79385 None:intergenic 55.0%
AGAGAAAGGCGAAGGCCATC+AGG - tig0021446:79366-79385 Msa1391720:exon 55.0%
AAAGGCGAAGGCCATCAGGT+TGG - tig0021446:79370-79389 Msa1391720:exon 55.0%
AAGGCGAAGGCCATCAGGTT+GGG - tig0021446:79371-79390 Msa1391720:exon 55.0%
TTCTCCTTCGGCTTCGGTGG+CGG + tig0021446:75647-75666 None:intergenic 60.0%
GCTGCTAAAGCCGTGGATGC+TGG - tig0021446:75803-75822 Msa1391720:CDS 60.0%
CAGAGTGACAGTGGGAGAGG+TGG - tig0021446:77138-77157 Msa1391720:CDS 60.0%
GAGTGACAGTGGGAGAGGTG+GGG - tig0021446:77140-77159 Msa1391720:CDS 60.0%
GCTACTGATGTTGCCGCTCG+TGG - tig0021446:77427-77446 Msa1391720:CDS 60.0%
! AACAGGCCGTGCTGGTGACA+AGG - tig0021446:77531-77550 Msa1391720:CDS 60.0%
CTCCGTCCTTGTCACCAGCA+CGG + tig0021446:77540-77559 None:intergenic 60.0%
TTCCGCAGGACGGGAGATTC+AGG - tig0021446:78645-78664 Msa1391720:intron 60.0%
GACCTGAATCTCCCGTCCTG+CGG + tig0021446:78650-78669 None:intergenic 60.0%
GCGTCGGATGCGTTGCATGC+TGG - tig0021446:75752-75771 Msa1391720:CDS 65.0%
GACAGTGGGAGAGGTGGGGA+TGG - tig0021446:77144-77163 Msa1391720:CDS 65.0%
! GGCCGTGCTGGTGACAAGGA+CGG - tig0021446:77535-77554 Msa1391720:CDS 65.0%
! AAAGGCAGAGGTGGGGGTGC+AGG - tig0021446:78875-78894 Msa1391720:CDS 65.0%
! GCAGGTGGCAAAGGTGTGCG+CGG - tig0021446:78893-78912 Msa1391720:CDS 65.0%
! GGTGGGGGTGCAGGTGGCAA+AGG - tig0021446:78884-78903 Msa1391720:CDS 70.0%
! GGCAGAGGTGGGGGTGCAGG+TGG - tig0021446:78878-78897 Msa1391720:CDS 75.0%
! GGCGCCGCCACCGAAGCCGA+AGG - tig0021446:75640-75659 Msa1391720:CDS 80.0%
Chromosome Type Strat End Strand Name
tig0021446 gene 75089 79637 75089 ID=Msa1391720;Name=Msa1391720
tig0021446 mRNA 75089 79637 75089 ID=Msa1391720-mRNA-1;Parent=Msa1391720;Name=Msa1391720-mRNA-1;_AED=0.05;_eAED=0.05;_QI=264|1|1|1|1|1|5|236|776
tig0021446 exon 75089 75370 75089 ID=Msa1391720-mRNA-1:exon:12840;Parent=Msa1391720-mRNA-1
tig0021446 exon 75463 75865 75463 ID=Msa1391720-mRNA-1:exon:12839;Parent=Msa1391720-mRNA-1
tig0021446 exon 76034 76073 76034 ID=Msa1391720-mRNA-1:exon:12838;Parent=Msa1391720-mRNA-1
tig0021446 exon 77054 78282 77054 ID=Msa1391720-mRNA-1:exon:12837;Parent=Msa1391720-mRNA-1
tig0021446 exon 78761 79637 78761 ID=Msa1391720-mRNA-1:exon:12836;Parent=Msa1391720-mRNA-1
tig0021446 five_prime_UTR 79374 79637 79374 ID=Msa1391720-mRNA-1:five_prime_utr;Parent=Msa1391720-mRNA-1
tig0021446 CDS 78761 79373 78761 ID=Msa1391720-mRNA-1:cds;Parent=Msa1391720-mRNA-1
tig0021446 CDS 77054 78282 77054 ID=Msa1391720-mRNA-1:cds;Parent=Msa1391720-mRNA-1
tig0021446 CDS 76034 76073 76034 ID=Msa1391720-mRNA-1:cds;Parent=Msa1391720-mRNA-1
tig0021446 CDS 75463 75865 75463 ID=Msa1391720-mRNA-1:cds;Parent=Msa1391720-mRNA-1
tig0021446 CDS 75325 75370 75325 ID=Msa1391720-mRNA-1:cds;Parent=Msa1391720-mRNA-1
tig0021446 three_prime_UTR 75089 75324 75089 ID=Msa1391720-mRNA-1:three_prime_utr;Parent=Msa1391720-mRNA-1
Gene Sequence

>Msa1391720

ATGTCGAAGAGAAAGTTCGGATTCGAAGGTTTCGGCATAAACCGTCAGTCTACCTATAGTTTCGAACGATCTCAACCTCCTCAACGTCTTTACGTTCCTCCTTCATCTCGTAAAAGCCACGACAATTTCGAAGACAACGACCTTGATAACATCGAGTACGATGATGATTCCAGAGAAGAACAATCAAACAACAACAACGATGATAACGCTGGTGGTGGTGGTTGTGAAGAGGATGAAATCGATCCATTAGATGCATTCATGGAAGGAATACACGAGGAGATGAAATCGGCGCCGCCACCGAAGCCGAAGGAGAAAGTGGAAGATAGATATAAAGATGATTTAGAGGATGATCCAATGGAGAGTTTTTTGAGGGCGAAGAAGGATTTAGGGTTGACGTTGGCGTCGGATGCGTTGCATGCTGGATATGATTCTGATGAGGAGGTTTATGCTGCTGCTAAAGCCGTGGATGCTGGTTTGATTGATTATGATTCTGATGATAATCCTATTGTTCTTGACAAGAAGAAAATCGAACCTATTGCTCCTCTTGATCATACTGAGATTGATTATCAGCCTTTTAACAAGGATTTTTATGAGGAGTCACCTTCAATATCAGGTATGAGTGAGCAAGATGTAACTGATTATAGGAAGAGTTTGGCTATTCGGGTATCAGGGTTTGAAGTTCCTAAGCCAGTAAAAACATTTGAGGACTGTGGGTTTGCTCCACAAATTATGGGTGCTATAAAGAAACAAGGTTATGAGAAGCCGACGTCTATACAATGCCAAGCTTTACCGGTTGTGCTTTCTGGTAGAGATATCATTGGCATAGCGAAAACTGGTTCTGGTAAAACTGCTGCTTTTGTGCTTCCTATGATCGTGCATATCATGGATCAGCCTGAACTTCAGAAGGAGGAAGGTCCTATAGGAGTGATATGTGCACCTACCAGAGAATTGGCACATCAGATATATCTCGAGGCCAAGAAATTTGCTAAAGCATATGGAATACGTGTCTCTGCTGTCTATGGTGGAATGTCAAAACTTGAACAGTTCAAAGAACTCAAGGCAGGCTGTGAGATAGTTGTTGCTACGCCTGGAAGATTGATAGACATGCTAAAAATGAAGGCGCTGGCAATGCTCAGAGCAACTTACCTGGTGCTTGATGAGGCTGATCGAATGTTTGATCTTGGATTTGAGCCGCAAGTAAGGTCCATCGTTGGTCAGATTAGGCCGGACCGCCAAACCTTGCTCTTTTCTGCAACAATGCCTCGCAAAGTCGAAAAGTTAGCCAGGGAAATCCTTTCCGATCCTATCAGAGTGACAGTGGGAGAGGTGGGGATGGCAAATGAAGATATTACTCAAGTTGTTCAAGTAATTCCTTCTGATTCTGAGAAATTGCCGTGGCTTCTGGAGAAATTACCCGAAATGATTGATCAAGGTGATACATTAGTTTTTGCTTCCAAAAAGGCCACTGTGGATGAAATTGAAGCACAATTGGGTCAGAGAGGCTTTAAAGTTGCTGCCCTGCATGGTGATAAGGATCAATCTTCTCGTATGGATATTTTACAGAAATTTAAATCTGGCACCTACCATGTGCTTATTGCTACTGATGTTGCCGCTCGTGGTCTTGACATCAAGTCAATTAAAACCGTGGTAAACTTTGATATTGCTAAAGATATGGACATGCATGTTCATCGCATTGGAAGAACAGGCCGTGCTGGTGACAAGGACGGAGTTGCATACACTCTTATAACTCAAAAAGAAGCACGGTTTGCTGGTGAATTGGTTAATAGCTTAGTTGCTGCTGGTCAGAATGTGTCCACGGAGTTGATGGATCTTGCTATGAAGGACGGGAGATTCAGGTCAAAACGAGATGCAAGAAAAGGAGGTGGGAGAAAAGGCAAAGGCAGAGGTGGGGGTGCAGGTGGCAAAGGTGTGCGCGGAGTTGATTTTGGCTTGGGCATTGGATATAGTACAGAGTCAAACAATGCGTCATCTAACGCAGTTCCAGGTCGGTCTGCTGCTGTAAATTCTCTGCGAACAGGAATGATGTCCCAATTTAGGAGTAGCTTCGTTGCTGCATCATCAACCTCCCAAAATGAAGGATTCAGTAATAATACAAGCATGGCTGTTAATAAGAGACCAACACTAGCTGGCTTTGTATCTGGTGGATCAATTGGCGGCGATATAAATACTCATCAGCAAACTGCTTCATACAATCCTGCTCCTTCAACTGTAAATTCCACTAGTCAAAATTCTGGAGTAAATCCTGGTCAGAACAACACGAACAGTTCTAAACCTAGAGAAAGGCGAAGGCCATCAGGTTGGGATAGATAG

Protein sequence

>Msa1391720

MSKRKFGFEGFGINRQSTYSFERSQPPQRLYVPPSSRKSHDNFEDNDLDNIEYDDDSREEQSNNNNDDNAGGGGCEEDEIDPLDAFMEGIHEEMKSAPPPKPKEKVEDRYKDDLEDDPMESFLRAKKDLGLTLASDALHAGYDSDEEVYAAAKAVDAGLIDYDSDDNPIVLDKKKIEPIAPLDHTEIDYQPFNKDFYEESPSISGMSEQDVTDYRKSLAIRVSGFEVPKPVKTFEDCGFAPQIMGAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVICAPTRELAHQIYLEAKKFAKAYGIRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDMLKMKALAMLRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTLLFSATMPRKVEKLAREILSDPIRVTVGEVGMANEDITQVVQVIPSDSEKLPWLLEKLPEMIDQGDTLVFASKKATVDEIEAQLGQRGFKVAALHGDKDQSSRMDILQKFKSGTYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKDGVAYTLITQKEARFAGELVNSLVAAGQNVSTELMDLAMKDGRFRSKRDARKGGGRKGKGRGGGAGGKGVRGVDFGLGIGYSTESNNASSNAVPGRSAAVNSLRTGMMSQFRSSFVAASSTSQNEGFSNNTSMAVNKRPTLAGFVSGGSIGGDINTHQQTASYNPAPSTVNSTSQNSGVNPGQNNTNSSKPRERRRPSGWDR*