Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0010910 | sp|Q9LTB0|EX84B_ARATH | 75.132 | 760 | 179 | 6 | 6 | 764 | 1 | 751 | 0.0 | 1082 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010910 | Msa0047640 | 0.825082 | 5.691577e-54 | -8.615850e-47 |
| Msa0010910 | Msa0052440 | 0.827886 | 1.220872e-54 | -8.615850e-47 |
| Msa0010910 | Msa0089980 | 0.826948 | 2.049581e-54 | -8.615850e-47 |
| Msa0010910 | Msa0090010 | 0.825793 | 3.861447e-54 | -8.615850e-47 |
| Msa0010910 | Msa0106620 | 0.828721 | 7.678758e-55 | -8.615850e-47 |
| Msa0010910 | Msa0106710 | 0.808168 | 3.535427e-50 | -8.615850e-47 |
| Msa0010910 | Msa0139670 | 0.802191 | 6.307231e-49 | -8.615850e-47 |
| Msa0010910 | Msa0140880 | 0.813760 | 2.173949e-51 | -8.615850e-47 |
| Msa0010910 | Msa0168570 | 0.802275 | 6.059987e-49 | -8.615850e-47 |
| Msa0010910 | Msa0177320 | 0.811172 | 7.995604e-51 | -8.615850e-47 |
| Msa0010910 | Msa0244970 | 0.805138 | 1.542644e-49 | -8.615850e-47 |
| Msa0010910 | Msa0249310 | 0.817384 | 3.391604e-52 | -8.615850e-47 |
| Msa0010910 | Msa0249360 | 0.829717 | 4.403817e-55 | -8.615850e-47 |
| Msa0010910 | Msa0266220 | 0.841827 | 3.752095e-58 | -8.615850e-47 |
| Msa0010910 | Msa0287680 | 0.849443 | 3.222706e-60 | -8.615850e-47 |
| Msa0010910 | Msa0287790 | 0.801124 | 1.043921e-48 | -8.615850e-47 |
| Msa0010910 | Msa0287850 | 0.810551 | 1.089870e-50 | -8.615850e-47 |
| Msa0010910 | Msa0333610 | 0.829747 | 4.330633e-55 | -8.615850e-47 |
| Msa0010910 | Msa0335360 | 0.804990 | 1.656976e-49 | -8.615850e-47 |
| Msa0010910 | Msa0362890 | 0.847253 | 1.299823e-59 | -8.615850e-47 |
| Msa0010910 | Msa0369420 | 0.812979 | 3.227150e-51 | -8.615850e-47 |
| Msa0010910 | Msa0376420 | 0.816778 | 4.640265e-52 | -8.615850e-47 |
| Msa0010910 | Msa0381360 | 0.814095 | 1.834678e-51 | -8.615850e-47 |
| Msa0010910 | Msa0382370 | 0.806400 | 8.378770e-50 | -8.615850e-47 |
| Msa0010910 | Msa0395980 | 0.838822 | 2.288185e-57 | -8.615850e-47 |
| Msa0010910 | Msa0422530 | 0.800162 | 1.640067e-48 | -8.615850e-47 |
| Msa0010910 | Msa0423030 | 0.800783 | 1.225749e-48 | -8.615850e-47 |
| Msa0010910 | Msa0428210 | 0.811733 | 6.041092e-51 | -8.615850e-47 |
| Msa0010910 | Msa0432160 | 0.805552 | 1.263110e-49 | -8.615850e-47 |
| Msa0010910 | Msa0438020 | 0.825283 | 5.100330e-54 | -8.615850e-47 |
| Msa0010910 | Msa0440510 | 0.838318 | 3.087188e-57 | -8.615850e-47 |
| Msa0010910 | Msa0476680 | 0.808949 | 2.408334e-50 | -8.615850e-47 |
| Msa0010910 | Msa0491000 | 0.836097 | 1.142608e-56 | -8.615850e-47 |
| Msa0010910 | Msa0516240 | 0.811724 | 6.067832e-51 | -8.615850e-47 |
| Msa0010910 | Msa0519150 | 0.826176 | 3.131702e-54 | -8.615850e-47 |
| Msa0010910 | Msa0521010 | 0.808166 | 3.539798e-50 | -8.615850e-47 |
| Msa0010910 | Msa0529670 | 0.964797 | 8.811536e-124 | -8.615850e-47 |
| Msa0010910 | Msa0534980 | 0.842349 | 2.730632e-58 | -8.615850e-47 |
| Msa0010910 | Msa0544170 | 0.814549 | 1.456121e-51 | -8.615850e-47 |
| Msa0010910 | Msa0544730 | 0.829888 | 4.001260e-55 | -8.615850e-47 |
| Msa0010910 | Msa0572750 | 0.849166 | 3.849226e-60 | -8.615850e-47 |
| Msa0010910 | Msa0586450 | 0.816522 | 5.294765e-52 | -8.615850e-47 |
| Msa0010910 | Msa0597770 | 0.811491 | 6.818258e-51 | -8.615850e-47 |
| Msa0010910 | Msa0606080 | 0.806259 | 8.974009e-50 | -8.615850e-47 |
| Msa0010910 | Msa0608270 | 0.825005 | 5.934404e-54 | -8.615850e-47 |
| Msa0010910 | Msa0611220 | 0.816927 | 4.297263e-52 | -8.615850e-47 |
| Msa0010910 | Msa0626270 | 0.821813 | 3.306544e-53 | -8.615850e-47 |
| Msa0010910 | Msa0626460 | 0.841946 | 3.490752e-58 | -8.615850e-47 |
| Msa0010910 | Msa0647030 | 0.804927 | 1.707853e-49 | -8.615850e-47 |
| Msa0010910 | Msa0648830 | 0.826271 | 2.973739e-54 | -8.615850e-47 |
| Msa0010910 | Msa0651560 | 0.831492 | 1.618732e-55 | -8.615850e-47 |
| Msa0010910 | Msa0664540 | 0.843617 | 1.255062e-58 | -8.615850e-47 |
| Msa0010910 | Msa0693880 | 0.811148 | 8.091703e-51 | -8.615850e-47 |
| Msa0010910 | Msa0697680 | 0.805542 | 1.269273e-49 | -8.615850e-47 |
| Msa0010910 | Msa0698100 | 0.810381 | 1.185658e-50 | -8.615850e-47 |
| Msa0010910 | Msa0702720 | 0.817000 | 4.137976e-52 | -8.615850e-47 |
| Msa0010910 | Msa0703800 | 0.807293 | 5.424344e-50 | -8.615850e-47 |
| Msa0010910 | Msa0709120 | 0.803386 | 3.573249e-49 | -8.615850e-47 |
| Msa0010910 | Msa0789560 | 0.820332 | 7.254848e-53 | -8.615850e-47 |
| Msa0010910 | Msa0790410 | 0.809335 | 1.991345e-50 | -8.615850e-47 |
| Msa0010910 | Msa0907850 | 0.801730 | 7.845354e-49 | -8.615850e-47 |
| Msa0010910 | Msa0933760 | 0.823775 | 1.155328e-53 | -8.615850e-47 |
| Msa0010910 | Msa0959520 | 0.821691 | 3.528856e-53 | -8.615850e-47 |
| Msa0010910 | Msa0971650 | 0.815004 | 1.154183e-51 | -8.615850e-47 |
| Msa0010910 | Msa0985180 | 0.808681 | 2.748409e-50 | -8.615850e-47 |
| Msa0010910 | Msa0985220 | 0.833263 | 5.896442e-56 | -8.615850e-47 |
| Msa0010910 | Msa0995370 | 0.814709 | 1.342102e-51 | -8.615850e-47 |
| Msa0010910 | Msa1089960 | 0.997887 | 2.651957e-251 | -8.615850e-47 |
| Msa0010910 | Msa1131090 | 0.812797 | 3.538574e-51 | -8.615850e-47 |
| Msa0010910 | Msa1136960 | 0.866591 | 2.549757e-65 | -8.615850e-47 |
| Msa0010910 | Msa1161480 | 0.837234 | 5.861832e-57 | -8.615850e-47 |
| Msa0010910 | Msa1208990 | 0.803745 | 3.010377e-49 | -8.615850e-47 |
| Msa0010910 | Msa1234620 | 0.803719 | 3.048677e-49 | -8.615850e-47 |
| Msa0010910 | Msa1236440 | 0.803511 | 3.366835e-49 | -8.615850e-47 |
| Msa0010910 | Msa1254620 | 0.810304 | 1.231790e-50 | -8.615850e-47 |
| Msa0010910 | Msa1298100 | 0.826074 | 3.311622e-54 | -8.615850e-47 |
| Msa0010910 | Msa1299910 | 0.814283 | 1.667079e-51 | -8.615850e-47 |
| Msa0010910 | Msa1327870 | 0.816597 | 5.095668e-52 | -8.615850e-47 |
| Msa0010910 | Msa1339150 | 0.822182 | 2.716592e-53 | -8.615850e-47 |
| Msa0010910 | Msa1340200 | 0.826757 | 2.276886e-54 | -8.615850e-47 |
| Msa0010910 | Msa1341840 | 0.800973 | 1.120889e-48 | -8.615850e-47 |
| Msa0010910 | Msa1350700 | 0.834814 | 2.410980e-56 | -8.615850e-47 |
| Msa0010910 | Msa1360260 | 0.847422 | 1.168000e-59 | -8.615850e-47 |
| Msa0010910 | Msa1366550 | 0.842492 | 2.501466e-58 | -8.615850e-47 |
| Msa0010910 | Msa1392210 | 0.801149 | 1.031610e-48 | -8.615850e-47 |
| Msa0010910 | Msa1393820 | 0.824760 | 6.776785e-54 | -8.615850e-47 |
| Msa0010910 | Msa1411000 | 0.840080 | 1.078128e-57 | -8.615850e-47 |
| Msa0010910 | Msa1411980 | 0.812217 | 4.736571e-51 | -8.615850e-47 |
| Msa0010910 | Msa1414500 | 0.971053 | 1.462847e-132 | -8.615850e-47 |
| Msa0010910 | Msa1429580 | 0.804498 | 2.098554e-49 | -8.615850e-47 |
| Msa0010910 | Msa1440900 | 0.803094 | 4.107226e-49 | -8.615850e-47 |
| Msa0010910 | Msa1443310 | 0.809391 | 1.936368e-50 | -8.615850e-47 |
| Msa0010910 | Msa1461370 | 0.829429 | 5.172899e-55 | -8.615850e-47 |
| Msa0010910 | Msa1463030 | 0.843898 | 1.055596e-58 | -8.615850e-47 |
| Msa0010910 | Msa1464090 | 0.822261 | 2.604386e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0010910 | MtrunA17_Chr4g0000541 | 98.952 | 763 | 8 | 0 | 3 | 765 | 2 | 764 | 0.0 | 1546 |
| Msa0010910 | MtrunA17_Chr6g0471001 | 57.278 | 742 | 292 | 11 | 25 | 753 | 31 | 760 | 0.0 | 826 |
| Msa0010910 | MtrunA17_Chr1g0210011 | 57.617 | 663 | 254 | 10 | 88 | 732 | 4 | 657 | 0.0 | 695 |
| Msa0010910 | MtrunA17_Chr4g0043561 | 35.396 | 695 | 425 | 10 | 50 | 731 | 28 | 711 | 2.39e-128 | 400 |
| Msa0010910 | MtrunA17_Chr1g0183451 | 25.470 | 691 | 476 | 14 | 50 | 731 | 61 | 721 | 1.84e-62 | 225 |
| Msa0010910 | MtrunA17_Chr1g0210001 | 59.701 | 67 | 26 | 1 | 22 | 87 | 24 | 90 | 5.44e-18 | 79.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0010910 | AT5G49830.1 | 75.132 | 760 | 179 | 6 | 6 | 764 | 1 | 751 | 0.0 | 1082 |
| Msa0010910 | AT5G49830.3 | 72.314 | 791 | 178 | 7 | 6 | 764 | 1 | 782 | 0.0 | 1066 |
| Msa0010910 | AT5G49830.2 | 75.978 | 716 | 164 | 5 | 50 | 764 | 105 | 813 | 0.0 | 1030 |
| Msa0010910 | AT1G10385.1 | 61.404 | 741 | 275 | 8 | 22 | 758 | 20 | 753 | 0.0 | 882 |
| Msa0010910 | AT1G10180.1 | 35.423 | 686 | 426 | 8 | 50 | 731 | 28 | 700 | 9.05e-128 | 399 |
Find 173 sgRNAs with CRISPR-Local
Find 557 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAGAAAGCTTTGAGGATTC+TGG | 0.189121 | 1_1:-16478855 | Msa0010910:CDS |
| AACAGAAGCATTTGCTCTTC+TGG | 0.230386 | 1_1:-16479852 | Msa0010910:CDS |
| AGTTGAGTTTCCTGATCTTT+TGG | 0.240158 | 1_1:-16480338 | Msa0010910:CDS |
| AAACATATCTGCTGCTATAT+TGG | 0.247414 | 1_1:+16477296 | None:intergenic |
| CTCTCCCCGTTTATTTCCTT+TGG | 0.259208 | 1_1:+16475639 | None:intergenic |
| CCTTACAGGAATCTTGGTTT+AGG | 0.259751 | 1_1:+16478721 | None:intergenic |
| TCTTCTTCGTCCATTGATTC+TGG | 0.265720 | 1_1:+16478873 | None:intergenic |
| TTTCAGAAGATCAGAGCTTT+TGG | 0.266073 | 1_1:-16477209 | Msa0010910:CDS |
| TCTACGGTTATCATCCTTAC+AGG | 0.270886 | 1_1:+16478707 | None:intergenic |
| ATTGGACTGTACTAATTTAC+AGG | 0.283078 | 1_1:+16475529 | None:intergenic |
| CTCCTCCATTCCCGTTGTTC+AGG | 0.299705 | 1_1:+16478657 | None:intergenic |
| CTTACAGGAATCTTGGTTTA+GGG | 0.300947 | 1_1:+16478722 | None:intergenic |
| TGCCCATCGCTTCAATTTGA+TGG | 0.308622 | 1_1:-16479531 | Msa0010910:CDS |
| CAACATTGAATGAATTGAAT+TGG | 0.310488 | 1_1:+16484414 | None:intergenic |
| TCGCTTCAATTTGATGGTTC+AGG | 0.316321 | 1_1:-16479525 | Msa0010910:intron |
| CTATGGCTGCTGCTGATGAT+TGG | 0.319105 | 1_1:-16479628 | Msa0010910:CDS |
| GCTAGCTAATGCCTCATTAC+TGG | 0.329413 | 1_1:-16478784 | Msa0010910:CDS |
| TCTCCTTCGTGATCTTGTTA+TGG | 0.329633 | 1_1:-16484319 | Msa0010910:exon |
| GAGGAAGGGCCAAGGCCTTT+AGG | 0.330967 | 1_1:-16477177 | Msa0010910:CDS |
| CCAATCTATCATGAAATTAC+TGG | 0.335302 | 1_1:-16475511 | Msa0010910:three_prime_UTR |
| TCATTAAACCATTCATCTTC+AGG | 0.346274 | 1_1:+16475699 | None:intergenic |
| GCGGCGAGTGTTAAAGAAAA+TGG | 0.352110 | 1_1:-16484252 | Msa0010910:CDS |
| GTTTAGGGAGGAGAGCTTCA+TGG | 0.358778 | 1_1:+16478737 | None:intergenic |
| ATTACCGTCACCGCTTGGTT+AGG | 0.363001 | 1_1:-16484527 | None:intergenic |
| AGCTGACATGTATATAAGTA+TGG | 0.372642 | 1_1:-16478538 | Msa0010910:CDS |
| TAGCTAGCAGTGCAATCTGC+TGG | 0.380139 | 1_1:+16478799 | None:intergenic |
| TATCATCCTTACAGGAATCT+TGG | 0.382644 | 1_1:+16478715 | None:intergenic |
| AATTGCAAAACATACCTATA+CGG | 0.393334 | 1_1:+16475850 | None:intergenic |
| GAATTGTGAATGAAATTATC+AGG | 0.397966 | 1_1:-16475909 | Msa0010910:CDS |
| CCAGTAATTTCATGATAGAT+TGG | 0.398861 | 1_1:+16475511 | None:intergenic |
| CGGCCGTCAAACACCTCATA+TGG | 0.413368 | 1_1:-16480004 | Msa0010910:CDS |
| TACTGCAGCTCTAGCACAAC+TGG | 0.415141 | 1_1:-16479972 | Msa0010910:CDS |
| TATGGCTGCTGCTGATGATT+GGG | 0.419906 | 1_1:-16479627 | Msa0010910:CDS |
| TGTTCAATTTCTAGCTAGAT+TGG | 0.419969 | 1_1:-16484390 | Msa0010910:five_prime_UTR |
| AGGTTGCTTGAGTGGATAGT+AGG | 0.422298 | 1_1:+16480485 | None:intergenic |
| ATGTTAATTAACGCAATAAT+CGG | 0.422821 | 1_1:+16475488 | None:intergenic |
| CCAAGGCCTTTAGGTCCTCT+TGG | 0.424024 | 1_1:-16477168 | Msa0010910:CDS |
| GGAAAACCAAAGGAAATAAA+CGG | 0.424170 | 1_1:-16475645 | Msa0010910:CDS |
| AGTTCAGATCCACGGGTAGA+AGG | 0.425091 | 1_1:+16480133 | None:intergenic |
| AATCTGCTGGGCTTCAGTTT+CGG | 0.426706 | 1_1:+16478812 | None:intergenic |
| TGAAAGCTCACCTTCTAAAT+CGG | 0.432039 | 1_1:+16480519 | None:intergenic |
| GAAAACCAAAGGAAATAAAC+GGG | 0.435327 | 1_1:-16475644 | Msa0010910:CDS |
| GCTTATACAGGACTTCTTTG+AGG | 0.435586 | 1_1:-16478994 | Msa0010910:intron |
| AGCAACCTTGATACATGGTT+TGG | 0.436211 | 1_1:-16480470 | Msa0010910:CDS |
| CATATCCTCCTAATGCTAAT+CGG | 0.438507 | 1_1:-16479598 | Msa0010910:CDS |
| GCCTTTCTGTGGTTCTTCTA+CGG | 0.438652 | 1_1:+16478691 | None:intergenic |
| CATTTGCTCTTCTGGTGAAA+AGG | 0.441118 | 1_1:-16479844 | Msa0010910:CDS |
| CCGGTCTGCCGATTAGCATT+AGG | 0.441791 | 1_1:+16479590 | None:intergenic |
| AAATCGTCATCCTGAACAAC+GGG | 0.443953 | 1_1:-16478667 | Msa0010910:CDS |
| TTACCGTCACCGCTTGGTTA+GGG | 0.446964 | 1_1:-16484526 | None:intergenic |
| TCACGCGCACTGTGTGTGTT+TGG | 0.451429 | 1_1:+16484464 | None:intergenic |
| AAGGAGATATCCGATTTAGA+AGG | 0.455997 | 1_1:-16480529 | Msa0010910:CDS |
| AGGTCCTCTTGGTCTACAAC+AGG | 0.457183 | 1_1:-16477157 | Msa0010910:intron |
| TGAAATATGTCAAGATGCTA+TGG | 0.457337 | 1_1:-16475679 | Msa0010910:CDS |
| GACTCGTGGGTTCAGTTGAC+AGG | 0.457851 | 1_1:-16478632 | Msa0010910:CDS |
| ACAAGCTGCAAGTGACTCAT+TGG | 0.462838 | 1_1:-16479933 | Msa0010910:CDS |
| CACCTCTTCTCTCAATGATA+AGG | 0.466166 | 1_1:-16484160 | Msa0010910:intron |
| CCAAGAGGACCTAAAGGCCT+TGG | 0.469828 | 1_1:+16477168 | None:intergenic |
| ATAGCAGCAGATATGTTTGT+AGG | 0.476239 | 1_1:-16477291 | Msa0010910:CDS |
| CAACAGGGATGGATCCGTAT+AGG | 0.477278 | 1_1:-16475864 | Msa0010910:intron |
| AAATATCAGACCTGGACAAA+TGG | 0.478669 | 1_1:-16480363 | Msa0010910:CDS |
| GATGCTATGGAAAGATTAAG+TGG | 0.486477 | 1_1:-16475666 | Msa0010910:CDS |
| AGCTAGCAGTGCAATCTGCT+GGG | 0.487168 | 1_1:+16478800 | None:intergenic |
| GCTTTGGCCGCTCTTGATGA+AGG | 0.487852 | 1_1:-16480283 | Msa0010910:CDS |
| CAAACGCAAGCCAAATTTGA+CGG | 0.488013 | 1_1:+16475345 | None:intergenic |
| AAAAGCACTACCAGAATCAA+TGG | 0.488194 | 1_1:-16478883 | Msa0010910:CDS |
| CCTCCATATGAGGTGTTTGA+CGG | 0.488508 | 1_1:+16480001 | None:intergenic |
| TTGATACATGGTTTGGCCGA+TGG | 0.489371 | 1_1:-16480463 | Msa0010910:CDS |
| ACCTCTGCTTAGTATGCAGT+TGG | 0.491714 | 1_1:-16478964 | Msa0010910:CDS |
| AGCAGATATGTTTGTAGGGA+GGG | 0.495602 | 1_1:-16477286 | Msa0010910:CDS |
| ACAAGAGAGTACTGCTGCTA+TGG | 0.495618 | 1_1:-16479645 | Msa0010910:CDS |
| TTCTAAATCGGATATCTCCT+TGG | 0.496112 | 1_1:+16480531 | None:intergenic |
| TGCAGAGACAGAAGTAAAGA+TGG | 0.497612 | 1_1:+16480217 | None:intergenic |
| AAGAGAACATCCAAAAGATC+AGG | 0.497714 | 1_1:+16480328 | None:intergenic |
| TTGGCTTCATCAGCAGCTGC+AGG | 0.498943 | 1_1:-16479815 | Msa0010910:CDS |
| GGACGAAGAAGAAAGCTTTG+AGG | 0.502847 | 1_1:-16478862 | Msa0010910:CDS |
| AAGGCGAGTAGAAGAAGCTT+TGG | 0.503692 | 1_1:-16480299 | Msa0010910:CDS |
| AGTATATGCTCCTCCATATG+AGG | 0.506025 | 1_1:+16479991 | None:intergenic |
| TGGATGTTCTCTTGGCTGAA+AGG | 0.507358 | 1_1:-16480318 | Msa0010910:CDS |
| GCAGTTGGGAGGACAAGCTC+TGG | 0.512635 | 1_1:-16478949 | Msa0010910:CDS |
| ATTATTGCGTTAATTAACAT+TGG | 0.513415 | 1_1:-16475485 | Msa0010910:three_prime_UTR |
| TTTCATAAAACTGAACAGAA+TGG | 0.516066 | 1_1:-16477319 | Msa0010910:CDS |
| GACACTTCTGCGCATCTCCT+CGG | 0.517265 | 1_1:+16482678 | None:intergenic |
| GTCATCCTGAACAACGGGAA+TGG | 0.517673 | 1_1:-16478662 | Msa0010910:CDS |
| TTGAAATGCTGTTGTACTAC+CGG | 0.521142 | 1_1:+16479571 | None:intergenic |
| GAAATGCGGATGAAGTTGAA+TGG | 0.522687 | 1_1:-16478512 | Msa0010910:CDS |
| CGATGATGAAGTCATCTTCA+CGG | 0.524587 | 1_1:-16484287 | Msa0010910:CDS |
| TTCATATTACCGTCACCGCT+TGG | 0.526712 | 1_1:-16484532 | None:intergenic |
| GAACCATCAAATTGAAGCGA+TGG | 0.527818 | 1_1:+16479528 | None:intergenic |
| AAACGCAAGCCAAATTTGAC+GGG | 0.528414 | 1_1:+16475346 | None:intergenic |
| GAGTGTGTTCAAATAGCATT+GGG | 0.528713 | 1_1:-16479773 | Msa0010910:CDS |
| TCTGGTGAAAAGGCATGCAT+TGG | 0.529675 | 1_1:-16479834 | Msa0010910:CDS |
| ATGTATCAAGGTTGCTTGAG+TGG | 0.531435 | 1_1:+16480477 | None:intergenic |
| CCTAAACCAAGATTCCTGTA+AGG | 0.532557 | 1_1:-16478721 | Msa0010910:CDS |
| TTCTTCTGAACTTGTGATGT+GGG | 0.533142 | 1_1:-16479885 | Msa0010910:CDS |
| CTAACTATGCAGCCTTCATA+CGG | 0.533378 | 1_1:-16482651 | Msa0010910:intron |
| TGACAAATACCGACCGTTGG+AGG | 0.534564 | 1_1:+16475945 | None:intergenic |
| AACACAAACTAACCGTATGA+AGG | 0.541012 | 1_1:+16482639 | None:intergenic |
| CAGGACTTCTTTGAGGATGT+AGG | 0.541656 | 1_1:-16478987 | Msa0010910:CDS |
| ATTCTTCTGAACTTGTGATG+TGG | 0.543682 | 1_1:-16479886 | Msa0010910:CDS |
| TAGCAGCAGATATGTTTGTA+GGG | 0.544112 | 1_1:-16477290 | Msa0010910:CDS |
| ATCGGCCAAACCATGTATCA+AGG | 0.549441 | 1_1:+16480465 | None:intergenic |
| TCGTGATCTTGTTATGGCGG+CGG | 0.551537 | 1_1:-16484313 | Msa0010910:exon |
| AATGGAGTTAAGCTTGAAGA+AGG | 0.551779 | 1_1:-16484234 | Msa0010910:CDS |
| AGTATAACATGCAAAGTCTC+CGG | 0.553019 | 1_1:-16480024 | Msa0010910:CDS |
| ACTCAAGCAACCTTGATACA+TGG | 0.553619 | 1_1:-16480475 | Msa0010910:CDS |
| TAAATGTCATAGAACTTCCA+AGG | 0.554039 | 1_1:-16480548 | Msa0010910:intron |
| AGTGGATAGTAGGTTTCTGA+TGG | 0.555242 | 1_1:+16480495 | None:intergenic |
| TTGGACTGTACTAATTTACA+GGG | 0.560286 | 1_1:+16475530 | None:intergenic |
| GACATGTATATAAGTATGGA+AGG | 0.560326 | 1_1:-16478534 | Msa0010910:CDS |
| ATCTTCACGGTCAAGAGCTA+CGG | 0.560822 | 1_1:-16484274 | Msa0010910:CDS |
| TGGAAACAAAATTGTACGAA+TGG | 0.565828 | 1_1:-16478835 | Msa0010910:CDS |
| CATATGAGGTGTTTGACGGC+CGG | 0.569334 | 1_1:+16480005 | None:intergenic |
| AACCATCAAATTGAAGCGAT+GGG | 0.570523 | 1_1:+16479529 | None:intergenic |
| GGAGTGTGTTCAAATAGCAT+TGG | 0.572465 | 1_1:-16479774 | Msa0010910:CDS |
| TGCACGAAGTTCAGATCCAC+GGG | 0.573946 | 1_1:+16480126 | None:intergenic |
| ATGATATTGAGGAAGGGCCA+AGG | 0.574464 | 1_1:-16477185 | Msa0010910:CDS |
| CCTAATGCTAATCGGCAGAC+CGG | 0.576241 | 1_1:-16479590 | Msa0010910:CDS |
| CTTATCATTGAGAGAAGAGG+TGG | 0.582451 | 1_1:+16484161 | None:intergenic |
| TTATCGATATCCGATTCTGA+TGG | 0.583099 | 1_1:-16480424 | Msa0010910:CDS |
| TGTAGACCAAGAGGACCTAA+AGG | 0.584749 | 1_1:+16477162 | None:intergenic |
| GAGAGCTTCATGGCTGCGCG+TGG | 0.585405 | 1_1:+16478747 | None:intergenic |
| TCTAATGCTTGTTCAACACT+AGG | 0.587244 | 1_1:+16479686 | None:intergenic |
| TTGGGAGGACAAGCTCTGGA+AGG | 0.588760 | 1_1:-16478945 | Msa0010910:CDS |
| CCTCTGCTTAGTATGCAGTT+GGG | 0.589651 | 1_1:-16478963 | Msa0010910:CDS |
| GTGCAGAGACAGATGCAGTA+GGG | 0.590473 | 1_1:+16475604 | None:intergenic |
| GCTTGTCAGCCTTCTACCCG+TGG | 0.590728 | 1_1:-16480142 | Msa0010910:CDS |
| TGTGAATGAAATTATCAGGA+AGG | 0.593693 | 1_1:-16475905 | Msa0010910:CDS |
| ACAGGAATCTTGGTTTAGGG+AGG | 0.595294 | 1_1:+16478725 | None:intergenic |
| TCAAATCTATCAGACTTGAA+AGG | 0.596208 | 1_1:+16484204 | None:intergenic |
| AAGATTAAGTGGAAAACCAA+AGG | 0.598349 | 1_1:-16475655 | Msa0010910:CDS |
| TTTGGGATGATATTGAGGAA+GGG | 0.600436 | 1_1:-16477191 | Msa0010910:CDS |
| TGGGAGGACAAGCTCTGGAA+GGG | 0.602271 | 1_1:-16478944 | Msa0010910:CDS |
| CCTTGACAAATACCGACCGT+TGG | 0.602728 | 1_1:+16475942 | None:intergenic |
| ACCGTAGAAGAACCACAGAA+AGG | 0.603747 | 1_1:-16478692 | Msa0010910:CDS |
| TGTGCAGAGACAGATGCAGT+AGG | 0.604544 | 1_1:+16475603 | None:intergenic |
| ATCCTGAACAACGGGAATGG+AGG | 0.608982 | 1_1:-16478659 | Msa0010910:CDS |
| TATAAGTATGGAAGGAAATG+CGG | 0.609812 | 1_1:-16478526 | Msa0010910:CDS |
| ATGCACGAAGTTCAGATCCA+CGG | 0.609989 | 1_1:+16480125 | None:intergenic |
| GTCTGCCGATTAGCATTAGG+AGG | 0.611723 | 1_1:+16479593 | None:intergenic |
| GTGATCTGCCTGAAGATGAA+TGG | 0.612166 | 1_1:-16475707 | Msa0010910:CDS |
| AAATCAGGCTCAAAGCATGT+TGG | 0.615504 | 1_1:+16478589 | None:intergenic |
| AACCTTATCATTGAGAGAAG+AGG | 0.615582 | 1_1:+16484158 | None:intergenic |
| GGAATGGAGGAGACGACTCG+TGG | 0.616377 | 1_1:-16478646 | Msa0010910:CDS |
| TAGTTCATCAGCCAGTAATG+AGG | 0.617154 | 1_1:+16478773 | None:intergenic |
| GCTTCATCAGCAGCTGCAGG+AGG | 0.617864 | 1_1:-16479812 | Msa0010910:CDS |
| GCAGAGACAGAAGTAAAGAT+GGG | 0.618767 | 1_1:+16480218 | None:intergenic |
| CAGCAGATATGTTTGTAGGG+AGG | 0.620591 | 1_1:-16477287 | Msa0010910:CDS |
| CTCTATGATCCCTAACCAAG+CGG | 0.621663 | 1_1:+16484517 | None:intergenic |
| ACTCAACTAACCATTTGTCC+AGG | 0.622338 | 1_1:+16480353 | None:intergenic |
| TGCTCATTATTAGAAGCTCG+TGG | 0.624438 | 1_1:-16479746 | Msa0010910:CDS |
| TGAATCGATGTGAACTCCAT+CGG | 0.624805 | 1_1:+16480447 | None:intergenic |
| CTTGAAAAGAGCTTCTGCCG+AGG | 0.627062 | 1_1:-16482695 | Msa0010910:CDS |
| CCAACGGTCGGTATTTGTCA+AGG | 0.628869 | 1_1:-16475942 | Msa0010910:CDS |
| TAGATTGGCGCGTGTGTGCG+TGG | 0.630527 | 1_1:-16484375 | Msa0010910:five_prime_UTR |
| CCTTCGTGATCTTGTTATGG+CGG | 0.635548 | 1_1:-16484316 | Msa0010910:exon |
| ACATAAAGAAATATCAGACC+TGG | 0.635904 | 1_1:-16480371 | Msa0010910:CDS |
| AGTAGCAAGCTGTGAGCATG+CGG | 0.636005 | 1_1:+16480070 | None:intergenic |
| CCGTCAAACACCTCATATGG+AGG | 0.647577 | 1_1:-16480001 | Msa0010910:CDS |
| CCCAACTGCATACTAAGCAG+AGG | 0.650328 | 1_1:+16478963 | None:intergenic |
| AAAATCGTCATCCTGAACAA+CGG | 0.651815 | 1_1:-16478668 | Msa0010910:CDS |
| AGGAGGTTTAAGAGCTGCTG+CGG | 0.658917 | 1_1:-16479795 | Msa0010910:CDS |
| CATACCTGTTGTAGACCAAG+AGG | 0.660216 | 1_1:+16477153 | None:intergenic |
| GAATGGAGGAGACGACTCGT+GGG | 0.664709 | 1_1:-16478645 | Msa0010910:CDS |
| ACGTTCTCCTTCATCAAGAG+CGG | 0.665530 | 1_1:+16480276 | None:intergenic |
| TTCACGGTCAAGAGCTACGG+CGG | 0.666183 | 1_1:-16484271 | Msa0010910:CDS |
| ACAAGTTCAGAAGAATACGC+TGG | 0.693012 | 1_1:+16479893 | None:intergenic |
| CTGCTTAGTATGCAGTTGGG+AGG | 0.693555 | 1_1:-16478960 | Msa0010910:CDS |
| GAATTGAATTGAAGAAGACA+CGG | 0.698389 | 1_1:+16484436 | None:intergenic |
| AAAATGAAAGGGGTGCCAAG+GGG | 0.724461 | 1_1:+16475430 | None:intergenic |
| CCGCCATAACAAGATCACGA+AGG | 0.740134 | 1_1:+16484316 | None:intergenic |
| AAAACCAAAGGAAATAAACG+GGG | 0.769107 | 1_1:-16475643 | Msa0010910:CDS |
| AGAATTCTATTACCGAACGT+AGG | 0.770772 | 1_1:-16480195 | Msa0010910:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATATATATATT+AGG | + | chr1_1:16481856-16481875 | None:intergenic | 0.0% |
| !!! | TTAATATAAATAATTTTAAA+TGG | + | chr1_1:16483331-16483350 | None:intergenic | 0.0% |
| !! | AAGCTTAATTATATATATTT+AGG | - | chr1_1:16475772-16475791 | Msa0010910:intron | 10.0% |
| !!! | TATTTTTCTCAAATTATTAT+CGG | - | chr1_1:16476297-16476316 | Msa0010910:intron | 10.0% |
| !!! | TCTTATTTATATATTATCAT+CGG | + | chr1_1:16477409-16477428 | None:intergenic | 10.0% |
| !!! | AATTCATTTTATTAAATTAG+GGG | + | chr1_1:16477512-16477531 | None:intergenic | 10.0% |
| !!! | CAATTCATTTTATTAAATTA+GGG | + | chr1_1:16477513-16477532 | None:intergenic | 10.0% |
| !!! | TCAATTCATTTTATTAAATT+AGG | + | chr1_1:16477514-16477533 | None:intergenic | 10.0% |
| !!! | AAAAAAAATCATTTTTGAAA+TGG | + | chr1_1:16477880-16477899 | None:intergenic | 10.0% |
| !! | TTAAGCTAAATAAATTAAAA+TGG | + | chr1_1:16479189-16479208 | None:intergenic | 10.0% |
| !! | TAAATATTATAACAAATACA+AGG | + | chr1_1:16483628-16483647 | None:intergenic | 10.0% |
| !! | AACGTTAAAAAAAAATTATA+TGG | + | chr1_1:16483793-16483812 | None:intergenic | 10.0% |
| !! | AATATATATAATTAAGCTTC+TGG | + | chr1_1:16475771-16475790 | None:intergenic | 15.0% |
| !! | TGTATGCTATATTATTTATA+GGG | + | chr1_1:16477448-16477467 | None:intergenic | 15.0% |
| !! | ATGTATGCTATATTATTTAT+AGG | + | chr1_1:16477449-16477468 | None:intergenic | 15.0% |
| !!! | TTTTGTTAATATATCTATCT+AGG | + | chr1_1:16477707-16477726 | None:intergenic | 15.0% |
| !! | TTAAATTGTAAGCAATTTAA+TGG | + | chr1_1:16477991-16478010 | None:intergenic | 15.0% |
| !!! | AAATTTTCAAAAGGAAATAT+TGG | + | chr1_1:16478329-16478348 | None:intergenic | 15.0% |
| !!! | TTTTGAAAATTTTCAGAATT+CGG | - | chr1_1:16478337-16478356 | Msa0010910:intron | 15.0% |
| !!! | TGTTGATTTTTAAAAATTAC+AGG | - | chr1_1:16481596-16481615 | Msa0010910:intron | 15.0% |
| !!! | TTTTTAAAAATTACAGGATT+AGG | - | chr1_1:16481602-16481621 | Msa0010910:intron | 15.0% |
| !! | TCTACAATTAGAAATATATA+TGG | + | chr1_1:16481649-16481668 | None:intergenic | 15.0% |
| !! | ATATAATAAACCACAAAAAT+TGG | + | chr1_1:16481761-16481780 | None:intergenic | 15.0% |
| !! | TAAGTTATTAAGATATTCAA+AGG | + | chr1_1:16482310-16482329 | None:intergenic | 15.0% |
| !! | TTGAATATCTTAATAACTTA+TGG | - | chr1_1:16482310-16482329 | Msa0010910:intron | 15.0% |
| !!! | CAAATTGGATAATTTTATTT+GGG | - | chr1_1:16482766-16482785 | Msa0010910:intron | 15.0% |
| !! | TTATTAACATTAGCTATAAT+GGG | - | chr1_1:16483218-16483237 | Msa0010910:intron | 15.0% |
| !!! | TTTGTCTTTATTCATTTTAA+TGG | - | chr1_1:16484389-16484408 | Msa0010910:five_prime_UTR | 15.0% |
| !!! | TTGTCTTTATTCATTTTAAT+GGG | - | chr1_1:16484390-16484409 | Msa0010910:five_prime_UTR | 15.0% |
| !! | TATATATATTTAGGTCTGTT+TGG | - | chr1_1:16475781-16475800 | Msa0010910:intron | 20.0% |
| !!! | ATTATCAGCTTATTTTGATA+AGG | + | chr1_1:16475948-16475967 | None:intergenic | 20.0% |
| !! | TATCAAAATAAGCTGATAAT+AGG | - | chr1_1:16475948-16475967 | Msa0010910:CDS | 20.0% |
| !! | GAGAAAAATAACATAATTGA+AGG | + | chr1_1:16476287-16476306 | None:intergenic | 20.0% |
| !!! | CTTTACTAGTTTATAGTTTA+AGG | + | chr1_1:16477208-16477227 | None:intergenic | 20.0% |
| !! | ATACAATAATTTAACACAGA+TGG | - | chr1_1:16477539-16477558 | Msa0010910:intron | 20.0% |
| !! | TACAATAATTTAACACAGAT+GGG | - | chr1_1:16477540-16477559 | Msa0010910:intron | 20.0% |
| !!! | GATATTTTAGAACATATACT+AGG | - | chr1_1:16477644-16477663 | Msa0010910:intron | 20.0% |
| !! | CAAAAAATACTTGTATCATA+AGG | - | chr1_1:16477826-16477845 | Msa0010910:intron | 20.0% |
| !!! | GAATTCTGAAAATTTTCAAA+AGG | + | chr1_1:16478338-16478357 | None:intergenic | 20.0% |
| !! | TATTTATTTGATGAAACATG+AGG | + | chr1_1:16478944-16478963 | None:intergenic | 20.0% |
| !! | AAGGATAAATAAAAAGAACA+AGG | + | chr1_1:16479100-16479119 | None:intergenic | 20.0% |
| !!! | GGTAACTGTTTTTTTTTTAA+TGG | + | chr1_1:16480426-16480445 | None:intergenic | 20.0% |
| !! | GACAAAATAAAAAGATGAAA+AGG | + | chr1_1:16480595-16480614 | None:intergenic | 20.0% |
| !!! | ATTTTCAATTTACTTTAAGC+TGG | - | chr1_1:16480770-16480789 | Msa0010910:intron | 20.0% |
| !!! | TTTTCAATTTACTTTAAGCT+GGG | - | chr1_1:16480771-16480790 | Msa0010910:intron | 20.0% |
| !!! | TTTTTGGAAATTTGTGAAAT+TGG | - | chr1_1:16481702-16481721 | Msa0010910:intron | 20.0% |
| !!! | ATTTGTGAAATTGGTAATTA+AGG | - | chr1_1:16481711-16481730 | Msa0010910:intron | 20.0% |
| !! | CAAAAGAAATATTACTCATT+GGG | - | chr1_1:16481926-16481945 | Msa0010910:intron | 20.0% |
| !! | TAAAACATAGTTAGCATTTA+TGG | + | chr1_1:16482253-16482272 | None:intergenic | 20.0% |
| !!! | AAACAATTTTCAGTTAGTTT+TGG | - | chr1_1:16482694-16482713 | Msa0010910:CDS | 20.0% |
| !!! | ATTATCCAATTTGCTTATAA+AGG | + | chr1_1:16482759-16482778 | None:intergenic | 20.0% |
| !!! | GCAAATTGGATAATTTTATT+TGG | - | chr1_1:16482765-16482784 | Msa0010910:intron | 20.0% |
| !! | AAGAACTCAAGTTTATTATT+GGG | + | chr1_1:16483020-16483039 | None:intergenic | 20.0% |
| !!! | CAATTACATGTTTTAATCAA+AGG | - | chr1_1:16483150-16483169 | Msa0010910:intron | 20.0% |
| !! | AGTATCAATTTAAGAAATCA+AGG | + | chr1_1:16483188-16483207 | None:intergenic | 20.0% |
| !! | CTTATTAACATTAGCTATAA+TGG | - | chr1_1:16483217-16483236 | Msa0010910:intron | 20.0% |
| !!! | ACAAATTTTCTTATAAGTTG+TGG | + | chr1_1:16483605-16483624 | None:intergenic | 20.0% |
| !! | ATGTTAATTAACGCAATAAT+CGG | + | chr1_1:16484313-16484332 | None:intergenic | 20.0% |
| !! | ATTATTGCGTTAATTAACAT+TGG | - | chr1_1:16484313-16484332 | Msa0010910:exon | 20.0% |
| !! | AATAAAGACAAAAATGAAAG+GGG | + | chr1_1:16484381-16484400 | None:intergenic | 20.0% |
| !! | GAATAAAGACAAAAATGAAA+GGG | + | chr1_1:16484382-16484401 | None:intergenic | 20.0% |
| !! | TGAATAAAGACAAAAATGAA+AGG | + | chr1_1:16484383-16484402 | None:intergenic | 20.0% |
| !!! | TGTCTTTATTCATTTTAATG+GGG | - | chr1_1:16484391-16484410 | Msa0010910:five_prime_UTR | 20.0% |
| ! | CAACATTGAATGAATTGAAT+TGG | + | chr1_1:16475387-16475406 | None:intergenic | 25.0% |
| ! | AAAATTGAAAAGCTGATGAA+TGG | + | chr1_1:16475711-16475730 | None:intergenic | 25.0% |
| ! | CGTTTAATATGCTTATGTAT+AGG | - | chr1_1:16475839-16475858 | Msa0010910:intron | 25.0% |
| ! | TGATAATAGGTTAGAAACAA+CGG | - | chr1_1:16475961-16475980 | Msa0010910:CDS | 25.0% |
| !! | TAACTTTTGTGAGACTATTT+GGG | + | chr1_1:16476128-16476147 | None:intergenic | 25.0% |
| !! | ATAACTTTTGTGAGACTATT+TGG | + | chr1_1:16476129-16476148 | None:intergenic | 25.0% |
| ! | CTCTTAAATTCTTCACTTAT+TGG | + | chr1_1:16476419-16476438 | None:intergenic | 25.0% |
| ! | GCATCACAATTGATATATAA+AGG | + | chr1_1:16476502-16476521 | None:intergenic | 25.0% |
| !!! | TCATGCATAGTTTTAAATTC+CGG | + | chr1_1:16476579-16476598 | None:intergenic | 25.0% |
| ! | AAAATTGTGACTAAAAGGAA+TGG | + | chr1_1:16476888-16476907 | None:intergenic | 25.0% |
| ! | GAAACAAAATTGTGACTAAA+AGG | + | chr1_1:16476893-16476912 | None:intergenic | 25.0% |
| ! | TAATGGTAAAACCTATTTGT+TGG | - | chr1_1:16476933-16476952 | Msa0010910:intron | 25.0% |
| ! | AATGGTAAAACCTATTTGTT+GGG | - | chr1_1:16476934-16476953 | Msa0010910:intron | 25.0% |
| ! | CTATAAACTAGTAAAGAAAG+TGG | - | chr1_1:16477212-16477231 | Msa0010910:CDS | 25.0% |
| ! | ATACTTGTATCATAAGGAAA+AGG | - | chr1_1:16477832-16477851 | Msa0010910:intron | 25.0% |
| ! | ACATTTGTAAAAAGTTCACA+AGG | + | chr1_1:16477905-16477924 | None:intergenic | 25.0% |
| !! | TGACATATTGTCGTTTATTA+GGG | + | chr1_1:16477935-16477954 | None:intergenic | 25.0% |
| ! | AATTGTAAGCAATTTAATGG+AGG | + | chr1_1:16477988-16478007 | None:intergenic | 25.0% |
| ! | TCCATCTATAAATCATCAAT+AGG | - | chr1_1:16478072-16478091 | Msa0010910:intron | 25.0% |
| !! | CAAAAATCAAAGCAAGTTTT+TGG | - | chr1_1:16478260-16478279 | Msa0010910:intron | 25.0% |
| ! | TCTGCATTTAAATTTCTGTA+TGG | - | chr1_1:16478658-16478677 | Msa0010910:CDS | 25.0% |
| ! | AAATTTCTGTATGGTAGATT+TGG | - | chr1_1:16478667-16478686 | Msa0010910:CDS | 25.0% |
| !!! | TCTTTGCTTAAGTATTTTGA+GGG | - | chr1_1:16478811-16478830 | Msa0010910:CDS | 25.0% |
| ! | GATGCTTCATAAATTCTAAA+AGG | - | chr1_1:16478898-16478917 | Msa0010910:CDS | 25.0% |
| ! | ATCAGTATATGATTTGACAA+AGG | - | chr1_1:16478968-16478987 | Msa0010910:CDS | 25.0% |
| ! | TCAGTATATGATTTGACAAA+GGG | - | chr1_1:16478969-16478988 | Msa0010910:CDS | 25.0% |
| !! | CTAAAAAGTTTCAAAAGTAC+AGG | + | chr1_1:16480091-16480110 | None:intergenic | 25.0% |
| ! | TTATGACATAGAATGATGTT+TGG | - | chr1_1:16480326-16480345 | Msa0010910:CDS | 25.0% |
| ! | TATGACATAGAATGATGTTT+GGG | - | chr1_1:16480327-16480346 | Msa0010910:CDS | 25.0% |
| ! | AAAATTCACATTGCAAATCA+AGG | + | chr1_1:16480447-16480466 | None:intergenic | 25.0% |
| ! | TAATTGTGTGAAAAAACAGA+TGG | - | chr1_1:16480491-16480510 | Msa0010910:CDS | 25.0% |
| ! | ATCATAGACTAATAGACTAA+AGG | + | chr1_1:16480548-16480567 | None:intergenic | 25.0% |
| !!! | CAGCTGCATTATTTTAATAT+TGG | - | chr1_1:16480692-16480711 | Msa0010910:intron | 25.0% |
| ! | AAAAACCACAAACTACATAA+GGG | + | chr1_1:16480749-16480768 | None:intergenic | 25.0% |
| ! | AAAAAACCACAAACTACATA+AGG | + | chr1_1:16480750-16480769 | None:intergenic | 25.0% |
| !!! | GGTATTTTTTATGCTTATAC+AGG | - | chr1_1:16480792-16480811 | Msa0010910:intron | 25.0% |
| ! | TATACCTGAAAAATCAAAGA+CGG | + | chr1_1:16481315-16481334 | None:intergenic | 25.0% |
| !!! | CTTTGATTTTTCAGGTATAA+TGG | - | chr1_1:16481316-16481335 | Msa0010910:intron | 25.0% |
| !! | AAGTGTTAAATTTAAAACCC+AGG | + | chr1_1:16481344-16481363 | None:intergenic | 25.0% |
| !! | AAATCTTCAAAACTGATTCA+TGG | + | chr1_1:16481367-16481386 | None:intergenic | 25.0% |
| !! | TATTTCTTTTGGTAGATGAA+TGG | + | chr1_1:16481917-16481936 | None:intergenic | 25.0% |
| !! | CCAATGAGTAATATTTCTTT+TGG | + | chr1_1:16481928-16481947 | None:intergenic | 25.0% |
| ! | CCAAAAGAAATATTACTCAT+TGG | - | chr1_1:16481925-16481944 | Msa0010910:intron | 25.0% |
| ! | CAATTTATTATTTCCTTCTG+TGG | + | chr1_1:16481971-16481990 | None:intergenic | 25.0% |
| !! | TTTTTGTTGAGTTTTACATG+CGG | - | chr1_1:16482054-16482073 | Msa0010910:intron | 25.0% |
| !! | TTAAACTCTGCATTTTATCA+AGG | + | chr1_1:16482121-16482140 | None:intergenic | 25.0% |
| !!! | ACAACTTTTTTACATCTTAG+TGG | - | chr1_1:16482172-16482191 | Msa0010910:intron | 25.0% |
| !!! | CAACTTTTTTACATCTTAGT+GGG | - | chr1_1:16482173-16482192 | Msa0010910:intron | 25.0% |
| ! | TAATAACTTATGGAACATGT+TGG | - | chr1_1:16482320-16482339 | Msa0010910:intron | 25.0% |
| ! | TTTCATAAAACTGAACAGAA+TGG | - | chr1_1:16482479-16482498 | Msa0010910:intron | 25.0% |
| !!! | TTACAGAAACTGTTATTTTG+TGG | - | chr1_1:16482565-16482584 | Msa0010910:intron | 25.0% |
| ! | ATGCAATTGAAATTTGATCA+TGG | - | chr1_1:16482665-16482684 | Msa0010910:CDS | 25.0% |
| ! | TGATTCCTTTATAAGCAAAT+TGG | - | chr1_1:16482751-16482770 | Msa0010910:intron | 25.0% |
| ! | TATTATTCTGTTTAAACCAC+TGG | + | chr1_1:16482862-16482881 | None:intergenic | 25.0% |
| ! | TATTTACATGCCTTAAACTT+TGG | + | chr1_1:16482964-16482983 | None:intergenic | 25.0% |
| ! | CAAGAACTCAAGTTTATTAT+TGG | + | chr1_1:16483021-16483040 | None:intergenic | 25.0% |
| ! | ATTAAAACATGTAATTGACG+AGG | + | chr1_1:16483147-16483166 | None:intergenic | 25.0% |
| ! | TCAATTTAAGAAATCAAGGA+TGG | + | chr1_1:16483184-16483203 | None:intergenic | 25.0% |
| ! | GAATTGTGAATGAAATTATC+AGG | - | chr1_1:16483889-16483908 | Msa0010910:intron | 25.0% |
| ! | AATTGCAAAACATACCTATA+CGG | + | chr1_1:16483951-16483970 | None:intergenic | 25.0% |
| !!! | GTCTTTATTCATTTTAATGG+GGG | - | chr1_1:16484392-16484411 | Msa0010910:five_prime_UTR | 25.0% |
| GAATTGAATTGAAGAAGACA+CGG | + | chr1_1:16475365-16475384 | None:intergenic | 30.0% | |
| !! | TGTTCAATTTCTAGCTAGAT+TGG | - | chr1_1:16475408-16475427 | Msa0010910:three_prime_UTR | 30.0% |
| TCAAATCTATCAGACTTGAA+AGG | + | chr1_1:16475597-16475616 | None:intergenic | 30.0% | |
| ACAAGAAACAATGGATCAAA+GGG | + | chr1_1:16475666-16475685 | None:intergenic | 30.0% | |
| AACAAGAAACAATGGATCAA+AGG | + | chr1_1:16475667-16475686 | None:intergenic | 30.0% | |
| GTAATCGAAACAAGAAACAA+TGG | + | chr1_1:16475675-16475694 | None:intergenic | 30.0% | |
| GATAATAGGTTAGAAACAAC+GGG | - | chr1_1:16475962-16475981 | Msa0010910:CDS | 30.0% | |
| ATAATAGGTTAGAAACAACG+GGG | - | chr1_1:16475963-16475982 | Msa0010910:CDS | 30.0% | |
| TTATACATGTGACACATGTT+TGG | + | chr1_1:16476180-16476199 | None:intergenic | 30.0% | |
| ! | ATACCAACATTTTCTATCGA+AGG | - | chr1_1:16476199-16476218 | Msa0010910:intron | 30.0% |
| AAATTCTTCACTTATTGGAG+TGG | + | chr1_1:16476414-16476433 | None:intergenic | 30.0% | |
| ATAGTTTCTTGTTGCTAACA+AGG | - | chr1_1:16476453-16476472 | Msa0010910:intron | 30.0% | |
| ATGAATAACATGATTGACAG+AGG | + | chr1_1:16476625-16476644 | None:intergenic | 30.0% | |
| !! | TTGTTTCTAGTTCGTATACT+TGG | - | chr1_1:16476663-16476682 | Msa0010910:intron | 30.0% |
| AACCATGTAGATCATAATAG+AGG | + | chr1_1:16476725-16476744 | None:intergenic | 30.0% | |
| TTATCTGCTATCTAGCATAA+AGG | + | chr1_1:16476757-16476776 | None:intergenic | 30.0% | |
| ! | ATAATCTAAGACTTGTGTTG+AGG | - | chr1_1:16476773-16476792 | Msa0010910:intron | 30.0% |
| TAGATACTTAGACGACTAAA+TGG | + | chr1_1:16476915-16476934 | None:intergenic | 30.0% | |
| TTAGTCGTCTAAGTATCTAA+TGG | - | chr1_1:16476916-16476935 | Msa0010910:intron | 30.0% | |
| ATAAGACATACCCAACAAAT+AGG | + | chr1_1:16476947-16476966 | None:intergenic | 30.0% | |
| CATAATTGCTTAATTTCCTG+GGG | + | chr1_1:16477068-16477087 | None:intergenic | 30.0% | |
| GCATAATTGCTTAATTTCCT+GGG | + | chr1_1:16477069-16477088 | None:intergenic | 30.0% | |
| TGCATAATTGCTTAATTTCC+TGG | + | chr1_1:16477070-16477089 | None:intergenic | 30.0% | |
| TGTTGTTGTATCAACTATCT+AGG | + | chr1_1:16477622-16477641 | None:intergenic | 30.0% | |
| ! | AGATAGTTGATACAACAACA+CGG | - | chr1_1:16477622-16477641 | Msa0010910:intron | 30.0% |
| ! | GACATATTGTCGTTTATTAG+GGG | + | chr1_1:16477934-16477953 | None:intergenic | 30.0% |
| ! | GTGACATATTGTCGTTTATT+AGG | + | chr1_1:16477936-16477955 | None:intergenic | 30.0% |
| ATTTAACGTCTAACACTAAC+TGG | - | chr1_1:16478005-16478024 | Msa0010910:intron | 30.0% | |
| ! | GCCTATTGATGATTTATAGA+TGG | + | chr1_1:16478076-16478095 | None:intergenic | 30.0% |
| ACTCTACCAATTCAAAAAGT+TGG | - | chr1_1:16478097-16478116 | Msa0010910:intron | 30.0% | |
| ! | TAGTGACCAACTTTTTGAAT+TGG | + | chr1_1:16478106-16478125 | None:intergenic | 30.0% |
| GTGCATGAAAAATTTGATGA+TGG | + | chr1_1:16478129-16478148 | None:intergenic | 30.0% | |
| ! | TGAAAATTTTCAGAATTCGG+TGG | - | chr1_1:16478340-16478359 | Msa0010910:intron | 30.0% |
| ! | TATCGATTGGTATTGTATAC+AGG | + | chr1_1:16478399-16478418 | None:intergenic | 30.0% |
| TAAATGCAGAAAAGCTTGAA+GGG | + | chr1_1:16478648-16478667 | None:intergenic | 30.0% | |
| TTAAATGCAGAAAAGCTTGA+AGG | + | chr1_1:16478649-16478668 | None:intergenic | 30.0% | |
| ACAAAACACCAATTGTCTAA+TGG | - | chr1_1:16478745-16478764 | Msa0010910:CDS | 30.0% | |
| CTCAAAATACTTAAGCAAAG+AGG | + | chr1_1:16478812-16478831 | None:intergenic | 30.0% | |
| ! | CTCTTTGCTTAAGTATTTTG+AGG | - | chr1_1:16478810-16478829 | Msa0010910:CDS | 30.0% |
| !! | AAATGTATGCGAAGAGTATT+TGG | + | chr1_1:16478868-16478887 | None:intergenic | 30.0% |
| GAGGATGAAGCTAAAATATT+AGG | + | chr1_1:16478925-16478944 | None:intergenic | 30.0% | |
| !! | ATCAGCTTTTTCTGTATAGA+AGG | + | chr1_1:16479119-16479138 | None:intergenic | 30.0% |
| TAAATGTCATAGAACTTCCA+AGG | - | chr1_1:16479250-16479269 | Msa0010910:intron | 30.0% | |
| TACAGAAAAACCATCAGAAT+CGG | + | chr1_1:16479387-16479406 | None:intergenic | 30.0% | |
| ! | TCTGATGGTTTTTCTGTAAA+TGG | - | chr1_1:16479389-16479408 | Msa0010910:intron | 30.0% |
| ! | TTTTTCTGTAAATGGTACAC+TGG | - | chr1_1:16479397-16479416 | Msa0010910:intron | 30.0% |
| ACATAAAGAAATATCAGACC+TGG | - | chr1_1:16479427-16479446 | Msa0010910:intron | 30.0% | |
| TTTCAGCCCTTAAAAAACTT+GGG | - | chr1_1:16479699-16479718 | Msa0010910:CDS | 30.0% | |
| !! | TGAGTAGTTGTTCTAAAACT+AGG | - | chr1_1:16480386-16480405 | Msa0010910:CDS | 30.0% |
| ATAGACTAATAGACTAAAGG+TGG | + | chr1_1:16480545-16480564 | None:intergenic | 30.0% | |
| TGGAAACAAAATTGTACGAA+TGG | - | chr1_1:16480963-16480982 | Msa0010910:intron | 30.0% | |
| AGCTGACATGTATATAAGTA+TGG | - | chr1_1:16481260-16481279 | Msa0010910:intron | 30.0% | |
| GACATGTATATAAGTATGGA+AGG | - | chr1_1:16481264-16481283 | Msa0010910:intron | 30.0% | |
| TATAAGTATGGAAGGAAATG+CGG | - | chr1_1:16481272-16481291 | Msa0010910:intron | 30.0% | |
| ! | AATCTGATTCTGTAGTCTTA+TGG | - | chr1_1:16481572-16481591 | Msa0010910:intron | 30.0% |
| !!! | TCGAATGTTGGCTAATTTTT+TGG | - | chr1_1:16481686-16481705 | Msa0010910:intron | 30.0% |
| !! | GGATTCTGAGAATATTTTCT+TGG | - | chr1_1:16481732-16481751 | Msa0010910:intron | 30.0% |
| !! | TTCTTGGTAACCAATTTTTG+TGG | - | chr1_1:16481748-16481767 | Msa0010910:intron | 30.0% |
| GCAGAAAATTGAAACTCTTA+CGG | - | chr1_1:16481787-16481806 | Msa0010910:intron | 30.0% | |
| AAAAAAGTTGACGTGTAACT+AGG | + | chr1_1:16482004-16482023 | None:intergenic | 30.0% | |
| ! | TTTTGTTGAGTTTTACATGC+GGG | - | chr1_1:16482055-16482074 | Msa0010910:intron | 30.0% |
| !! | TATCTATCTCCTGGTTTTTA+TGG | - | chr1_1:16482083-16482102 | Msa0010910:intron | 30.0% |
| GTAAAAAAGTTGTCTACCTA+GGG | + | chr1_1:16482165-16482184 | None:intergenic | 30.0% | |
| TGTAAAAAAGTTGTCTACCT+AGG | + | chr1_1:16482166-16482185 | None:intergenic | 30.0% | |
| AGTTGAAGCATAAACAGAAA+CGG | + | chr1_1:16482414-16482433 | None:intergenic | 30.0% | |
| AGACTGTTATGTTATTATCC+AGG | - | chr1_1:16482452-16482471 | Msa0010910:intron | 30.0% | |
| AAACATATCTGCTGCTATAT+TGG | + | chr1_1:16482505-16482524 | None:intergenic | 30.0% | |
| ! | CCTTAAACTTTGGTTTAGTT+TGG | + | chr1_1:16482954-16482973 | None:intergenic | 30.0% |
| CCAAACTAAACCAAAGTTTA+AGG | - | chr1_1:16482951-16482970 | Msa0010910:intron | 30.0% | |
| TAAACAAGATGTTTCGAAGT+TGG | + | chr1_1:16483289-16483308 | None:intergenic | 30.0% | |
| GCATTTCACATGTATTTATC+TGG | + | chr1_1:16483377-16483396 | None:intergenic | 30.0% | |
| TAAATACATGTGAAATGCAC+AGG | - | chr1_1:16483379-16483398 | Msa0010910:intron | 30.0% | |
| ! | GTCAATCAATACTAACCTTT+TGG | - | chr1_1:16483490-16483509 | Msa0010910:intron | 30.0% |
| ! | AATACTAACCTTTTGGATTC+TGG | - | chr1_1:16483497-16483516 | Msa0010910:intron | 30.0% |
| !! | CTAAAGTGTTTTTGAAAGGA+CGG | + | chr1_1:16483523-16483542 | None:intergenic | 30.0% |
| GTCCTTTCAAAAACACTTTA+GGG | - | chr1_1:16483522-16483541 | Msa0010910:intron | 30.0% | |
| GGGCACATTTATTTACTTAT+TGG | - | chr1_1:16483542-16483561 | Msa0010910:intron | 30.0% | |
| !!! | TGTGGAGAATTTTCTGAAAT+GGG | + | chr1_1:16483587-16483606 | None:intergenic | 30.0% |
| !! | TTGTGGAGAATTTTCTGAAA+TGG | + | chr1_1:16483588-16483607 | None:intergenic | 30.0% |
| ! | ATTCTAAAGAGCAATACATG+CGG | + | chr1_1:16483675-16483694 | None:intergenic | 30.0% |
| !!! | TAACGTTGTGCAGTTTTATT+TGG | - | chr1_1:16483806-16483825 | Msa0010910:intron | 30.0% |
| TGTGAATGAAATTATCAGGA+AGG | - | chr1_1:16483893-16483912 | Msa0010910:intron | 30.0% | |
| AAATGCAGATAGAATGTTGA+TGG | + | chr1_1:16483993-16484012 | None:intergenic | 30.0% | |
| TCATTAAACCATTCATCTTC+AGG | + | chr1_1:16484102-16484121 | None:intergenic | 30.0% | |
| TGAAATATGTCAAGATGCTA+TGG | - | chr1_1:16484119-16484138 | Msa0010910:intron | 30.0% | |
| AAGATTAAGTGGAAAACCAA+AGG | - | chr1_1:16484143-16484162 | Msa0010910:intron | 30.0% | |
| GGAAAACCAAAGGAAATAAA+CGG | - | chr1_1:16484153-16484172 | Msa0010910:intron | 30.0% | |
| GAAAACCAAAGGAAATAAAC+GGG | - | chr1_1:16484154-16484173 | Msa0010910:intron | 30.0% | |
| AAAACCAAAGGAAATAAACG+GGG | - | chr1_1:16484155-16484174 | Msa0010910:intron | 30.0% | |
| TTGGACTGTACTAATTTACA+GGG | + | chr1_1:16484271-16484290 | None:intergenic | 30.0% | |
| ATTGGACTGTACTAATTTAC+AGG | + | chr1_1:16484272-16484291 | None:intergenic | 30.0% | |
| CCAGTAATTTCATGATAGAT+TGG | + | chr1_1:16484290-16484309 | None:intergenic | 30.0% | |
| CCAATCTATCATGAAATTAC+TGG | - | chr1_1:16484287-16484306 | Msa0010910:CDS | 30.0% | |
| !!! | ATTTTTTGTCCCGTCAAATT+TGG | - | chr1_1:16484443-16484462 | Msa0010910:five_prime_UTR | 30.0% |
| AATGGAGTTAAGCTTGAAGA+AGG | - | chr1_1:16475564-16475583 | Msa0010910:exon | 35.0% | |
| AACCTTATCATTGAGAGAAG+AGG | + | chr1_1:16475643-16475662 | None:intergenic | 35.0% | |
| ! | ATATGAAGCACCTAACATGT+TGG | + | chr1_1:16476325-16476344 | None:intergenic | 35.0% |
| !! | GCTAACAAGGTTCTAAATTG+TGG | - | chr1_1:16476466-16476485 | Msa0010910:intron | 35.0% |
| ! | GTTCTAAATTGTGGTTGCTA+TGG | - | chr1_1:16476475-16476494 | Msa0010910:intron | 35.0% |
| TTCGTATACTTGGTTGAACA+GGG | - | chr1_1:16476673-16476692 | Msa0010910:intron | 35.0% | |
| TGCCTCTATTATGATCTACA+TGG | - | chr1_1:16476720-16476739 | Msa0010910:intron | 35.0% | |
| ! | GAACATAGTGAAAGAGTACA+AGG | - | chr1_1:16476826-16476845 | Msa0010910:intron | 35.0% |
| GACTACATGGTTATCACAAT+TGG | + | chr1_1:16476857-16476876 | None:intergenic | 35.0% | |
| AATGGAAAATTGCGACTACA+TGG | + | chr1_1:16476870-16476889 | None:intergenic | 35.0% | |
| !! | ATGTCTTATTTACACCATGC+AGG | - | chr1_1:16476958-16476977 | Msa0010910:intron | 35.0% |
| !! | TGTCTTATTTACACCATGCA+GGG | - | chr1_1:16476959-16476978 | Msa0010910:intron | 35.0% |
| AACACAAACTAACCGTATGA+AGG | + | chr1_1:16477162-16477181 | None:intergenic | 35.0% | |
| CTAGTAAAGAAAGTGGTTCA+AGG | - | chr1_1:16477219-16477238 | Msa0010910:CDS | 35.0% | |
| TTTGATCTTGTGAAGCAAAG+AGG | - | chr1_1:16477286-16477305 | Msa0010910:CDS | 35.0% | |
| !! | AAGCAAAGAGGTTGTTTTCA+AGG | - | chr1_1:16477298-16477317 | Msa0010910:CDS | 35.0% |
| ! | TTTTTGGATGGTGAGAATGA+GGG | + | chr1_1:16478043-16478062 | None:intergenic | 35.0% |
| !! | ATTTTTGGATGGTGAGAATG+AGG | + | chr1_1:16478044-16478063 | None:intergenic | 35.0% |
| ! | AGATGGAAGTTACGCATTTT+TGG | + | chr1_1:16478059-16478078 | None:intergenic | 35.0% |
| AAAAGAAGACACCCAATTGT+GGG | + | chr1_1:16478166-16478185 | None:intergenic | 35.0% | |
| AAAAAGAAGACACCCAATTG+TGG | + | chr1_1:16478167-16478186 | None:intergenic | 35.0% | |
| ! | ATACGTTTGGAATACTGCTT+TGG | + | chr1_1:16478303-16478322 | None:intergenic | 35.0% |
| AAGCAGTATTCCAAACGTAT+AGG | - | chr1_1:16478303-16478322 | Msa0010910:intron | 35.0% | |
| ! | GAAATATTGGCCTATACGTT+TGG | + | chr1_1:16478316-16478335 | None:intergenic | 35.0% |
| ATACCAATCGATACCTGTAT+AGG | - | chr1_1:16478406-16478425 | Msa0010910:intron | 35.0% | |
| ACAAGTGCACATATTAGTGT+CGG | - | chr1_1:16478442-16478461 | Msa0010910:intron | 35.0% | |
| ! | ATTTTCACATTCGACGATGT+GGG | - | chr1_1:16478558-16478577 | Msa0010910:CDS | 35.0% |
| ! | ACCAGTTTCACATAGAGTTT+TGG | + | chr1_1:16478604-16478623 | None:intergenic | 35.0% |
| AAAACTCTATGTGAAACTGG+TGG | - | chr1_1:16478603-16478622 | Msa0010910:CDS | 35.0% | |
| !! | TATGCGAAGAGTATTTGGAT+TGG | + | chr1_1:16478863-16478882 | None:intergenic | 35.0% |
| TTCTAAATCGGATATCTCCT+TGG | + | chr1_1:16479270-16479289 | None:intergenic | 35.0% | |
| AAGGAGATATCCGATTTAGA+AGG | - | chr1_1:16479269-16479288 | Msa0010910:intron | 35.0% | |
| TGAAAGCTCACCTTCTAAAT+CGG | + | chr1_1:16479282-16479301 | None:intergenic | 35.0% | |
| TTATCGATATCCGATTCTGA+TGG | - | chr1_1:16479374-16479393 | Msa0010910:intron | 35.0% | |
| AAATATCAGACCTGGACAAA+TGG | - | chr1_1:16479435-16479454 | Msa0010910:intron | 35.0% | |
| ! | AGTTGAGTTTCCTGATCTTT+TGG | - | chr1_1:16479460-16479479 | Msa0010910:intron | 35.0% |
| AAGAGAACATCCAAAAGATC+AGG | + | chr1_1:16479473-16479492 | None:intergenic | 35.0% | |
| ! | TGATCTTTTGGATGTTCTCT+TGG | - | chr1_1:16479472-16479491 | Msa0010910:intron | 35.0% |
| AGAATTCTATTACCGAACGT+AGG | - | chr1_1:16479603-16479622 | Msa0010910:CDS | 35.0% | |
| ! | AGCTAATTTTTGCCTACGTT+CGG | + | chr1_1:16479618-16479637 | None:intergenic | 35.0% |
| GTTTCAGCCCTTAAAAAACT+TGG | - | chr1_1:16479698-16479717 | Msa0010910:CDS | 35.0% | |
| TTCAGCCCTTAAAAAACTTG+GGG | - | chr1_1:16479700-16479719 | Msa0010910:CDS | 35.0% | |
| !!! | ACCATCCCCAAGTTTTTTAA+GGG | + | chr1_1:16479708-16479727 | None:intergenic | 35.0% |
| AGTATAACATGCAAAGTCTC+CGG | - | chr1_1:16479774-16479793 | Msa0010910:CDS | 35.0% | |
| !! | AGTGACTCATTGGCTATTTT+TGG | - | chr1_1:16479875-16479894 | Msa0010910:CDS | 35.0% |
| ATTCTTCTGAACTTGTGATG+TGG | - | chr1_1:16479912-16479931 | Msa0010910:CDS | 35.0% | |
| TTCTTCTGAACTTGTGATGT+GGG | - | chr1_1:16479913-16479932 | Msa0010910:CDS | 35.0% | |
| GAGTGTGTTCAAATAGCATT+GGG | - | chr1_1:16480025-16480044 | Msa0010910:CDS | 35.0% | |
| TCTAATGCTTGTTCAACACT+AGG | + | chr1_1:16480115-16480134 | None:intergenic | 35.0% | |
| CATATCCTCCTAATGCTAAT+CGG | - | chr1_1:16480200-16480219 | Msa0010910:CDS | 35.0% | |
| TTGAAATGCTGTTGTACTAC+CGG | + | chr1_1:16480230-16480249 | None:intergenic | 35.0% | |
| AACCATCAAATTGAAGCGAT+GGG | + | chr1_1:16480272-16480291 | None:intergenic | 35.0% | |
| !!! | TCAGGTGAGACTTTTAGTTT+TGG | - | chr1_1:16480291-16480310 | Msa0010910:CDS | 35.0% |
| !! | AAAAGCACTACCAGAATCAA+TGG | - | chr1_1:16480915-16480934 | Msa0010910:intron | 35.0% |
| CTTACAGGAATCTTGGTTTA+GGG | + | chr1_1:16481079-16481098 | None:intergenic | 35.0% | |
| TATCATCCTTACAGGAATCT+TGG | + | chr1_1:16481086-16481105 | None:intergenic | 35.0% | |
| AAAATCGTCATCCTGAACAA+CGG | - | chr1_1:16481130-16481149 | Msa0010910:intron | 35.0% | |
| ! | TTTGAGCCTGATTTTTACAG+AGG | - | chr1_1:16481218-16481237 | Msa0010910:intron | 35.0% |
| !! | GATTCCGTCTTTGATTTTTC+AGG | - | chr1_1:16481308-16481327 | Msa0010910:intron | 35.0% |
| !!! | TTTTCAGGTATAATGGAACC+TGG | - | chr1_1:16481323-16481342 | Msa0010910:intron | 35.0% |
| ! | TTTCAGGTATAATGGAACCT+GGG | - | chr1_1:16481324-16481343 | Msa0010910:intron | 35.0% |
| TCGATGAAGAATGAACAAGA+AGG | + | chr1_1:16481403-16481422 | None:intergenic | 35.0% | |
| GATATGTGTAACGAGGAAAA+AGG | - | chr1_1:16481544-16481563 | Msa0010910:intron | 35.0% | |
| AAGACTACAGAATCAGATTC+TGG | + | chr1_1:16481571-16481590 | None:intergenic | 35.0% | |
| ! | TTTGTTGAGTTTTACATGCG+GGG | - | chr1_1:16482056-16482075 | Msa0010910:intron | 35.0% |
| TATTCCACTCCATAAAAACC+AGG | + | chr1_1:16482095-16482114 | None:intergenic | 35.0% | |
| !!! | TTTTACATCTTAGTGGGTTC+AGG | - | chr1_1:16482179-16482198 | Msa0010910:intron | 35.0% |
| !! | TCAGTTTTATGAAAAGCTCC+TGG | + | chr1_1:16482473-16482492 | None:intergenic | 35.0% |
| ATAGCAGCAGATATGTTTGT+AGG | - | chr1_1:16482507-16482526 | Msa0010910:intron | 35.0% | |
| TAGCAGCAGATATGTTTGTA+GGG | - | chr1_1:16482508-16482527 | Msa0010910:intron | 35.0% | |
| ! | TTTCAGAAGATCAGAGCTTT+TGG | - | chr1_1:16482589-16482608 | Msa0010910:intron | 35.0% |
| ! | TTCAGAAGATCAGAGCTTTT+GGG | - | chr1_1:16482590-16482609 | Msa0010910:intron | 35.0% |
| !!! | TTTTGGGATGATATTGAGGA+AGG | - | chr1_1:16482606-16482625 | Msa0010910:intron | 35.0% |
| ! | TTTGGGATGATATTGAGGAA+GGG | - | chr1_1:16482607-16482626 | Msa0010910:intron | 35.0% |
| CTGAAACACTGATACCTAAT+AGG | - | chr1_1:16482720-16482739 | Msa0010910:CDS | 35.0% | |
| GAATCAATTCGTGTCCTATT+AGG | + | chr1_1:16482737-16482756 | None:intergenic | 35.0% | |
| ! | TGTTTAAACCACTGGTTGTT+AGG | + | chr1_1:16482854-16482873 | None:intergenic | 35.0% |
| TTTGGATACTCTGCATTCTT+CGG | + | chr1_1:16482936-16482955 | None:intergenic | 35.0% | |
| AAGAAACTTAGCTGTGTATG+TGG | + | chr1_1:16483077-16483096 | None:intergenic | 35.0% | |
| TGTTCATTGTATCAAGCACA+TGG | - | chr1_1:16483459-16483478 | Msa0010910:intron | 35.0% | |
| CGTCCTTTCAAAAACACTTT+AGG | - | chr1_1:16483521-16483540 | Msa0010910:intron | 35.0% | |
| !! | TGCCCTAAAGTGTTTTTGAA+AGG | + | chr1_1:16483527-16483546 | None:intergenic | 35.0% |
| !!! | GAATTTTCTGAAATGGGTGT+TGG | + | chr1_1:16483581-16483600 | None:intergenic | 35.0% |
| AGTTTGCGTCTATTGATCTT+CGG | + | chr1_1:16483731-16483750 | None:intergenic | 35.0% | |
| !! | AGAATGTTGATGGTGAAACA+TGG | + | chr1_1:16483983-16484002 | None:intergenic | 35.0% |
| GCATTTGCAATTGTTTCCAT+TGG | - | chr1_1:16484007-16484026 | Msa0010910:intron | 35.0% | |
| ATTGTTTCCATTGGAAGTTG+TGG | - | chr1_1:16484016-16484035 | Msa0010910:intron | 35.0% | |
| GATGCTATGGAAAGATTAAG+TGG | - | chr1_1:16484132-16484151 | Msa0010910:intron | 35.0% | |
| TCTCCTTCGTGATCTTGTTA+TGG | - | chr1_1:16475479-16475498 | Msa0010910:three_prime_UTR | 40.0% | |
| CGATGATGAAGTCATCTTCA+CGG | - | chr1_1:16475511-16475530 | Msa0010910:three_prime_UTR | 40.0% | |
| CTTATCATTGAGAGAAGAGG+TGG | + | chr1_1:16475640-16475659 | None:intergenic | 40.0% | |
| CACCTCTTCTCTCAATGATA+AGG | - | chr1_1:16475638-16475657 | Msa0010910:CDS | 40.0% | |
| CATGTGACACATGTTTGGAT+TGG | + | chr1_1:16476175-16476194 | None:intergenic | 40.0% | |
| ACGCCTTCGATAGAAAATGT+TGG | + | chr1_1:16476205-16476224 | None:intergenic | 40.0% | |
| TGAAGGTAATCACGTGTGTT+GGG | + | chr1_1:16476270-16476289 | None:intergenic | 40.0% | |
| TTGAAGGTAATCACGTGTGT+TGG | + | chr1_1:16476271-16476290 | None:intergenic | 40.0% | |
| !! | ATTATCGGTGCCAACATGTT+AGG | - | chr1_1:16476312-16476331 | Msa0010910:intron | 40.0% |
| CAATTGCGACAACAAGATAC+AGG | + | chr1_1:16476546-16476565 | None:intergenic | 40.0% | |
| GGATATTAGCTGGTATCATC+TGG | + | chr1_1:16476604-16476623 | None:intergenic | 40.0% | |
| GATTGACAGAGGATATTAGC+TGG | + | chr1_1:16476614-16476633 | None:intergenic | 40.0% | |
| GTTCGTATACTTGGTTGAAC+AGG | - | chr1_1:16476672-16476691 | Msa0010910:intron | 40.0% | |
| !!! | CTTTTTTTCTCGTTTTCCCC+AGG | - | chr1_1:16477049-16477068 | Msa0010910:intron | 40.0% |
| CTAACTATGCAGCCTTCATA+CGG | - | chr1_1:16477147-16477166 | Msa0010910:intron | 40.0% | |
| GGTACAAACACATCTTTCTC+TGG | - | chr1_1:16477853-16477872 | Msa0010910:intron | 40.0% | |
| ! | TTTTGGATGGTGAGAATGAG+GGG | + | chr1_1:16478042-16478061 | None:intergenic | 40.0% |
| !! | GGAAGTTACGCATTTTTGGA+TGG | + | chr1_1:16478055-16478074 | None:intergenic | 40.0% |
| TCATGACATGATGAAGAGCA+AGG | - | chr1_1:16478232-16478251 | Msa0010910:intron | 40.0% | |
| !! | CTTCCTATACAGGTATCGAT+TGG | + | chr1_1:16478412-16478431 | None:intergenic | 40.0% |
| GTGCAATACTCTTCCTATAC+AGG | + | chr1_1:16478422-16478441 | None:intergenic | 40.0% | |
| ! | GCACATATTAGTGTCGGATA+CGG | - | chr1_1:16478448-16478467 | Msa0010910:intron | 40.0% |
| ! | CACATATTAGTGTCGGATAC+GGG | - | chr1_1:16478449-16478468 | Msa0010910:intron | 40.0% |
| ! | GATTTTCACATTCGACGATG+TGG | - | chr1_1:16478557-16478576 | Msa0010910:CDS | 40.0% |
| ! | TTTTCACATTCGACGATGTG+GGG | - | chr1_1:16478559-16478578 | Msa0010910:CDS | 40.0% |
| !! | AGAGTTTTGGCAATACGAAG+TGG | + | chr1_1:16478591-16478610 | None:intergenic | 40.0% |
| GCCAAAACTCTATGTGAAAC+TGG | - | chr1_1:16478600-16478619 | Msa0010910:CDS | 40.0% | |
| TGGTGGCTACATAATTCCAT+TGG | - | chr1_1:16478620-16478639 | Msa0010910:CDS | 40.0% | |
| ! | TTGGATTTGCTCAAAGCATG+CGG | - | chr1_1:16478686-16478705 | Msa0010910:CDS | 40.0% |
| CCACTTTGCCATTAGACAAT+TGG | + | chr1_1:16478756-16478775 | None:intergenic | 40.0% | |
| CCAATTGTCTAATGGCAAAG+TGG | - | chr1_1:16478753-16478772 | Msa0010910:CDS | 40.0% | |
| ! | AGGAAGTACAATCCAGAACT+GGG | + | chr1_1:16478792-16478811 | None:intergenic | 40.0% |
| !! | TATTTTGAGGGTGCAGAAGA+GGG | - | chr1_1:16478823-16478842 | Msa0010910:CDS | 40.0% |
| GAGAATTATCTCCCTGTATG+TGG | - | chr1_1:16479031-16479050 | Msa0010910:intron | 40.0% | |
| CCAGATTTACACCACATACA+GGG | + | chr1_1:16479045-16479064 | None:intergenic | 40.0% | |
| CCTGTATGTGGTGTAAATCT+GGG | - | chr1_1:16479043-16479062 | Msa0010910:intron | 40.0% | |
| ATGTGGTGTAAATCTGGGTA+TGG | - | chr1_1:16479048-16479067 | Msa0010910:intron | 40.0% | |
| TAAATCTGGGTATGGCAGTT+GGG | - | chr1_1:16479056-16479075 | Msa0010910:intron | 40.0% | |
| AGTGGATAGTAGGTTTCTGA+TGG | + | chr1_1:16479306-16479325 | None:intergenic | 40.0% | |
| ATGTATCAAGGTTGCTTGAG+TGG | + | chr1_1:16479324-16479343 | None:intergenic | 40.0% | |
| ACTCAAGCAACCTTGATACA+TGG | - | chr1_1:16479323-16479342 | Msa0010910:intron | 40.0% | |
| AGCAACCTTGATACATGGTT+TGG | - | chr1_1:16479328-16479347 | Msa0010910:intron | 40.0% | |
| TGAATCGATGTGAACTCCAT+CGG | + | chr1_1:16479354-16479373 | None:intergenic | 40.0% | |
| ACTCAACTAACCATTTGTCC+AGG | + | chr1_1:16479448-16479467 | None:intergenic | 40.0% | |
| GCAGAGACAGAAGTAAAGAT+GGG | + | chr1_1:16479583-16479602 | None:intergenic | 40.0% | |
| TGCAGAGACAGAAGTAAAGA+TGG | + | chr1_1:16479584-16479603 | None:intergenic | 40.0% | |
| !!! | GACCATCCCCAAGTTTTTTA+AGG | + | chr1_1:16479709-16479728 | None:intergenic | 40.0% |
| AGTATATGCTCCTCCATATG+AGG | + | chr1_1:16479810-16479829 | None:intergenic | 40.0% | |
| !!! | CTCATTGGCTATTTTTGGTG+AGG | - | chr1_1:16479880-16479899 | Msa0010910:CDS | 40.0% |
| ACAAGTTCAGAAGAATACGC+TGG | + | chr1_1:16479908-16479927 | None:intergenic | 40.0% | |
| !! | AACAGAAGCATTTGCTCTTC+TGG | - | chr1_1:16479946-16479965 | Msa0010910:CDS | 40.0% |
| CATTTGCTCTTCTGGTGAAA+AGG | - | chr1_1:16479954-16479973 | Msa0010910:CDS | 40.0% | |
| GGAGTGTGTTCAAATAGCAT+TGG | - | chr1_1:16480024-16480043 | Msa0010910:CDS | 40.0% | |
| TGCTCATTATTAGAAGCTCG+TGG | - | chr1_1:16480052-16480071 | Msa0010910:CDS | 40.0% | |
| GAACCATCAAATTGAAGCGA+TGG | + | chr1_1:16480273-16480292 | None:intergenic | 40.0% | |
| ! | TCGCTTCAATTTGATGGTTC+AGG | - | chr1_1:16480273-16480292 | Msa0010910:CDS | 40.0% |
| AATAGTGATATAGCAGCCGT+TGG | - | chr1_1:16480356-16480375 | Msa0010910:CDS | 40.0% | |
| ATAGTGATATAGCAGCCGTT+GGG | - | chr1_1:16480357-16480376 | Msa0010910:CDS | 40.0% | |
| AACTACTCACATTGTCCCAA+CGG | + | chr1_1:16480375-16480394 | None:intergenic | 40.0% | |
| CAAACTACATAAGGGAAACG+TGG | + | chr1_1:16480741-16480760 | None:intergenic | 40.0% | |
| CGTTTCCCTTATGTAGTTTG+TGG | - | chr1_1:16480741-16480760 | Msa0010910:intron | 40.0% | |
| GCTTATACAGGACTTCTTTG+AGG | - | chr1_1:16480804-16480823 | Msa0010910:intron | 40.0% | |
| !! | TCTTCTTCGTCCATTGATTC+TGG | + | chr1_1:16480928-16480947 | None:intergenic | 40.0% |
| !! | GAAGAAAGCTTTGAGGATTC+TGG | - | chr1_1:16480943-16480962 | Msa0010910:intron | 40.0% |
| TAGTTCATCAGCCAGTAATG+AGG | + | chr1_1:16481028-16481047 | None:intergenic | 40.0% | |
| CCTTACAGGAATCTTGGTTT+AGG | + | chr1_1:16481080-16481099 | None:intergenic | 40.0% | |
| CCTAAACCAAGATTCCTGTA+AGG | - | chr1_1:16481077-16481096 | Msa0010910:intron | 40.0% | |
| TCTACGGTTATCATCCTTAC+AGG | + | chr1_1:16481094-16481113 | None:intergenic | 40.0% | |
| ! | ATGACGATTTTGCCTTTCTG+TGG | + | chr1_1:16481121-16481140 | None:intergenic | 40.0% |
| AAATCGTCATCCTGAACAAC+GGG | - | chr1_1:16481131-16481150 | Msa0010910:intron | 40.0% | |
| AAATCAGGCTCAAAGCATGT+TGG | + | chr1_1:16481212-16481231 | None:intergenic | 40.0% | |
| ! | AGCCTGATTTTTACAGAGGA+TGG | - | chr1_1:16481222-16481241 | Msa0010910:intron | 40.0% |
| CACCATCCTCTGTAAAAATC+AGG | + | chr1_1:16481227-16481246 | None:intergenic | 40.0% | |
| GAAATGCGGATGAAGTTGAA+TGG | - | chr1_1:16481286-16481305 | Msa0010910:intron | 40.0% | |
| ACACTTCTCATGCATAACAC+TGG | + | chr1_1:16481454-16481473 | None:intergenic | 40.0% | |
| ! | CCTGCTCTTTTCTTCTTGTT+GGG | - | chr1_1:16481506-16481525 | Msa0010910:intron | 40.0% |
| TTGTTGGGAACTTCTCTGTT+GGG | - | chr1_1:16481521-16481540 | Msa0010910:intron | 40.0% | |
| AACATTCGAAACTGTGGACA+AGG | + | chr1_1:16481675-16481694 | None:intergenic | 40.0% | |
| TTGTCCACAGTTTCGAATGT+TGG | - | chr1_1:16481674-16481693 | Msa0010910:intron | 40.0% | |
| TTAGCCAACATTCGAAACTG+TGG | + | chr1_1:16481681-16481700 | None:intergenic | 40.0% | |
| ATTTCCTTCTGTGGACAAAG+AGG | + | chr1_1:16481962-16481981 | None:intergenic | 40.0% | |
| !! | ATCTCCTGGTTTTTATGGAG+TGG | - | chr1_1:16482088-16482107 | Msa0010910:intron | 40.0% |
| AGCAGATATGTTTGTAGGGA+GGG | - | chr1_1:16482512-16482531 | Msa0010910:intron | 40.0% | |
| !!! | GAGCTTTTGGGATGATATTG+AGG | - | chr1_1:16482602-16482621 | Msa0010910:intron | 40.0% |
| ! | ATTTGGGACGCATCTTTGTA+AGG | - | chr1_1:16482782-16482801 | Msa0010910:intron | 40.0% |
| !! | CATCTTTGTAAGGCTAGTCT+TGG | - | chr1_1:16482792-16482811 | Msa0010910:intron | 40.0% |
| TGGTTGTTAGGAACTTGGAT+AGG | + | chr1_1:16482842-16482861 | None:intergenic | 40.0% | |
| AGCAATACATGCGGTTATGT+TGG | + | chr1_1:16483666-16483685 | None:intergenic | 40.0% | |
| ! | ATGTCAGCATTTTCTGCAAC+AGG | - | chr1_1:16483918-16483937 | Msa0010910:intron | 40.0% |
| ! | TGTCAGCATTTTCTGCAACA+GGG | - | chr1_1:16483919-16483938 | Msa0010910:intron | 40.0% |
| ! | ATGATGTTTTTCTCACCCCT+TGG | - | chr1_1:16484353-16484372 | Msa0010910:five_prime_UTR | 40.0% |
| !! | AAAAATGAAAGGGGTGCCAA+GGG | + | chr1_1:16484372-16484391 | None:intergenic | 40.0% |
| AAACGCAAGCCAAATTTGAC+GGG | + | chr1_1:16484455-16484474 | None:intergenic | 40.0% | |
| CAAACGCAAGCCAAATTTGA+CGG | + | chr1_1:16484456-16484475 | None:intergenic | 40.0% | |
| CTCTATGATCCCTAACCAAG+CGG | + | chr1_1:16475284-16475303 | None:intergenic | 45.0% | |
| ! | CCTTCGTGATCTTGTTATGG+CGG | - | chr1_1:16475482-16475501 | Msa0010910:three_prime_UTR | 45.0% |
| ATCTTCACGGTCAAGAGCTA+CGG | - | chr1_1:16475524-16475543 | Msa0010910:three_prime_UTR | 45.0% | |
| GCGGCGAGTGTTAAAGAAAA+TGG | - | chr1_1:16475546-16475565 | Msa0010910:three_prime_UTR | 45.0% | |
| TTAGAAACAACGGGGCTGTT+TGG | - | chr1_1:16475971-16475990 | Msa0010910:CDS | 45.0% | |
| TGTTGGGGTTATGTTGGTGT+GGG | + | chr1_1:16476254-16476273 | None:intergenic | 45.0% | |
| GAAGGTAATCACGTGTGTTG+GGG | + | chr1_1:16476269-16476288 | None:intergenic | 45.0% | |
| CAAGATACAGGCAGGTTTGA+GGG | + | chr1_1:16476534-16476553 | None:intergenic | 45.0% | |
| ACAAGATACAGGCAGGTTTG+AGG | + | chr1_1:16476535-16476554 | None:intergenic | 45.0% | |
| TCGCAATTGCAGTTGTTGAC+CGG | - | chr1_1:16476557-16476576 | Msa0010910:intron | 45.0% | |
| CAAGAAATCTTCTCCCTGCA+TGG | + | chr1_1:16476975-16476994 | None:intergenic | 45.0% | |
| !! | CAAAGCATCACCTTGCTGTT+CGG | - | chr1_1:16477344-16477363 | Msa0010910:intron | 45.0% |
| ACAGATGGGTGAGATAGAAG+AGG | - | chr1_1:16477554-16477573 | Msa0010910:intron | 45.0% | |
| !! | TTCAGGTACTGGTTGTCTGA+CGG | - | chr1_1:16477586-16477605 | Msa0010910:intron | 45.0% |
| TCCCCTATTGTCCCACAATT+GGG | - | chr1_1:16478152-16478171 | Msa0010910:intron | 45.0% | |
| ACCCAATTGTGGGACAATAG+GGG | + | chr1_1:16478156-16478175 | None:intergenic | 45.0% | |
| CACCCAATTGTGGGACAATA+GGG | + | chr1_1:16478157-16478176 | None:intergenic | 45.0% | |
| ACACCCAATTGTGGGACAAT+AGG | + | chr1_1:16478158-16478177 | None:intergenic | 45.0% | |
| CACTACTACATATGTGCGCA+TGG | + | chr1_1:16478371-16478390 | None:intergenic | 45.0% | |
| !! | AAAAGCTTGAAGGGCACCAA+TGG | + | chr1_1:16478639-16478658 | None:intergenic | 45.0% |
| ! | GAGGAAGTACAATCCAGAAC+TGG | + | chr1_1:16478793-16478812 | None:intergenic | 45.0% |
| !! | GTATTTTGAGGGTGCAGAAG+AGG | - | chr1_1:16478822-16478841 | Msa0010910:CDS | 45.0% |
| !! | ATTTTGAGGGTGCAGAAGAG+GGG | - | chr1_1:16478824-16478843 | Msa0010910:CDS | 45.0% |
| CCCTGTATGTGGTGTAAATC+TGG | - | chr1_1:16479042-16479061 | Msa0010910:intron | 45.0% | |
| CCCAGATTTACACCACATAC+AGG | + | chr1_1:16479046-16479065 | None:intergenic | 45.0% | |
| GTAAATCTGGGTATGGCAGT+TGG | - | chr1_1:16479055-16479074 | Msa0010910:intron | 45.0% | |
| AAATCTGGGTATGGCAGTTG+GGG | - | chr1_1:16479057-16479076 | Msa0010910:intron | 45.0% | |
| AGGTTGCTTGAGTGGATAGT+AGG | + | chr1_1:16479316-16479335 | None:intergenic | 45.0% | |
| ATCGGCCAAACCATGTATCA+AGG | + | chr1_1:16479336-16479355 | None:intergenic | 45.0% | |
| ! | TTGATACATGGTTTGGCCGA+TGG | - | chr1_1:16479335-16479354 | Msa0010910:intron | 45.0% |
| TGGATGTTCTCTTGGCTGAA+AGG | - | chr1_1:16479480-16479499 | Msa0010910:intron | 45.0% | |
| AAGGCGAGTAGAAGAAGCTT+TGG | - | chr1_1:16479499-16479518 | Msa0010910:intron | 45.0% | |
| ACGTTCTCCTTCATCAAGAG+CGG | + | chr1_1:16479525-16479544 | None:intergenic | 45.0% | |
| ATGCACGAAGTTCAGATCCA+CGG | + | chr1_1:16479676-16479695 | None:intergenic | 45.0% | |
| GCCCTTAAAAAACTTGGGGA+TGG | - | chr1_1:16479704-16479723 | Msa0010910:CDS | 45.0% | |
| ! | CCTCCATATGAGGTGTTTGA+CGG | + | chr1_1:16479800-16479819 | None:intergenic | 45.0% |
| ACAAGCTGCAAGTGACTCAT+TGG | - | chr1_1:16479865-16479884 | Msa0010910:CDS | 45.0% | |
| !! | ACAAGAGAGTACTGCTGCTA+TGG | - | chr1_1:16480153-16480172 | Msa0010910:CDS | 45.0% |
| TATGGCTGCTGCTGATGATT+GGG | - | chr1_1:16480171-16480190 | Msa0010910:CDS | 45.0% | |
| TGCCCATCGCTTCAATTTGA+TGG | - | chr1_1:16480267-16480286 | Msa0010910:CDS | 45.0% | |
| ! | CAGGACTTCTTTGAGGATGT+AGG | - | chr1_1:16480811-16480830 | Msa0010910:intron | 45.0% |
| ACCTCTGCTTAGTATGCAGT+TGG | - | chr1_1:16480834-16480853 | Msa0010910:intron | 45.0% | |
| CCTCTGCTTAGTATGCAGTT+GGG | - | chr1_1:16480835-16480854 | Msa0010910:intron | 45.0% | |
| GGACGAAGAAGAAAGCTTTG+AGG | - | chr1_1:16480936-16480955 | Msa0010910:intron | 45.0% | |
| AATCTGCTGGGCTTCAGTTT+CGG | + | chr1_1:16480989-16481008 | None:intergenic | 45.0% | |
| GCTAGCTAATGCCTCATTAC+TGG | - | chr1_1:16481014-16481033 | Msa0010910:intron | 45.0% | |
| ACAGGAATCTTGGTTTAGGG+AGG | + | chr1_1:16481076-16481095 | None:intergenic | 45.0% | |
| ACCGTAGAAGAACCACAGAA+AGG | - | chr1_1:16481106-16481125 | Msa0010910:intron | 45.0% | |
| GCCTTTCTGTGGTTCTTCTA+CGG | + | chr1_1:16481110-16481129 | None:intergenic | 45.0% | |
| GGCAGAAAGGAAAAGTAGAG+AGG | + | chr1_1:16481488-16481507 | None:intergenic | 45.0% | |
| GAAGAAAAGAGCAGGCAGAA+AGG | + | chr1_1:16481501-16481520 | None:intergenic | 45.0% | |
| ! | GCCTGCTCTTTTCTTCTTGT+TGG | - | chr1_1:16481505-16481524 | Msa0010910:intron | 45.0% |
| CCCAACAAGAAGAAAAGAGC+AGG | + | chr1_1:16481509-16481528 | None:intergenic | 45.0% | |
| CTTGTTGGGAACTTCTCTGT+TGG | - | chr1_1:16481520-16481539 | Msa0010910:intron | 45.0% | |
| TGTTGGGAACTTCTCTGTTG+GGG | - | chr1_1:16481522-16481541 | Msa0010910:intron | 45.0% | |
| TGTTGGGGATATGTGTAACG+AGG | - | chr1_1:16481537-16481556 | Msa0010910:intron | 45.0% | |
| !! | GAAACTCTTACGGCATTGAC+TGG | - | chr1_1:16481797-16481816 | Msa0010910:intron | 45.0% |
| TGTTCCTCTTTGTCCACAGA+AGG | - | chr1_1:16481955-16481974 | Msa0010910:intron | 45.0% | |
| AGTTGTCTACCTAGGGACAT+GGG | + | chr1_1:16482158-16482177 | None:intergenic | 45.0% | |
| AAGTTGTCTACCTAGGGACA+TGG | + | chr1_1:16482159-16482178 | None:intergenic | 45.0% | |
| CAGCAGATATGTTTGTAGGG+AGG | - | chr1_1:16482511-16482530 | Msa0010910:intron | 45.0% | |
| ATGATATTGAGGAAGGGCCA+AGG | - | chr1_1:16482613-16482632 | Msa0010910:intron | 45.0% | |
| TGTAGACCAAGAGGACCTAA+AGG | + | chr1_1:16482639-16482658 | None:intergenic | 45.0% | |
| CATACCTGTTGTAGACCAAG+AGG | + | chr1_1:16482648-16482667 | None:intergenic | 45.0% | |
| AACTTGGATAGGTCAGTGCT+TGG | + | chr1_1:16482831-16482850 | None:intergenic | 45.0% | |
| TCCAAGTTCCTAACAACCAG+TGG | - | chr1_1:16482843-16482862 | Msa0010910:intron | 45.0% | |
| ! | ACCACTGGTTGTTAGGAACT+TGG | + | chr1_1:16482847-16482866 | None:intergenic | 45.0% |
| ! | GTTGTGTGTTTTGCCTCCAA+CGG | - | chr1_1:16483840-16483859 | Msa0010910:intron | 45.0% |
| ! | AGCATTTTCTGCAACAGGGA+TGG | - | chr1_1:16483923-16483942 | Msa0010910:intron | 45.0% |
| TTCAGAGCCACAACTTCCAA+TGG | + | chr1_1:16484026-16484045 | None:intergenic | 45.0% | |
| GTGATCTGCCTGAAGATGAA+TGG | - | chr1_1:16484091-16484110 | Msa0010910:intron | 45.0% | |
| CTCTCCCCGTTTATTTCCTT+TGG | + | chr1_1:16484162-16484181 | None:intergenic | 45.0% | |
| !! | AAAATGAAAGGGGTGCCAAG+GGG | + | chr1_1:16484371-16484390 | None:intergenic | 45.0% |
| !! | CAAAAATGAAAGGGGTGCCA+AGG | + | chr1_1:16484373-16484392 | None:intergenic | 45.0% |
| CCGCCATAACAAGATCACGA+AGG | + | chr1_1:16475485-16475504 | None:intergenic | 50.0% | |
| ! | TCGTGATCTTGTTATGGCGG+CGG | - | chr1_1:16475485-16475504 | Msa0010910:three_prime_UTR | 50.0% |
| ACACTGATACGTGTCGGACA+CGG | + | chr1_1:16476231-16476250 | None:intergenic | 50.0% | |
| TGTGGGACACTGATACGTGT+CGG | + | chr1_1:16476237-16476256 | None:intergenic | 50.0% | |
| GTGTTGGGGTTATGTTGGTG+TGG | + | chr1_1:16476255-16476274 | None:intergenic | 50.0% | |
| CACGTGTGTTGGGGTTATGT+TGG | + | chr1_1:16476260-16476279 | None:intergenic | 50.0% | |
| TGCGACAACAAGATACAGGC+AGG | + | chr1_1:16476542-16476561 | None:intergenic | 50.0% | |
| CTTGAAAAGAGCTTCTGCCG+AGG | - | chr1_1:16477103-16477122 | Msa0010910:intron | 50.0% | |
| CCAAGACTCACCCAACTAGT+GGG | - | chr1_1:16477367-16477386 | Msa0010910:intron | 50.0% | |
| GCACTAAGCTCCCACTAGTT+GGG | + | chr1_1:16477380-16477399 | None:intergenic | 50.0% | |
| TGCACTAAGCTCCCACTAGT+TGG | + | chr1_1:16477381-16477400 | None:intergenic | 50.0% | |
| GGTGAGATAGAAGAGGCAGT+GGG | - | chr1_1:16477561-16477580 | Msa0010910:intron | 50.0% | |
| GTGAGATAGAAGAGGCAGTG+GGG | - | chr1_1:16477562-16477581 | Msa0010910:intron | 50.0% | |
| CAATTGTGGGACAATAGGGG+AGG | + | chr1_1:16478153-16478172 | None:intergenic | 50.0% | |
| CTCCCCTATTGTCCCACAAT+TGG | - | chr1_1:16478151-16478170 | Msa0010910:intron | 50.0% | |
| TACAATCCAGAACTGGGCTG+TGG | + | chr1_1:16478786-16478805 | None:intergenic | 50.0% | |
| !! | TTTTGAGGGTGCAGAAGAGG+GGG | - | chr1_1:16478825-16478844 | Msa0010910:CDS | 50.0% |
| AATCTGGGTATGGCAGTTGG+GGG | - | chr1_1:16479058-16479077 | Msa0010910:intron | 50.0% | |
| AGTTCAGATCCACGGGTAGA+AGG | + | chr1_1:16479668-16479687 | None:intergenic | 50.0% | |
| TGCACGAAGTTCAGATCCAC+GGG | + | chr1_1:16479675-16479694 | None:intergenic | 50.0% | |
| AGTAGCAAGCTGTGAGCATG+CGG | + | chr1_1:16479731-16479750 | None:intergenic | 50.0% | |
| ! | CATATGAGGTGTTTGACGGC+CGG | + | chr1_1:16479796-16479815 | None:intergenic | 50.0% |
| CCGTCAAACACCTCATATGG+AGG | - | chr1_1:16479797-16479816 | Msa0010910:CDS | 50.0% | |
| ! | TACTGCAGCTCTAGCACAAC+TGG | - | chr1_1:16479826-16479845 | Msa0010910:CDS | 50.0% |
| AGGAGGTTTAAGAGCTGCTG+CGG | - | chr1_1:16480003-16480022 | Msa0010910:CDS | 50.0% | |
| CTATGGCTGCTGCTGATGAT+TGG | - | chr1_1:16480170-16480189 | Msa0010910:CDS | 50.0% | |
| ! | GTCTGCCGATTAGCATTAGG+AGG | + | chr1_1:16480208-16480227 | None:intergenic | 50.0% |
| CCTAATGCTAATCGGCAGAC+CGG | - | chr1_1:16480208-16480227 | Msa0010910:CDS | 50.0% | |
| CCCAACTGCATACTAAGCAG+AGG | + | chr1_1:16480838-16480857 | None:intergenic | 50.0% | |
| CTGCTTAGTATGCAGTTGGG+AGG | - | chr1_1:16480838-16480857 | Msa0010910:intron | 50.0% | |
| AGCTAGCAGTGCAATCTGCT+GGG | + | chr1_1:16481001-16481020 | None:intergenic | 50.0% | |
| TAGCTAGCAGTGCAATCTGC+TGG | + | chr1_1:16481002-16481021 | None:intergenic | 50.0% | |
| GTTTAGGGAGGAGAGCTTCA+TGG | + | chr1_1:16481064-16481083 | None:intergenic | 50.0% | |
| GTCATCCTGAACAACGGGAA+TGG | - | chr1_1:16481136-16481155 | Msa0010910:intron | 50.0% | |
| ATCCTGAACAACGGGAATGG+AGG | - | chr1_1:16481139-16481158 | Msa0010910:intron | 50.0% | |
| !! | CATCTTAGTGGGTTCAGGCT+TGG | - | chr1_1:16482184-16482203 | Msa0010910:intron | 50.0% |
| AGGTCCTCTTGGTCTACAAC+AGG | - | chr1_1:16482641-16482660 | Msa0010910:intron | 50.0% | |
| AAGGACGGCCAGAATCCAAA+AGG | + | chr1_1:16483508-16483527 | None:intergenic | 50.0% | |
| ! | TGTGTTTTGCCTCCAACGGT+CGG | - | chr1_1:16483844-16483863 | Msa0010910:intron | 50.0% |
| TGACAAATACCGACCGTTGG+AGG | + | chr1_1:16483856-16483875 | None:intergenic | 50.0% | |
| CCTTGACAAATACCGACCGT+TGG | + | chr1_1:16483859-16483878 | None:intergenic | 50.0% | |
| CCAACGGTCGGTATTTGTCA+AGG | - | chr1_1:16483856-16483875 | Msa0010910:intron | 50.0% | |
| CAACAGGGATGGATCCGTAT+AGG | - | chr1_1:16483934-16483953 | Msa0010910:intron | 50.0% | |
| GTGCAGAGACAGATGCAGTA+GGG | + | chr1_1:16484197-16484216 | None:intergenic | 50.0% | |
| TGTGCAGAGACAGATGCAGT+AGG | + | chr1_1:16484198-16484217 | None:intergenic | 50.0% | |
| TCACGCGCACTGTGTGTGTT+TGG | + | chr1_1:16475337-16475356 | None:intergenic | 55.0% | |
| TTCACGGTCAAGAGCTACGG+CGG | - | chr1_1:16475527-16475546 | Msa0010910:three_prime_UTR | 55.0% | |
| CACTGATACGTGTCGGACAC+GGG | + | chr1_1:16476230-16476249 | None:intergenic | 55.0% | |
| GACACTTCTGCGCATCTCCT+CGG | + | chr1_1:16477123-16477142 | None:intergenic | 55.0% | |
| TGAGTCTTGGCCGAACAGCA+AGG | + | chr1_1:16477357-16477376 | None:intergenic | 55.0% | |
| GCCAAGACTCACCCAACTAG+TGG | - | chr1_1:16477366-16477385 | Msa0010910:intron | 55.0% | |
| CCCACTAGTTGGGTGAGTCT+TGG | + | chr1_1:16477370-16477389 | None:intergenic | 55.0% | |
| GGGTGAGATAGAAGAGGCAG+TGG | - | chr1_1:16477560-16477579 | Msa0010910:intron | 55.0% | |
| AGAAGAGGCAGTGGGGTTTC+AGG | - | chr1_1:16477569-16477588 | Msa0010910:intron | 55.0% | |
| ATCTGGGTATGGCAGTTGGG+GGG | - | chr1_1:16479059-16479078 | Msa0010910:intron | 55.0% | |
| GCTTTGGCCGCTCTTGATGA+AGG | - | chr1_1:16479515-16479534 | Msa0010910:intron | 55.0% | |
| CGGCCGTCAAACACCTCATA+TGG | - | chr1_1:16479794-16479813 | Msa0010910:CDS | 55.0% | |
| TTGGCTTCATCAGCAGCTGC+AGG | - | chr1_1:16479983-16480002 | Msa0010910:CDS | 55.0% | |
| ! | CCGGTCTGCCGATTAGCATT+AGG | + | chr1_1:16480211-16480230 | None:intergenic | 55.0% |
| !! | TTGGGAGGACAAGCTCTGGA+AGG | - | chr1_1:16480853-16480872 | Msa0010910:intron | 55.0% |
| !! | TGGGAGGACAAGCTCTGGAA+GGG | - | chr1_1:16480854-16480873 | Msa0010910:intron | 55.0% |
| CTCCTCCATTCCCGTTGTTC+AGG | + | chr1_1:16481144-16481163 | None:intergenic | 55.0% | |
| GAATGGAGGAGACGACTCGT+GGG | - | chr1_1:16481153-16481172 | Msa0010910:intron | 55.0% | |
| GACTCGTGGGTTCAGTTGAC+AGG | - | chr1_1:16481166-16481185 | Msa0010910:intron | 55.0% | |
| CGGGGTGCATATCTATCTCC+TGG | - | chr1_1:16482074-16482093 | Msa0010910:intron | 55.0% | |
| TGTCTACCTAGGGACATGGG+AGG | + | chr1_1:16482155-16482174 | None:intergenic | 55.0% | |
| CCAAGAGGACCTAAAGGCCT+TGG | + | chr1_1:16482633-16482652 | None:intergenic | 55.0% | |
| CCAAGGCCTTTAGGTCCTCT+TGG | - | chr1_1:16482630-16482649 | Msa0010910:intron | 55.0% | |
| TAGATTGGCGCGTGTGTGCG+TGG | - | chr1_1:16475423-16475442 | Msa0010910:three_prime_UTR | 60.0% | |
| ! | GGCAGTGGGGTTTCAGGTAC+TGG | - | chr1_1:16477575-16477594 | Msa0010910:intron | 60.0% |
| TCTGGGTATGGCAGTTGGGG+GGG | - | chr1_1:16479060-16479079 | Msa0010910:intron | 60.0% | |
| GCTTGTCAGCCTTCTACCCG+TGG | - | chr1_1:16479656-16479675 | Msa0010910:CDS | 60.0% | |
| GCTTCATCAGCAGCTGCAGG+AGG | - | chr1_1:16479986-16480005 | Msa0010910:CDS | 60.0% | |
| GCAGTTGGGAGGACAAGCTC+TGG | - | chr1_1:16480849-16480868 | Msa0010910:intron | 60.0% | |
| GGAATGGAGGAGACGACTCG+TGG | - | chr1_1:16481152-16481171 | Msa0010910:intron | 60.0% | |
| GAAGCTCCTCCCATGTCCCT+AGG | - | chr1_1:16482146-16482165 | Msa0010910:intron | 60.0% | |
| GAGGAAGGGCCAAGGCCTTT+AGG | - | chr1_1:16482621-16482640 | Msa0010910:intron | 60.0% | |
| GCTCTGCCACAGCCCAGTTC+TGG | - | chr1_1:16478777-16478796 | Msa0010910:CDS | 65.0% | |
| CTGGGTATGGCAGTTGGGGG+GGG | - | chr1_1:16479061-16479080 | Msa0010910:intron | 65.0% | |
| TGGGTATGGCAGTTGGGGGG+GGG | - | chr1_1:16479062-16479081 | Msa0010910:intron | 65.0% | |
| GAGAGCTTCATGGCTGCGCG+TGG | + | chr1_1:16481054-16481073 | None:intergenic | 65.0% | |
| GGGTATGGCAGTTGGGGGGG+GGG | - | chr1_1:16479063-16479082 | Msa0010910:intron | 70.0% | |
| GGTATGGCAGTTGGGGGGGG+GGG | - | chr1_1:16479064-16479083 | Msa0010910:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 16475279 | 16484541 | 16475279 | ID=Msa0010910;Name=Msa0010910 |
| chr1_1 | mRNA | 16475279 | 16484541 | 16475279 | ID=Msa0010910-mRNA-1;Parent=Msa0010910;Name=Msa0010910-mRNA-1;_AED=0.05;_eAED=0.05;_QI=219|1|1|1|1|1|7|287|765 |
| chr1_1 | exon | 16475279 | 16475728 | 16475279 | ID=Msa0010910-mRNA-1:exon:6032;Parent=Msa0010910-mRNA-1 |
| chr1_1 | exon | 16475865 | 16476001 | 16475865 | ID=Msa0010910-mRNA-1:exon:6031;Parent=Msa0010910-mRNA-1 |
| chr1_1 | exon | 16477158 | 16477346 | 16477158 | ID=Msa0010910-mRNA-1:exon:6030;Parent=Msa0010910-mRNA-1 |
| chr1_1 | exon | 16478491 | 16479006 | 16478491 | ID=Msa0010910-mRNA-1:exon:6029;Parent=Msa0010910-mRNA-1 |
| chr1_1 | exon | 16479526 | 16480558 | 16479526 | ID=Msa0010910-mRNA-1:exon:6028;Parent=Msa0010910-mRNA-1 |
| chr1_1 | exon | 16482652 | 16482749 | 16482652 | ID=Msa0010910-mRNA-1:exon:6027;Parent=Msa0010910-mRNA-1 |
| chr1_1 | exon | 16484161 | 16484541 | 16484161 | ID=Msa0010910-mRNA-1:exon:6026;Parent=Msa0010910-mRNA-1 |
| chr1_1 | five_prime_UTR | 16484323 | 16484541 | 16484323 | ID=Msa0010910-mRNA-1:five_prime_utr;Parent=Msa0010910-mRNA-1 |
| chr1_1 | CDS | 16484161 | 16484322 | 16484161 | ID=Msa0010910-mRNA-1:cds;Parent=Msa0010910-mRNA-1 |
| chr1_1 | CDS | 16482652 | 16482749 | 16482652 | ID=Msa0010910-mRNA-1:cds;Parent=Msa0010910-mRNA-1 |
| chr1_1 | CDS | 16479526 | 16480558 | 16479526 | ID=Msa0010910-mRNA-1:cds;Parent=Msa0010910-mRNA-1 |
| chr1_1 | CDS | 16478491 | 16479006 | 16478491 | ID=Msa0010910-mRNA-1:cds;Parent=Msa0010910-mRNA-1 |
| chr1_1 | CDS | 16477158 | 16477346 | 16477158 | ID=Msa0010910-mRNA-1:cds;Parent=Msa0010910-mRNA-1 |
| chr1_1 | CDS | 16475865 | 16476001 | 16475865 | ID=Msa0010910-mRNA-1:cds;Parent=Msa0010910-mRNA-1 |
| chr1_1 | CDS | 16475566 | 16475728 | 16475566 | ID=Msa0010910-mRNA-1:cds;Parent=Msa0010910-mRNA-1 |
| chr1_1 | three_prime_UTR | 16475279 | 16475565 | 16475279 | ID=Msa0010910-mRNA-1:three_prime_utr;Parent=Msa0010910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
