AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1133590

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1133590 MtrunA17_Chr7g0260601 97.009 702 20 1 1 702 1 701 0.0 1413
Msa1133590 MtrunA17_Chr4g0031821 72.429 700 141 7 2 689 107 766 0.0 984
Msa1133590 MtrunA17_Chr7g0248361 70.546 696 144 9 1 689 1 642 0.0 945
Msa1133590 MtrunA17_Chr6g0476861 70.864 683 140 7 14 689 16 646 0.0 936
Msa1133590 MtrunA17_Chr3g0094871 81.081 444 68 3 241 683 11 439 0.0 728
Msa1133590 MtrunA17_Chr1g0168321 70.968 465 95 2 157 621 83 507 0.0 662
Msa1133590 MtrunA17_Chr1g0168321 50.000 110 39 3 1 107 1 97 3.28e-18 88.6
Msa1133590 MtrunA17_Chr3g0143721 50.000 452 210 6 241 680 249 696 6.56e-147 444
Msa1133590 MtrunA17_Chr2g0297281 48.330 449 217 9 241 680 286 728 2.96e-135 416
Msa1133590 MtrunA17_Chr4g0052411 48.222 450 217 9 241 680 229 672 5.99e-134 410
Msa1133590 MtrunA17_Chr7g0217421 53.022 364 163 6 232 592 30 388 4.05e-126 380
Msa1133590 MtrunA17_Chr5g0429571 43.579 475 247 8 192 651 269 737 7.90e-115 363
Msa1133590 MtrunA17_Chr1g0158881 43.043 460 234 8 238 691 326 763 9.18e-112 355
Msa1133590 MtrunA17_Chr3g0135721 43.274 446 233 8 232 671 215 646 1.29e-110 350
Msa1133590 MtrunA17_Chr3g0104211 48.549 379 186 4 241 611 304 681 3.98e-110 351
Msa1133590 MtrunA17_Chr3g0135761 43.807 436 223 9 243 671 224 644 1.80e-108 344
Msa1133590 MtrunA17_Chr8g0362771 40.347 461 252 8 220 671 214 660 3.61e-107 342
Msa1133590 MtrunA17_Chr5g0432631 41.741 448 240 8 231 671 219 652 2.87e-105 340
Msa1133590 MtrunA17_Chr5g0432641 39.588 437 241 9 243 671 193 614 1.30e-91 298
Msa1133590 MtrunA17_Chr6g0456351 46.178 314 153 4 191 503 277 575 1.23e-83 276
Msa1133590 MtrunA17_Chr2g0331161 38.427 445 254 7 241 680 415 844 4.38e-80 273
Msa1133590 MtrunA17_Chr8g0388371 41.257 366 189 6 236 582 399 757 6.53e-76 262
Msa1133590 MtrunA17_Chr3g0129971 31.652 575 329 17 166 700 198 748 1.01e-66 235
Msa1133590 MtrunA17_Chr4g0050561 40.684 263 141 3 246 501 161 415 8.70e-58 201
Msa1133590 MtrunA17_Chr8g0392981 79.832 119 24 0 563 681 1 119 4.18e-57 189
Msa1133590 MtrunA17_Chr8g0345461 40.520 269 152 4 228 493 152 415 7.65e-57 199
Msa1133590 MtrunA17_Chr8g0392971 85.294 102 15 0 453 554 51 152 4.36e-55 185
Msa1133590 MtrunA17_Chr3g0135781 53.488 172 76 2 232 403 46 213 1.56e-54 186
Msa1133590 MtrunA17_Chr1g0200081 40.149 269 152 5 228 493 162 424 1.79e-54 193
Msa1133590 MtrunA17_Chr1g0182711 42.972 249 134 4 243 488 190 433 1.22e-52 188
Msa1133590 MtrunA17_Chr7g0262801 42.972 249 134 4 243 488 189 432 4.31e-52 187
Msa1133590 MtrunA17_Chr3g0145011 41.129 248 142 3 241 487 139 383 1.08e-51 184
Msa1133590 MtrunA17_Chr1g0192151 39.286 252 145 4 236 484 162 408 2.59e-51 184
Msa1133590 MtrunA17_Chr4g0014731 39.592 245 140 4 243 484 170 409 3.08e-51 184
Msa1133590 MtrunA17_Chr3g0141901 40.726 248 143 3 241 487 136 380 4.30e-51 182
Msa1133590 MtrunA17_Chr8g0357301 30.022 453 266 12 258 668 487 930 7.26e-51 191
Msa1133590 MtrunA17_Chr7g0255721 39.114 271 151 6 240 503 684 947 2.00e-49 186
Msa1133590 MtrunA17_Chr7g0255721 41.206 199 110 4 272 469 416 608 2.79e-30 127
Msa1133590 MtrunA17_Chr2g0327121 42.000 250 135 5 222 469 189 430 4.79e-49 184
Msa1133590 MtrunA17_Chr2g0327121 41.739 230 130 3 241 469 480 706 5.73e-47 178
Msa1133590 MtrunA17_Chr1g0180791 42.609 230 128 3 241 469 478 704 5.05e-49 184
Msa1133590 MtrunA17_Chr1g0180791 39.716 282 143 7 222 484 187 460 3.26e-48 182
Msa1133590 MtrunA17_Chr7g0264521 42.544 228 127 3 243 469 481 705 2.06e-48 182
Msa1133590 MtrunA17_Chr7g0264521 41.365 249 138 5 222 469 188 429 9.13e-47 177
Msa1133590 MtrunA17_Chr7g0255641 37.545 277 159 6 240 509 657 926 5.50e-48 182
Msa1133590 MtrunA17_Chr7g0255641 40.000 195 108 6 279 472 432 618 2.12e-28 122
Msa1133590 MtrunA17_Chr5g0432391 33.154 371 217 10 312 671 72 422 6.39e-47 172
Msa1133590 MtrunA17_Chr7g0255651 40.948 232 131 4 240 469 281 508 1.43e-46 174
Msa1133590 MtrunA17_Chr7g0255651 30.317 221 143 4 254 469 27 241 1.34e-18 90.1
Msa1133590 MtrunA17_Chr3g0108321 45.876 194 99 3 238 428 156 346 2.98e-46 168
Msa1133590 MtrunA17_Chr2g0277831 41.991 231 124 3 243 469 245 469 5.27e-43 166
Msa1133590 MtrunA17_Chr2g0277831 39.474 228 133 2 241 467 533 756 2.52e-42 164
Msa1133590 MtrunA17_Chr7g0255691 39.344 244 139 5 240 479 285 523 5.34e-43 164
Msa1133590 MtrunA17_Chr7g0255691 36.100 241 131 8 246 474 22 251 5.71e-26 112
Msa1133590 MtrunA17_Chr7g0255901 35.498 231 144 4 241 469 639 866 7.52e-39 154
Msa1133590 MtrunA17_Chr2g0321241 41.850 227 118 8 238 460 129 345 8.43e-38 146
Msa1133590 MtrunA17_Chr4g0026631 41.410 227 119 8 238 460 124 340 8.50e-38 146
Msa1133590 MtrunA17_Chr3g0086411 35.165 273 147 6 241 487 215 483 9.33e-37 144
Msa1133590 MtrunA17_Chr3g0086411 35.333 150 80 3 328 467 7 149 7.71e-17 84.0
Msa1133590 MtrunA17_Chr8g0387641 36.638 232 137 5 241 469 521 745 2.79e-36 146
Msa1133590 MtrunA17_Chr4g0038101 37.281 228 132 6 241 464 721 941 2.91e-36 146
Msa1133590 MtrunA17_Chr4g0033451 36.719 256 147 6 241 487 380 629 8.01e-36 145
Msa1133590 MtrunA17_Chr2g0327231 43.827 162 89 2 241 401 346 506 1.86e-35 140
Msa1133590 MtrunA17_Chr2g0327231 36.111 108 65 2 222 329 135 238 1.59e-12 70.5
Msa1133590 MtrunA17_Chr1g0190401 40.000 200 116 3 227 424 663 860 3.05e-35 144
Msa1133590 MtrunA17_Chr4g0004121 38.431 255 132 8 241 482 242 484 4.21e-35 140
Msa1133590 MtrunA17_Chr3g0086401 34.564 298 153 7 241 510 385 668 6.56e-35 141
Msa1133590 MtrunA17_Chr3g0086401 37.339 233 129 6 234 456 84 309 1.25e-32 134
Msa1133590 MtrunA17_Chr4g0043381 34.513 226 141 3 243 467 839 1058 9.78e-35 142
Msa1133590 MtrunA17_Chr6g0462581 37.069 232 135 6 241 469 500 723 2.13e-34 140
Msa1133590 MtrunA17_Chr3g0127401 37.395 238 127 8 241 469 81 305 1.47e-33 132
Msa1133590 MtrunA17_Chr1g0202381 36.245 229 134 6 240 464 467 687 2.01e-33 137
Msa1133590 MtrunA17_Chr1g0202371 36.842 228 131 7 241 464 397 615 2.96e-33 136
Msa1133590 MtrunA17_Chr5g0397121 35.345 232 140 6 241 469 513 737 4.92e-33 136
Msa1133590 MtrunA17_Chr2g0316851 34.766 256 154 6 222 469 573 823 5.80e-33 137
Msa1133590 MtrunA17_Chr3g0127431 35.983 239 129 8 241 469 84 308 6.65e-33 131
Msa1133590 MtrunA17_Chr1g0204031 36.325 234 137 7 240 469 556 781 7.32e-33 135
Msa1133590 MtrunA17_Chr4g0052271 38.528 231 133 7 241 469 119 342 1.14e-32 130
Msa1133590 MtrunA17_Chr1g0195731 36.481 233 137 6 241 469 934 1159 8.34e-32 133
Msa1133590 MtrunA17_Chr3g0135791 32.599 227 145 4 448 671 19 240 1.02e-31 125
Msa1133590 MtrunA17_Chr1g0195741 36.481 233 137 6 241 469 938 1163 1.67e-31 132
Msa1133590 MtrunA17_Chr3g0116131 35.965 228 135 6 241 464 902 1122 1.95e-30 128
Msa1133590 MtrunA17_Chr6g0459561 36.864 236 137 8 233 465 376 602 2.57e-29 124
Msa1133590 MtrunA17_Chr7g0246111 35.146 239 140 7 236 469 207 435 4.51e-29 122
Msa1133590 MtrunA17_Chr4g0047411 37.915 211 116 5 266 464 202 409 1.34e-28 122
Msa1133590 MtrunA17_Chr6g0459541 31.071 280 157 8 216 465 14 287 5.55e-27 112
Msa1133590 MtrunA17_Chr2g0289231 32.083 240 136 7 237 463 293 518 1.06e-22 102
Msa1133590 MtrunA17_Chr6g0459551 36.082 194 104 7 236 423 97 276 1.68e-21 97.8
Msa1133590 MtrunA17_Chr3g0135741 35.714 126 79 2 444 568 13 137 7.99e-17 77.8
Msa1133590 MtrunA17_Chr5g0432671 44.231 104 51 4 444 546 3 100 1.40e-15 73.2
Msa1133590 MtrunA17_Chr6g0459531 26.962 293 165 12 187 465 3 260 1.46e-14 75.5
Msa1133590 MtrunA17_Chr8g0372701 34.010 197 112 9 243 432 224 409 5.58e-13 72.0
Msa1133590 MtrunA17_Chr4g0062081 42.308 78 43 2 244 319 10 87 5.58e-13 65.5
Msa1133590 MtrunA17_Chr2g0315911 29.843 191 121 5 243 428 206 388 5.98e-13 71.6
Msa1133590 MtrunA17_Chr2g0315971 30.994 171 106 5 262 428 217 379 2.20e-12 70.5
Msa1133590 MtrunA17_Chr5g0404651 32.474 194 112 8 243 428 216 398 9.51e-12 68.2
Msa1133590 MtrunA17_Chr2g0315991 27.749 191 125 5 243 428 199 381 1.56e-11 67.4
Msa1133590 MtrunA17_Chr6g0452361 32.121 165 97 6 253 410 6 162 6.46e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1133590 AT1G07510.1 73.556 658 135 4 46 690 140 771 0.0 964
Msa1133590 AT2G29080.1 69.900 701 160 6 7 689 99 766 0.0 945
Msa1133590 AT1G50250.1 49.558 452 212 6 241 680 259 706 1.65e-145 441
Msa1133590 AT5G42270.1 49.779 452 211 6 241 680 247 694 1.34e-144 439
Msa1133590 AT5G15250.1 48.626 473 226 11 218 680 199 664 8.18e-137 418
Msa1133590 AT2G30950.4 48.998 449 214 9 241 680 228 670 3.04e-135 414
Msa1133590 AT2G30950.1 48.998 449 214 9 241 680 224 666 3.86e-135 414
Msa1133590 AT2G30950.2 48.998 449 214 9 241 680 224 666 3.86e-135 414
Msa1133590 AT2G30950.3 48.998 449 214 9 241 680 224 666 3.86e-135 414
Msa1133590 AT1G06430.1 48.775 449 215 9 241 680 217 659 1.34e-134 412
Msa1133590 AT1G06430.3 48.775 449 215 9 241 680 217 659 1.34e-134 412
Msa1133590 AT1G06430.2 48.775 449 215 9 241 680 217 659 1.34e-134 412
Msa1133590 AT5G53170.1 44.843 446 226 6 238 680 356 784 1.17e-116 369
Msa1133590 AT2G26140.1 44.907 432 224 6 243 671 226 646 1.21e-116 367
Msa1133590 AT5G58870.1 48.662 411 195 6 241 638 326 733 1.09e-113 361
Msa1133590 AT3G47060.1 47.017 419 209 6 226 633 308 724 3.25e-113 360
Msa1133590 AT5G15250.2 50.779 321 130 5 218 515 199 514 1.67e-99 315
Msa1133590 AT3G02450.1 46.057 317 153 4 184 494 276 580 3.54e-83 276
Msa1133590 AT4G23940.1 41.689 367 192 5 236 585 422 783 1.87e-76 265
Msa1133590 AT3G16290.1 36.364 451 255 9 241 680 407 836 2.57e-75 260
Msa1133590 AT5G64580.1 43.421 304 164 4 224 520 296 598 3.15e-64 229
Msa1133590 AT5G19990.2 40.377 265 143 3 246 503 105 361 1.12e-57 200
Msa1133590 AT5G19990.1 40.684 263 141 3 246 501 163 417 3.25e-57 200
Msa1133590 AT5G19990.3 40.684 263 141 3 246 501 163 417 3.25e-57 200
Msa1133590 AT5G20000.1 40.684 263 141 3 246 501 163 417 4.89e-57 200
Msa1133590 AT1G53750.1 40.520 269 152 4 228 493 152 415 1.46e-56 199
Msa1133590 AT1G53780.1 39.326 267 158 3 228 493 324 587 1.89e-54 197
Msa1133590 AT1G53780.4 39.326 267 158 3 228 493 324 587 1.89e-54 197
Msa1133590 AT1G53780.3 39.326 267 158 3 228 493 323 586 2.07e-54 197
Msa1133590 AT1G53780.2 39.326 267 158 3 228 493 345 608 2.38e-54 197
Msa1133590 AT1G79560.1 28.433 517 305 16 237 701 486 989 1.35e-52 197
Msa1133590 AT4G29040.1 42.570 249 135 4 243 488 187 430 3.08e-52 187
Msa1133590 AT2G20140.1 42.570 249 135 4 243 488 187 430 6.16e-52 186
Msa1133590 AT1G79560.3 31.311 412 242 11 237 616 486 888 9.40e-52 194
Msa1133590 AT1G79560.2 31.311 412 242 11 237 616 486 888 9.49e-52 194
Msa1133590 AT3G05530.1 39.286 252 145 4 236 484 163 409 2.57e-51 184
Msa1133590 AT5G43010.1 40.323 248 144 3 241 487 136 380 2.82e-51 183
Msa1133590 AT1G45000.1 40.323 248 144 3 241 487 136 380 4.39e-51 183
Msa1133590 AT3G56690.1 40.551 254 138 5 240 487 720 966 8.69e-51 191
Msa1133590 AT3G56690.1 42.714 199 107 4 272 469 413 605 2.59e-37 150
Msa1133590 AT5G58290.1 41.200 250 133 5 238 481 149 390 1.19e-50 182
Msa1133590 AT1G09100.1 38.095 252 148 4 236 484 162 408 1.85e-49 179
Msa1133590 AT3G53230.1 41.739 230 130 3 241 469 478 704 1.42e-47 181
Msa1133590 AT3G53230.1 38.078 281 149 6 222 484 187 460 2.09e-46 177
Msa1133590 AT5G03340.1 40.870 230 132 3 241 469 477 703 3.26e-47 179
Msa1133590 AT5G03340.1 39.700 267 149 6 222 484 186 444 6.05e-47 179
Msa1133590 AT3G09840.1 39.700 267 149 6 222 484 186 444 6.99e-47 178
Msa1133590 AT3G09840.1 40.000 230 135 2 241 469 477 704 2.57e-44 171
Msa1133590 AT2G03670.1 36.032 247 153 3 240 483 282 526 4.73e-40 156
Msa1133590 AT2G03670.1 34.940 249 145 7 245 483 23 264 3.15e-30 127
Msa1133590 AT3G01610.2 40.517 232 115 6 243 460 232 454 8.97e-40 157
Msa1133590 AT3G01610.2 35.897 273 151 7 241 496 525 790 5.04e-34 139
Msa1133590 AT3G01610.1 40.517 232 115 6 243 460 232 454 9.74e-40 157
Msa1133590 AT3G01610.1 35.897 273 151 7 241 496 525 790 5.01e-34 139
Msa1133590 AT1G03000.1 35.776 232 142 5 241 469 655 882 1.80e-37 150
Msa1133590 AT1G05910.1 35.985 264 156 5 241 497 378 635 4.93e-37 149
Msa1133590 AT1G64110.1 37.500 232 135 6 241 469 513 737 1.82e-36 147
Msa1133590 AT1G64110.5 37.500 232 135 5 241 469 516 740 1.96e-36 147
Msa1133590 AT1G64110.3 37.500 232 135 5 241 469 516 740 1.96e-36 147
Msa1133590 AT1G64110.2 37.500 232 135 5 241 469 518 742 2.04e-36 147
Msa1133590 AT1G64110.4 37.500 232 135 5 241 469 518 742 2.04e-36 147
Msa1133590 AT2G27600.1 39.474 228 122 9 238 460 126 342 3.10e-35 139
Msa1133590 AT3G04340.1 39.801 201 117 3 227 425 767 965 4.35e-35 144
Msa1133590 AT1G80350.1 37.838 259 136 8 236 481 231 477 7.57e-35 139
Msa1133590 AT4G28000.3 35.776 232 138 5 241 469 517 740 1.87e-34 140
Msa1133590 AT4G28000.1 35.776 232 138 5 241 469 515 738 2.47e-34 140
Msa1133590 AT4G28000.2 35.776 232 138 5 241 469 517 740 2.81e-34 140
Msa1133590 AT5G08470.1 36.052 233 128 5 243 467 843 1062 2.87e-34 141
Msa1133590 AT5G08470.3 36.052 233 128 5 243 467 834 1053 2.92e-34 140
Msa1133590 AT3G15120.2 39.224 232 128 6 243 467 728 953 4.21e-34 140
Msa1133590 AT3G15120.1 39.224 232 128 6 243 467 718 943 4.39e-34 140
Msa1133590 AT5G52882.1 36.638 232 136 5 241 469 514 737 5.02e-34 139
Msa1133590 AT1G50140.2 37.281 228 132 6 241 464 689 909 1.06e-33 139
Msa1133590 AT1G50140.5 37.281 228 132 6 241 464 689 909 1.06e-33 139
Msa1133590 AT1G50140.3 37.281 228 132 6 241 464 711 931 1.24e-33 139
Msa1133590 AT1G50140.1 37.281 228 132 6 241 464 711 931 1.24e-33 139
Msa1133590 AT1G50140.4 37.281 228 132 6 241 464 711 931 1.24e-33 139
Msa1133590 AT4G02480.1 31.457 302 170 7 241 512 960 1254 7.09e-33 137
Msa1133590 AT5G53540.1 36.864 236 131 8 241 469 84 308 1.22e-32 131
Msa1133590 AT3G19740.1 36.842 228 133 6 241 464 701 921 2.92e-32 134
Msa1133590 AT4G27680.1 37.712 236 129 8 241 469 81 305 2.24e-31 127
Msa1133590 AT2G45500.4 34.137 249 141 8 236 475 75 309 2.33e-31 126
Msa1133590 AT2G45500.3 34.137 249 141 8 236 475 75 309 2.33e-31 126
Msa1133590 AT2G34560.1 38.362 232 133 8 241 469 100 324 2.86e-31 126
Msa1133590 AT2G34560.2 38.362 232 133 8 241 469 109 333 3.24e-31 126
Msa1133590 AT2G03670.2 34.940 249 145 7 245 483 23 264 8.42e-31 126
Msa1133590 AT2G03670.2 36.429 140 88 1 240 378 282 421 2.41e-18 88.6
Msa1133590 AT1G02890.1 30.132 302 174 7 241 512 941 1235 1.18e-30 129
Msa1133590 AT2G45500.2 34.137 249 141 8 236 475 208 442 1.29e-30 126
Msa1133590 AT2G45500.1 34.137 249 141 8 236 475 212 446 1.58e-30 126
Msa1133590 AT2G45500.5 34.137 249 141 8 236 475 218 452 1.72e-30 126
Msa1133590 AT4G24860.1 35.965 228 135 6 241 464 817 1037 2.67e-30 128
Msa1133590 AT4G24860.3 35.965 228 135 6 241 464 815 1035 3.18e-30 128
Msa1133590 AT4G24860.4 35.965 228 135 6 241 464 790 1010 3.78e-30 128
Msa1133590 AT4G24860.2 35.965 228 135 6 241 464 813 1033 3.99e-30 128
Msa1133590 AT3G27120.1 35.391 243 141 7 229 465 388 620 2.19e-28 121
Msa1133590 AT4G04910.1 38.498 213 110 6 266 463 239 445 5.65e-28 120
Msa1133590 AT4G04180.2 30.952 252 149 8 222 463 296 532 7.37e-26 113
Msa1133590 AT4G04180.1 30.952 252 149 8 222 463 301 537 9.44e-26 113
Msa1133590 AT1G62130.1 33.333 231 125 7 241 464 750 958 3.37e-25 112
Msa1133590 AT1G62130.2 33.333 231 125 7 241 464 743 951 3.72e-25 112
Msa1133590 AT1G45000.2 40.288 139 81 2 241 378 136 273 4.74e-23 101
Msa1133590 AT1G02890.2 26.159 302 158 8 241 512 941 1207 6.01e-19 92.4
Msa1133590 AT5G08470.2 34.211 152 89 3 243 390 843 987 1.30e-18 91.3
Msa1133590 AT3G50930.1 33.696 184 93 8 243 410 264 434 3.39e-12 70.1
Msa1133590 AT3G28610.1 28.467 274 153 12 243 497 202 451 5.26e-12 69.3
Msa1133590 AT5G40000.1 26.966 267 163 9 243 496 206 453 1.12e-11 68.2

Find 203 sgRNAs with CRISPR-Local

Find 305 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATAAATATTATTTCAATAT+TGG 0.141331 7_3:-87224704 Msa1133590:CDS
TTCAAATAAGTCATATATTA+TGG 0.151888 7_3:+87222866 None:intergenic
TAGAGTGAGAAACTTGTTTA+AGG 0.174086 7_3:-87224036 Msa1133590:CDS
GTTACCTATTCTTCTGAAAT+TGG 0.199385 7_3:-87224605 Msa1133590:CDS
GCAGCAGCAGATTAGCTTTC+AGG 0.211301 7_3:-87224963 Msa1133590:CDS
TTGGAATTCTTCTCAAATAT+TGG 0.229345 7_3:-87222721 Msa1133590:three_prime_UTR
CCAAGCTCTTGGTATTTCTT+AGG 0.233058 7_3:+87224209 None:intergenic
ATAAATATTATTTCAATATT+GGG 0.236143 7_3:-87224703 Msa1133590:CDS
ATATTATTCTTCTCAGATAT+TGG 0.245024 7_3:-87222785 Msa1133590:three_prime_UTR
TGCTGTTGCAGGTTGGTTCT+TGG 0.252343 7_3:-87223466 Msa1133590:CDS
TTTGGCATTTCTCATCTATA+TGG 0.257662 7_3:-87224540 Msa1133590:CDS
CAGGTTTATCAATTGTTATT+TGG 0.261861 7_3:+87223781 None:intergenic
GAGAGTTCAAAACATATATC+TGG 0.273733 7_3:+87224873 None:intergenic
TTCCTTCACTTCATAAATTC+AGG 0.281074 7_3:-87226260 Msa1133590:intron
AGATGACTTGCTTCCAATCT+TGG 0.281284 7_3:-87222986 Msa1133590:CDS
ACCTCAGGCTCTATCATAAT+TGG 0.281315 7_3:+87222934 None:intergenic
ACCCTTCCTGCGAAGGGATA+TGG 0.294128 7_3:-87224734 Msa1133590:CDS
GGAGTTTATGAATAAGCTTT+TGG 0.304203 7_3:-87224942 Msa1133590:CDS
TGAGGCAAAACAAGAAATTA+TGG 0.336127 7_3:-87224255 Msa1133590:CDS
GCTCTTCTGGTGGGTCCTCC+AGG 0.336675 7_3:-87224167 Msa1133590:CDS
AATTCCAAAAGGTGCTCTTC+TGG 0.340894 7_3:-87224180 Msa1133590:CDS
TGGTGGTCGGGCTGCCGAGC+AGG 0.341124 7_3:-87223310 Msa1133590:CDS
TCCCTTACTCCAGGATTTGC+TGG 0.341796 7_3:-87223669 Msa1133590:CDS
TGATAGGATCATTGGTGGTT+TGG 0.342606 7_3:-87223553 Msa1133590:CDS
GCCGGTGGTAAGGGTCCTTT+TGG 0.346091 7_3:-87224515 Msa1133590:CDS
CCTCGCGGATCATCGGCTCT+TGG 0.353189 7_3:-87223408 Msa1133590:CDS
GATTTCTTAGAACTGTTTGT+TGG 0.356042 7_3:-87224071 Msa1133590:CDS
CATTCAACACCTGTTGCCTT+TGG 0.359012 7_3:-87224558 Msa1133590:CDS
ATTTGTTTGAGGAAACAGTA+TGG 0.369018 7_3:-87225173 Msa1133590:exon
AAATGCTCTACTAAACATTT+AGG 0.370536 7_3:+87222683 None:intergenic
AACAGTGATGCAAGATTGAT+TGG 0.371102 7_3:+87225203 None:intergenic
GGTTCTCATTCGGAACATAC+TGG 0.373559 7_3:+87223379 None:intergenic
TAGAGCATTTGAATTGGAAT+TGG 0.373744 7_3:-87222670 None:intergenic
CTCGCGGATCATCGGCTCTT+GGG 0.376272 7_3:-87223407 Msa1133590:CDS
TCGCCATCGCCGCCGACAAT+GGG 0.376809 7_3:+87225041 None:intergenic
GATGACTTGCTTCCAATCTT+GGG 0.377308 7_3:-87222985 Msa1133590:CDS
CAACAGCATGACCTGCTTCA+TGG 0.377810 7_3:+87223481 None:intergenic
AAAGCAACTGCAGGGGAATC+TGG 0.378044 7_3:-87224122 Msa1133590:CDS
CTATATGGTTGCCGGTGGTA+AGG 0.395182 7_3:-87224525 Msa1133590:CDS
GTTTAGTAGAGCATTTGAAT+TGG 0.395638 7_3:-87222676 Msa1133590:three_prime_UTR
TTTCTCATCTATATGGTTGC+CGG 0.396422 7_3:-87224533 Msa1133590:CDS
CACCCCATTGTCGGCGGCGA+TGG 0.397410 7_3:-87225044 Msa1133590:CDS
TCAAGTAAATCTGAAATATC+TGG 0.398278 7_3:+87223742 None:intergenic
TTAGAACTGTTTGTTGGTGT+TGG 0.399000 7_3:-87224065 Msa1133590:CDS
ATTTCGAGGCAGCTATTGAT+AGG 0.405057 7_3:-87223569 Msa1133590:CDS
AAAAGGGTCTTCCCTGTGCC+TGG 0.405205 7_3:+87224149 None:intergenic
CTGGTGGGTCCTCCAGGCAC+AGG 0.412352 7_3:-87224161 Msa1133590:CDS
TTGTATGACCCTTGGTGGTC+GGG 0.412979 7_3:-87223322 Msa1133590:CDS
GTTTAGTAGAGCATTTGAAT+TGG 0.413524 7_3:-87222740 Msa1133590:three_prime_UTR
CCCACCAGAAGAGCACCTTT+TGG 0.413587 7_3:+87224176 None:intergenic
TTCTGAAATTGGCTGGCACC+TGG 0.417740 7_3:-87224594 Msa1133590:CDS
TATGCTCAAGTAGCCGTCTA+TGG 0.420332 7_3:-87223225 Msa1133590:CDS
ATTTCAGAAGAATAGGTAAC+AGG 0.420734 7_3:+87224608 None:intergenic
CGCCTCGCCGTCGCCGTCAC+CGG 0.429111 7_3:+87226415 None:intergenic
GAAGCAGGTCATGCTGTTGC+AGG 0.430567 7_3:-87223477 Msa1133590:CDS
ATTGATGAAATTGATGCAAT+TGG 0.431450 7_3:-87223981 Msa1133590:CDS
GTCATATATTATGGGATGAA+TGG 0.434709 7_3:+87222875 None:intergenic
GATGGCTTTGGAACCACTGC+TGG 0.435918 7_3:-87223879 Msa1133590:CDS
TATTTCAGATTTACTTGAAA+GGG 0.438357 7_3:-87223737 Msa1133590:CDS
TGGTCACGACCTTTGATGTC+AGG 0.443122 7_3:+87223762 None:intergenic
TGGTGATTCAGTACTCTTGA+AGG 0.444257 7_3:+87222954 None:intergenic
CCAGCCAATTTCAGAAGAAT+AGG 0.446134 7_3:+87224601 None:intergenic
AAACCATACAGCAACAAAAC+TGG 0.446545 7_3:-87223141 Msa1133590:CDS
CCTATTCTTCTGAAATTGGC+TGG 0.447841 7_3:-87224601 Msa1133590:CDS
GTGCCATTTCTCTCAATATC+CGG 0.449729 7_3:-87224098 Msa1133590:CDS
CAATAGTTACTTTCAACAAT+GGG 0.453504 7_3:+87223433 None:intergenic
GAACCGGATATTGAGAGAAA+TGG 0.454858 7_3:+87224095 None:intergenic
AAGTACTTTAAATCAATTGT+TGG 0.458092 7_3:-87223910 Msa1133590:CDS
TCAAATAAGTCATATATTAT+GGG 0.459122 7_3:+87222867 None:intergenic
GTCATGAGAAGGTTCTCATT+CGG 0.459278 7_3:+87223369 None:intergenic
CTCCAGCAAATCCTGGAGTA+AGG 0.460210 7_3:+87223667 None:intergenic
AAGGGTCGCACACCCAAGAT+TGG 0.464532 7_3:+87222973 None:intergenic
TATTGTTCCTCGCGGATCAT+CGG 0.464947 7_3:-87223415 Msa1133590:CDS
TGAGAAATGCCAAAGGCAAC+AGG 0.465291 7_3:+87224549 None:intergenic
AGGGCTTTGTCTAATACATC+AGG 0.465840 7_3:+87223828 None:intergenic
AAATCAATTGTTGGTGGAGA+TGG 0.466589 7_3:-87223901 Msa1133590:CDS
TCGCTCACGCGTCGCCGCAC+CGG 0.473168 7_3:+87226370 None:intergenic
ATCGCCATCGCCGCCGACAA+TGG 0.473751 7_3:+87225040 None:intergenic
TTGGTGGAGATGGATGGCTT+TGG 0.474835 7_3:-87223891 Msa1133590:CDS
CCGATGTTAAAGACTCCAAA+AGG 0.480457 7_3:+87224500 None:intergenic
GTTTATCAATTGTTATTTGG+CGG 0.482713 7_3:+87223784 None:intergenic
AAATGCTCTACTAAACGTTT+AGG 0.483932 7_3:+87222747 None:intergenic
GCTGCCGAGCAGGTTCTCAT+TGG 0.485652 7_3:-87223300 Msa1133590:CDS
AGAATTTCGCACCCCATTGT+CGG 0.486791 7_3:-87225053 Msa1133590:CDS
CACTGCTGGAGTTGTTGTGC+TGG 0.487338 7_3:-87223865 Msa1133590:CDS
ATATCCGCTCCAGCAAATCC+TGG 0.487859 7_3:+87223660 None:intergenic
TACTTGAGCATATGTCATCT+TGG 0.491081 7_3:+87223236 None:intergenic
GCAGCTATTGATAGGATCAT+TGG 0.491525 7_3:-87223561 Msa1133590:CDS
TCATCAATAAATACTATACT+AGG 0.493104 7_3:+87223996 None:intergenic
TATATGGTTGCCGGTGGTAA+GGG 0.494089 7_3:-87224524 Msa1133590:CDS
CTTGTATGACCCTTGGTGGT+CGG 0.495286 7_3:-87223323 Msa1133590:CDS
CTCATTGGAACAATCTCTAC+AGG 0.497010 7_3:-87223285 Msa1133590:CDS
CAAAACGCCCTGGTCTAAGT+AGG 0.497564 7_3:+87223808 None:intergenic
GCTGGAGTTGTTGTGCTGGC+AGG 0.497655 7_3:-87223861 Msa1133590:CDS
TTGATAATGAAGTGCGAGAA+TGG 0.499292 7_3:-87223110 Msa1133590:CDS
ACTGAGGTTAGAGAGGAGTA+AGG 0.499321 7_3:+87226440 None:intergenic
TTGATGCAATTGGTCGGGCA+AGG 0.500453 7_3:-87223971 Msa1133590:CDS
AGAGAGAGCTCAAATAGCAC+TGG 0.502174 7_3:-87224654 Msa1133590:CDS
GATAGGACTTGTATGACCCT+TGG 0.505375 7_3:-87223330 Msa1133590:CDS
TCCTCTCTAACCTCAGTCTC+CGG 0.510242 7_3:-87226434 Msa1133590:five_prime_UTR
TTTGTTTGAGGAAACAGTAT+GGG 0.515714 7_3:-87225172 Msa1133590:exon
GTTGTTCCTTTGTCATGAGA+AGG 0.516090 7_3:+87223358 None:intergenic
TACAGGAGCACAAGATGACT+TGG 0.518130 7_3:-87223268 Msa1133590:CDS
CAGTTCTAAGAAATCAGAAC+CGG 0.518886 7_3:+87224079 None:intergenic
TCCAAAAGGTGCTCTTCTGG+TGG 0.519532 7_3:-87224177 Msa1133590:CDS
ACAATATGATCTACCAATCC+TGG 0.522222 7_3:+87224917 None:intergenic
AGATTGGAAGCAAGTCATCT+TGG 0.522810 7_3:+87222989 None:intergenic
CAACTATGTGGAACAACCTC+AGG 0.525515 7_3:+87222919 None:intergenic
TACTTTAAATCAATTGTTGG+TGG 0.526387 7_3:-87223907 Msa1133590:CDS
CACCATATCCCTTCGCAGGA+AGG 0.526594 7_3:+87224732 None:intergenic
AAGCTTGCATCCCTTACTCC+AGG 0.530533 7_3:-87223678 Msa1133590:CDS
TTGTCTACTTTAGTAAAATG+TGG 0.531413 7_3:+87224473 None:intergenic
AGAGTTCAAAACATATATCT+GGG 0.532045 7_3:+87224874 None:intergenic
TGATGCAATTGGTCGGGCAA+GGG 0.533289 7_3:-87223970 Msa1133590:CDS
ACAATAGTTACTTTCAACAA+TGG 0.533587 7_3:+87223432 None:intergenic
TGGTGGGTCCTCCAGGCACA+GGG 0.536261 7_3:-87224160 Msa1133590:CDS
TGAAGTGAAGGAAATCAAGA+AGG 0.536432 7_3:+87226270 None:intergenic
CTCGGCAGCCCGACCACCAA+GGG 0.536999 7_3:+87223314 None:intergenic
TGAAATTGATGCAATTGGTC+GGG 0.538277 7_3:-87223976 Msa1133590:CDS
CTTAAACATACTCAACTATG+TGG 0.539986 7_3:+87222907 None:intergenic
CGTCACACATGATCATTTCG+AGG 0.540747 7_3:-87223583 Msa1133590:CDS
ACCATATCCCTTCGCAGGAA+GGG 0.541666 7_3:+87224733 None:intergenic
TGCCCACCATATCCCTTCGC+AGG 0.542347 7_3:+87224728 None:intergenic
ATATTTCAGATTTACTTGAA+AGG 0.542997 7_3:-87223738 Msa1133590:CDS
CAGGTCATGCTGTTGCAGGT+TGG 0.548618 7_3:-87223473 Msa1133590:CDS
TTCGTTTCTGTTTGATTACG+AGG 0.548639 7_3:+87224824 None:intergenic
TTCGTTTCTGTTTGATTACG+AGG 0.548639 7_3:+87224851 None:intergenic
CTTGGTGCCAAAATTCCAAA+AGG 0.552017 7_3:-87224191 Msa1133590:CDS
AACCTGAATTTATGAAGTGA+AGG 0.552716 7_3:+87226258 None:intergenic
AGAAGAAACCCTTCCTGCGA+AGG 0.555125 7_3:-87224741 Msa1133590:CDS
GAAACTTGTTTAAGGAAGCA+AGG 0.555548 7_3:-87224028 Msa1133590:CDS
CCTAAGAAATACCAAGAGCT+TGG 0.555551 7_3:-87224209 Msa1133590:CDS
GTTCTCATTCGGAACATACT+GGG 0.557136 7_3:+87223380 None:intergenic
TTCGTATCTGTTTGATTACG+AGG 0.557306 7_3:+87224797 None:intergenic
CTCCGGTGACGGCGACGGCG+AGG 0.557585 7_3:-87226417 Msa1133590:five_prime_UTR
AGCTTACGTGAATAATATGA+AGG 0.560744 7_3:+87223696 None:intergenic
ACCGTTGCTTACCATGAAGC+AGG 0.562002 7_3:-87223492 Msa1133590:CDS
GGTATTTCTTAGGACTCTTG+AGG 0.566392 7_3:+87224219 None:intergenic
GATGCAATTGGTCGGGCAAG+GGG 0.566686 7_3:-87223969 Msa1133590:CDS
GCTATTGATAGGATCATTGG+TGG 0.567101 7_3:-87223558 Msa1133590:CDS
ATTTGGCGGTCAAAACGCCC+TGG 0.570824 7_3:+87223798 None:intergenic
ATGAAATTGATGCAATTGGT+CGG 0.570840 7_3:-87223977 Msa1133590:CDS
GAAGAAACCCTTCCTGCGAA+GGG 0.573228 7_3:-87224740 Msa1133590:CDS
GATGGCGATGATACTGATGA+TGG 0.573875 7_3:-87225026 Msa1133590:CDS
TCAGTCTCCGGTGACGGCGA+CGG 0.575849 7_3:-87226422 Msa1133590:five_prime_UTR
GCTCGGCAGCCCGACCACCA+AGG 0.576079 7_3:+87223313 None:intergenic
AAGTCAAACACAGAAGATGA+AGG 0.576484 7_3:-87225113 Msa1133590:CDS
TCCAGCAAATCCTGGAGTAA+GGG 0.577389 7_3:+87223668 None:intergenic
TCTGTTGTCGCGACTGAGAG+AGG 0.577419 7_3:+87226343 None:intergenic
GAAGCTTATAGAGAAAGAGA+AGG 0.580722 7_3:-87223061 Msa1133590:CDS
CAAACACAGAAGATGAAGGA+AGG 0.581136 7_3:-87225109 Msa1133590:CDS
CCAAAAGGTGCTCTTCTGGT+GGG 0.582841 7_3:-87224176 Msa1133590:CDS
CGCCATCGCCGCCGACAATG+GGG 0.584073 7_3:+87225042 None:intergenic
AAAACGCCCTGGTCTAAGTA+GGG 0.589323 7_3:+87223809 None:intergenic
ATTGATAAACCTGACATCAA+AGG 0.590486 7_3:-87223771 Msa1133590:CDS
GAATGAATGTCAAGAACTCC+AGG 0.593301 7_3:+87224576 None:intergenic
GACAAAGCCCTACTTAGACC+AGG 0.594683 7_3:-87223816 Msa1133590:CDS
ACCAATTATGATAGAGCCTG+AGG 0.595840 7_3:-87222935 Msa1133590:CDS
ACCGGAGACTGAGGTTAGAG+AGG 0.596652 7_3:+87226433 None:intergenic
TGATAATGAAGTGCGAGAAT+GGG 0.597932 7_3:-87223109 Msa1133590:CDS
CTCATCTATATGGTTGCCGG+TGG 0.598370 7_3:-87224530 Msa1133590:CDS
CGGGCAAGGGGTAGTAGAGG+CGG 0.598922 7_3:-87223957 Msa1133590:CDS
GGTGATTCAGTACTCTTGAA+GGG 0.599010 7_3:+87222955 None:intergenic
ACGACATCGCACAGTCTCAC+CGG 0.600088 7_3:-87226389 Msa1133590:five_prime_UTR
CTTCCTGCGAAGGGATATGG+TGG 0.605558 7_3:-87224731 Msa1133590:CDS
TCTGTTTCTGTTTGATTACG+AGG 0.607446 7_3:+87224770 None:intergenic
TACTCCAGGATTTGCTGGAG+CGG 0.607722 7_3:-87223664 Msa1133590:CDS
TTCTGCAGTATCAAGAACAA+TGG 0.609024 7_3:+87225233 None:intergenic
CTAACCTCAGTCTCCGGTGA+CGG 0.609048 7_3:-87226428 Msa1133590:five_prime_UTR
ACCTGCTTCATGGTAAGCAA+CGG 0.609319 7_3:+87223491 None:intergenic
ATGGCGATGATACTGATGAT+GGG 0.613407 7_3:-87225025 Msa1133590:CDS
ATTTCGCACCCCATTGTCGG+CGG 0.615024 7_3:-87225050 Msa1133590:CDS
ACAGTGATGCAAGATTGATT+GGG 0.615868 7_3:+87225204 None:intergenic
TAACAGGTACAAAATCATGA+TGG 0.616641 7_3:+87224624 None:intergenic
GGTCGGGCAAGGGGTAGTAG+AGG 0.619478 7_3:-87223960 Msa1133590:CDS
AGGACTTGTATGACCCTTGG+TGG 0.619993 7_3:-87223327 Msa1133590:CDS
GAAGTGAAGGAAATCAAGAA+GGG 0.620928 7_3:+87226271 None:intergenic
TGTTCCAATGAGAACCTGCT+CGG 0.621791 7_3:+87223296 None:intergenic
GTCGCCGTCACCGGAGACTG+AGG 0.629614 7_3:+87226424 None:intergenic
CAGCACAACAACTCCAGCAG+TGG 0.631517 7_3:+87223866 None:intergenic
TCCAAAAGGACCCTTACCAC+CGG 0.633292 7_3:+87224514 None:intergenic
ACAAAGCCCTACTTAGACCA+GGG 0.635104 7_3:-87223815 Msa1133590:CDS
GTGAATAATATGAAGGCTCG+TGG 0.635461 7_3:+87223703 None:intergenic
AAGCTGCTCTGATTGCTGCA+AGG 0.638573 7_3:-87223620 Msa1133590:CDS
TGAGAACCTTCTCATGACAA+AGG 0.638697 7_3:-87223364 Msa1133590:CDS
CAATTGTTGGTGGAGATGGA+TGG 0.642273 7_3:-87223897 Msa1133590:CDS
GGTGAGACTGTGCGATGTCG+TGG 0.642413 7_3:+87226391 None:intergenic
TAATGAAGTGCGAGAATGGG+TGG 0.649940 7_3:-87223106 Msa1133590:CDS
GGAGAAAGTAGCTCAACTTG+CGG 0.651792 7_3:-87223040 Msa1133590:CDS
GAGAGAGCTCAAATAGCACT+GGG 0.653868 7_3:-87224653 Msa1133590:CDS
CAGTATCAAGAACAATGGAG+TGG 0.659087 7_3:+87225238 None:intergenic
TTTAGCAAAAGCAACTGCAG+GGG 0.659558 7_3:-87224129 Msa1133590:CDS
TGGTTTGGAGAAGAAGAACA+AGG 0.659827 7_3:-87223538 Msa1133590:CDS
AAAGTAACTATTGTTCCTCG+CGG 0.664079 7_3:-87223423 Msa1133590:CDS
AGGGTCTTCCCTGTGCCTGG+AGG 0.665486 7_3:+87224152 None:intergenic
CGTAATCAAACAGAAACAGA+CGG 0.675072 7_3:-87224767 Msa1133590:CDS
ATCGCACAGTCTCACCGGTG+CGG 0.681767 7_3:-87226384 Msa1133590:five_prime_UTR
AGATGTTGCTGGCTGTGATG+AGG 0.687105 7_3:-87224273 Msa1133590:CDS
TGGCGATGATACTGATGATG+GGG 0.688912 7_3:-87225024 Msa1133590:CDS
ATATAGATGAGAAATGCCAA+AGG 0.694545 7_3:+87224542 None:intergenic
TTCCTGCGAAGGGATATGGT+GGG 0.714800 7_3:-87224730 Msa1133590:CDS
TCGCATAGTTTCAGTTCACG+CGG 0.732567 7_3:-87226465 Msa1133590:five_prime_UTR
CCAAGAGCCGATGATCCGCG+AGG 0.755348 7_3:+87223408 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATATTGTAGTTAATATTT+TGG - chr7_3:87223825-87223844 Msa1133590:CDS 10.0%
!!! AATATTGTAGTTAATATTTT+GGG - chr7_3:87223826-87223845 Msa1133590:CDS 10.0%
!!! TTTATTCTTTTGTAAATAAA+TGG - chr7_3:87224715-87224734 Msa1133590:CDS 10.0%
!!! TTATATATTTTTCTTAATCT+AGG + chr7_3:87226301-87226320 None:intergenic 10.0%
!! AAATCTAAGTAAAAGAATTT+AGG + chr7_3:87223121-87223140 None:intergenic 15.0%
!!! TTTTTTTAAATCACATAAAG+AGG - chr7_3:87223149-87223168 Msa1133590:CDS 15.0%
!!! TTTTTTAAATCACATAAAGA+GGG - chr7_3:87223150-87223169 Msa1133590:CDS 15.0%
!!! TTATTTTGAATTCTGTTTAT+TGG - chr7_3:87223224-87223243 Msa1133590:CDS 15.0%
!! TCAAATAAGTCATATATTAT+GGG + chr7_3:87226270-87226289 None:intergenic 15.0%
!! TTCAAATAAGTCATATATTA+TGG + chr7_3:87226271-87226290 None:intergenic 15.0%
!! AAATTGAATCAAACAACATA+GGG + chr7_3:87223012-87223031 None:intergenic 20.0%
!! AAAATTGAATCAAACAACAT+AGG + chr7_3:87223013-87223032 None:intergenic 20.0%
!!! ATTCTTTTACTTAGATTTTG+TGG - chr7_3:87223123-87223142 Msa1133590:CDS 20.0%
!!! TTCTTTTACTTAGATTTTGT+GGG - chr7_3:87223124-87223143 Msa1133590:CDS 20.0%
!! ATAAAAATCACATTAAGATC+AGG + chr7_3:87223197-87223216 None:intergenic 20.0%
!!! TTGTTTATGATTTGGTTAAT+TGG - chr7_3:87223335-87223354 Msa1133590:CDS 20.0%
!! TTGAAATTCTATTTATGACT+TGG - chr7_3:87223464-87223483 Msa1133590:CDS 20.0%
!!! TGTTCAAAAAAATTTGTTTG+AGG - chr7_3:87223950-87223969 Msa1133590:CDS 20.0%
!!! TCTATCTTATATTTTGATAC+TGG - chr7_3:87224142-87224161 Msa1133590:CDS 20.0%
!!! CTATCTTATATTTTGATACT+GGG - chr7_3:87224143-87224162 Msa1133590:CDS 20.0%
!! TCATCAATAAATACTATACT+AGG + chr7_3:87225141-87225160 None:intergenic 20.0%
!! AAGTACTTTAAATCAATTGT+TGG - chr7_3:87225224-87225243 Msa1133590:five_prime_UTR 20.0%
!! ATATTTCAGATTTACTTGAA+AGG - chr7_3:87225396-87225415 Msa1133590:intron 20.0%
!! TATTTCAGATTTACTTGAAA+GGG - chr7_3:87225397-87225416 Msa1133590:intron 20.0%
!! ATATTATTCTTCTCAGATAT+TGG - chr7_3:87226349-87226368 Msa1133590:five_prime_UTR 20.0%
! AACCCTAGAAATCAAAAATT+GGG - chr7_3:87222966-87222985 Msa1133590:CDS 25.0%
!!! TTTTATCATTGTCGTTTGAT+TGG - chr7_3:87223038-87223057 Msa1133590:CDS 25.0%
! GAATTTAGGAAAACAATTAG+AGG + chr7_3:87223107-87223126 None:intergenic 25.0%
!!! GATGATGAATTATGTTTTGA+TGG - chr7_3:87223263-87223282 Msa1133590:CDS 25.0%
!!! CTGGAATTTTGTTTATGATT+TGG - chr7_3:87223327-87223346 Msa1133590:CDS 25.0%
! AATAGAATTTCAACTGGATT+TGG + chr7_3:87223457-87223476 None:intergenic 25.0%
! GTCATAAATAGAATTTCAAC+TGG + chr7_3:87223463-87223482 None:intergenic 25.0%
!!! CTATTTATGACTTGGTTAAT+TGG - chr7_3:87223472-87223491 Msa1133590:CDS 25.0%
! AATTGGAAAAGTTTATGACT+TGG - chr7_3:87223489-87223508 Msa1133590:CDS 25.0%
! GTTAGTTATAGTTTATGACT+TGG - chr7_3:87223564-87223583 Msa1133590:CDS 25.0%
! TAGCCTAATGTTATTAAAGT+TGG - chr7_3:87223608-87223627 Msa1133590:CDS 25.0%
! AGTCCAACTTTAATAACATT+AGG + chr7_3:87223614-87223633 None:intergenic 25.0%
! AGAGTTCAAAACATATATCT+GGG + chr7_3:87224263-87224282 None:intergenic 25.0%
! TTGTCTACTTTAGTAAAATG+TGG + chr7_3:87224664-87224683 None:intergenic 25.0%
!!! TGTCTGAATTATTTTTTGTC+AGG - chr7_3:87224828-87224847 Msa1133590:CDS 25.0%
! ATTGATGAAATTGATGCAAT+TGG - chr7_3:87225153-87225172 Msa1133590:CDS 25.0%
! TACTTTAAATCAATTGTTGG+TGG - chr7_3:87225227-87225246 Msa1133590:five_prime_UTR 25.0%
!!! GTTTATCAATTGTTATTTGG+CGG + chr7_3:87225353-87225372 None:intergenic 25.0%
!! CAGGTTTATCAATTGTTATT+TGG + chr7_3:87225356-87225375 None:intergenic 25.0%
!! TCAAGTAAATCTGAAATATC+TGG + chr7_3:87225395-87225414 None:intergenic 25.0%
!! CAATAGTTACTTTCAACAAT+GGG + chr7_3:87225704-87225723 None:intergenic 25.0%
!! ACAATAGTTACTTTCAACAA+TGG + chr7_3:87225705-87225724 None:intergenic 25.0%
! TTGGAATTCTTCTCAAATAT+TGG - chr7_3:87226413-87226432 Msa1133590:five_prime_UTR 25.0%
! AAATGCTCTACTAAACATTT+AGG + chr7_3:87226454-87226473 None:intergenic 25.0%
TTCCTTCACTTCATAAATTC+AGG - chr7_3:87222874-87222893 Msa1133590:three_prime_UTR 30.0%
AACCTGAATTTATGAAGTGA+AGG + chr7_3:87222879-87222898 None:intergenic 30.0%
CACTTGATTCAATTCAATGT+CGG - chr7_3:87222919-87222938 Msa1133590:CDS 30.0%
GAACCCTAGAAATCAAAAAT+TGG - chr7_3:87222965-87222984 Msa1133590:CDS 30.0%
ACCCTAGAAATCAAAAATTG+GGG - chr7_3:87222967-87222986 Msa1133590:CDS 30.0%
! TGATTGGAGATTTTCAATTG+AGG - chr7_3:87223054-87223073 Msa1133590:CDS 30.0%
! TTGATGGAGAGAAATTTTGT+TGG - chr7_3:87223279-87223298 Msa1133590:CDS 30.0%
GGAATGAATAGTTTATGACT+TGG - chr7_3:87223300-87223319 Msa1133590:CDS 30.0%
!! TAGTTTATGACTTGGTTAAC+TGG - chr7_3:87223308-87223327 Msa1133590:CDS 30.0%
!! GATGATGAATTTTGTTGTAG+TGG - chr7_3:87223526-87223545 Msa1133590:CDS 30.0%
!! TTTTGTTGTAGTGGCTTAAT+TGG - chr7_3:87223535-87223554 Msa1133590:CDS 30.0%
!!! GATTTTTTCTATTCTGCAAG+TGG - chr7_3:87223649-87223668 Msa1133590:CDS 30.0%
!! TAGTTGGTAGCTAGTATATT+TGG - chr7_3:87223724-87223743 Msa1133590:CDS 30.0%
ATTTGTTTGAGGAAACAGTA+TGG - chr7_3:87223961-87223980 Msa1133590:CDS 30.0%
TTTGTTTGAGGAAACAGTAT+GGG - chr7_3:87223962-87223981 Msa1133590:CDS 30.0%
! GGAGTTTATGAATAAGCTTT+TGG - chr7_3:87224192-87224211 Msa1133590:CDS 30.0%
GAGAGTTCAAAACATATATC+TGG + chr7_3:87224264-87224283 None:intergenic 30.0%
TAACAGGTACAAAATCATGA+TGG + chr7_3:87224513-87224532 None:intergenic 30.0%
ATTTCAGAAGAATAGGTAAC+AGG + chr7_3:87224529-87224548 None:intergenic 30.0%
!! GTTACCTATTCTTCTGAAAT+TGG - chr7_3:87224529-87224548 Msa1133590:CDS 30.0%
ATATAGATGAGAAATGCCAA+AGG + chr7_3:87224595-87224614 None:intergenic 30.0%
TTTGGCATTTCTCATCTATA+TGG - chr7_3:87224594-87224613 Msa1133590:CDS 30.0%
!! ATTTGTATTTTAGGGAGTTG+TGG - chr7_3:87224752-87224771 Msa1133590:CDS 30.0%
!! GTCTATTTTAAAGATGTTGC+TGG - chr7_3:87224850-87224869 Msa1133590:CDS 30.0%
TGAGGCAAAACAAGAAATTA+TGG - chr7_3:87224879-87224898 Msa1133590:CDS 30.0%
GATTTCTTAGAACTGTTTGT+TGG - chr7_3:87225063-87225082 Msa1133590:CDS 30.0%
! TAGAGTGAGAAACTTGTTTA+AGG - chr7_3:87225098-87225117 Msa1133590:CDS 30.0%
ATGAAATTGATGCAATTGGT+CGG - chr7_3:87225157-87225176 Msa1133590:CDS 30.0%
ATTGATAAACCTGACATCAA+AGG - chr7_3:87225363-87225382 Msa1133590:intron 30.0%
AGCTTACGTGAATAATATGA+AGG + chr7_3:87225441-87225460 None:intergenic 30.0%
CTTAAACATACTCAACTATG+TGG + chr7_3:87226230-87226249 None:intergenic 30.0%
GTCATATATTATGGGATGAA+TGG + chr7_3:87226262-87226281 None:intergenic 30.0%
AAATGCTCTACTAAACGTTT+AGG + chr7_3:87226390-87226409 None:intergenic 30.0%
! GTTTAGTAGAGCATTTGAAT+TGG - chr7_3:87226394-87226413 Msa1133590:five_prime_UTR 30.0%
! GTTTAGTAGAGCATTTGAAT+TGG - chr7_3:87226394-87226413 Msa1133590:five_prime_UTR 30.0%
GAAGTGAAGGAAATCAAGAA+GGG + chr7_3:87222866-87222885 None:intergenic 35.0%
TGAAGTGAAGGAAATCAAGA+AGG + chr7_3:87222867-87222886 None:intergenic 35.0%
!!! CCCCCAATTTTTGATTTCTA+GGG + chr7_3:87222971-87222990 None:intergenic 35.0%
CCCTAGAAATCAAAAATTGG+GGG - chr7_3:87222968-87222987 Msa1133590:CDS 35.0%
!!! TCCCCCAATTTTTGATTTCT+AGG + chr7_3:87222972-87222991 None:intergenic 35.0%
CAAACAACATAGGGAATCAA+TGG + chr7_3:87223003-87223022 None:intergenic 35.0%
TTCACTCGTTGAATTCTGTA+AGG - chr7_3:87223379-87223398 Msa1133590:CDS 35.0%
! CTGGATTTGGAACAATTCTT+GGG + chr7_3:87223444-87223463 None:intergenic 35.0%
! ACTGGATTTGGAACAATTCT+TGG + chr7_3:87223445-87223464 None:intergenic 35.0%
!! TTGGAGCTTTAGATTTGTGT+TGG - chr7_3:87223743-87223762 Msa1133590:CDS 35.0%
TTCTGCAGTATCAAGAACAA+TGG + chr7_3:87223904-87223923 None:intergenic 35.0%
ACAGTGATGCAAGATTGATT+GGG + chr7_3:87223933-87223952 None:intergenic 35.0%
AACAGTGATGCAAGATTGAT+TGG + chr7_3:87223934-87223953 None:intergenic 35.0%
AAGTCAAACACAGAAGATGA+AGG - chr7_3:87224021-87224040 Msa1133590:CDS 35.0%
!!! ATGAATAAGCTTTTGGAACC+AGG - chr7_3:87224199-87224218 Msa1133590:CDS 35.0%
ACAATATGATCTACCAATCC+TGG + chr7_3:87224220-87224239 None:intergenic 35.0%
! TATCTGGGCAACATTTTTGT+CGG + chr7_3:87224248-87224267 None:intergenic 35.0%
TTCGTTTCTGTTTGATTACG+AGG + chr7_3:87224286-87224305 None:intergenic 35.0%
TTCGTTTCTGTTTGATTACG+AGG + chr7_3:87224286-87224305 None:intergenic 35.0%
TTCGTATCTGTTTGATTACG+AGG + chr7_3:87224340-87224359 None:intergenic 35.0%
!! TCTGTTTCTGTTTGATTACG+AGG + chr7_3:87224367-87224386 None:intergenic 35.0%
CGTAATCAAACAGAAACAGA+CGG - chr7_3:87224367-87224386 Msa1133590:intron 35.0%
!! TGGGAATGTCTTTACTTTTG+AGG - chr7_3:87224450-87224469 Msa1133590:intron 35.0%
TTTCTCATCTATATGGTTGC+CGG - chr7_3:87224601-87224620 Msa1133590:CDS 35.0%
!!! CCTTTTGGAGTCTTTAACAT+CGG - chr7_3:87224634-87224653 Msa1133590:CDS 35.0%
!!! AAGAGCACCTTTTGGAATTT+TGG + chr7_3:87224953-87224972 None:intergenic 35.0%
!!! TGCAGTTGCTTTTGCTAAAA+GGG + chr7_3:87225004-87225023 None:intergenic 35.0%
! TTTTAGCAAAAGCAACTGCA+GGG - chr7_3:87225004-87225023 Msa1133590:CDS 35.0%
!! CAGTTCTAAGAAATCAGAAC+CGG + chr7_3:87225058-87225077 None:intergenic 35.0%
! TTAGAACTGTTTGTTGGTGT+TGG - chr7_3:87225069-87225088 Msa1133590:CDS 35.0%
! GAAACTTGTTTAAGGAAGCA+AGG - chr7_3:87225106-87225125 Msa1133590:CDS 35.0%
TGAAATTGATGCAATTGGTC+GGG - chr7_3:87225158-87225177 Msa1133590:exon 35.0%
! AAATCAATTGTTGGTGGAGA+TGG - chr7_3:87225233-87225252 Msa1133590:five_prime_UTR 35.0%
AAAGTAACTATTGTTCCTCG+CGG - chr7_3:87225711-87225730 Msa1133590:intron 35.0%
! CAAAGGAACAACTTTTCGAT+AGG - chr7_3:87225787-87225806 Msa1133590:intron 35.0%
TACTTGAGCATATGTCATCT+TGG + chr7_3:87225901-87225920 None:intergenic 35.0%
! TTTTTCGCTGAAACCATAGA+CGG + chr7_3:87225925-87225944 None:intergenic 35.0%
TATGGTTTCAGCGAAAAAGT+GGG - chr7_3:87225927-87225946 Msa1133590:intron 35.0%
AAACCATACAGCAACAAAAC+TGG - chr7_3:87225993-87226012 Msa1133590:intron 35.0%
!! TTGATAATGAAGTGCGAGAA+TGG - chr7_3:87226024-87226043 Msa1133590:intron 35.0%
! TGATAATGAAGTGCGAGAAT+GGG - chr7_3:87226025-87226044 Msa1133590:intron 35.0%
GAAGCTTATAGAGAAAGAGA+AGG - chr7_3:87226073-87226092 Msa1133590:intron 35.0%
TTGGGCAGACATTATTTACC+CGG + chr7_3:87223426-87223445 None:intergenic 40.0%
GTAGTGGCTTAATTGGAATG+AGG - chr7_3:87223542-87223561 Msa1133590:CDS 40.0%
!! TGGCAAGCATTTTAGTAAGC+TGG - chr7_3:87223669-87223688 Msa1133590:CDS 40.0%
! AAGCTGGTTTCGATTCTCTA+AGG - chr7_3:87223685-87223704 Msa1133590:CDS 40.0%
!! GATTCTCTAAGGCTAGGATA+GGG - chr7_3:87223696-87223715 Msa1133590:CDS 40.0%
GATTTGTGTTGGAGTTGTTG+CGG - chr7_3:87223754-87223773 Msa1133590:CDS 40.0%
CAGTATCAAGAACAATGGAG+TGG + chr7_3:87223899-87223918 None:intergenic 40.0%
CAAACACAGAAGATGAAGGA+AGG - chr7_3:87224025-87224044 Msa1133590:CDS 40.0%
ATGGCGATGATACTGATGAT+GGG - chr7_3:87224109-87224128 Msa1133590:CDS 40.0%
!!! TAAGCTTTTGGAACCAGGAT+TGG - chr7_3:87224204-87224223 Msa1133590:CDS 40.0%
CCAGCCAATTTCAGAAGAAT+AGG + chr7_3:87224536-87224555 None:intergenic 40.0%
!! CCTATTCTTCTGAAATTGGC+TGG - chr7_3:87224533-87224552 Msa1133590:CDS 40.0%
GAATGAATGTCAAGAACTCC+AGG + chr7_3:87224561-87224580 None:intergenic 40.0%
CCGATGTTAAAGACTCCAAA+AGG + chr7_3:87224637-87224656 None:intergenic 40.0%
AGACAAAGACGCCAAAAACA+AGG - chr7_3:87224678-87224697 Msa1133590:CDS 40.0%
!! TATTTTAGGGAGTTGTGGTG+TGG - chr7_3:87224757-87224776 Msa1133590:CDS 40.0%
GGTATTTCTTAGGACTCTTG+AGG + chr7_3:87224918-87224937 None:intergenic 40.0%
CCAAGCTCTTGGTATTTCTT+AGG + chr7_3:87224928-87224947 None:intergenic 40.0%
CCTAAGAAATACCAAGAGCT+TGG - chr7_3:87224925-87224944 Msa1133590:CDS 40.0%
!! CTTGGTGCCAAAATTCCAAA+AGG - chr7_3:87224943-87224962 Msa1133590:CDS 40.0%
!! AATTCCAAAAGGTGCTCTTC+TGG - chr7_3:87224954-87224973 Msa1133590:CDS 40.0%
!!! CTGCAGTTGCTTTTGCTAAA+AGG + chr7_3:87225005-87225024 None:intergenic 40.0%
! CTTTTAGCAAAAGCAACTGC+AGG - chr7_3:87225003-87225022 Msa1133590:CDS 40.0%
TTTAGCAAAAGCAACTGCAG+GGG - chr7_3:87225005-87225024 Msa1133590:CDS 40.0%
!! GTGCCATTTCTCTCAATATC+CGG - chr7_3:87225036-87225055 Msa1133590:CDS 40.0%
GAACCGGATATTGAGAGAAA+TGG + chr7_3:87225042-87225061 None:intergenic 40.0%
! AGGGCTTTGTCTAATACATC+AGG + chr7_3:87225309-87225328 None:intergenic 40.0%
GTGAATAATATGAAGGCTCG+TGG + chr7_3:87225434-87225453 None:intergenic 40.0%
ATTTCGAGGCAGCTATTGAT+AGG - chr7_3:87225565-87225584 Msa1133590:intron 40.0%
GCAGCTATTGATAGGATCAT+TGG - chr7_3:87225573-87225592 Msa1133590:intron 40.0%
GCTATTGATAGGATCATTGG+TGG - chr7_3:87225576-87225595 Msa1133590:intron 40.0%
! TGATAGGATCATTGGTGGTT+TGG - chr7_3:87225581-87225600 Msa1133590:intron 40.0%
! TGGTTTGGAGAAGAAGAACA+AGG - chr7_3:87225596-87225615 Msa1133590:intron 40.0%
GTTCTCATTCGGAACATACT+GGG + chr7_3:87225757-87225776 None:intergenic 40.0%
GTCATGAGAAGGTTCTCATT+CGG + chr7_3:87225768-87225787 None:intergenic 40.0%
TGAGAACCTTCTCATGACAA+AGG - chr7_3:87225770-87225789 Msa1133590:intron 40.0%
GTTGTTCCTTTGTCATGAGA+AGG + chr7_3:87225779-87225798 None:intergenic 40.0%
CTCATTGGAACAATCTCTAC+AGG - chr7_3:87225849-87225868 Msa1133590:intron 40.0%
CTATGGTTTCAGCGAAAAAG+TGG - chr7_3:87225926-87225945 Msa1133590:intron 40.0%
! CTAACGAGTCCTCTTTTTGA+GGG + chr7_3:87225965-87225984 None:intergenic 40.0%
! TCTAACGAGTCCTCTTTTTG+AGG + chr7_3:87225966-87225985 None:intergenic 40.0%
AGATTGGAAGCAAGTCATCT+TGG + chr7_3:87226148-87226167 None:intergenic 40.0%
!! AGATGACTTGCTTCCAATCT+TGG - chr7_3:87226148-87226167 Msa1133590:intron 40.0%
!! GATGACTTGCTTCCAATCTT+GGG - chr7_3:87226149-87226168 Msa1133590:intron 40.0%
GGTGATTCAGTACTCTTGAA+GGG + chr7_3:87226182-87226201 None:intergenic 40.0%
TGGTGATTCAGTACTCTTGA+AGG + chr7_3:87226183-87226202 None:intergenic 40.0%
ACCAATTATGATAGAGCCTG+AGG - chr7_3:87226199-87226218 Msa1133590:intron 40.0%
ACCTCAGGCTCTATCATAAT+TGG + chr7_3:87226203-87226222 None:intergenic 40.0%
ACTGAGGTTAGAGAGGAGTA+AGG + chr7_3:87222697-87222716 None:intergenic 45.0%
GGGTGAAAACAGCAGAATTG+AGG - chr7_3:87223170-87223189 Msa1133590:CDS 45.0%
GGCCAAACTCAGGATTAAGA+GGG + chr7_3:87223405-87223424 None:intergenic 45.0%
CTCTTAATCCTGAGTTTGGC+CGG - chr7_3:87223404-87223423 Msa1133590:CDS 45.0%
TCTTAATCCTGAGTTTGGCC+GGG - chr7_3:87223405-87223424 Msa1133590:CDS 45.0%
TTATTTACCCGGCCAAACTC+AGG + chr7_3:87223415-87223434 None:intergenic 45.0%
!! GGTTTCGATTCTCTAAGGCT+AGG - chr7_3:87223690-87223709 Msa1133590:CDS 45.0%
!! CGATTCTCTAAGGCTAGGAT+AGG - chr7_3:87223695-87223714 Msa1133590:CDS 45.0%
CTAGGATAGGGCTATCTAGT+TGG - chr7_3:87223708-87223727 Msa1133590:CDS 45.0%
GAAGAAAGGGAGATTAGCAG+TGG + chr7_3:87223861-87223880 None:intergenic 45.0%
CTGTGGAAGGAAGGAAGAAA+GGG + chr7_3:87223874-87223893 None:intergenic 45.0%
ACTGTGGAAGGAAGGAAGAA+AGG + chr7_3:87223875-87223894 None:intergenic 45.0%
AGAACAATGGAGTGGAACTG+TGG + chr7_3:87223891-87223910 None:intergenic 45.0%
AGAATTTCGCACCCCATTGT+CGG - chr7_3:87224081-87224100 Msa1133590:CDS 45.0%
GATGGCGATGATACTGATGA+TGG - chr7_3:87224108-87224127 Msa1133590:CDS 45.0%
! TGGCGATGATACTGATGATG+GGG - chr7_3:87224110-87224129 Msa1133590:CDS 45.0%
AGAGAGAGCTCAAATAGCAC+TGG - chr7_3:87224480-87224499 Msa1133590:CDS 45.0%
GAGAGAGCTCAAATAGCACT+GGG - chr7_3:87224481-87224500 Msa1133590:CDS 45.0%
CATTCAACACCTGTTGCCTT+TGG - chr7_3:87224576-87224595 Msa1133590:CDS 45.0%
TGAGAAATGCCAAAGGCAAC+AGG + chr7_3:87224588-87224607 None:intergenic 45.0%
TATATGGTTGCCGGTGGTAA+GGG - chr7_3:87224610-87224629 Msa1133590:CDS 45.0%
ACGCCAAAAACAAGGTTCGT+TGG - chr7_3:87224686-87224705 Msa1133590:CDS 45.0%
CGCCAAAAACAAGGTTCGTT+GGG - chr7_3:87224687-87224706 Msa1133590:CDS 45.0%
GCCAAAAACAAGGTTCGTTG+GGG - chr7_3:87224688-87224707 Msa1133590:CDS 45.0%
!! GAATTTTGGCACCAAGCTCT+TGG + chr7_3:87224939-87224958 None:intergenic 45.0%
! CAATTGTTGGTGGAGATGGA+TGG - chr7_3:87225237-87225256 Msa1133590:five_prime_UTR 45.0%
ACAAAGCCCTACTTAGACCA+GGG - chr7_3:87225319-87225338 Msa1133590:intron 45.0%
AAAACGCCCTGGTCTAAGTA+GGG + chr7_3:87225328-87225347 None:intergenic 45.0%
TCCAGCAAATCCTGGAGTAA+GGG + chr7_3:87225469-87225488 None:intergenic 45.0%
CGTCACACATGATCATTTCG+AGG - chr7_3:87225551-87225570 Msa1133590:intron 45.0%
ACCTGCTTCATGGTAAGCAA+CGG + chr7_3:87225646-87225665 None:intergenic 45.0%
TATTGTTCCTCGCGGATCAT+CGG - chr7_3:87225719-87225738 Msa1133590:intron 45.0%
GGTTCTCATTCGGAACATAC+TGG + chr7_3:87225758-87225777 None:intergenic 45.0%
GATAGGACTTGTATGACCCT+TGG - chr7_3:87225804-87225823 Msa1133590:intron 45.0%
TGTTCCAATGAGAACCTGCT+CGG + chr7_3:87225841-87225860 None:intergenic 45.0%
! TACAGGAGCACAAGATGACT+TGG - chr7_3:87225866-87225885 Msa1133590:intron 45.0%
TATGCTCAAGTAGCCGTCTA+TGG - chr7_3:87225909-87225928 Msa1133590:intron 45.0%
!! CTTTTTGAGGGAAAGAGAGG+AGG + chr7_3:87225953-87225972 None:intergenic 45.0%
!! CCTCTTTTTGAGGGAAAGAG+AGG + chr7_3:87225956-87225975 None:intergenic 45.0%
CCTCTCTTTCCCTCAAAAAG+AGG - chr7_3:87225953-87225972 Msa1133590:intron 45.0%
!!! GCACCAGTTTTGTTGCTGTA+TGG + chr7_3:87225999-87226018 None:intergenic 45.0%
TAATGAAGTGCGAGAATGGG+TGG - chr7_3:87226028-87226047 Msa1133590:intron 45.0%
GGAGAAAGTAGCTCAACTTG+CGG - chr7_3:87226094-87226113 Msa1133590:intron 45.0%
CAACTATGTGGAACAACCTC+AGG + chr7_3:87226218-87226237 None:intergenic 45.0%
!! TATAAATATTATTTCAATAT+TGG - chr7_3:87224430-87224449 Msa1133590:intron 5.0%
!! ATAAATATTATTTCAATATT+GGG - chr7_3:87224431-87224450 Msa1133590:intron 5.0%
!!! ATTTTTTATATTTGTATTTT+AGG - chr7_3:87224743-87224762 Msa1133590:CDS 5.0%
!!! TTTTTTATATTTGTATTTTA+GGG - chr7_3:87224744-87224763 Msa1133590:CDS 5.0%
TCCTCTCTAACCTCAGTCTC+CGG - chr7_3:87222700-87222719 Msa1133590:three_prime_UTR 50.0%
GGCCCTCTTAATCCTGAGTT+TGG - chr7_3:87223400-87223419 Msa1133590:CDS 50.0%
CGGCCAAACTCAGGATTAAG+AGG + chr7_3:87223406-87223425 None:intergenic 50.0%
GAAAGGGAGATTAGCAGTGG+CGG + chr7_3:87223858-87223877 None:intergenic 50.0%
CAATGGAGTGGAACTGTGGA+AGG + chr7_3:87223887-87223906 None:intergenic 50.0%
!! GCAGCAGCAGATTAGCTTTC+AGG - chr7_3:87224171-87224190 Msa1133590:CDS 50.0%
AGAAGAAACCCTTCCTGCGA+AGG - chr7_3:87224393-87224412 Msa1133590:intron 50.0%
GAAGAAACCCTTCCTGCGAA+GGG - chr7_3:87224394-87224413 Msa1133590:intron 50.0%
ACCATATCCCTTCGCAGGAA+GGG + chr7_3:87224404-87224423 None:intergenic 50.0%
TTCCTGCGAAGGGATATGGT+GGG - chr7_3:87224404-87224423 Msa1133590:intron 50.0%
!! TTCTGAAATTGGCTGGCACC+TGG - chr7_3:87224540-87224559 Msa1133590:CDS 50.0%
CTCATCTATATGGTTGCCGG+TGG - chr7_3:87224604-87224623 Msa1133590:CDS 50.0%
CTATATGGTTGCCGGTGGTA+AGG - chr7_3:87224609-87224628 Msa1133590:CDS 50.0%
TCCAAAAGGACCCTTACCAC+CGG + chr7_3:87224623-87224642 None:intergenic 50.0%
!!! GCCCCAACGAACCTTGTTTT+TGG + chr7_3:87224692-87224711 None:intergenic 50.0%
! AGATGTTGCTGGCTGTGATG+AGG - chr7_3:87224861-87224880 Msa1133590:CDS 50.0%
!! TCCAAAAGGTGCTCTTCTGG+TGG - chr7_3:87224957-87224976 Msa1133590:CDS 50.0%
!! CCAAAAGGTGCTCTTCTGGT+GGG - chr7_3:87224958-87224977 Msa1133590:CDS 50.0%
AAAGCAACTGCAGGGGAATC+TGG - chr7_3:87225012-87225031 Msa1133590:CDS 50.0%
TTGATGCAATTGGTCGGGCA+AGG - chr7_3:87225163-87225182 Msa1133590:exon 50.0%
TGATGCAATTGGTCGGGCAA+GGG - chr7_3:87225164-87225183 Msa1133590:exon 50.0%
TTGGTGGAGATGGATGGCTT+TGG - chr7_3:87225243-87225262 Msa1133590:five_prime_UTR 50.0%
GACAAAGCCCTACTTAGACC+AGG - chr7_3:87225318-87225337 Msa1133590:intron 50.0%
CAAAACGCCCTGGTCTAAGT+AGG + chr7_3:87225329-87225348 None:intergenic 50.0%
TGGTCACGACCTTTGATGTC+AGG + chr7_3:87225375-87225394 None:intergenic 50.0%
AAGCTTGCATCCCTTACTCC+AGG - chr7_3:87225456-87225475 Msa1133590:intron 50.0%
TCCCTTACTCCAGGATTTGC+TGG - chr7_3:87225465-87225484 Msa1133590:intron 50.0%
CTCCAGCAAATCCTGGAGTA+AGG + chr7_3:87225470-87225489 None:intergenic 50.0%
!! TACTCCAGGATTTGCTGGAG+CGG - chr7_3:87225470-87225489 Msa1133590:intron 50.0%
ATATCCGCTCCAGCAAATCC+TGG + chr7_3:87225477-87225496 None:intergenic 50.0%
AAGCTGCTCTGATTGCTGCA+AGG - chr7_3:87225514-87225533 Msa1133590:intron 50.0%
ACCGTTGCTTACCATGAAGC+AGG - chr7_3:87225642-87225661 Msa1133590:intron 50.0%
CAACAGCATGACCTGCTTCA+TGG + chr7_3:87225656-87225675 None:intergenic 50.0%
!! TGCTGTTGCAGGTTGGTTCT+TGG - chr7_3:87225668-87225687 Msa1133590:intron 50.0%
AGGACTTGTATGACCCTTGG+TGG - chr7_3:87225807-87225826 Msa1133590:intron 50.0%
! CTTGTATGACCCTTGGTGGT+CGG - chr7_3:87225811-87225830 Msa1133590:intron 50.0%
! TTGTATGACCCTTGGTGGTC+GGG - chr7_3:87225812-87225831 Msa1133590:intron 50.0%
ACCGGAGACTGAGGTTAGAG+AGG + chr7_3:87222704-87222723 None:intergenic 55.0%
CTAACCTCAGTCTCCGGTGA+CGG - chr7_3:87222706-87222725 Msa1133590:three_prime_UTR 55.0%
ACGACATCGCACAGTCTCAC+CGG - chr7_3:87222745-87222764 Msa1133590:three_prime_UTR 55.0%
TCTGTTGTCGCGACTGAGAG+AGG + chr7_3:87222794-87222813 None:intergenic 55.0%
GGAGTGGAACTGTGGAAGGA+AGG + chr7_3:87223883-87223902 None:intergenic 55.0%
ATTTCGCACCCCATTGTCGG+CGG - chr7_3:87224084-87224103 Msa1133590:CDS 55.0%
ACCCTTCCTGCGAAGGGATA+TGG - chr7_3:87224400-87224419 Msa1133590:intron 55.0%
CACCATATCCCTTCGCAGGA+AGG + chr7_3:87224405-87224424 None:intergenic 55.0%
CTTCCTGCGAAGGGATATGG+TGG - chr7_3:87224403-87224422 Msa1133590:intron 55.0%
!!! CCCACCAGAAGAGCACCTTT+TGG + chr7_3:87224961-87224980 None:intergenic 55.0%
AAAAGGGTCTTCCCTGTGCC+TGG + chr7_3:87224988-87225007 None:intergenic 55.0%
GATGCAATTGGTCGGGCAAG+GGG - chr7_3:87225165-87225184 Msa1133590:exon 55.0%
!! GATGGCTTTGGAACCACTGC+TGG - chr7_3:87225255-87225274 Msa1133590:intron 55.0%
CAGCACAACAACTCCAGCAG+TGG + chr7_3:87225271-87225290 None:intergenic 55.0%
CACTGCTGGAGTTGTTGTGC+TGG - chr7_3:87225269-87225288 Msa1133590:intron 55.0%
ATTTGGCGGTCAAAACGCCC+TGG + chr7_3:87225339-87225358 None:intergenic 55.0%
GAAGCAGGTCATGCTGTTGC+AGG - chr7_3:87225657-87225676 Msa1133590:intron 55.0%
CAGGTCATGCTGTTGCAGGT+TGG - chr7_3:87225661-87225680 Msa1133590:intron 55.0%
AAGGGTCGCACACCCAAGAT+TGG + chr7_3:87226164-87226183 None:intergenic 55.0%
GGTGAGACTGTGCGATGTCG+TGG + chr7_3:87222746-87222765 None:intergenic 60.0%
ATCGCACAGTCTCACCGGTG+CGG - chr7_3:87222750-87222769 Msa1133590:three_prime_UTR 60.0%
TGCCCACCATATCCCTTCGC+AGG + chr7_3:87224409-87224428 None:intergenic 60.0%
! GCCGGTGGTAAGGGTCCTTT+TGG - chr7_3:87224619-87224638 Msa1133590:CDS 60.0%
! GCTGGAGTTGTTGTGCTGGC+AGG - chr7_3:87225273-87225292 Msa1133590:intron 60.0%
!! CTCGCGGATCATCGGCTCTT+GGG - chr7_3:87225727-87225746 Msa1133590:intron 60.0%
GCTGCCGAGCAGGTTCTCAT+TGG - chr7_3:87225834-87225853 Msa1133590:intron 60.0%
! TCAGTCTCCGGTGACGGCGA+CGG - chr7_3:87222712-87222731 Msa1133590:three_prime_UTR 65.0%
TCGCCATCGCCGCCGACAAT+GGG + chr7_3:87224096-87224115 None:intergenic 65.0%
ATCGCCATCGCCGCCGACAA+TGG + chr7_3:87224097-87224116 None:intergenic 65.0%
! GCTCTTCTGGTGGGTCCTCC+AGG - chr7_3:87224967-87224986 Msa1133590:CDS 65.0%
! TGGTGGGTCCTCCAGGCACA+GGG - chr7_3:87224974-87224993 Msa1133590:CDS 65.0%
AGGGTCTTCCCTGTGCCTGG+AGG + chr7_3:87224985-87225004 None:intergenic 65.0%
GGTCGGGCAAGGGGTAGTAG+AGG - chr7_3:87225174-87225193 Msa1133590:exon 65.0%
CGGGCAAGGGGTAGTAGAGG+CGG - chr7_3:87225177-87225196 Msa1133590:five_prime_UTR 65.0%
CCAAGAGCCGATGATCCGCG+AGG + chr7_3:87225729-87225748 None:intergenic 65.0%
!! CCTCGCGGATCATCGGCTCT+TGG - chr7_3:87225726-87225745 Msa1133590:intron 65.0%
GTCGCCGTCACCGGAGACTG+AGG + chr7_3:87222713-87222732 None:intergenic 70.0%
CACCCCATTGTCGGCGGCGA+TGG - chr7_3:87224090-87224109 Msa1133590:CDS 70.0%
CGCCATCGCCGCCGACAATG+GGG + chr7_3:87224095-87224114 None:intergenic 70.0%
! CTGGTGGGTCCTCCAGGCAC+AGG - chr7_3:87224973-87224992 Msa1133590:CDS 70.0%
CTCGGCAGCCCGACCACCAA+GGG + chr7_3:87225823-87225842 None:intergenic 70.0%
TCGCTCACGCGTCGCCGCAC+CGG + chr7_3:87222767-87222786 None:intergenic 75.0%
GCTCGGCAGCCCGACCACCA+AGG + chr7_3:87225824-87225843 None:intergenic 75.0%
TGGTGGTCGGGCTGCCGAGC+AGG - chr7_3:87225824-87225843 Msa1133590:intron 75.0%
!! CTCCGGTGACGGCGACGGCG+AGG - chr7_3:87222717-87222736 Msa1133590:three_prime_UTR 80.0%
! CGCCTCGCCGTCGCCGTCAC+CGG + chr7_3:87222722-87222741 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 87222672 87226484 87222672 ID=Msa1133590;Name=Msa1133590
chr7_3 mRNA 87222672 87226484 87222672 ID=Msa1133590-mRNA-1;Parent=Msa1133590;Name=Msa1133590-mRNA-1;_AED=0.08;_eAED=0.08;_QI=310|1|1|1|0.5|0.33|3|246|702
chr7_3 exon 87222672 87224306 87222672 ID=Msa1133590-mRNA-1:exon:26239;Parent=Msa1133590-mRNA-1
chr7_3 exon 87224457 87225262 87224457 ID=Msa1133590-mRNA-1:exon:26238;Parent=Msa1133590-mRNA-1
chr7_3 exon 87226261 87226484 87226261 ID=Msa1133590-mRNA-1:exon:26237;Parent=Msa1133590-mRNA-1
chr7_3 five_prime_UTR 87226261 87226484 87226261 ID=Msa1133590-mRNA-1:five_prime_utr;Parent=Msa1133590-mRNA-1
chr7_3 five_prime_UTR 87225177 87225262 87225177 ID=Msa1133590-mRNA-1:five_prime_utr;Parent=Msa1133590-mRNA-1
chr7_3 CDS 87224457 87225176 87224457 ID=Msa1133590-mRNA-1:cds;Parent=Msa1133590-mRNA-1
chr7_3 CDS 87222918 87224306 87222918 ID=Msa1133590-mRNA-1:cds;Parent=Msa1133590-mRNA-1
chr7_3 three_prime_UTR 87222672 87222917 87222672 ID=Msa1133590-mRNA-1:three_prime_utr;Parent=Msa1133590-mRNA-1
Gene Sequence

>Msa1133590

ATGGGAAACGATAAGAAAAAAACGAATCGAAAGAAGAAACAAAGTCAAACACAGAAGATGAAGGAAGGAAGCTTTCAAGAAGCATTGATGAAACAAATTCAAGAATTTCGCACCCCATTGTCGGCGGCGATGGCGATGATACTGATGATGGGGATAACTCTTTCTATCTTATATTTTGATACTGGGAAGCAGCAGCAGCAGATTAGCTTTCAGGAGTTTATGAATAAGCTTTTGGAACCAGGATTGGTAGATCATATTGTTGTCTCCGACAAAAATGTTGCCCAGATATATGTTTTGAACTCTCCTCGTAATCAAACAGAAACGAACTCTCCTCGTAATCAAACAGAAACGAACTCTCCTCGTAATCAAACAGATACGAACTCTCCTCGTAATCAAACAGAAACAGACGGTGAAGAAGAAACCCTTCCTGCGAAGGGATATGGTGGGCAATATAAATATTATTTCAATATTGGGAATGTCTTTACTTTTGAGGAGAAATTAGAGAGAGCTCAAATAGCACTGGGTGTTGACCATCATGATTTTGTACCTGTTACCTATTCTTCTGAAATTGGCTGGCACCTGGAGTTCTTGACATTCATTCAACACCTGTTGCCTTTGGCATTTCTCATCTATATGGTTGCCGGTGGTAAGGGTCCTTTTGGAGTCTTTAACATCGGAAAACCACATTTTACTAAAGTAGACAAAGACGCCAAAAACAAGGTCTATTTTAAAGATGTTGCTGGCTGTGATGAGGCAAAACAAGAAATTATGGAGTTTGTGCACTTCCTCAAGAGTCCTAAGAAATACCAAGAGCTTGGTGCCAAAATTCCAAAAGGTGCTCTTCTGGTGGGTCCTCCAGGCACAGGGAAGACCCTTTTAGCAAAAGCAACTGCAGGGGAATCTGGTGTGCCATTTCTCTCAATATCCGGTTCTGATTTCTTAGAACTGTTTGTTGGTGTTGGATCATCTAGAGTGAGAAACTTGTTTAAGGAAGCAAGGAAGTGTGCTCCTAGTATAGTATTTATTGATGAAATTGATGCAATTGGTCGGGCAAGGGGTAGTAGAGGCGGAGATCGTGCAAATGATGAACGTGAAAGTACTTTAAATCAATTGTTGGTGGAGATGGATGGCTTTGGAACCACTGCTGGAGTTGTTGTGCTGGCAGGTACAAATAGACCTGATGTATTAGACAAAGCCCTACTTAGACCAGGGCGTTTTGACCGCCAAATAACAATTGATAAACCTGACATCAAAGGTCGTGACCAGATATTTCAGATTTACTTGAAAGGGATCAAACTTGACCACGAGCCTTCATATTATTCACGTAAGCTTGCATCCCTTACTCCAGGATTTGCTGGAGCGGATATTGCTAATGTTTGCAATGAAGCTGCTCTGATTGCTGCAAGGACTGATGAAGCACACGTCACACATGATCATTTCGAGGCAGCTATTGATAGGATCATTGGTGGTTTGGAGAAGAAGAACAAGGTAATAAGTAAGCTGCAAAGACGCACCGTTGCTTACCATGAAGCAGGTCATGCTGTTGCAGGTTGGTTCTTGGAACATACTGACCCATTGTTGAAAGTAACTATTGTTCCTCGCGGATCATCGGCTCTTGGGTTTGCCCAGTATGTTCCGAATGAGAACCTTCTCATGACAAAGGAACAACTTTTCGATAGGACTTGTATGACCCTTGGTGGTCGGGCTGCCGAGCAGGTTCTCATTGGAACAATCTCTACAGGAGCACAAGATGACTTGGAGAAAGTTACCAAGATGACATATGCTCAAGTAGCCGTCTATGGTTTCAGCGAAAAAGTGGGCCTCCTCTCTTTCCCTCAAAAAGAGGACTCGTTAGAGATGTCTAAACCATACAGCAACAAAACTGGTGCAATCATTGATAATGAAGTGCGAGAATGGGTGGACAAAGCATATGAACGTACTGTGAAGCTTATAGAGAAAGAGAAGGAGAAAGTAGCTCAACTTGCGGAGTTGCTGCTTGAAAAAGAAGTTCTTCACCAAGATGACTTGCTTCCAATCTTGGGTGTGCGACCCTTCAAGAGTACTGAATCACCAATTATGATAGAGCCTGAGGTTGTTCCACATAGTTGA
Protein sequence

>Msa1133590

MGNDKKKTNRKKKQSQTQKMKEGSFQEALMKQIQEFRTPLSAAMAMILMMGITLSILYFDTGKQQQQISFQEFMNKLLEPGLVDHIVVSDKNVAQIYVLNSPRNQTETNSPRNQTETNSPRNQTDTNSPRNQTETDGEEETLPAKGYGGQYKYYFNIGNVFTFEEKLERAQIALGVDHHDFVPVTYSSEIGWHLEFLTFIQHLLPLAFLIYMVAGGKGPFGVFNIGKPHFTKVDKDAKNKVYFKDVAGCDEAKQEIMEFVHFLKSPKKYQELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFLELFVGVGSSRVRNLFKEARKCAPSIVFIDEIDAIGRARGSRGGDRANDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDVLDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLKGIKLDHEPSYYSRKLASLTPGFAGADIANVCNEAALIAARTDEAHVTHDHFEAAIDRIIGGLEKKNKVISKLQRRTVAYHEAGHAVAGWFLEHTDPLLKVTIVPRGSSALGFAQYVPNENLLMTKEQLFDRTCMTLGGRAAEQVLIGTISTGAQDDLEKVTKMTYAQVAVYGFSEKVGLLSFPQKEDSLEMSKPYSNKTGAIIDNEVREWVDKAYERTVKLIEKEKEKVAQLAELLLEKEVLHQDDLLPILGVRPFKSTESPIMIEPEVVPHS*