Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1089960 | XP_003604146.2 | 98.952 | 763 | 8 | 0 | 3 | 765 | 2 | 764 | 0.0 | 1546 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1089960 | sp|Q9LTB0|EX84B_ARATH | 75.132 | 760 | 179 | 6 | 6 | 764 | 1 | 751 | 0.0 | 1082 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1089960 | G7JVK6 | 98.952 | 763 | 8 | 0 | 3 | 765 | 2 | 764 | 0.0 | 1546 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010910 | Msa1089960 | 0.997887 | 2.651957e-251 | -8.615850e-47 |
| Msa0028340 | Msa1089960 | 0.803706 | 3.067083e-49 | -8.615850e-47 |
| Msa0047640 | Msa1089960 | 0.827418 | 1.581927e-54 | -8.615850e-47 |
| Msa0052440 | Msa1089960 | 0.832369 | 9.833479e-56 | -8.615850e-47 |
| Msa0077460 | Msa1089960 | 0.801248 | 9.849555e-49 | -8.615850e-47 |
| Msa0089980 | Msa1089960 | 0.832099 | 1.146563e-55 | -8.615850e-47 |
| Msa0090010 | Msa1089960 | 0.830487 | 2.856513e-55 | -8.615850e-47 |
| Msa0106620 | Msa1089960 | 0.836082 | 1.152747e-56 | -8.615850e-47 |
| Msa0106710 | Msa1089960 | 0.815110 | 1.093164e-51 | -8.615850e-47 |
| Msa0606080 | Msa1089960 | 0.807766 | 4.305330e-50 | -8.615850e-47 |
| Msa0608270 | Msa1089960 | 0.825903 | 3.636962e-54 | -8.615850e-47 |
| Msa0611220 | Msa1089960 | 0.812346 | 4.440398e-51 | -8.615850e-47 |
| Msa0626270 | Msa1089960 | 0.825003 | 5.938469e-54 | -8.615850e-47 |
| Msa0626460 | Msa1089960 | 0.844892 | 5.706220e-59 | -8.615850e-47 |
| Msa0647030 | Msa1089960 | 0.811790 | 5.870597e-51 | -8.615850e-47 |
| Msa0648830 | Msa1089960 | 0.827575 | 1.450162e-54 | -8.615850e-47 |
| Msa0651560 | Msa1089960 | 0.834097 | 3.650049e-56 | -8.615850e-47 |
| Msa0664540 | Msa1089960 | 0.847443 | 1.152581e-59 | -8.615850e-47 |
| Msa0693880 | Msa1089960 | 0.808537 | 2.949486e-50 | -8.615850e-47 |
| Msa0697680 | Msa1089960 | 0.807644 | 4.569625e-50 | -8.615850e-47 |
| Msa0698100 | Msa1089960 | 0.815124 | 1.085448e-51 | -8.615850e-47 |
| Msa0702720 | Msa1089960 | 0.819024 | 1.443272e-52 | -8.615850e-47 |
| Msa0703800 | Msa1089960 | 0.807941 | 3.951378e-50 | -8.615850e-47 |
| Msa0709120 | Msa1089960 | 0.810584 | 1.071937e-50 | -8.615850e-47 |
| Msa0789560 | Msa1089960 | 0.827612 | 1.421434e-54 | -8.615850e-47 |
| Msa0790410 | Msa1089960 | 0.812032 | 5.198043e-51 | -8.615850e-47 |
| Msa0791090 | Msa1089960 | 0.803963 | 2.712425e-49 | -8.615850e-47 |
| Msa0124320 | Msa1089960 | 0.802382 | 5.760058e-49 | -8.615850e-47 |
| Msa0139670 | Msa1089960 | 0.809546 | 1.793634e-50 | -8.615850e-47 |
| Msa0140880 | Msa1089960 | 0.811394 | 7.157358e-51 | -8.615850e-47 |
| Msa0168570 | Msa1089960 | 0.806870 | 6.668094e-50 | -8.615850e-47 |
| Msa0177320 | Msa1089960 | 0.803396 | 3.556115e-49 | -8.615850e-47 |
| Msa0192640 | Msa1089960 | 0.800622 | 1.321754e-48 | -8.615850e-47 |
| Msa0227330 | Msa1089960 | 0.801483 | 8.814232e-49 | -8.615850e-47 |
| Msa0369420 | Msa1089960 | 0.812146 | 4.910495e-51 | -8.615850e-47 |
| Msa0376420 | Msa1089960 | 0.822105 | 2.829415e-53 | -8.615850e-47 |
| Msa0381360 | Msa1089960 | 0.821478 | 3.953332e-53 | -8.615850e-47 |
| Msa0382370 | Msa1089960 | 0.814255 | 1.690742e-51 | -8.615850e-47 |
| Msa0395980 | Msa1089960 | 0.845307 | 4.406113e-59 | -8.615850e-47 |
| Msa0402190 | Msa1089960 | 0.802394 | 5.729172e-49 | -8.615850e-47 |
| Msa0422530 | Msa1089960 | 0.803019 | 4.257079e-49 | -8.615850e-47 |
| Msa0423030 | Msa1089960 | 0.805568 | 1.253922e-49 | -8.615850e-47 |
| Msa0428210 | Msa1089960 | 0.806697 | 7.252051e-50 | -8.615850e-47 |
| Msa0432160 | Msa1089960 | 0.812595 | 3.916746e-51 | -8.615850e-47 |
| Msa0436060 | Msa1089960 | 0.803285 | 3.749141e-49 | -8.615850e-47 |
| Msa0438020 | Msa1089960 | 0.828679 | 7.864021e-55 | -8.615850e-47 |
| Msa0440510 | Msa1089960 | 0.844127 | 9.163044e-59 | -8.615850e-47 |
| Msa0476680 | Msa1089960 | 0.816243 | 6.115215e-52 | -8.615850e-47 |
| Msa0985180 | Msa1089960 | 0.812717 | 3.682968e-51 | -8.615850e-47 |
| Msa0985220 | Msa1089960 | 0.838500 | 2.771971e-57 | -8.615850e-47 |
| Msa0995370 | Msa1089960 | 0.819850 | 9.353347e-53 | -8.615850e-47 |
| Msa1007290 | Msa1089960 | 0.804498 | 2.098554e-49 | -8.615850e-47 |
| Msa1089960 | Msa1095790 | 0.805843 | 1.097373e-49 | -8.615850e-47 |
| Msa1089960 | Msa1131090 | 0.812294 | 4.557181e-51 | -8.615850e-47 |
| Msa1089960 | Msa1133590 | 0.804512 | 2.084641e-49 | -8.615850e-47 |
| Msa1089960 | Msa1136960 | 0.866987 | 1.906272e-65 | -8.615850e-47 |
| Msa1089960 | Msa1161480 | 0.839257 | 1.765809e-57 | -8.615850e-47 |
| Msa1089960 | Msa1208990 | 0.802079 | 6.651129e-49 | -8.615850e-47 |
| Msa1089960 | Msa1234620 | 0.809909 | 1.498825e-50 | -8.615850e-47 |
| Msa1089960 | Msa1236440 | 0.806720 | 7.172535e-50 | -8.615850e-47 |
| Msa1089960 | Msa1254620 | 0.819440 | 1.159889e-52 | -8.615850e-47 |
| Msa1089960 | Msa1260680 | 0.802118 | 6.529292e-49 | -8.615850e-47 |
| Msa1089960 | Msa1298100 | 0.826934 | 2.065271e-54 | -8.615850e-47 |
| Msa1089960 | Msa1299910 | 0.807526 | 4.841879e-50 | -8.615850e-47 |
| Msa1089960 | Msa1327870 | 0.810966 | 8.863664e-51 | -8.615850e-47 |
| Msa1089960 | Msa1339150 | 0.823998 | 1.024146e-53 | -8.615850e-47 |
| Msa1089960 | Msa1340200 | 0.831355 | 1.749437e-55 | -8.615850e-47 |
| Msa1089960 | Msa1341840 | 0.804522 | 2.074580e-49 | -8.615850e-47 |
| Msa1089960 | Msa1350700 | 0.825076 | 5.707746e-54 | -8.615850e-47 |
| Msa1089960 | Msa1360260 | 0.840215 | 9.945762e-58 | -8.615850e-47 |
| Msa1089960 | Msa1366550 | 0.847645 | 1.014540e-59 | -8.615850e-47 |
| Msa1089960 | Msa1391720 | 0.803913 | 2.778614e-49 | -8.615850e-47 |
| Msa1089960 | Msa1392210 | 0.805935 | 1.049610e-49 | -8.615850e-47 |
| Msa1089960 | Msa1393820 | 0.830516 | 2.810280e-55 | -8.615850e-47 |
| Msa1089960 | Msa1411000 | 0.841627 | 4.236745e-58 | -8.615850e-47 |
| Msa1089960 | Msa1411980 | 0.818551 | 1.847583e-52 | -8.615850e-47 |
| Msa1089960 | Msa1414500 | 0.965585 | 8.513171e-125 | -8.615850e-47 |
| Msa1089960 | Msa1429580 | 0.805243 | 1.466836e-49 | -8.615850e-47 |
| Msa1089960 | Msa1440900 | 0.804935 | 1.700899e-49 | -8.615850e-47 |
| Msa1089960 | Msa1443310 | 0.814801 | 1.280604e-51 | -8.615850e-47 |
| Msa1089960 | Msa1461370 | 0.830868 | 2.305044e-55 | -8.615850e-47 |
| Msa1089960 | Msa1463030 | 0.849866 | 2.455198e-60 | -8.615850e-47 |
| Msa1089960 | Msa1464090 | 0.825203 | 5.328414e-54 | -8.615850e-47 |
| Msa0244970 | Msa1089960 | 0.812816 | 3.505028e-51 | -8.615850e-47 |
| Msa0249310 | Msa1089960 | 0.824277 | 8.807747e-54 | -8.615850e-47 |
| Msa0249360 | Msa1089960 | 0.827100 | 1.884924e-54 | -8.615850e-47 |
| Msa0266220 | Msa1089960 | 0.833137 | 6.338106e-56 | -8.615850e-47 |
| Msa0287680 | Msa1089960 | 0.841462 | 4.683424e-58 | -8.615850e-47 |
| Msa0287790 | Msa1089960 | 0.809511 | 1.825183e-50 | -8.615850e-47 |
| Msa0287850 | Msa1089960 | 0.807245 | 5.553695e-50 | -8.615850e-47 |
| Msa0333610 | Msa1089960 | 0.830740 | 2.476625e-55 | -8.615850e-47 |
| Msa0335360 | Msa1089960 | 0.805986 | 1.024204e-49 | -8.615850e-47 |
| Msa0362890 | Msa1089960 | 0.853059 | 3.068393e-61 | -8.615850e-47 |
| Msa0491000 | Msa1089960 | 0.842816 | 2.052264e-58 | -8.615850e-47 |
| Msa0516240 | Msa1089960 | 0.817165 | 3.799363e-52 | -8.615850e-47 |
| Msa0519150 | Msa1089960 | 0.824428 | 8.115719e-54 | -8.615850e-47 |
| Msa0520270 | Msa1089960 | 0.801420 | 9.080026e-49 | -8.615850e-47 |
| Msa0521010 | Msa1089960 | 0.816029 | 6.827313e-52 | -8.615850e-47 |
| Msa0529670 | Msa1089960 | 0.962202 | 1.344873e-120 | -8.615850e-47 |
| Msa0534980 | Msa1089960 | 0.842632 | 2.296631e-58 | -8.615850e-47 |
| Msa0544170 | Msa1089960 | 0.815976 | 7.015506e-52 | -8.615850e-47 |
| Msa0544730 | Msa1089960 | 0.831633 | 1.494257e-55 | -8.615850e-47 |
| Msa0572750 | Msa1089960 | 0.850000 | 2.252903e-60 | -8.615850e-47 |
| Msa0586450 | Msa1089960 | 0.814983 | 1.166592e-51 | -8.615850e-47 |
| Msa0597770 | Msa1089960 | 0.819734 | 9.942459e-53 | -8.615850e-47 |
| Msa0855870 | Msa1089960 | 0.800209 | 1.604849e-48 | -8.615850e-47 |
| Msa0907850 | Msa1089960 | 0.805222 | 1.481332e-49 | -8.615850e-47 |
| Msa0933760 | Msa1089960 | 0.830869 | 2.302939e-55 | -8.615850e-47 |
| Msa0934140 | Msa1089960 | 0.806661 | 7.381920e-50 | -8.615850e-47 |
| Msa0959520 | Msa1089960 | 0.825279 | 5.110837e-54 | -8.615850e-47 |
| Msa0971650 | Msa1089960 | 0.821985 | 3.017152e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1089960 | MtrunA17_Chr4g0000541 | 98.952 | 763 | 8 | 0 | 3 | 765 | 2 | 764 | 0.0 | 1546 |
| Msa1089960 | MtrunA17_Chr6g0471001 | 57.278 | 742 | 292 | 11 | 25 | 753 | 31 | 760 | 0.0 | 826 |
| Msa1089960 | MtrunA17_Chr1g0210011 | 57.617 | 663 | 254 | 10 | 88 | 732 | 4 | 657 | 0.0 | 695 |
| Msa1089960 | MtrunA17_Chr4g0043561 | 35.396 | 695 | 425 | 10 | 50 | 731 | 28 | 711 | 2.39e-128 | 400 |
| Msa1089960 | MtrunA17_Chr1g0183451 | 25.470 | 691 | 476 | 14 | 50 | 731 | 61 | 721 | 1.84e-62 | 225 |
| Msa1089960 | MtrunA17_Chr1g0210001 | 59.701 | 67 | 26 | 1 | 22 | 87 | 24 | 90 | 5.44e-18 | 79.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1089960 | AT5G49830.1 | 75.132 | 760 | 179 | 6 | 6 | 764 | 1 | 751 | 0.0 | 1082 |
| Msa1089960 | AT5G49830.3 | 72.314 | 791 | 178 | 7 | 6 | 764 | 1 | 782 | 0.0 | 1066 |
| Msa1089960 | AT5G49830.2 | 75.978 | 716 | 164 | 5 | 50 | 764 | 105 | 813 | 0.0 | 1030 |
| Msa1089960 | AT1G10385.1 | 61.404 | 741 | 275 | 8 | 22 | 758 | 20 | 753 | 0.0 | 882 |
| Msa1089960 | AT1G10180.1 | 35.423 | 686 | 426 | 8 | 50 | 731 | 28 | 700 | 9.05e-128 | 399 |
Find 173 sgRNAs with CRISPR-Local
Find 555 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAGAAAGCTTTGAGGATTC+TGG | 0.189121 | 7_3:-3569939 | Msa1089960:CDS |
| AACAGAAGCATTTGCTCTTC+TGG | 0.230386 | 7_3:-3570935 | Msa1089960:CDS |
| AGTTGAGTTTCCTGATCTTT+TGG | 0.240158 | 7_3:-3571421 | Msa1089960:CDS |
| AAACATATCTGCTGCTATAT+TGG | 0.247414 | 7_3:+3568382 | None:intergenic |
| CTCTCCCCGTTTATTTCCTT+TGG | 0.259208 | 7_3:+3566725 | None:intergenic |
| CCTTACAGGAATCTTGGTTT+AGG | 0.259751 | 7_3:+3569805 | None:intergenic |
| TCTTCTTCGTCCATTGATTC+TGG | 0.265720 | 7_3:+3569957 | None:intergenic |
| TTTCAGAAGATCAGAGCTTT+TGG | 0.266073 | 7_3:-3568295 | Msa1089960:CDS |
| TCTACGGTTATCATCCTTAC+AGG | 0.270886 | 7_3:+3569791 | None:intergenic |
| ATTGGACTGTACTAATTTAC+AGG | 0.283078 | 7_3:+3566615 | None:intergenic |
| CTCCTCCATTCCCGTTGTTC+AGG | 0.299705 | 7_3:+3569741 | None:intergenic |
| CTTACAGGAATCTTGGTTTA+GGG | 0.300947 | 7_3:+3569806 | None:intergenic |
| TGCCCATCGCTTCAATTTGA+TGG | 0.308622 | 7_3:-3570614 | Msa1089960:CDS |
| CAACATTGAATGAATTGAAT+TGG | 0.310488 | 7_3:+3575518 | None:intergenic |
| TCGCTTCAATTTGATGGTTC+AGG | 0.316321 | 7_3:-3570608 | Msa1089960:intron |
| CTATGGCTGCTGCTGATGAT+TGG | 0.319105 | 7_3:-3570711 | Msa1089960:CDS |
| GCTAGCTAATGCCTCATTAC+TGG | 0.329413 | 7_3:-3569868 | Msa1089960:CDS |
| TCTCCTTCGTGATCTTGTTA+TGG | 0.329633 | 7_3:-3575423 | Msa1089960:exon |
| GAGGAAGGGCCAAGGCCTTT+AGG | 0.330967 | 7_3:-3568263 | Msa1089960:CDS |
| CCAATCTATCATGAAATTAC+TGG | 0.335302 | 7_3:-3566597 | Msa1089960:three_prime_UTR |
| TCATTAAACCATTCATCTTC+AGG | 0.346274 | 7_3:+3566785 | None:intergenic |
| GCGGCGAGTGTTAAAGAAAA+TGG | 0.352110 | 7_3:-3575356 | Msa1089960:CDS |
| GTTTAGGGAGGAGAGCTTCA+TGG | 0.358778 | 7_3:+3569821 | None:intergenic |
| ATTACCGTCACCGCTTGGTT+AGG | 0.363001 | 7_3:-3575631 | None:intergenic |
| AGCTGACATGTATATAAGTA+TGG | 0.372642 | 7_3:-3569622 | Msa1089960:CDS |
| TAGCTAGCAGTGCAATCTGC+TGG | 0.380139 | 7_3:+3569883 | None:intergenic |
| TATCATCCTTACAGGAATCT+TGG | 0.382644 | 7_3:+3569799 | None:intergenic |
| AATTGCAAAACATACCTATA+CGG | 0.393334 | 7_3:+3566936 | None:intergenic |
| GAATTGTGAATGAAATTATC+AGG | 0.397966 | 7_3:-3566995 | Msa1089960:CDS |
| CCAGTAATTTCATGATAGAT+TGG | 0.398861 | 7_3:+3566597 | None:intergenic |
| CGGCCGTCAAACACCTCATA+TGG | 0.413368 | 7_3:-3571087 | Msa1089960:CDS |
| TACTGCAGCTCTAGCACAAC+TGG | 0.415141 | 7_3:-3571055 | Msa1089960:CDS |
| TATGGCTGCTGCTGATGATT+GGG | 0.419906 | 7_3:-3570710 | Msa1089960:CDS |
| TGTTCAATTTCTAGCTAGAT+TGG | 0.419969 | 7_3:-3575494 | Msa1089960:five_prime_UTR |
| AGGTTGCTTGAGTGGATAGT+AGG | 0.422298 | 7_3:+3571568 | None:intergenic |
| ATGTTAATTAACGCAATAAT+CGG | 0.422821 | 7_3:+3566574 | None:intergenic |
| CCAAGGCCTTTAGGTCCTCT+TGG | 0.424024 | 7_3:-3568254 | Msa1089960:CDS |
| GGAAAACCAAAGGAAATAAA+CGG | 0.424170 | 7_3:-3566731 | Msa1089960:CDS |
| AGTTCAGATCCACGGGTAGA+AGG | 0.425091 | 7_3:+3571216 | None:intergenic |
| AATCTGCTGGGCTTCAGTTT+CGG | 0.426706 | 7_3:+3569896 | None:intergenic |
| TGAAAGCTCACCTTCTAAAT+CGG | 0.432039 | 7_3:+3571602 | None:intergenic |
| GAAAACCAAAGGAAATAAAC+GGG | 0.435327 | 7_3:-3566730 | Msa1089960:CDS |
| GCTTATACAGGACTTCTTTG+AGG | 0.435586 | 7_3:-3570078 | Msa1089960:intron |
| AGCAACCTTGATACATGGTT+TGG | 0.436211 | 7_3:-3571553 | Msa1089960:CDS |
| CATATCCTCCTAATGCTAAT+CGG | 0.438507 | 7_3:-3570681 | Msa1089960:CDS |
| GCCTTTCTGTGGTTCTTCTA+CGG | 0.438652 | 7_3:+3569775 | None:intergenic |
| CATTTGCTCTTCTGGTGAAA+AGG | 0.441118 | 7_3:-3570927 | Msa1089960:CDS |
| CCGGTCTGCCGATTAGCATT+AGG | 0.441791 | 7_3:+3570673 | None:intergenic |
| AAATCGTCATCCTGAACAAC+GGG | 0.443953 | 7_3:-3569751 | Msa1089960:CDS |
| TTACCGTCACCGCTTGGTTA+GGG | 0.446964 | 7_3:-3575630 | None:intergenic |
| TCACGCGCACTGTGTGTGTT+TGG | 0.451429 | 7_3:+3575568 | None:intergenic |
| AAGGAGATATCCGATTTAGA+AGG | 0.455997 | 7_3:-3571612 | Msa1089960:CDS |
| AGGTCCTCTTGGTCTACAAC+AGG | 0.457183 | 7_3:-3568243 | Msa1089960:intron |
| TGAAATATGTCAAGATGCTA+TGG | 0.457337 | 7_3:-3566765 | Msa1089960:CDS |
| GACTCGTGGGTTCAGTTGAC+AGG | 0.457851 | 7_3:-3569716 | Msa1089960:CDS |
| ACAAGCTGCAAGTGACTCAT+TGG | 0.462838 | 7_3:-3571016 | Msa1089960:CDS |
| CACCTCTTCTCTCAATGATA+AGG | 0.466166 | 7_3:-3575264 | Msa1089960:intron |
| CCAAGAGGACCTAAAGGCCT+TGG | 0.469828 | 7_3:+3568254 | None:intergenic |
| ATAGCAGCAGATATGTTTGT+AGG | 0.476239 | 7_3:-3568377 | Msa1089960:CDS |
| CAACAGGGATGGATCCGTAT+AGG | 0.477278 | 7_3:-3566950 | Msa1089960:intron |
| AAATATCAGACCTGGACAAA+TGG | 0.478669 | 7_3:-3571446 | Msa1089960:CDS |
| GATGCTATGGAAAGATTAAG+TGG | 0.486477 | 7_3:-3566752 | Msa1089960:CDS |
| AGCTAGCAGTGCAATCTGCT+GGG | 0.487168 | 7_3:+3569884 | None:intergenic |
| GCTTTGGCCGCTCTTGATGA+AGG | 0.487852 | 7_3:-3571366 | Msa1089960:CDS |
| CAAACGCAAGCCAAATTTGA+CGG | 0.488013 | 7_3:+3566431 | None:intergenic |
| AAAAGCACTACCAGAATCAA+TGG | 0.488194 | 7_3:-3569967 | Msa1089960:CDS |
| CCTCCATATGAGGTGTTTGA+CGG | 0.488508 | 7_3:+3571084 | None:intergenic |
| TTGATACATGGTTTGGCCGA+TGG | 0.489371 | 7_3:-3571546 | Msa1089960:CDS |
| ACCTCTGCTTAGTATGCAGT+TGG | 0.491714 | 7_3:-3570048 | Msa1089960:CDS |
| AGCAGATATGTTTGTAGGGA+GGG | 0.495602 | 7_3:-3568372 | Msa1089960:CDS |
| ACAAGAGAGTACTGCTGCTA+TGG | 0.495618 | 7_3:-3570728 | Msa1089960:CDS |
| TTCTAAATCGGATATCTCCT+TGG | 0.496112 | 7_3:+3571614 | None:intergenic |
| TGCAGAGACAGAAGTAAAGA+TGG | 0.497612 | 7_3:+3571300 | None:intergenic |
| AAGAGAACATCCAAAAGATC+AGG | 0.497714 | 7_3:+3571411 | None:intergenic |
| TTGGCTTCATCAGCAGCTGC+AGG | 0.498943 | 7_3:-3570898 | Msa1089960:CDS |
| GGACGAAGAAGAAAGCTTTG+AGG | 0.502847 | 7_3:-3569946 | Msa1089960:CDS |
| AAGGCGAGTAGAAGAAGCTT+TGG | 0.503692 | 7_3:-3571382 | Msa1089960:CDS |
| AGTATATGCTCCTCCATATG+AGG | 0.506025 | 7_3:+3571074 | None:intergenic |
| TGGATGTTCTCTTGGCTGAA+AGG | 0.507358 | 7_3:-3571401 | Msa1089960:CDS |
| GCAGTTGGGAGGACAAGCTC+TGG | 0.512635 | 7_3:-3570033 | Msa1089960:CDS |
| ATTATTGCGTTAATTAACAT+TGG | 0.513415 | 7_3:-3566571 | Msa1089960:three_prime_UTR |
| TTTCATAAAACTGAACAGAA+TGG | 0.516066 | 7_3:-3568405 | Msa1089960:CDS |
| GACACTTCTGCGCATCTCCT+CGG | 0.517265 | 7_3:+3573784 | None:intergenic |
| GTCATCCTGAACAACGGGAA+TGG | 0.517673 | 7_3:-3569746 | Msa1089960:CDS |
| TTGAAATGCTGTTGTACTAC+CGG | 0.521142 | 7_3:+3570654 | None:intergenic |
| GAAATGCGGATGAAGTTGAA+TGG | 0.522687 | 7_3:-3569596 | Msa1089960:CDS |
| CGATGATGAAGTCATCTTCA+CGG | 0.524587 | 7_3:-3575391 | Msa1089960:CDS |
| TTCATATTACCGTCACCGCT+TGG | 0.526712 | 7_3:-3575636 | None:intergenic |
| GAACCATCAAATTGAAGCGA+TGG | 0.527818 | 7_3:+3570611 | None:intergenic |
| AAACGCAAGCCAAATTTGAC+GGG | 0.528414 | 7_3:+3566432 | None:intergenic |
| GAGTGTGTTCAAATAGCATT+GGG | 0.528713 | 7_3:-3570856 | Msa1089960:CDS |
| TCTGGTGAAAAGGCATGCAT+TGG | 0.529675 | 7_3:-3570917 | Msa1089960:CDS |
| ATGTATCAAGGTTGCTTGAG+TGG | 0.531435 | 7_3:+3571560 | None:intergenic |
| CCTAAACCAAGATTCCTGTA+AGG | 0.532557 | 7_3:-3569805 | Msa1089960:CDS |
| TTCTTCTGAACTTGTGATGT+GGG | 0.533142 | 7_3:-3570968 | Msa1089960:CDS |
| CTAACTATGCAGCCTTCATA+CGG | 0.533378 | 7_3:-3573757 | Msa1089960:intron |
| TGACAAATACCGACCGTTGG+AGG | 0.534564 | 7_3:+3567031 | None:intergenic |
| CAGGACTTCTTTGAGGATGT+AGG | 0.541656 | 7_3:-3570071 | Msa1089960:CDS |
| ATTCTTCTGAACTTGTGATG+TGG | 0.543682 | 7_3:-3570969 | Msa1089960:CDS |
| TAGCAGCAGATATGTTTGTA+GGG | 0.544112 | 7_3:-3568376 | Msa1089960:CDS |
| ATCGGCCAAACCATGTATCA+AGG | 0.549441 | 7_3:+3571548 | None:intergenic |
| TCGTGATCTTGTTATGGCGG+CGG | 0.551537 | 7_3:-3575417 | Msa1089960:exon |
| AATGGAGTTAAGCTTGAAGA+AGG | 0.551779 | 7_3:-3575338 | Msa1089960:CDS |
| AGTATAACATGCAAAGTCTC+CGG | 0.553019 | 7_3:-3571107 | Msa1089960:CDS |
| ACTCAAGCAACCTTGATACA+TGG | 0.553619 | 7_3:-3571558 | Msa1089960:CDS |
| TAAATGTCATAGAACTTCCA+AGG | 0.554039 | 7_3:-3571631 | Msa1089960:intron |
| AGTGGATAGTAGGTTTCTGA+TGG | 0.555242 | 7_3:+3571578 | None:intergenic |
| AACACAAACTAACCGTATGA+AGG | 0.557025 | 7_3:+3573745 | None:intergenic |
| TTGGACTGTACTAATTTACA+GGG | 0.560286 | 7_3:+3566616 | None:intergenic |
| GACATGTATATAAGTATGGA+AGG | 0.560326 | 7_3:-3569618 | Msa1089960:CDS |
| ATCTTCACGGTCAAGAGCTA+CGG | 0.560822 | 7_3:-3575378 | Msa1089960:CDS |
| TGGAAACAAAATTGTACGAA+TGG | 0.565828 | 7_3:-3569919 | Msa1089960:CDS |
| CATATGAGGTGTTTGACGGC+CGG | 0.569334 | 7_3:+3571088 | None:intergenic |
| AACCATCAAATTGAAGCGAT+GGG | 0.570523 | 7_3:+3570612 | None:intergenic |
| GGAGTGTGTTCAAATAGCAT+TGG | 0.572465 | 7_3:-3570857 | Msa1089960:CDS |
| TGCACGAAGTTCAGATCCAC+GGG | 0.573946 | 7_3:+3571209 | None:intergenic |
| ATGATATTGAGGAAGGGCCA+AGG | 0.574464 | 7_3:-3568271 | Msa1089960:CDS |
| CCTAATGCTAATCGGCAGAC+CGG | 0.576241 | 7_3:-3570673 | Msa1089960:CDS |
| CTTATCATTGAGAGAAGAGG+TGG | 0.582451 | 7_3:+3575265 | None:intergenic |
| TTATCGATATCCGATTCTGA+TGG | 0.583099 | 7_3:-3571507 | Msa1089960:CDS |
| TGTAGACCAAGAGGACCTAA+AGG | 0.584749 | 7_3:+3568248 | None:intergenic |
| GAGAGCTTCATGGCTGCGCG+TGG | 0.585405 | 7_3:+3569831 | None:intergenic |
| TCTAATGCTTGTTCAACACT+AGG | 0.587244 | 7_3:+3570769 | None:intergenic |
| TTGGGAGGACAAGCTCTGGA+AGG | 0.588760 | 7_3:-3570029 | Msa1089960:CDS |
| CCTCTGCTTAGTATGCAGTT+GGG | 0.589651 | 7_3:-3570047 | Msa1089960:CDS |
| GTGCAGAGACAGATGCAGTA+GGG | 0.590473 | 7_3:+3566690 | None:intergenic |
| GCTTGTCAGCCTTCTACCCG+TGG | 0.590728 | 7_3:-3571225 | Msa1089960:CDS |
| TGTGAATGAAATTATCAGGA+AGG | 0.593693 | 7_3:-3566991 | Msa1089960:CDS |
| ACAGGAATCTTGGTTTAGGG+AGG | 0.595294 | 7_3:+3569809 | None:intergenic |
| TCAAATCTATCAGACTTGAA+AGG | 0.596208 | 7_3:+3575308 | None:intergenic |
| AAGATTAAGTGGAAAACCAA+AGG | 0.598349 | 7_3:-3566741 | Msa1089960:CDS |
| TTTGGGATGATATTGAGGAA+GGG | 0.600436 | 7_3:-3568277 | Msa1089960:CDS |
| TGGGAGGACAAGCTCTGGAA+GGG | 0.602271 | 7_3:-3570028 | Msa1089960:CDS |
| CCTTGACAAATACCGACCGT+TGG | 0.602728 | 7_3:+3567028 | None:intergenic |
| ACCGTAGAAGAACCACAGAA+AGG | 0.603747 | 7_3:-3569776 | Msa1089960:CDS |
| TGTGCAGAGACAGATGCAGT+AGG | 0.604544 | 7_3:+3566689 | None:intergenic |
| ATCCTGAACAACGGGAATGG+AGG | 0.608982 | 7_3:-3569743 | Msa1089960:CDS |
| TATAAGTATGGAAGGAAATG+CGG | 0.609812 | 7_3:-3569610 | Msa1089960:CDS |
| ATGCACGAAGTTCAGATCCA+CGG | 0.609989 | 7_3:+3571208 | None:intergenic |
| GTCTGCCGATTAGCATTAGG+AGG | 0.611723 | 7_3:+3570676 | None:intergenic |
| GTGATCTGCCTGAAGATGAA+TGG | 0.612166 | 7_3:-3566793 | Msa1089960:CDS |
| AAATCAGGCTCAAAGCATGT+TGG | 0.615504 | 7_3:+3569673 | None:intergenic |
| AACCTTATCATTGAGAGAAG+AGG | 0.615582 | 7_3:+3575262 | None:intergenic |
| GGAATGGAGGAGACGACTCG+TGG | 0.616377 | 7_3:-3569730 | Msa1089960:CDS |
| TAGTTCATCAGCCAGTAATG+AGG | 0.617154 | 7_3:+3569857 | None:intergenic |
| GCTTCATCAGCAGCTGCAGG+AGG | 0.617864 | 7_3:-3570895 | Msa1089960:CDS |
| GCAGAGACAGAAGTAAAGAT+GGG | 0.618767 | 7_3:+3571301 | None:intergenic |
| CAGCAGATATGTTTGTAGGG+AGG | 0.620591 | 7_3:-3568373 | Msa1089960:CDS |
| CTCTATGATCCCTAACCAAG+CGG | 0.621663 | 7_3:+3575621 | None:intergenic |
| ACTCAACTAACCATTTGTCC+AGG | 0.622338 | 7_3:+3571436 | None:intergenic |
| TGCTCATTATTAGAAGCTCG+TGG | 0.624438 | 7_3:-3570829 | Msa1089960:CDS |
| TGAATCGATGTGAACTCCAT+CGG | 0.624805 | 7_3:+3571530 | None:intergenic |
| CTTGAAAAGAGCTTCTGCCG+AGG | 0.627062 | 7_3:-3573801 | Msa1089960:CDS |
| CCAACGGTCGGTATTTGTCA+AGG | 0.628869 | 7_3:-3567028 | Msa1089960:CDS |
| TAGATTGGCGCGTGTGTGCG+TGG | 0.630527 | 7_3:-3575479 | Msa1089960:five_prime_UTR |
| CCTTCGTGATCTTGTTATGG+CGG | 0.635548 | 7_3:-3575420 | Msa1089960:exon |
| ACATAAAGAAATATCAGACC+TGG | 0.635904 | 7_3:-3571454 | Msa1089960:CDS |
| AGTAGCAAGCTGTGAGCATG+CGG | 0.636005 | 7_3:+3571153 | None:intergenic |
| CCGTCAAACACCTCATATGG+AGG | 0.647577 | 7_3:-3571084 | Msa1089960:CDS |
| CCCAACTGCATACTAAGCAG+AGG | 0.650328 | 7_3:+3570047 | None:intergenic |
| AAAATCGTCATCCTGAACAA+CGG | 0.651815 | 7_3:-3569752 | Msa1089960:CDS |
| AGGAGGTTTAAGAGCTGCTG+CGG | 0.658917 | 7_3:-3570878 | Msa1089960:CDS |
| CATACCTGTTGTAGACCAAG+AGG | 0.660216 | 7_3:+3568239 | None:intergenic |
| GAATGGAGGAGACGACTCGT+GGG | 0.664709 | 7_3:-3569729 | Msa1089960:CDS |
| ACGTTCTCCTTCATCAAGAG+CGG | 0.665530 | 7_3:+3571359 | None:intergenic |
| TTCACGGTCAAGAGCTACGG+CGG | 0.666183 | 7_3:-3575375 | Msa1089960:CDS |
| ACAAGTTCAGAAGAATACGC+TGG | 0.693012 | 7_3:+3570976 | None:intergenic |
| CTGCTTAGTATGCAGTTGGG+AGG | 0.693555 | 7_3:-3570044 | Msa1089960:CDS |
| GAATTGAATTGAAGAAGACA+CGG | 0.698389 | 7_3:+3575540 | None:intergenic |
| AAAATGAAAGGGGTGCCAAG+GGG | 0.724461 | 7_3:+3566516 | None:intergenic |
| CCGCCATAACAAGATCACGA+AGG | 0.740134 | 7_3:+3575420 | None:intergenic |
| AAAACCAAAGGAAATAAACG+GGG | 0.769107 | 7_3:-3566729 | Msa1089960:CDS |
| AGAATTCTATTACCGAACGT+AGG | 0.770772 | 7_3:-3571278 | Msa1089960:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATATATATATT+AGG | + | chr7_3:3572960-3572979 | None:intergenic | 0.0% |
| !!! | TTAATATAAATAATTTTAAA+TGG | + | chr7_3:3574435-3574454 | None:intergenic | 0.0% |
| !! | AAGCTTAATTATATATATTT+AGG | - | chr7_3:3566858-3566877 | Msa1089960:intron | 10.0% |
| !!! | TATTTTTCTCAAATTATTAT+CGG | - | chr7_3:3567382-3567401 | Msa1089960:intron | 10.0% |
| !!! | TCTTATTTATATATTATCAT+CGG | + | chr7_3:3568494-3568513 | None:intergenic | 10.0% |
| !!! | AATTCATTTTATTAAATTAG+GGG | + | chr7_3:3568597-3568616 | None:intergenic | 10.0% |
| !!! | CAATTCATTTTATTAAATTA+GGG | + | chr7_3:3568598-3568617 | None:intergenic | 10.0% |
| !!! | TCAATTCATTTTATTAAATT+AGG | + | chr7_3:3568599-3568618 | None:intergenic | 10.0% |
| !!! | AAAAAAAATCATTTTTGAAA+TGG | + | chr7_3:3568964-3568983 | None:intergenic | 10.0% |
| !! | TTAAGCTAAATAAATTAAAA+TGG | + | chr7_3:3570296-3570315 | None:intergenic | 10.0% |
| !! | TAAATATTATAACAAATACA+AGG | + | chr7_3:3574732-3574751 | None:intergenic | 10.0% |
| !! | AACGTTAAAAAAAAATTATA+TGG | + | chr7_3:3574897-3574916 | None:intergenic | 10.0% |
| !! | AATATATATAATTAAGCTTC+TGG | + | chr7_3:3566857-3566876 | None:intergenic | 15.0% |
| !! | TGTATGCTATATTATTTATA+GGG | + | chr7_3:3568533-3568552 | None:intergenic | 15.0% |
| !! | ATGTATGCTATATTATTTAT+AGG | + | chr7_3:3568534-3568553 | None:intergenic | 15.0% |
| !!! | TTTTGTTAATATATCTATCT+AGG | + | chr7_3:3568791-3568810 | None:intergenic | 15.0% |
| !! | TTAAATTGTAAGCAATTTAA+TGG | + | chr7_3:3569075-3569094 | None:intergenic | 15.0% |
| !!! | AAATTTTCAAAAGGAAATAT+TGG | + | chr7_3:3569438-3569457 | None:intergenic | 15.0% |
| !!! | TTTTGAAAATTTTCAGAATT+CGG | - | chr7_3:3569446-3569465 | Msa1089960:intron | 15.0% |
| !! | AATATTTATTTGATGAAATG+AGG | + | chr7_3:3570053-3570072 | None:intergenic | 15.0% |
| !!! | TGTTGATTTTTAAAAATTAC+AGG | - | chr7_3:3572702-3572721 | Msa1089960:intron | 15.0% |
| !!! | TTTTTAAAAATTACAGGATT+AGG | - | chr7_3:3572708-3572727 | Msa1089960:intron | 15.0% |
| !! | TCTACAATTAGAAATATATA+TGG | + | chr7_3:3572755-3572774 | None:intergenic | 15.0% |
| !! | ATATAATAAACCACAAAAAT+TGG | + | chr7_3:3572867-3572886 | None:intergenic | 15.0% |
| !! | TAAGTTATTAAGATATTCAA+AGG | + | chr7_3:3573414-3573433 | None:intergenic | 15.0% |
| !! | TTGAATATCTTAATAACTTA+TGG | - | chr7_3:3573414-3573433 | Msa1089960:intron | 15.0% |
| !!! | CAAATTGGATAATTTTATTT+GGG | - | chr7_3:3573870-3573889 | Msa1089960:intron | 15.0% |
| !! | TTATTAACATTAGCTATAAT+GGG | - | chr7_3:3574322-3574341 | Msa1089960:intron | 15.0% |
| !!! | TTTGTCTTTATTCATTTTAA+TGG | - | chr7_3:3575493-3575512 | Msa1089960:five_prime_UTR | 15.0% |
| !!! | TTGTCTTTATTCATTTTAAT+GGG | - | chr7_3:3575494-3575513 | Msa1089960:five_prime_UTR | 15.0% |
| !! | TATATATATTTAGGTCTGTT+TGG | - | chr7_3:3566867-3566886 | Msa1089960:intron | 20.0% |
| !! | TATTATCAGCTTATTTGATA+AGG | + | chr7_3:3567034-3567053 | None:intergenic | 20.0% |
| !! | TTATCAAATAAGCTGATAAT+AGG | - | chr7_3:3567033-3567052 | Msa1089960:CDS | 20.0% |
| !! | GAGAAAAATAACATAATTGA+AGG | + | chr7_3:3567372-3567391 | None:intergenic | 20.0% |
| !!! | CTTTACTAGTTTATAGTTTA+AGG | + | chr7_3:3568293-3568312 | None:intergenic | 20.0% |
| !! | ATACAATAATTTAACACAGA+TGG | - | chr7_3:3568624-3568643 | Msa1089960:intron | 20.0% |
| !! | TACAATAATTTAACACAGAT+GGG | - | chr7_3:3568625-3568644 | Msa1089960:intron | 20.0% |
| !!! | GATATTTTAGAACATATACT+AGG | - | chr7_3:3568728-3568747 | Msa1089960:intron | 20.0% |
| !! | CAAAAAATACTTGTATCATA+AGG | - | chr7_3:3568910-3568929 | Msa1089960:intron | 20.0% |
| !!! | GAATTCTGAAAATTTTCAAA+AGG | + | chr7_3:3569447-3569466 | None:intergenic | 20.0% |
| !! | AAGGATAAATAAAAAGAACA+AGG | + | chr7_3:3570207-3570226 | None:intergenic | 20.0% |
| !!! | GGTAACTGTTTTTTTTTTAA+TGG | + | chr7_3:3571533-3571552 | None:intergenic | 20.0% |
| !! | GACAAAATAAAAAGATGAAA+AGG | + | chr7_3:3571701-3571720 | None:intergenic | 20.0% |
| !!! | ATTTTCAATTTACTTTAAGC+TGG | - | chr7_3:3571876-3571895 | Msa1089960:intron | 20.0% |
| !!! | TTTTCAATTTACTTTAAGCT+GGG | - | chr7_3:3571877-3571896 | Msa1089960:intron | 20.0% |
| !!! | TTTTTGGAAATTTGTGAAAT+TGG | - | chr7_3:3572808-3572827 | Msa1089960:intron | 20.0% |
| !!! | ATTTGTGAAATTGGTAATTA+AGG | - | chr7_3:3572817-3572836 | Msa1089960:intron | 20.0% |
| !! | CAAAAGAAATATTACTCATT+GGG | - | chr7_3:3573030-3573049 | Msa1089960:intron | 20.0% |
| !! | TAAAACATAGTTAGCATTTA+TGG | + | chr7_3:3573357-3573376 | None:intergenic | 20.0% |
| !!! | AAACAATTTTCAGTTAGTTT+TGG | - | chr7_3:3573798-3573817 | Msa1089960:CDS | 20.0% |
| !!! | ATTATCCAATTTGCTTATAA+AGG | + | chr7_3:3573863-3573882 | None:intergenic | 20.0% |
| !!! | GCAAATTGGATAATTTTATT+TGG | - | chr7_3:3573869-3573888 | Msa1089960:intron | 20.0% |
| !! | AAGAACTCAAGTTTATTATT+GGG | + | chr7_3:3574124-3574143 | None:intergenic | 20.0% |
| !!! | CAATTACATGTTTTAATCAA+AGG | - | chr7_3:3574254-3574273 | Msa1089960:intron | 20.0% |
| !! | AGTATCAATTTAAGAAATCA+AGG | + | chr7_3:3574292-3574311 | None:intergenic | 20.0% |
| !! | CTTATTAACATTAGCTATAA+TGG | - | chr7_3:3574321-3574340 | Msa1089960:intron | 20.0% |
| !!! | ACAAATTTTCTTATAAGTTG+TGG | + | chr7_3:3574709-3574728 | None:intergenic | 20.0% |
| !! | ATGTTAATTAACGCAATAAT+CGG | + | chr7_3:3575417-3575436 | None:intergenic | 20.0% |
| !! | ATTATTGCGTTAATTAACAT+TGG | - | chr7_3:3575417-3575436 | Msa1089960:exon | 20.0% |
| !! | AATAAAGACAAAAATGAAAG+GGG | + | chr7_3:3575485-3575504 | None:intergenic | 20.0% |
| !! | GAATAAAGACAAAAATGAAA+GGG | + | chr7_3:3575486-3575505 | None:intergenic | 20.0% |
| !! | TGAATAAAGACAAAAATGAA+AGG | + | chr7_3:3575487-3575506 | None:intergenic | 20.0% |
| !!! | TGTCTTTATTCATTTTAATG+GGG | - | chr7_3:3575495-3575514 | Msa1089960:five_prime_UTR | 20.0% |
| ! | CAACATTGAATGAATTGAAT+TGG | + | chr7_3:3566473-3566492 | None:intergenic | 25.0% |
| ! | AAAATTGAAAAGCTGATGAA+TGG | + | chr7_3:3566797-3566816 | None:intergenic | 25.0% |
| ! | CGTTTAATATGCTTATGTAT+AGG | - | chr7_3:3566925-3566944 | Msa1089960:intron | 25.0% |
| ! | TGATAATAGGTTAGAAACAA+CGG | - | chr7_3:3567046-3567065 | Msa1089960:CDS | 25.0% |
| !! | TAACTTTTGTGAGACTATTT+GGG | + | chr7_3:3567213-3567232 | None:intergenic | 25.0% |
| !! | ATAACTTTTGTGAGACTATT+TGG | + | chr7_3:3567214-3567233 | None:intergenic | 25.0% |
| ! | CTCTTAAATTCTTCACTTAT+TGG | + | chr7_3:3567504-3567523 | None:intergenic | 25.0% |
| ! | GCATCACAATTGATATATAA+AGG | + | chr7_3:3567587-3567606 | None:intergenic | 25.0% |
| !!! | TCATGCATAGTTTTAAATTC+CGG | + | chr7_3:3567664-3567683 | None:intergenic | 25.0% |
| ! | AAAATTGTGACTAAAAGGAA+TGG | + | chr7_3:3567973-3567992 | None:intergenic | 25.0% |
| ! | GAAACAAAATTGTGACTAAA+AGG | + | chr7_3:3567978-3567997 | None:intergenic | 25.0% |
| ! | TAATGGTAAAACCTATTTGT+TGG | - | chr7_3:3568018-3568037 | Msa1089960:intron | 25.0% |
| ! | AATGGTAAAACCTATTTGTT+GGG | - | chr7_3:3568019-3568038 | Msa1089960:intron | 25.0% |
| ! | CTATAAACTAGTAAAGAAAG+TGG | - | chr7_3:3568297-3568316 | Msa1089960:CDS | 25.0% |
| ! | ATACTTGTATCATAAGGAAA+AGG | - | chr7_3:3568916-3568935 | Msa1089960:intron | 25.0% |
| ! | ACATTTGTAAAAAGTTCACA+AGG | + | chr7_3:3568989-3569008 | None:intergenic | 25.0% |
| !! | TGACATATTGTCGTTTATTA+GGG | + | chr7_3:3569019-3569038 | None:intergenic | 25.0% |
| ! | AATTGTAAGCAATTTAATGG+AGG | + | chr7_3:3569072-3569091 | None:intergenic | 25.0% |
| ! | TCCATCTATAAATCATCAAT+AGG | - | chr7_3:3569156-3569175 | Msa1089960:intron | 25.0% |
| ! | TCTGCATTTAAATTTCTGTA+TGG | - | chr7_3:3569767-3569786 | Msa1089960:CDS | 25.0% |
| ! | AAATTTCTGTATGGTAGATT+TGG | - | chr7_3:3569776-3569795 | Msa1089960:CDS | 25.0% |
| !!! | TCTTTGCTTAAGTATTTTGA+GGG | - | chr7_3:3569920-3569939 | Msa1089960:CDS | 25.0% |
| ! | GATGCTTCATAAATTCTAAA+AGG | - | chr7_3:3570007-3570026 | Msa1089960:CDS | 25.0% |
| ! | ATCAGTATATGATTTGACAA+AGG | - | chr7_3:3570075-3570094 | Msa1089960:intron | 25.0% |
| ! | TCAGTATATGATTTGACAAA+GGG | - | chr7_3:3570076-3570095 | Msa1089960:intron | 25.0% |
| !! | CTAAAAAGTTTCAAAAGTAC+AGG | + | chr7_3:3571198-3571217 | None:intergenic | 25.0% |
| ! | TTATGACATAGAATGATGTT+TGG | - | chr7_3:3571433-3571452 | Msa1089960:CDS | 25.0% |
| ! | TATGACATAGAATGATGTTT+GGG | - | chr7_3:3571434-3571453 | Msa1089960:CDS | 25.0% |
| ! | AAAATTCACATTGCAAATCA+AGG | + | chr7_3:3571554-3571573 | None:intergenic | 25.0% |
| ! | TAATTGTGTGAAAAAACAGA+TGG | - | chr7_3:3571598-3571617 | Msa1089960:CDS | 25.0% |
| ! | ATCATAGACTAATAGACTAA+AGG | + | chr7_3:3571655-3571674 | None:intergenic | 25.0% |
| !!! | CAGCTGCATTATTTTAATAT+TGG | - | chr7_3:3571798-3571817 | Msa1089960:intron | 25.0% |
| ! | AAAAACCACAAACTACATAA+GGG | + | chr7_3:3571855-3571874 | None:intergenic | 25.0% |
| ! | AAAAAACCACAAACTACATA+AGG | + | chr7_3:3571856-3571875 | None:intergenic | 25.0% |
| !!! | GGTATTTTTTATGCTTATAC+AGG | - | chr7_3:3571898-3571917 | Msa1089960:intron | 25.0% |
| ! | TATACCTGAAAAATCAAAGA+CGG | + | chr7_3:3572421-3572440 | None:intergenic | 25.0% |
| !!! | CTTTGATTTTTCAGGTATAA+TGG | - | chr7_3:3572422-3572441 | Msa1089960:intron | 25.0% |
| !! | AAGTGTTAAATTTAAAACCC+AGG | + | chr7_3:3572450-3572469 | None:intergenic | 25.0% |
| !! | AAATCTTCAAAACTGATTCA+TGG | + | chr7_3:3572473-3572492 | None:intergenic | 25.0% |
| !! | TATTTCTTTTGGTAGATGAA+TGG | + | chr7_3:3573021-3573040 | None:intergenic | 25.0% |
| !! | CCAATGAGTAATATTTCTTT+TGG | + | chr7_3:3573032-3573051 | None:intergenic | 25.0% |
| ! | CCAAAAGAAATATTACTCAT+TGG | - | chr7_3:3573029-3573048 | Msa1089960:intron | 25.0% |
| ! | CAATTTATTATTTCCTTCTG+TGG | + | chr7_3:3573075-3573094 | None:intergenic | 25.0% |
| !! | TTTTTGTTGAGTTTTACATG+CGG | - | chr7_3:3573158-3573177 | Msa1089960:intron | 25.0% |
| !! | TTAAACTCTGCATTTTATCA+AGG | + | chr7_3:3573225-3573244 | None:intergenic | 25.0% |
| !!! | ACAACTTTTTTACATCTTAG+TGG | - | chr7_3:3573276-3573295 | Msa1089960:intron | 25.0% |
| !!! | CAACTTTTTTACATCTTAGT+GGG | - | chr7_3:3573277-3573296 | Msa1089960:intron | 25.0% |
| ! | TAATAACTTATGGAACATGT+TGG | - | chr7_3:3573424-3573443 | Msa1089960:intron | 25.0% |
| ! | TTTCATAAAACTGAACAGAA+TGG | - | chr7_3:3573583-3573602 | Msa1089960:intron | 25.0% |
| !!! | TTACAGAAACTGTTATTTTG+TGG | - | chr7_3:3573669-3573688 | Msa1089960:intron | 25.0% |
| ! | ATGCAATTGAAATTTGATCA+TGG | - | chr7_3:3573769-3573788 | Msa1089960:CDS | 25.0% |
| ! | TGATTCCTTTATAAGCAAAT+TGG | - | chr7_3:3573855-3573874 | Msa1089960:intron | 25.0% |
| ! | TATTATTCTGTTTAAACCAC+TGG | + | chr7_3:3573966-3573985 | None:intergenic | 25.0% |
| ! | TATTTACATGCCTTAAACTT+TGG | + | chr7_3:3574068-3574087 | None:intergenic | 25.0% |
| ! | CAAGAACTCAAGTTTATTAT+TGG | + | chr7_3:3574125-3574144 | None:intergenic | 25.0% |
| ! | ATTAAAACATGTAATTGACG+AGG | + | chr7_3:3574251-3574270 | None:intergenic | 25.0% |
| ! | TCAATTTAAGAAATCAAGGA+TGG | + | chr7_3:3574288-3574307 | None:intergenic | 25.0% |
| ! | GAATTGTGAATGAAATTATC+AGG | - | chr7_3:3574993-3575012 | Msa1089960:intron | 25.0% |
| ! | AATTGCAAAACATACCTATA+CGG | + | chr7_3:3575055-3575074 | None:intergenic | 25.0% |
| !!! | GTCTTTATTCATTTTAATGG+GGG | - | chr7_3:3575496-3575515 | Msa1089960:five_prime_UTR | 25.0% |
| GAATTGAATTGAAGAAGACA+CGG | + | chr7_3:3566451-3566470 | None:intergenic | 30.0% | |
| !! | TGTTCAATTTCTAGCTAGAT+TGG | - | chr7_3:3566494-3566513 | Msa1089960:three_prime_UTR | 30.0% |
| TCAAATCTATCAGACTTGAA+AGG | + | chr7_3:3566683-3566702 | None:intergenic | 30.0% | |
| ACAAGAAACAATGGATCAAA+GGG | + | chr7_3:3566752-3566771 | None:intergenic | 30.0% | |
| AACAAGAAACAATGGATCAA+AGG | + | chr7_3:3566753-3566772 | None:intergenic | 30.0% | |
| GTAATCGAAACAAGAAACAA+TGG | + | chr7_3:3566761-3566780 | None:intergenic | 30.0% | |
| GATAATAGGTTAGAAACAAC+GGG | - | chr7_3:3567047-3567066 | Msa1089960:CDS | 30.0% | |
| ATAATAGGTTAGAAACAACG+GGG | - | chr7_3:3567048-3567067 | Msa1089960:CDS | 30.0% | |
| TTATACATGTGACACATGTT+TGG | + | chr7_3:3567265-3567284 | None:intergenic | 30.0% | |
| ! | ATACCAACATTTTCTATCGA+AGG | - | chr7_3:3567284-3567303 | Msa1089960:intron | 30.0% |
| AAATTCTTCACTTATTGGAG+TGG | + | chr7_3:3567499-3567518 | None:intergenic | 30.0% | |
| ATAGTTTCTTGTTGCTAACA+AGG | - | chr7_3:3567538-3567557 | Msa1089960:intron | 30.0% | |
| ATGAATAACATGATTGACAG+AGG | + | chr7_3:3567710-3567729 | None:intergenic | 30.0% | |
| !! | TTGTTTCTAGTTCGTATACT+TGG | - | chr7_3:3567748-3567767 | Msa1089960:intron | 30.0% |
| AACCATGTAGATCATAATAG+AGG | + | chr7_3:3567810-3567829 | None:intergenic | 30.0% | |
| TTATCTGCTATCTAGCATAA+AGG | + | chr7_3:3567842-3567861 | None:intergenic | 30.0% | |
| ! | ATAATCTAAGACTTGTGTTG+AGG | - | chr7_3:3567858-3567877 | Msa1089960:intron | 30.0% |
| TAGATACTTAGACGACTAAA+TGG | + | chr7_3:3568000-3568019 | None:intergenic | 30.0% | |
| TTAGTCGTCTAAGTATCTAA+TGG | - | chr7_3:3568001-3568020 | Msa1089960:intron | 30.0% | |
| ATAAGACATACCCAACAAAT+AGG | + | chr7_3:3568032-3568051 | None:intergenic | 30.0% | |
| CATAATTGCTTAATTTCCTG+GGG | + | chr7_3:3568152-3568171 | None:intergenic | 30.0% | |
| GCATAATTGCTTAATTTCCT+GGG | + | chr7_3:3568153-3568172 | None:intergenic | 30.0% | |
| TGCATAATTGCTTAATTTCC+TGG | + | chr7_3:3568154-3568173 | None:intergenic | 30.0% | |
| TGTTGTTGTATCAACTATCT+AGG | + | chr7_3:3568706-3568725 | None:intergenic | 30.0% | |
| ! | AGATAGTTGATACAACAACA+CGG | - | chr7_3:3568706-3568725 | Msa1089960:intron | 30.0% |
| ! | GACATATTGTCGTTTATTAG+GGG | + | chr7_3:3569018-3569037 | None:intergenic | 30.0% |
| ! | GTGACATATTGTCGTTTATT+AGG | + | chr7_3:3569020-3569039 | None:intergenic | 30.0% |
| ATTTAACGTCTAACACTAAC+TGG | - | chr7_3:3569089-3569108 | Msa1089960:intron | 30.0% | |
| ! | GCCTATTGATGATTTATAGA+TGG | + | chr7_3:3569160-3569179 | None:intergenic | 30.0% |
| ACTCTACCAATTCAAAAAGT+TGG | - | chr7_3:3569181-3569200 | Msa1089960:intron | 30.0% | |
| ! | TAGTGACCAACTTTTTGAAT+TGG | + | chr7_3:3569190-3569209 | None:intergenic | 30.0% |
| GTGCATGAAAAATTTGATGA+TGG | + | chr7_3:3569213-3569232 | None:intergenic | 30.0% | |
| ! | TGAAAATTTTCAGAATTCGG+TGG | - | chr7_3:3569449-3569468 | Msa1089960:intron | 30.0% |
| ! | TATCGATTGGTATTGTATAC+AGG | + | chr7_3:3569508-3569527 | None:intergenic | 30.0% |
| TAAATGCAGAAAAGCTTGAA+GGG | + | chr7_3:3569757-3569776 | None:intergenic | 30.0% | |
| TTAAATGCAGAAAAGCTTGA+AGG | + | chr7_3:3569758-3569777 | None:intergenic | 30.0% | |
| ACAAAACACCAATTGTCTAA+TGG | - | chr7_3:3569854-3569873 | Msa1089960:CDS | 30.0% | |
| CTCAAAATACTTAAGCAAAG+AGG | + | chr7_3:3569921-3569940 | None:intergenic | 30.0% | |
| ! | CTCTTTGCTTAAGTATTTTG+AGG | - | chr7_3:3569919-3569938 | Msa1089960:CDS | 30.0% |
| !! | AAATGTATGCGAAGAGTATT+TGG | + | chr7_3:3569977-3569996 | None:intergenic | 30.0% |
| GAGGATGAAGCTAAAATATT+AGG | + | chr7_3:3570034-3570053 | None:intergenic | 30.0% | |
| !! | ATCAGCTTTTTCTGTATAGA+AGG | + | chr7_3:3570226-3570245 | None:intergenic | 30.0% |
| TAAATGTCATAGAACTTCCA+AGG | - | chr7_3:3570357-3570376 | Msa1089960:intron | 30.0% | |
| TACAGAAAAACCATCAGAAT+CGG | + | chr7_3:3570494-3570513 | None:intergenic | 30.0% | |
| ! | TCTGATGGTTTTTCTGTAAA+TGG | - | chr7_3:3570496-3570515 | Msa1089960:intron | 30.0% |
| ! | TTTTTCTGTAAATGGTACAC+TGG | - | chr7_3:3570504-3570523 | Msa1089960:intron | 30.0% |
| ACATAAAGAAATATCAGACC+TGG | - | chr7_3:3570534-3570553 | Msa1089960:intron | 30.0% | |
| TTTCAGCCCTTAAAAAACTT+GGG | - | chr7_3:3570806-3570825 | Msa1089960:CDS | 30.0% | |
| !! | TGAGTAGTTGTTCTAAAACT+AGG | - | chr7_3:3571493-3571512 | Msa1089960:CDS | 30.0% |
| ATAGACTAATAGACTAAAGG+TGG | + | chr7_3:3571652-3571671 | None:intergenic | 30.0% | |
| TGGAAACAAAATTGTACGAA+TGG | - | chr7_3:3572069-3572088 | Msa1089960:intron | 30.0% | |
| AGCTGACATGTATATAAGTA+TGG | - | chr7_3:3572366-3572385 | Msa1089960:intron | 30.0% | |
| GACATGTATATAAGTATGGA+AGG | - | chr7_3:3572370-3572389 | Msa1089960:intron | 30.0% | |
| TATAAGTATGGAAGGAAATG+CGG | - | chr7_3:3572378-3572397 | Msa1089960:intron | 30.0% | |
| ! | AATCTGATTCTGTAGTCTTA+TGG | - | chr7_3:3572678-3572697 | Msa1089960:intron | 30.0% |
| !!! | TCGAATGTTGGCTAATTTTT+TGG | - | chr7_3:3572792-3572811 | Msa1089960:intron | 30.0% |
| !! | GGATTCTGAGAATATTTTCT+TGG | - | chr7_3:3572838-3572857 | Msa1089960:intron | 30.0% |
| !! | TTCTTGGTAACCAATTTTTG+TGG | - | chr7_3:3572854-3572873 | Msa1089960:intron | 30.0% |
| GCAGAAAATTGAAACTCTTA+CGG | - | chr7_3:3572893-3572912 | Msa1089960:intron | 30.0% | |
| AAAAAAGTTGACGTGTAACT+AGG | + | chr7_3:3573108-3573127 | None:intergenic | 30.0% | |
| ! | TTTTGTTGAGTTTTACATGC+GGG | - | chr7_3:3573159-3573178 | Msa1089960:intron | 30.0% |
| !! | TATCTATCTCCTGGTTTTTA+TGG | - | chr7_3:3573187-3573206 | Msa1089960:intron | 30.0% |
| GTAAAAAAGTTGTCTACCTA+GGG | + | chr7_3:3573269-3573288 | None:intergenic | 30.0% | |
| TGTAAAAAAGTTGTCTACCT+AGG | + | chr7_3:3573270-3573289 | None:intergenic | 30.0% | |
| AGTTGAAGCATAAACAGAAA+CGG | + | chr7_3:3573518-3573537 | None:intergenic | 30.0% | |
| AGACTGTTATGTTATTATCC+AGG | - | chr7_3:3573556-3573575 | Msa1089960:intron | 30.0% | |
| AAACATATCTGCTGCTATAT+TGG | + | chr7_3:3573609-3573628 | None:intergenic | 30.0% | |
| ! | CCTTAAACTTTGGTTTAGTT+TGG | + | chr7_3:3574058-3574077 | None:intergenic | 30.0% |
| CCAAACTAAACCAAAGTTTA+AGG | - | chr7_3:3574055-3574074 | Msa1089960:intron | 30.0% | |
| TAAACAAGATGTTTCGAAGT+TGG | + | chr7_3:3574393-3574412 | None:intergenic | 30.0% | |
| GCATTTCACATGTATTTATC+TGG | + | chr7_3:3574481-3574500 | None:intergenic | 30.0% | |
| TAAATACATGTGAAATGCAC+AGG | - | chr7_3:3574483-3574502 | Msa1089960:intron | 30.0% | |
| ! | GTCAATCAATACTAACCTTT+TGG | - | chr7_3:3574594-3574613 | Msa1089960:intron | 30.0% |
| ! | AATACTAACCTTTTGGATTC+TGG | - | chr7_3:3574601-3574620 | Msa1089960:intron | 30.0% |
| !! | CTAAAGTGTTTTTGAAAGGA+CGG | + | chr7_3:3574627-3574646 | None:intergenic | 30.0% |
| GTCCTTTCAAAAACACTTTA+GGG | - | chr7_3:3574626-3574645 | Msa1089960:intron | 30.0% | |
| GGGCACATTTATTTACTTAT+TGG | - | chr7_3:3574646-3574665 | Msa1089960:intron | 30.0% | |
| !!! | TGTGGAGAATTTTCTGAAAT+GGG | + | chr7_3:3574691-3574710 | None:intergenic | 30.0% |
| !! | TTGTGGAGAATTTTCTGAAA+TGG | + | chr7_3:3574692-3574711 | None:intergenic | 30.0% |
| ! | ATTCTAAAGAGCAATACATG+CGG | + | chr7_3:3574779-3574798 | None:intergenic | 30.0% |
| !!! | TAACGTTGTGCAGTTTTATT+TGG | - | chr7_3:3574910-3574929 | Msa1089960:intron | 30.0% |
| TGTGAATGAAATTATCAGGA+AGG | - | chr7_3:3574997-3575016 | Msa1089960:intron | 30.0% | |
| AAATGCAGATAGAATGTTGA+TGG | + | chr7_3:3575097-3575116 | None:intergenic | 30.0% | |
| TCATTAAACCATTCATCTTC+AGG | + | chr7_3:3575206-3575225 | None:intergenic | 30.0% | |
| TGAAATATGTCAAGATGCTA+TGG | - | chr7_3:3575223-3575242 | Msa1089960:intron | 30.0% | |
| AAGATTAAGTGGAAAACCAA+AGG | - | chr7_3:3575247-3575266 | Msa1089960:intron | 30.0% | |
| GGAAAACCAAAGGAAATAAA+CGG | - | chr7_3:3575257-3575276 | Msa1089960:intron | 30.0% | |
| GAAAACCAAAGGAAATAAAC+GGG | - | chr7_3:3575258-3575277 | Msa1089960:intron | 30.0% | |
| AAAACCAAAGGAAATAAACG+GGG | - | chr7_3:3575259-3575278 | Msa1089960:intron | 30.0% | |
| TTGGACTGTACTAATTTACA+GGG | + | chr7_3:3575375-3575394 | None:intergenic | 30.0% | |
| ATTGGACTGTACTAATTTAC+AGG | + | chr7_3:3575376-3575395 | None:intergenic | 30.0% | |
| CCAGTAATTTCATGATAGAT+TGG | + | chr7_3:3575394-3575413 | None:intergenic | 30.0% | |
| CCAATCTATCATGAAATTAC+TGG | - | chr7_3:3575391-3575410 | Msa1089960:CDS | 30.0% | |
| !!! | ATTTTTTGTCCCGTCAAATT+TGG | - | chr7_3:3575547-3575566 | Msa1089960:five_prime_UTR | 30.0% |
| AATGGAGTTAAGCTTGAAGA+AGG | - | chr7_3:3566650-3566669 | Msa1089960:exon | 35.0% | |
| AACCTTATCATTGAGAGAAG+AGG | + | chr7_3:3566729-3566748 | None:intergenic | 35.0% | |
| ! | ATATGAAGCACCTAACATGT+TGG | + | chr7_3:3567410-3567429 | None:intergenic | 35.0% |
| !! | GCTAACAAGGTTCTAAATTG+TGG | - | chr7_3:3567551-3567570 | Msa1089960:intron | 35.0% |
| ! | GTTCTAAATTGTGGTTGCTA+TGG | - | chr7_3:3567560-3567579 | Msa1089960:intron | 35.0% |
| TTCGTATACTTGGTTGAACA+GGG | - | chr7_3:3567758-3567777 | Msa1089960:intron | 35.0% | |
| TGCCTCTATTATGATCTACA+TGG | - | chr7_3:3567805-3567824 | Msa1089960:intron | 35.0% | |
| ! | GAACATAGTGAAAGAGTACA+AGG | - | chr7_3:3567911-3567930 | Msa1089960:intron | 35.0% |
| GACTACATGGTTATCACAAT+TGG | + | chr7_3:3567942-3567961 | None:intergenic | 35.0% | |
| AATGGAAAATTGCGACTACA+TGG | + | chr7_3:3567955-3567974 | None:intergenic | 35.0% | |
| ! | TATGTCTTATTACACCATGC+AGG | - | chr7_3:3568042-3568061 | Msa1089960:intron | 35.0% |
| ! | ATGTCTTATTACACCATGCA+GGG | - | chr7_3:3568043-3568062 | Msa1089960:intron | 35.0% |
| AACACAAACTAACCGTATGA+AGG | + | chr7_3:3568246-3568265 | None:intergenic | 35.0% | |
| CTAGTAAAGAAAGTGGTTCA+AGG | - | chr7_3:3568304-3568323 | Msa1089960:CDS | 35.0% | |
| TTTGATCTTGTGAAGCAAAG+AGG | - | chr7_3:3568371-3568390 | Msa1089960:CDS | 35.0% | |
| !! | AAGCAAAGAGGTTGTTTTCA+AGG | - | chr7_3:3568383-3568402 | Msa1089960:CDS | 35.0% |
| ! | TTTTTGGATGGTGAGAATGA+GGG | + | chr7_3:3569127-3569146 | None:intergenic | 35.0% |
| !! | ATTTTTGGATGGTGAGAATG+AGG | + | chr7_3:3569128-3569147 | None:intergenic | 35.0% |
| ! | AGATGGAAGTTACGCATTTT+TGG | + | chr7_3:3569143-3569162 | None:intergenic | 35.0% |
| AAAAAGAAGACCCCAATTGT+GGG | + | chr7_3:3569250-3569269 | None:intergenic | 35.0% | |
| AAAAAAGAAGACCCCAATTG+TGG | + | chr7_3:3569251-3569270 | None:intergenic | 35.0% | |
| TATACGTTTGGATACTGCTT+TGG | + | chr7_3:3569413-3569432 | None:intergenic | 35.0% | |
| AAAGCAGTATCCAAACGTAT+AGG | - | chr7_3:3569412-3569431 | Msa1089960:intron | 35.0% | |
| ! | GAAATATTGGCCTATACGTT+TGG | + | chr7_3:3569425-3569444 | None:intergenic | 35.0% |
| ATACCAATCGATACCTGTAT+AGG | - | chr7_3:3569515-3569534 | Msa1089960:intron | 35.0% | |
| ACAAGTGCACATATTAGTGT+CGG | - | chr7_3:3569551-3569570 | Msa1089960:intron | 35.0% | |
| ! | ATTTTCACATTCGACGATGT+GGG | - | chr7_3:3569667-3569686 | Msa1089960:CDS | 35.0% |
| ! | ACCAGTTTCACATAGAGTTT+TGG | + | chr7_3:3569713-3569732 | None:intergenic | 35.0% |
| AAAACTCTATGTGAAACTGG+TGG | - | chr7_3:3569712-3569731 | Msa1089960:CDS | 35.0% | |
| !! | TATGCGAAGAGTATTTGGAT+TGG | + | chr7_3:3569972-3569991 | None:intergenic | 35.0% |
| TTCTAAATCGGATATCTCCT+TGG | + | chr7_3:3570377-3570396 | None:intergenic | 35.0% | |
| AAGGAGATATCCGATTTAGA+AGG | - | chr7_3:3570376-3570395 | Msa1089960:intron | 35.0% | |
| TGAAAGCTCACCTTCTAAAT+CGG | + | chr7_3:3570389-3570408 | None:intergenic | 35.0% | |
| TTATCGATATCCGATTCTGA+TGG | - | chr7_3:3570481-3570500 | Msa1089960:intron | 35.0% | |
| AAATATCAGACCTGGACAAA+TGG | - | chr7_3:3570542-3570561 | Msa1089960:intron | 35.0% | |
| ! | AGTTGAGTTTCCTGATCTTT+TGG | - | chr7_3:3570567-3570586 | Msa1089960:intron | 35.0% |
| AAGAGAACATCCAAAAGATC+AGG | + | chr7_3:3570580-3570599 | None:intergenic | 35.0% | |
| ! | TGATCTTTTGGATGTTCTCT+TGG | - | chr7_3:3570579-3570598 | Msa1089960:intron | 35.0% |
| AGAATTCTATTACCGAACGT+AGG | - | chr7_3:3570710-3570729 | Msa1089960:CDS | 35.0% | |
| ! | AGCTAATTTTTGCCTACGTT+CGG | + | chr7_3:3570725-3570744 | None:intergenic | 35.0% |
| GTTTCAGCCCTTAAAAAACT+TGG | - | chr7_3:3570805-3570824 | Msa1089960:CDS | 35.0% | |
| TTCAGCCCTTAAAAAACTTG+GGG | - | chr7_3:3570807-3570826 | Msa1089960:CDS | 35.0% | |
| !!! | ACCATCCCCAAGTTTTTTAA+GGG | + | chr7_3:3570815-3570834 | None:intergenic | 35.0% |
| AGTATAACATGCAAAGTCTC+CGG | - | chr7_3:3570881-3570900 | Msa1089960:CDS | 35.0% | |
| !! | AGTGACTCATTGGCTATTTT+TGG | - | chr7_3:3570982-3571001 | Msa1089960:CDS | 35.0% |
| ATTCTTCTGAACTTGTGATG+TGG | - | chr7_3:3571019-3571038 | Msa1089960:CDS | 35.0% | |
| TTCTTCTGAACTTGTGATGT+GGG | - | chr7_3:3571020-3571039 | Msa1089960:CDS | 35.0% | |
| GAGTGTGTTCAAATAGCATT+GGG | - | chr7_3:3571132-3571151 | Msa1089960:CDS | 35.0% | |
| TCTAATGCTTGTTCAACACT+AGG | + | chr7_3:3571222-3571241 | None:intergenic | 35.0% | |
| CATATCCTCCTAATGCTAAT+CGG | - | chr7_3:3571307-3571326 | Msa1089960:CDS | 35.0% | |
| TTGAAATGCTGTTGTACTAC+CGG | + | chr7_3:3571337-3571356 | None:intergenic | 35.0% | |
| AACCATCAAATTGAAGCGAT+GGG | + | chr7_3:3571379-3571398 | None:intergenic | 35.0% | |
| !!! | TCAGGTGAGACTTTTAGTTT+TGG | - | chr7_3:3571398-3571417 | Msa1089960:CDS | 35.0% |
| !! | AAAAGCACTACCAGAATCAA+TGG | - | chr7_3:3572021-3572040 | Msa1089960:intron | 35.0% |
| CTTACAGGAATCTTGGTTTA+GGG | + | chr7_3:3572185-3572204 | None:intergenic | 35.0% | |
| TATCATCCTTACAGGAATCT+TGG | + | chr7_3:3572192-3572211 | None:intergenic | 35.0% | |
| AAAATCGTCATCCTGAACAA+CGG | - | chr7_3:3572236-3572255 | Msa1089960:intron | 35.0% | |
| ! | TTTGAGCCTGATTTTTACAG+AGG | - | chr7_3:3572324-3572343 | Msa1089960:intron | 35.0% |
| !! | GATTCCGTCTTTGATTTTTC+AGG | - | chr7_3:3572414-3572433 | Msa1089960:intron | 35.0% |
| !!! | TTTTCAGGTATAATGGAACC+TGG | - | chr7_3:3572429-3572448 | Msa1089960:intron | 35.0% |
| ! | TTTCAGGTATAATGGAACCT+GGG | - | chr7_3:3572430-3572449 | Msa1089960:intron | 35.0% |
| TCGATGAAGAATGAACAAGA+AGG | + | chr7_3:3572509-3572528 | None:intergenic | 35.0% | |
| GATATGTGTAACGAGGAAAA+AGG | - | chr7_3:3572650-3572669 | Msa1089960:intron | 35.0% | |
| AAGACTACAGAATCAGATTC+TGG | + | chr7_3:3572677-3572696 | None:intergenic | 35.0% | |
| ! | TTTGTTGAGTTTTACATGCG+GGG | - | chr7_3:3573160-3573179 | Msa1089960:intron | 35.0% |
| TATTCCACTCCATAAAAACC+AGG | + | chr7_3:3573199-3573218 | None:intergenic | 35.0% | |
| !!! | TTTTACATCTTAGTGGGTTC+AGG | - | chr7_3:3573283-3573302 | Msa1089960:intron | 35.0% |
| !! | TCAGTTTTATGAAAAGCTCC+TGG | + | chr7_3:3573577-3573596 | None:intergenic | 35.0% |
| ATAGCAGCAGATATGTTTGT+AGG | - | chr7_3:3573611-3573630 | Msa1089960:intron | 35.0% | |
| TAGCAGCAGATATGTTTGTA+GGG | - | chr7_3:3573612-3573631 | Msa1089960:intron | 35.0% | |
| ! | TTTCAGAAGATCAGAGCTTT+TGG | - | chr7_3:3573693-3573712 | Msa1089960:intron | 35.0% |
| ! | TTCAGAAGATCAGAGCTTTT+GGG | - | chr7_3:3573694-3573713 | Msa1089960:intron | 35.0% |
| !!! | TTTTGGGATGATATTGAGGA+AGG | - | chr7_3:3573710-3573729 | Msa1089960:intron | 35.0% |
| ! | TTTGGGATGATATTGAGGAA+GGG | - | chr7_3:3573711-3573730 | Msa1089960:intron | 35.0% |
| CTGAAACACTGATACCTAAT+AGG | - | chr7_3:3573824-3573843 | Msa1089960:CDS | 35.0% | |
| GAATCAATTCGTGTCCTATT+AGG | + | chr7_3:3573841-3573860 | None:intergenic | 35.0% | |
| ! | TGTTTAAACCACTGGTTGTT+AGG | + | chr7_3:3573958-3573977 | None:intergenic | 35.0% |
| TTTGGATACTCTGCATTCTT+CGG | + | chr7_3:3574040-3574059 | None:intergenic | 35.0% | |
| AAGAAACTTAGCTGTGTATG+TGG | + | chr7_3:3574181-3574200 | None:intergenic | 35.0% | |
| TGTTCATTGTATCAAGCACA+TGG | - | chr7_3:3574563-3574582 | Msa1089960:intron | 35.0% | |
| CGTCCTTTCAAAAACACTTT+AGG | - | chr7_3:3574625-3574644 | Msa1089960:intron | 35.0% | |
| !! | TGCCCTAAAGTGTTTTTGAA+AGG | + | chr7_3:3574631-3574650 | None:intergenic | 35.0% |
| !!! | GAATTTTCTGAAATGGGTGT+TGG | + | chr7_3:3574685-3574704 | None:intergenic | 35.0% |
| AGTTTGCGTCTATTGATCTT+CGG | + | chr7_3:3574835-3574854 | None:intergenic | 35.0% | |
| !! | AGAATGTTGATGGTGAAACA+TGG | + | chr7_3:3575087-3575106 | None:intergenic | 35.0% |
| GCATTTGCAATTGTTTCCAT+TGG | - | chr7_3:3575111-3575130 | Msa1089960:intron | 35.0% | |
| ATTGTTTCCATTGGAAGTTG+TGG | - | chr7_3:3575120-3575139 | Msa1089960:intron | 35.0% | |
| GATGCTATGGAAAGATTAAG+TGG | - | chr7_3:3575236-3575255 | Msa1089960:intron | 35.0% | |
| TCTCCTTCGTGATCTTGTTA+TGG | - | chr7_3:3566565-3566584 | Msa1089960:three_prime_UTR | 40.0% | |
| CGATGATGAAGTCATCTTCA+CGG | - | chr7_3:3566597-3566616 | Msa1089960:three_prime_UTR | 40.0% | |
| CTTATCATTGAGAGAAGAGG+TGG | + | chr7_3:3566726-3566745 | None:intergenic | 40.0% | |
| CACCTCTTCTCTCAATGATA+AGG | - | chr7_3:3566724-3566743 | Msa1089960:CDS | 40.0% | |
| CATGTGACACATGTTTGGAT+TGG | + | chr7_3:3567260-3567279 | None:intergenic | 40.0% | |
| ACGCCTTCGATAGAAAATGT+TGG | + | chr7_3:3567290-3567309 | None:intergenic | 40.0% | |
| TGAAGGTAATCACGTGTGTT+GGG | + | chr7_3:3567355-3567374 | None:intergenic | 40.0% | |
| TTGAAGGTAATCACGTGTGT+TGG | + | chr7_3:3567356-3567375 | None:intergenic | 40.0% | |
| !! | ATTATCGGTGCCAACATGTT+AGG | - | chr7_3:3567397-3567416 | Msa1089960:intron | 40.0% |
| CAATTGCGACAACAAGATAC+AGG | + | chr7_3:3567631-3567650 | None:intergenic | 40.0% | |
| GGATATTAGCTGGTATCATC+TGG | + | chr7_3:3567689-3567708 | None:intergenic | 40.0% | |
| GATTGACAGAGGATATTAGC+TGG | + | chr7_3:3567699-3567718 | None:intergenic | 40.0% | |
| GTTCGTATACTTGGTTGAAC+AGG | - | chr7_3:3567757-3567776 | Msa1089960:intron | 40.0% | |
| !!! | CTTTTTTTCTCGTTTTCCCC+AGG | - | chr7_3:3568133-3568152 | Msa1089960:intron | 40.0% |
| CTAACTATGCAGCCTTCATA+CGG | - | chr7_3:3568231-3568250 | Msa1089960:intron | 40.0% | |
| GGTACAAACACATCTTTCTC+TGG | - | chr7_3:3568937-3568956 | Msa1089960:intron | 40.0% | |
| ! | TTTTGGATGGTGAGAATGAG+GGG | + | chr7_3:3569126-3569145 | None:intergenic | 40.0% |
| !! | GGAAGTTACGCATTTTTGGA+TGG | + | chr7_3:3569139-3569158 | None:intergenic | 40.0% |
| !! | CTTCCTATACAGGTATCGAT+TGG | + | chr7_3:3569521-3569540 | None:intergenic | 40.0% |
| GTGCAATACTCTTCCTATAC+AGG | + | chr7_3:3569531-3569550 | None:intergenic | 40.0% | |
| ! | GCACATATTAGTGTCGGATA+CGG | - | chr7_3:3569557-3569576 | Msa1089960:intron | 40.0% |
| ! | CACATATTAGTGTCGGATAC+GGG | - | chr7_3:3569558-3569577 | Msa1089960:intron | 40.0% |
| ! | GATTTTCACATTCGACGATG+TGG | - | chr7_3:3569666-3569685 | Msa1089960:CDS | 40.0% |
| ! | TTTTCACATTCGACGATGTG+GGG | - | chr7_3:3569668-3569687 | Msa1089960:CDS | 40.0% |
| !! | AGAGTTTTGGCAATACGAAG+TGG | + | chr7_3:3569700-3569719 | None:intergenic | 40.0% |
| GCCAAAACTCTATGTGAAAC+TGG | - | chr7_3:3569709-3569728 | Msa1089960:CDS | 40.0% | |
| TGGTGGCTACATAATTCCAT+TGG | - | chr7_3:3569729-3569748 | Msa1089960:CDS | 40.0% | |
| ! | TTGGATTTGCTCAAAGCATG+CGG | - | chr7_3:3569795-3569814 | Msa1089960:CDS | 40.0% |
| CCACTTTGCCATTAGACAAT+TGG | + | chr7_3:3569865-3569884 | None:intergenic | 40.0% | |
| CCAATTGTCTAATGGCAAAG+TGG | - | chr7_3:3569862-3569881 | Msa1089960:CDS | 40.0% | |
| ! | AGGAAGTACAATCCAGAACT+GGG | + | chr7_3:3569901-3569920 | None:intergenic | 40.0% |
| !! | TATTTTGAGGGTGCAGAAGA+GGG | - | chr7_3:3569932-3569951 | Msa1089960:CDS | 40.0% |
| GAGAATTATCTCCCTGTATG+TGG | - | chr7_3:3570138-3570157 | Msa1089960:intron | 40.0% | |
| CCAGATTTACACCACATACA+GGG | + | chr7_3:3570152-3570171 | None:intergenic | 40.0% | |
| CCTGTATGTGGTGTAAATCT+GGG | - | chr7_3:3570150-3570169 | Msa1089960:intron | 40.0% | |
| ATGTGGTGTAAATCTGGGTA+TGG | - | chr7_3:3570155-3570174 | Msa1089960:intron | 40.0% | |
| TAAATCTGGGTATGGCAGTT+GGG | - | chr7_3:3570163-3570182 | Msa1089960:intron | 40.0% | |
| AGTGGATAGTAGGTTTCTGA+TGG | + | chr7_3:3570413-3570432 | None:intergenic | 40.0% | |
| ATGTATCAAGGTTGCTTGAG+TGG | + | chr7_3:3570431-3570450 | None:intergenic | 40.0% | |
| ACTCAAGCAACCTTGATACA+TGG | - | chr7_3:3570430-3570449 | Msa1089960:intron | 40.0% | |
| AGCAACCTTGATACATGGTT+TGG | - | chr7_3:3570435-3570454 | Msa1089960:intron | 40.0% | |
| TGAATCGATGTGAACTCCAT+CGG | + | chr7_3:3570461-3570480 | None:intergenic | 40.0% | |
| ACTCAACTAACCATTTGTCC+AGG | + | chr7_3:3570555-3570574 | None:intergenic | 40.0% | |
| GCAGAGACAGAAGTAAAGAT+GGG | + | chr7_3:3570690-3570709 | None:intergenic | 40.0% | |
| TGCAGAGACAGAAGTAAAGA+TGG | + | chr7_3:3570691-3570710 | None:intergenic | 40.0% | |
| !!! | GACCATCCCCAAGTTTTTTA+AGG | + | chr7_3:3570816-3570835 | None:intergenic | 40.0% |
| AGTATATGCTCCTCCATATG+AGG | + | chr7_3:3570917-3570936 | None:intergenic | 40.0% | |
| !!! | CTCATTGGCTATTTTTGGTG+AGG | - | chr7_3:3570987-3571006 | Msa1089960:CDS | 40.0% |
| ACAAGTTCAGAAGAATACGC+TGG | + | chr7_3:3571015-3571034 | None:intergenic | 40.0% | |
| GGAGTGTGTTCAAATAGCAT+TGG | - | chr7_3:3571131-3571150 | Msa1089960:CDS | 40.0% | |
| TGCTCATTATTAGAAGCTCG+TGG | - | chr7_3:3571159-3571178 | Msa1089960:CDS | 40.0% | |
| GAACCATCAAATTGAAGCGA+TGG | + | chr7_3:3571380-3571399 | None:intergenic | 40.0% | |
| ! | TCGCTTCAATTTGATGGTTC+AGG | - | chr7_3:3571380-3571399 | Msa1089960:CDS | 40.0% |
| AATAGTGATATAGCAGCCGT+TGG | - | chr7_3:3571463-3571482 | Msa1089960:CDS | 40.0% | |
| ATAGTGATATAGCAGCCGTT+GGG | - | chr7_3:3571464-3571483 | Msa1089960:CDS | 40.0% | |
| AACTACTCACATTGTCCCAA+CGG | + | chr7_3:3571482-3571501 | None:intergenic | 40.0% | |
| CAAACTACATAAGGGAAACG+TGG | + | chr7_3:3571847-3571866 | None:intergenic | 40.0% | |
| CGTTTCCCTTATGTAGTTTG+TGG | - | chr7_3:3571847-3571866 | Msa1089960:intron | 40.0% | |
| GCTTATACAGGACTTCTTTG+AGG | - | chr7_3:3571910-3571929 | Msa1089960:intron | 40.0% | |
| !! | TCTTCTTCGTCCATTGATTC+TGG | + | chr7_3:3572034-3572053 | None:intergenic | 40.0% |
| !! | GAAGAAAGCTTTGAGGATTC+TGG | - | chr7_3:3572049-3572068 | Msa1089960:intron | 40.0% |
| TAGTTCATCAGCCAGTAATG+AGG | + | chr7_3:3572134-3572153 | None:intergenic | 40.0% | |
| CCTTACAGGAATCTTGGTTT+AGG | + | chr7_3:3572186-3572205 | None:intergenic | 40.0% | |
| CCTAAACCAAGATTCCTGTA+AGG | - | chr7_3:3572183-3572202 | Msa1089960:intron | 40.0% | |
| TCTACGGTTATCATCCTTAC+AGG | + | chr7_3:3572200-3572219 | None:intergenic | 40.0% | |
| ! | ATGACGATTTTGCCTTTCTG+TGG | + | chr7_3:3572227-3572246 | None:intergenic | 40.0% |
| AAATCGTCATCCTGAACAAC+GGG | - | chr7_3:3572237-3572256 | Msa1089960:intron | 40.0% | |
| AAATCAGGCTCAAAGCATGT+TGG | + | chr7_3:3572318-3572337 | None:intergenic | 40.0% | |
| ! | AGCCTGATTTTTACAGAGGA+TGG | - | chr7_3:3572328-3572347 | Msa1089960:intron | 40.0% |
| CACCATCCTCTGTAAAAATC+AGG | + | chr7_3:3572333-3572352 | None:intergenic | 40.0% | |
| GAAATGCGGATGAAGTTGAA+TGG | - | chr7_3:3572392-3572411 | Msa1089960:intron | 40.0% | |
| ACACTTCTCATGCATAACAC+TGG | + | chr7_3:3572560-3572579 | None:intergenic | 40.0% | |
| ! | CCTGCTCTTTTCTTCTTGTT+GGG | - | chr7_3:3572612-3572631 | Msa1089960:intron | 40.0% |
| TTGTTGGGAACTTCTCTGTT+GGG | - | chr7_3:3572627-3572646 | Msa1089960:intron | 40.0% | |
| AACATTCGAAACTGTGGACA+AGG | + | chr7_3:3572781-3572800 | None:intergenic | 40.0% | |
| TTGTCCACAGTTTCGAATGT+TGG | - | chr7_3:3572780-3572799 | Msa1089960:intron | 40.0% | |
| TTAGCCAACATTCGAAACTG+TGG | + | chr7_3:3572787-3572806 | None:intergenic | 40.0% | |
| ATTTCCTTCTGTGGACAAAG+AGG | + | chr7_3:3573066-3573085 | None:intergenic | 40.0% | |
| !! | ATCTCCTGGTTTTTATGGAG+TGG | - | chr7_3:3573192-3573211 | Msa1089960:intron | 40.0% |
| AGCAGATATGTTTGTAGGGA+GGG | - | chr7_3:3573616-3573635 | Msa1089960:intron | 40.0% | |
| !!! | GAGCTTTTGGGATGATATTG+AGG | - | chr7_3:3573706-3573725 | Msa1089960:intron | 40.0% |
| ! | ATTTGGGACGCATCTTTGTA+AGG | - | chr7_3:3573886-3573905 | Msa1089960:intron | 40.0% |
| !! | CATCTTTGTAAGGCTAGTCT+TGG | - | chr7_3:3573896-3573915 | Msa1089960:intron | 40.0% |
| TGGTTGTTAGGAACTTGGAT+AGG | + | chr7_3:3573946-3573965 | None:intergenic | 40.0% | |
| AGCAATACATGCGGTTATGT+TGG | + | chr7_3:3574770-3574789 | None:intergenic | 40.0% | |
| ! | ATGTCAGCATTTTCTGCAAC+AGG | - | chr7_3:3575022-3575041 | Msa1089960:intron | 40.0% |
| ! | TGTCAGCATTTTCTGCAACA+GGG | - | chr7_3:3575023-3575042 | Msa1089960:intron | 40.0% |
| ! | ATGATGTTTTTCTCACCCCT+TGG | - | chr7_3:3575457-3575476 | Msa1089960:five_prime_UTR | 40.0% |
| !! | AAAAATGAAAGGGGTGCCAA+GGG | + | chr7_3:3575476-3575495 | None:intergenic | 40.0% |
| AAACGCAAGCCAAATTTGAC+GGG | + | chr7_3:3575559-3575578 | None:intergenic | 40.0% | |
| CAAACGCAAGCCAAATTTGA+CGG | + | chr7_3:3575560-3575579 | None:intergenic | 40.0% | |
| CTCTATGATCCCTAACCAAG+CGG | + | chr7_3:3566370-3566389 | None:intergenic | 45.0% | |
| ! | CCTTCGTGATCTTGTTATGG+CGG | - | chr7_3:3566568-3566587 | Msa1089960:three_prime_UTR | 45.0% |
| ATCTTCACGGTCAAGAGCTA+CGG | - | chr7_3:3566610-3566629 | Msa1089960:three_prime_UTR | 45.0% | |
| GCGGCGAGTGTTAAAGAAAA+TGG | - | chr7_3:3566632-3566651 | Msa1089960:three_prime_UTR | 45.0% | |
| TTAGAAACAACGGGGCTGTT+TGG | - | chr7_3:3567056-3567075 | Msa1089960:CDS | 45.0% | |
| TGTTGGGGTTATGTTGGTGT+GGG | + | chr7_3:3567339-3567358 | None:intergenic | 45.0% | |
| GAAGGTAATCACGTGTGTTG+GGG | + | chr7_3:3567354-3567373 | None:intergenic | 45.0% | |
| CAAGATACAGGCAGGTTTGA+GGG | + | chr7_3:3567619-3567638 | None:intergenic | 45.0% | |
| ACAAGATACAGGCAGGTTTG+AGG | + | chr7_3:3567620-3567639 | None:intergenic | 45.0% | |
| TCGCAATTGCAGTTGTTGAC+CGG | - | chr7_3:3567642-3567661 | Msa1089960:intron | 45.0% | |
| CAAGAAATCTTCTCCCTGCA+TGG | + | chr7_3:3568059-3568078 | None:intergenic | 45.0% | |
| !! | CAAAGCATCACCTTGCTGTT+CGG | - | chr7_3:3568429-3568448 | Msa1089960:intron | 45.0% |
| ACAGATGGGTGAGATAGAAG+AGG | - | chr7_3:3568639-3568658 | Msa1089960:intron | 45.0% | |
| !! | TTCAGGTACTGGTTGTCTGA+CGG | - | chr7_3:3568670-3568689 | Msa1089960:intron | 45.0% |
| TCCCCTATTGTCCCACAATT+GGG | - | chr7_3:3569236-3569255 | Msa1089960:intron | 45.0% | |
| ACCCCAATTGTGGGACAATA+GGG | + | chr7_3:3569241-3569260 | None:intergenic | 45.0% | |
| CTCATGACTGATGAAGAGCA+AGG | - | chr7_3:3569312-3569331 | Msa1089960:intron | 45.0% | |
| CACTACTACATATGTGCGCA+TGG | + | chr7_3:3569480-3569499 | None:intergenic | 45.0% | |
| !! | AAAAGCTTGAAGGGCACCAA+TGG | + | chr7_3:3569748-3569767 | None:intergenic | 45.0% |
| ! | GAGGAAGTACAATCCAGAAC+TGG | + | chr7_3:3569902-3569921 | None:intergenic | 45.0% |
| !! | GTATTTTGAGGGTGCAGAAG+AGG | - | chr7_3:3569931-3569950 | Msa1089960:CDS | 45.0% |
| !! | ATTTTGAGGGTGCAGAAGAG+GGG | - | chr7_3:3569933-3569952 | Msa1089960:CDS | 45.0% |
| CCCTGTATGTGGTGTAAATC+TGG | - | chr7_3:3570149-3570168 | Msa1089960:intron | 45.0% | |
| CCCAGATTTACACCACATAC+AGG | + | chr7_3:3570153-3570172 | None:intergenic | 45.0% | |
| GTAAATCTGGGTATGGCAGT+TGG | - | chr7_3:3570162-3570181 | Msa1089960:intron | 45.0% | |
| AAATCTGGGTATGGCAGTTG+GGG | - | chr7_3:3570164-3570183 | Msa1089960:intron | 45.0% | |
| AGGTTGCTTGAGTGGATAGT+AGG | + | chr7_3:3570423-3570442 | None:intergenic | 45.0% | |
| ATCGGCCAAACCATGTATCA+AGG | + | chr7_3:3570443-3570462 | None:intergenic | 45.0% | |
| ! | TTGATACATGGTTTGGCCGA+TGG | - | chr7_3:3570442-3570461 | Msa1089960:intron | 45.0% |
| TGGATGTTCTCTTGGCTGAA+AGG | - | chr7_3:3570587-3570606 | Msa1089960:intron | 45.0% | |
| AAGGCGAGTAGAAGAAGCTT+TGG | - | chr7_3:3570606-3570625 | Msa1089960:intron | 45.0% | |
| ACGTTCTCCTTCATCAAGAG+CGG | + | chr7_3:3570632-3570651 | None:intergenic | 45.0% | |
| ATGCACGAAGTTCAGATCCA+CGG | + | chr7_3:3570783-3570802 | None:intergenic | 45.0% | |
| GCCCTTAAAAAACTTGGGGA+TGG | - | chr7_3:3570811-3570830 | Msa1089960:CDS | 45.0% | |
| ! | CCTCCATATGAGGTGTTTGA+CGG | + | chr7_3:3570907-3570926 | None:intergenic | 45.0% |
| ACAAGCTGCAAGTGACTCAT+TGG | - | chr7_3:3570972-3570991 | Msa1089960:CDS | 45.0% | |
| ! | TCTGGTGAAAAGGCATGCAT+TGG | - | chr7_3:3571071-3571090 | Msa1089960:CDS | 45.0% |
| !! | ACAAGAGAGTACTGCTGCTA+TGG | - | chr7_3:3571260-3571279 | Msa1089960:CDS | 45.0% |
| TATGGCTGCTGCTGATGATT+GGG | - | chr7_3:3571278-3571297 | Msa1089960:CDS | 45.0% | |
| TGCCCATCGCTTCAATTTGA+TGG | - | chr7_3:3571374-3571393 | Msa1089960:CDS | 45.0% | |
| ! | CAGGACTTCTTTGAGGATGT+AGG | - | chr7_3:3571917-3571936 | Msa1089960:intron | 45.0% |
| ACCTCTGCTTAGTATGCAGT+TGG | - | chr7_3:3571940-3571959 | Msa1089960:intron | 45.0% | |
| CCTCTGCTTAGTATGCAGTT+GGG | - | chr7_3:3571941-3571960 | Msa1089960:intron | 45.0% | |
| GGACGAAGAAGAAAGCTTTG+AGG | - | chr7_3:3572042-3572061 | Msa1089960:intron | 45.0% | |
| AATCTGCTGGGCTTCAGTTT+CGG | + | chr7_3:3572095-3572114 | None:intergenic | 45.0% | |
| GCTAGCTAATGCCTCATTAC+TGG | - | chr7_3:3572120-3572139 | Msa1089960:intron | 45.0% | |
| ACAGGAATCTTGGTTTAGGG+AGG | + | chr7_3:3572182-3572201 | None:intergenic | 45.0% | |
| ACCGTAGAAGAACCACAGAA+AGG | - | chr7_3:3572212-3572231 | Msa1089960:intron | 45.0% | |
| GCCTTTCTGTGGTTCTTCTA+CGG | + | chr7_3:3572216-3572235 | None:intergenic | 45.0% | |
| GGCAGAAAGGAAAAGTAGAG+AGG | + | chr7_3:3572594-3572613 | None:intergenic | 45.0% | |
| GAAGAAAAGAGCAGGCAGAA+AGG | + | chr7_3:3572607-3572626 | None:intergenic | 45.0% | |
| ! | GCCTGCTCTTTTCTTCTTGT+TGG | - | chr7_3:3572611-3572630 | Msa1089960:intron | 45.0% |
| CCCAACAAGAAGAAAAGAGC+AGG | + | chr7_3:3572615-3572634 | None:intergenic | 45.0% | |
| CTTGTTGGGAACTTCTCTGT+TGG | - | chr7_3:3572626-3572645 | Msa1089960:intron | 45.0% | |
| TGTTGGGAACTTCTCTGTTG+GGG | - | chr7_3:3572628-3572647 | Msa1089960:intron | 45.0% | |
| TGTTGGGGATATGTGTAACG+AGG | - | chr7_3:3572643-3572662 | Msa1089960:intron | 45.0% | |
| !! | GAAACTCTTACGGCATTGAC+TGG | - | chr7_3:3572903-3572922 | Msa1089960:intron | 45.0% |
| TGTTCCTCTTTGTCCACAGA+AGG | - | chr7_3:3573059-3573078 | Msa1089960:intron | 45.0% | |
| AGTTGTCTACCTAGGGACAT+GGG | + | chr7_3:3573262-3573281 | None:intergenic | 45.0% | |
| AAGTTGTCTACCTAGGGACA+TGG | + | chr7_3:3573263-3573282 | None:intergenic | 45.0% | |
| CAGCAGATATGTTTGTAGGG+AGG | - | chr7_3:3573615-3573634 | Msa1089960:intron | 45.0% | |
| ATGATATTGAGGAAGGGCCA+AGG | - | chr7_3:3573717-3573736 | Msa1089960:intron | 45.0% | |
| TGTAGACCAAGAGGACCTAA+AGG | + | chr7_3:3573743-3573762 | None:intergenic | 45.0% | |
| CATACCTGTTGTAGACCAAG+AGG | + | chr7_3:3573752-3573771 | None:intergenic | 45.0% | |
| AACTTGGATAGGTCAGTGCT+TGG | + | chr7_3:3573935-3573954 | None:intergenic | 45.0% | |
| TCCAAGTTCCTAACAACCAG+TGG | - | chr7_3:3573947-3573966 | Msa1089960:intron | 45.0% | |
| ! | ACCACTGGTTGTTAGGAACT+TGG | + | chr7_3:3573951-3573970 | None:intergenic | 45.0% |
| ! | GTTGTGTGTTTTGCCTCCAA+CGG | - | chr7_3:3574944-3574963 | Msa1089960:intron | 45.0% |
| ! | AGCATTTTCTGCAACAGGGA+TGG | - | chr7_3:3575027-3575046 | Msa1089960:intron | 45.0% |
| TTCAGAGCCACAACTTCCAA+TGG | + | chr7_3:3575130-3575149 | None:intergenic | 45.0% | |
| GTGATCTGCCTGAAGATGAA+TGG | - | chr7_3:3575195-3575214 | Msa1089960:intron | 45.0% | |
| CTCTCCCCGTTTATTTCCTT+TGG | + | chr7_3:3575266-3575285 | None:intergenic | 45.0% | |
| !! | AAAATGAAAGGGGTGCCAAG+GGG | + | chr7_3:3575475-3575494 | None:intergenic | 45.0% |
| !! | CAAAAATGAAAGGGGTGCCA+AGG | + | chr7_3:3575477-3575496 | None:intergenic | 45.0% |
| CCGCCATAACAAGATCACGA+AGG | + | chr7_3:3566571-3566590 | None:intergenic | 50.0% | |
| ! | TCGTGATCTTGTTATGGCGG+CGG | - | chr7_3:3566571-3566590 | Msa1089960:three_prime_UTR | 50.0% |
| ACACTGATACGTGTCGGACA+CGG | + | chr7_3:3567316-3567335 | None:intergenic | 50.0% | |
| TGTGGGACACTGATACGTGT+CGG | + | chr7_3:3567322-3567341 | None:intergenic | 50.0% | |
| GTGTTGGGGTTATGTTGGTG+TGG | + | chr7_3:3567340-3567359 | None:intergenic | 50.0% | |
| CACGTGTGTTGGGGTTATGT+TGG | + | chr7_3:3567345-3567364 | None:intergenic | 50.0% | |
| TGCGACAACAAGATACAGGC+AGG | + | chr7_3:3567627-3567646 | None:intergenic | 50.0% | |
| CTTGAAAAGAGCTTCTGCCG+AGG | - | chr7_3:3568187-3568206 | Msa1089960:intron | 50.0% | |
| CCAAGACTCACCCAACTAGT+GGG | - | chr7_3:3568452-3568471 | Msa1089960:intron | 50.0% | |
| GCACTAAGCTCCCACTAGTT+GGG | + | chr7_3:3568465-3568484 | None:intergenic | 50.0% | |
| TGCACTAAGCTCCCACTAGT+TGG | + | chr7_3:3568466-3568485 | None:intergenic | 50.0% | |
| GGTGAGATAGAAGAGGCAGT+GGG | - | chr7_3:3568646-3568665 | Msa1089960:intron | 50.0% | |
| ! | TAGAAGAGGCAGTGGGTTTC+AGG | - | chr7_3:3568653-3568672 | Msa1089960:intron | 50.0% |
| CAATTGTGGGACAATAGGGG+AGG | + | chr7_3:3569237-3569256 | None:intergenic | 50.0% | |
| CTCCCCTATTGTCCCACAAT+TGG | - | chr7_3:3569235-3569254 | Msa1089960:intron | 50.0% | |
| CCCCAATTGTGGGACAATAG+GGG | + | chr7_3:3569240-3569259 | None:intergenic | 50.0% | |
| CCCCTATTGTCCCACAATTG+GGG | - | chr7_3:3569237-3569256 | Msa1089960:intron | 50.0% | |
| GACCCCAATTGTGGGACAAT+AGG | + | chr7_3:3569242-3569261 | None:intergenic | 50.0% | |
| TACAATCCAGAACTGGGCTG+TGG | + | chr7_3:3569895-3569914 | None:intergenic | 50.0% | |
| !! | TTTTGAGGGTGCAGAAGAGG+GGG | - | chr7_3:3569934-3569953 | Msa1089960:CDS | 50.0% |
| AATCTGGGTATGGCAGTTGG+GGG | - | chr7_3:3570165-3570184 | Msa1089960:intron | 50.0% | |
| AGTTCAGATCCACGGGTAGA+AGG | + | chr7_3:3570775-3570794 | None:intergenic | 50.0% | |
| TGCACGAAGTTCAGATCCAC+GGG | + | chr7_3:3570782-3570801 | None:intergenic | 50.0% | |
| AGTAGCAAGCTGTGAGCATG+CGG | + | chr7_3:3570838-3570857 | None:intergenic | 50.0% | |
| ! | CATATGAGGTGTTTGACGGC+CGG | + | chr7_3:3570903-3570922 | None:intergenic | 50.0% |
| CCGTCAAACACCTCATATGG+AGG | - | chr7_3:3570904-3570923 | Msa1089960:CDS | 50.0% | |
| ! | TACTGCAGCTCTAGCACAAC+TGG | - | chr7_3:3570933-3570952 | Msa1089960:CDS | 50.0% |
| AGGAGGTTTAAGAGCTGCTG+CGG | - | chr7_3:3571110-3571129 | Msa1089960:CDS | 50.0% | |
| CTATGGCTGCTGCTGATGAT+TGG | - | chr7_3:3571277-3571296 | Msa1089960:CDS | 50.0% | |
| ! | GTCTGCCGATTAGCATTAGG+AGG | + | chr7_3:3571315-3571334 | None:intergenic | 50.0% |
| CCTAATGCTAATCGGCAGAC+CGG | - | chr7_3:3571315-3571334 | Msa1089960:CDS | 50.0% | |
| CCCAACTGCATACTAAGCAG+AGG | + | chr7_3:3571944-3571963 | None:intergenic | 50.0% | |
| CTGCTTAGTATGCAGTTGGG+AGG | - | chr7_3:3571944-3571963 | Msa1089960:intron | 50.0% | |
| AGCTAGCAGTGCAATCTGCT+GGG | + | chr7_3:3572107-3572126 | None:intergenic | 50.0% | |
| TAGCTAGCAGTGCAATCTGC+TGG | + | chr7_3:3572108-3572127 | None:intergenic | 50.0% | |
| GTTTAGGGAGGAGAGCTTCA+TGG | + | chr7_3:3572170-3572189 | None:intergenic | 50.0% | |
| GTCATCCTGAACAACGGGAA+TGG | - | chr7_3:3572242-3572261 | Msa1089960:intron | 50.0% | |
| ATCCTGAACAACGGGAATGG+AGG | - | chr7_3:3572245-3572264 | Msa1089960:intron | 50.0% | |
| !! | CATCTTAGTGGGTTCAGGCT+TGG | - | chr7_3:3573288-3573307 | Msa1089960:intron | 50.0% |
| AGGTCCTCTTGGTCTACAAC+AGG | - | chr7_3:3573745-3573764 | Msa1089960:intron | 50.0% | |
| AAGGACGGCCAGAATCCAAA+AGG | + | chr7_3:3574612-3574631 | None:intergenic | 50.0% | |
| ! | TGTGTTTTGCCTCCAACGGT+CGG | - | chr7_3:3574948-3574967 | Msa1089960:intron | 50.0% |
| TGACAAATACCGACCGTTGG+AGG | + | chr7_3:3574960-3574979 | None:intergenic | 50.0% | |
| CCTTGACAAATACCGACCGT+TGG | + | chr7_3:3574963-3574982 | None:intergenic | 50.0% | |
| CCAACGGTCGGTATTTGTCA+AGG | - | chr7_3:3574960-3574979 | Msa1089960:intron | 50.0% | |
| CAACAGGGATGGATCCGTAT+AGG | - | chr7_3:3575038-3575057 | Msa1089960:intron | 50.0% | |
| GTGCAGAGACAGATGCAGTA+GGG | + | chr7_3:3575301-3575320 | None:intergenic | 50.0% | |
| TGTGCAGAGACAGATGCAGT+AGG | + | chr7_3:3575302-3575321 | None:intergenic | 50.0% | |
| TCACGCGCACTGTGTGTGTT+TGG | + | chr7_3:3566423-3566442 | None:intergenic | 55.0% | |
| TTCACGGTCAAGAGCTACGG+CGG | - | chr7_3:3566613-3566632 | Msa1089960:three_prime_UTR | 55.0% | |
| CACTGATACGTGTCGGACAC+GGG | + | chr7_3:3567315-3567334 | None:intergenic | 55.0% | |
| GACACTTCTGCGCATCTCCT+CGG | + | chr7_3:3568207-3568226 | None:intergenic | 55.0% | |
| TGAGTCTTGGCCGAACAGCA+AGG | + | chr7_3:3568442-3568461 | None:intergenic | 55.0% | |
| GCCAAGACTCACCCAACTAG+TGG | - | chr7_3:3568451-3568470 | Msa1089960:intron | 55.0% | |
| CCCACTAGTTGGGTGAGTCT+TGG | + | chr7_3:3568455-3568474 | None:intergenic | 55.0% | |
| GGGTGAGATAGAAGAGGCAG+TGG | - | chr7_3:3568645-3568664 | Msa1089960:intron | 55.0% | |
| ! | AGGCAGTGGGTTTCAGGTAC+TGG | - | chr7_3:3568659-3568678 | Msa1089960:intron | 55.0% |
| ATCTGGGTATGGCAGTTGGG+GGG | - | chr7_3:3570166-3570185 | Msa1089960:intron | 55.0% | |
| GCTTTGGCCGCTCTTGATGA+AGG | - | chr7_3:3570622-3570641 | Msa1089960:CDS | 55.0% | |
| CGGCCGTCAAACACCTCATA+TGG | - | chr7_3:3570901-3570920 | Msa1089960:CDS | 55.0% | |
| TTGGCTTCATCAGCAGCTGC+AGG | - | chr7_3:3571090-3571109 | Msa1089960:CDS | 55.0% | |
| ! | CCGGTCTGCCGATTAGCATT+AGG | + | chr7_3:3571318-3571337 | None:intergenic | 55.0% |
| !! | TTGGGAGGACAAGCTCTGGA+AGG | - | chr7_3:3571959-3571978 | Msa1089960:intron | 55.0% |
| !! | TGGGAGGACAAGCTCTGGAA+GGG | - | chr7_3:3571960-3571979 | Msa1089960:intron | 55.0% |
| CTCCTCCATTCCCGTTGTTC+AGG | + | chr7_3:3572250-3572269 | None:intergenic | 55.0% | |
| GAATGGAGGAGACGACTCGT+GGG | - | chr7_3:3572259-3572278 | Msa1089960:intron | 55.0% | |
| GACTCGTGGGTTCAGTTGAC+AGG | - | chr7_3:3572272-3572291 | Msa1089960:intron | 55.0% | |
| CGGGGTGCATATCTATCTCC+TGG | - | chr7_3:3573178-3573197 | Msa1089960:intron | 55.0% | |
| TGTCTACCTAGGGACATGGG+AGG | + | chr7_3:3573259-3573278 | None:intergenic | 55.0% | |
| CCAAGAGGACCTAAAGGCCT+TGG | + | chr7_3:3573737-3573756 | None:intergenic | 55.0% | |
| CCAAGGCCTTTAGGTCCTCT+TGG | - | chr7_3:3573734-3573753 | Msa1089960:intron | 55.0% | |
| TAGATTGGCGCGTGTGTGCG+TGG | - | chr7_3:3566509-3566528 | Msa1089960:three_prime_UTR | 60.0% | |
| TCTGGGTATGGCAGTTGGGG+GGG | - | chr7_3:3570167-3570186 | Msa1089960:intron | 60.0% | |
| GCTTGTCAGCCTTCTACCCG+TGG | - | chr7_3:3570763-3570782 | Msa1089960:CDS | 60.0% | |
| GCTTCATCAGCAGCTGCAGG+AGG | - | chr7_3:3571093-3571112 | Msa1089960:CDS | 60.0% | |
| GCAGTTGGGAGGACAAGCTC+TGG | - | chr7_3:3571955-3571974 | Msa1089960:intron | 60.0% | |
| GGAATGGAGGAGACGACTCG+TGG | - | chr7_3:3572258-3572277 | Msa1089960:intron | 60.0% | |
| GAAGCTCCTCCCATGTCCCT+AGG | - | chr7_3:3573250-3573269 | Msa1089960:intron | 60.0% | |
| GAGGAAGGGCCAAGGCCTTT+AGG | - | chr7_3:3573725-3573744 | Msa1089960:intron | 60.0% | |
| GCTCTGCCACAGCCCAGTTC+TGG | - | chr7_3:3569886-3569905 | Msa1089960:CDS | 65.0% | |
| CTGGGTATGGCAGTTGGGGG+GGG | - | chr7_3:3570168-3570187 | Msa1089960:intron | 65.0% | |
| TGGGTATGGCAGTTGGGGGG+GGG | - | chr7_3:3570169-3570188 | Msa1089960:intron | 65.0% | |
| GAGAGCTTCATGGCTGCGCG+TGG | + | chr7_3:3572160-3572179 | None:intergenic | 65.0% | |
| GGGTATGGCAGTTGGGGGGG+GGG | - | chr7_3:3570170-3570189 | Msa1089960:intron | 70.0% | |
| GGTATGGCAGTTGGGGGGGG+GGG | - | chr7_3:3570171-3570190 | Msa1089960:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 3566365 | 3575645 | 3566365 | ID=Msa1089960;Name=Msa1089960 |
| chr7_3 | mRNA | 3566365 | 3575645 | 3566365 | ID=Msa1089960-mRNA-1;Parent=Msa1089960;Name=Msa1089960-mRNA-1;_AED=0.05;_eAED=0.05;_QI=219|1|1|1|1|1|7|287|765 |
| chr7_3 | exon | 3566365 | 3566814 | 3566365 | ID=Msa1089960-mRNA-1:exon:1421;Parent=Msa1089960-mRNA-1 |
| chr7_3 | exon | 3566951 | 3567087 | 3566951 | ID=Msa1089960-mRNA-1:exon:1420;Parent=Msa1089960-mRNA-1 |
| chr7_3 | exon | 3568244 | 3568432 | 3568244 | ID=Msa1089960-mRNA-1:exon:1419;Parent=Msa1089960-mRNA-1 |
| chr7_3 | exon | 3569575 | 3570090 | 3569575 | ID=Msa1089960-mRNA-1:exon:1418;Parent=Msa1089960-mRNA-1 |
| chr7_3 | exon | 3570609 | 3571641 | 3570609 | ID=Msa1089960-mRNA-1:exon:1417;Parent=Msa1089960-mRNA-1 |
| chr7_3 | exon | 3573758 | 3573855 | 3573758 | ID=Msa1089960-mRNA-1:exon:1416;Parent=Msa1089960-mRNA-1 |
| chr7_3 | exon | 3575265 | 3575645 | 3575265 | ID=Msa1089960-mRNA-1:exon:1415;Parent=Msa1089960-mRNA-1 |
| chr7_3 | five_prime_UTR | 3575427 | 3575645 | 3575427 | ID=Msa1089960-mRNA-1:five_prime_utr;Parent=Msa1089960-mRNA-1 |
| chr7_3 | CDS | 3575265 | 3575426 | 3575265 | ID=Msa1089960-mRNA-1:cds;Parent=Msa1089960-mRNA-1 |
| chr7_3 | CDS | 3573758 | 3573855 | 3573758 | ID=Msa1089960-mRNA-1:cds;Parent=Msa1089960-mRNA-1 |
| chr7_3 | CDS | 3570609 | 3571641 | 3570609 | ID=Msa1089960-mRNA-1:cds;Parent=Msa1089960-mRNA-1 |
| chr7_3 | CDS | 3569575 | 3570090 | 3569575 | ID=Msa1089960-mRNA-1:cds;Parent=Msa1089960-mRNA-1 |
| chr7_3 | CDS | 3568244 | 3568432 | 3568244 | ID=Msa1089960-mRNA-1:cds;Parent=Msa1089960-mRNA-1 |
| chr7_3 | CDS | 3566951 | 3567087 | 3566951 | ID=Msa1089960-mRNA-1:cds;Parent=Msa1089960-mRNA-1 |
| chr7_3 | CDS | 3566652 | 3566814 | 3566652 | ID=Msa1089960-mRNA-1:cds;Parent=Msa1089960-mRNA-1 |
| chr7_3 | three_prime_UTR | 3566365 | 3566651 | 3566365 | ID=Msa1089960-mRNA-1:three_prime_utr;Parent=Msa1089960-mRNA-1 |
| Gene Sequence |
| Protein sequence |
