Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0053080 | AES59281.1 | 86.804 | 341 | 23 | 1 | 1 | 341 | 17 | 335 | 0.0 | 589 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0053080 | sp|Q3EBZ2|SKI23_ARATH | 34.930 | 355 | 188 | 11 | 5 | 325 | 3 | 348 | 6.01e-45 | 161 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0053080 | G7IB97 | 86.804 | 341 | 23 | 1 | 1 | 341 | 17 | 335 | 0.0 | 589 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006110 | Msa0053080 | 0.809571 | 1.771882e-50 | -8.615850e-47 |
| Msa0053080 | Msa0212990 | 0.803810 | 2.918143e-49 | -8.615850e-47 |
| Msa0053080 | Msa0290870 | 0.814290 | 1.661230e-51 | -8.615850e-47 |
| Msa0053080 | Msa0308460 | 0.800862 | 1.180895e-48 | -8.615850e-47 |
| Msa0053080 | Msa0330340 | 0.802711 | 4.927495e-49 | -8.615850e-47 |
| Msa0053080 | Msa0385840 | 0.810829 | 9.488973e-51 | -8.615850e-47 |
| Msa0053080 | Msa0518380 | 0.801300 | 9.609911e-49 | -8.615850e-47 |
| Msa0053080 | Msa0545850 | 0.801347 | 9.399550e-49 | -8.615850e-47 |
| Msa0053080 | Msa0598160 | 0.817219 | 3.693968e-52 | -8.615850e-47 |
| Msa0053080 | Msa0636020 | 0.808836 | 2.546575e-50 | -8.615850e-47 |
| Msa0053080 | Msa0637900 | 0.805208 | 1.491286e-49 | -8.615850e-47 |
| Msa0053080 | Msa0763890 | 0.805633 | 1.215005e-49 | -8.615850e-47 |
| Msa0053080 | Msa0763920 | 0.805659 | 1.199936e-49 | -8.615850e-47 |
| Msa0053080 | Msa0797770 | 0.801435 | 9.015493e-49 | -8.615850e-47 |
| Msa0053080 | Msa0817460 | 0.807542 | 4.803916e-50 | -8.615850e-47 |
| Msa0053080 | Msa0835230 | 0.801363 | 9.328770e-49 | -8.615850e-47 |
| Msa0053080 | Msa0844490 | 0.802053 | 6.734134e-49 | -8.615850e-47 |
| Msa0053080 | Msa0914270 | 0.816815 | 4.553028e-52 | -8.615850e-47 |
| Msa0053080 | Msa1121480 | 0.804255 | 2.358619e-49 | -8.615850e-47 |
| Msa0053080 | Msa1121490 | 0.814605 | 1.415245e-51 | -8.615850e-47 |
| Msa0053080 | Msa1277660 | 0.806451 | 8.172867e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0053080 | MtrunA17_Chr1g0151721 | 84.164 | 341 | 20 | 1 | 1 | 341 | 17 | 323 | 0.0 | 565 |
| Msa0053080 | MtrunA17_Chr3g0088841 | 55.307 | 358 | 126 | 9 | 2 | 340 | 4 | 346 | 7.47e-116 | 340 |
| Msa0053080 | MtrunA17_Chr2g0303111 | 55.056 | 356 | 123 | 13 | 5 | 341 | 6 | 343 | 1.94e-111 | 328 |
| Msa0053080 | MtrunA17_Chr3g0088751 | 50.278 | 360 | 149 | 9 | 1 | 341 | 1 | 349 | 4.15e-102 | 305 |
| Msa0053080 | MtrunA17_Chr3g0088931 | 50.716 | 349 | 132 | 9 | 1 | 326 | 1 | 332 | 5.24e-96 | 290 |
| Msa0053080 | MtrunA17_Chr3g0089001 | 48.876 | 356 | 141 | 10 | 1 | 341 | 31 | 360 | 8.93e-94 | 284 |
| Msa0053080 | MtrunA17_Chr3g0088951 | 49.153 | 354 | 145 | 9 | 1 | 341 | 1 | 332 | 3.70e-93 | 281 |
| Msa0053080 | MtrunA17_Chr3g0088601 | 46.400 | 375 | 154 | 10 | 1 | 341 | 13 | 374 | 4.06e-92 | 280 |
| Msa0053080 | MtrunA17_Chr6g0457501 | 46.849 | 365 | 161 | 9 | 1 | 341 | 1 | 356 | 1.26e-91 | 280 |
| Msa0053080 | MtrunA17_Chr1g0146401 | 46.991 | 349 | 155 | 12 | 1 | 329 | 18 | 356 | 4.86e-88 | 270 |
| Msa0053080 | MtrunA17_Chr3g0088551 | 44.357 | 381 | 166 | 10 | 1 | 341 | 1 | 375 | 2.20e-87 | 268 |
| Msa0053080 | MtrunA17_Chr3g0088631 | 43.733 | 375 | 164 | 10 | 1 | 341 | 1 | 362 | 1.07e-86 | 266 |
| Msa0053080 | MtrunA17_Chr6g0457531 | 47.645 | 361 | 149 | 12 | 1 | 341 | 1 | 341 | 1.22e-85 | 263 |
| Msa0053080 | MtrunA17_Chr3g0088671 | 48.696 | 345 | 132 | 12 | 1 | 323 | 1 | 322 | 3.57e-85 | 261 |
| Msa0053080 | MtrunA17_Chr6g0460451 | 47.414 | 348 | 141 | 11 | 1 | 318 | 1 | 336 | 1.55e-83 | 258 |
| Msa0053080 | MtrunA17_Chr6g0460421 | 46.264 | 348 | 145 | 10 | 1 | 318 | 1 | 336 | 4.51e-81 | 251 |
| Msa0053080 | MtrunA17_Chr6g0457541 | 46.409 | 362 | 155 | 14 | 1 | 341 | 1 | 344 | 1.13e-79 | 247 |
| Msa0053080 | MtrunA17_Chr3g0127321 | 43.445 | 389 | 153 | 13 | 2 | 341 | 32 | 402 | 2.52e-79 | 249 |
| Msa0053080 | MtrunA17_Chr3g0088621 | 41.953 | 379 | 161 | 13 | 2 | 341 | 13 | 371 | 7.65e-79 | 246 |
| Msa0053080 | MtrunA17_Chr1g0170781 | 43.351 | 376 | 154 | 12 | 4 | 341 | 18 | 372 | 1.50e-78 | 246 |
| Msa0053080 | MtrunA17_Chr3g0088991 | 44.507 | 355 | 141 | 11 | 2 | 341 | 3 | 316 | 8.50e-78 | 242 |
| Msa0053080 | MtrunA17_Chr3g0088741 | 46.133 | 362 | 145 | 15 | 1 | 341 | 1 | 333 | 2.55e-77 | 241 |
| Msa0053080 | MtrunA17_Chr1g0157711 | 45.758 | 330 | 157 | 9 | 3 | 320 | 4 | 323 | 6.22e-77 | 240 |
| Msa0053080 | MtrunA17_Chr3g0127311 | 43.164 | 373 | 166 | 12 | 1 | 341 | 3 | 361 | 6.37e-76 | 239 |
| Msa0053080 | MtrunA17_Chr3g0088721 | 44.476 | 353 | 141 | 12 | 3 | 324 | 7 | 335 | 4.41e-75 | 236 |
| Msa0053080 | MtrunA17_Chr3g0088921 | 41.299 | 385 | 164 | 14 | 2 | 341 | 3 | 370 | 1.81e-72 | 229 |
| Msa0053080 | MtrunA17_Chr3g0088831 | 36.616 | 396 | 179 | 11 | 4 | 341 | 15 | 396 | 6.14e-66 | 214 |
| Msa0053080 | MtrunA17_Chr3g0089051 | 44.706 | 340 | 145 | 16 | 4 | 318 | 57 | 378 | 3.61e-65 | 212 |
| Msa0053080 | MtrunA17_Chr3g0089041 | 43.324 | 367 | 160 | 16 | 3 | 341 | 2 | 348 | 4.82e-65 | 210 |
| Msa0053080 | MtrunA17_Chr3g0088541 | 43.478 | 345 | 135 | 15 | 4 | 318 | 3 | 317 | 8.94e-62 | 201 |
| Msa0053080 | MtrunA17_Chr1g0151701 | 67.516 | 157 | 45 | 4 | 188 | 341 | 1 | 154 | 2.96e-61 | 194 |
| Msa0053080 | MtrunA17_Chr3g0088531 | 42.522 | 341 | 154 | 14 | 4 | 318 | 2 | 326 | 4.48e-60 | 197 |
| Msa0053080 | MtrunA17_Chr3g0088641 | 40.341 | 352 | 152 | 15 | 4 | 327 | 3 | 324 | 2.88e-54 | 181 |
| Msa0053080 | MtrunA17_Chr3g0096401 | 41.228 | 342 | 145 | 14 | 5 | 327 | 30 | 334 | 1.00e-47 | 165 |
| Msa0053080 | MtrunA17_Chr3g0088661 | 40.351 | 342 | 115 | 13 | 5 | 320 | 9 | 287 | 5.47e-47 | 162 |
| Msa0053080 | MtrunA17_Chr3g0088561 | 53.503 | 157 | 61 | 3 | 188 | 341 | 1 | 148 | 8.31e-47 | 156 |
| Msa0053080 | MtrunA17_Chr3g0088701 | 39.826 | 344 | 118 | 13 | 3 | 320 | 7 | 287 | 1.01e-45 | 158 |
| Msa0053080 | MtrunA17_Chr7g0214521 | 36.240 | 367 | 169 | 15 | 3 | 341 | 10 | 339 | 1.37e-42 | 151 |
| Msa0053080 | MtrunA17_Chr5g0417881 | 51.176 | 170 | 76 | 3 | 173 | 341 | 12 | 175 | 8.76e-42 | 144 |
| Msa0053080 | MtrunA17_Chr3g0088711 | 55.102 | 147 | 46 | 3 | 179 | 323 | 19 | 147 | 1.06e-40 | 141 |
| Msa0053080 | MtrunA17_Chr8g0371031 | 30.286 | 350 | 199 | 10 | 5 | 321 | 25 | 362 | 4.30e-38 | 140 |
| Msa0053080 | MtrunA17_Chr8g0392121 | 48.701 | 154 | 71 | 2 | 188 | 341 | 4 | 149 | 2.61e-37 | 132 |
| Msa0053080 | MtrunA17_Chr3g0088691 | 48.000 | 175 | 75 | 7 | 1 | 163 | 1 | 171 | 7.91e-36 | 128 |
| Msa0053080 | MtrunA17_Chr1g0146371 | 42.246 | 187 | 69 | 3 | 156 | 341 | 2 | 150 | 1.18e-34 | 125 |
| Msa0053080 | MtrunA17_Chr3g0088571 | 49.342 | 152 | 59 | 3 | 1 | 134 | 1 | 152 | 8.11e-33 | 119 |
| Msa0053080 | MtrunA17_Chr3g0092331 | 44.379 | 169 | 64 | 5 | 190 | 341 | 1 | 156 | 1.29e-32 | 120 |
| Msa0053080 | MtrunA17_Chr3g0088581 | 41.899 | 179 | 82 | 4 | 154 | 320 | 2 | 170 | 1.26e-31 | 118 |
| Msa0053080 | MtrunA17_Chr2g0300541 | 30.833 | 360 | 176 | 12 | 5 | 320 | 26 | 356 | 1.28e-31 | 122 |
| Msa0053080 | MtrunA17_Chr3g0088681 | 50.735 | 136 | 45 | 3 | 188 | 320 | 1 | 117 | 3.84e-31 | 115 |
| Msa0053080 | MtrunA17_Chr8g0371101 | 30.189 | 371 | 208 | 12 | 5 | 341 | 6 | 359 | 1.15e-30 | 119 |
| Msa0053080 | MtrunA17_Chr6g0457511 | 51.667 | 120 | 49 | 2 | 188 | 304 | 1 | 114 | 1.04e-28 | 107 |
| Msa0053080 | MtrunA17_Chr3g0088591 | 43.791 | 153 | 58 | 6 | 2 | 127 | 18 | 169 | 3.73e-26 | 102 |
| Msa0053080 | MtrunA17_Chr3g0088651 | 51.773 | 141 | 50 | 7 | 1 | 126 | 1 | 138 | 2.38e-25 | 100 |
| Msa0053080 | MtrunA17_Chr3g0101901 | 45.714 | 140 | 66 | 6 | 1 | 134 | 22 | 157 | 3.36e-25 | 99.8 |
| Msa0053080 | MtrunA17_Chr6g0488491 | 28.775 | 351 | 215 | 13 | 5 | 338 | 8 | 340 | 7.89e-24 | 100 |
| Msa0053080 | MtrunA17_Chr5g0435201 | 25.595 | 336 | 206 | 10 | 5 | 318 | 6 | 319 | 3.46e-20 | 90.1 |
| Msa0053080 | MtrunA17_Chr6g0449121 | 57.534 | 73 | 26 | 1 | 240 | 312 | 2 | 69 | 2.59e-17 | 75.5 |
| Msa0053080 | MtrunA17_Chr8g0351561 | 46.078 | 102 | 42 | 2 | 197 | 295 | 1 | 92 | 5.84e-17 | 77.0 |
| Msa0053080 | MtrunA17_Chr8g0349911 | 56.716 | 67 | 28 | 1 | 142 | 208 | 84 | 149 | 7.00e-17 | 78.2 |
| Msa0053080 | MtrunA17_Chr6g0457521 | 45.098 | 102 | 43 | 2 | 3 | 93 | 56 | 155 | 4.54e-15 | 72.4 |
| Msa0053080 | MtrunA17_Chr1g0146381 | 48.235 | 85 | 35 | 3 | 2 | 78 | 5 | 88 | 1.07e-14 | 68.9 |
| Msa0053080 | MtrunA17_Chr6g0457551 | 73.171 | 41 | 11 | 0 | 1 | 41 | 1 | 41 | 4.74e-14 | 65.9 |
| Msa0053080 | MtrunA17_Chr3g0143621 | 23.188 | 345 | 225 | 11 | 5 | 320 | 23 | 356 | 3.11e-13 | 70.1 |
| Msa0053080 | MtrunA17_Chr1g0146361 | 66.000 | 50 | 15 | 1 | 281 | 328 | 2 | 51 | 5.98e-12 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0053080 | AT2G17030.1 | 34.930 | 355 | 188 | 11 | 5 | 325 | 3 | 348 | 6.11e-46 | 161 |
| Msa0053080 | AT2G17036.1 | 30.812 | 357 | 184 | 13 | 5 | 318 | 3 | 339 | 5.67e-35 | 132 |
| Msa0053080 | AT2G17036.2 | 30.812 | 357 | 184 | 13 | 5 | 318 | 2 | 338 | 6.43e-35 | 132 |
| Msa0053080 | AT5G24040.1 | 27.976 | 336 | 210 | 16 | 6 | 321 | 4 | 327 | 1.72e-22 | 97.4 |
| Msa0053080 | AT5G60060.1 | 28.875 | 329 | 203 | 15 | 4 | 309 | 9 | 329 | 2.12e-21 | 94.4 |
| Msa0053080 | AT3G25750.1 | 28.395 | 324 | 185 | 12 | 1 | 307 | 1 | 294 | 5.28e-20 | 90.1 |
| Msa0053080 | AT3G25750.2 | 27.134 | 328 | 198 | 13 | 1 | 307 | 1 | 308 | 2.27e-19 | 88.2 |
| Msa0053080 | AT1G65770.1 | 27.299 | 348 | 196 | 12 | 4 | 320 | 2 | 323 | 1.47e-18 | 85.9 |
| Msa0053080 | AT2G26160.1 | 24.128 | 344 | 213 | 12 | 1 | 320 | 1 | 320 | 1.16e-14 | 74.3 |
| Msa0053080 | AT1G65740.1 | 24.930 | 357 | 203 | 13 | 5 | 320 | 3 | 335 | 1.26e-11 | 65.5 |
Find 76 sgRNAs with CRISPR-Local
Find 184 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAACTTTATGTACTTGAATT+AGG | 0.191945 | 1_2:+7487575 | Msa0053080:CDS |
| TTGATGAGAAGGAGAGTAAA+TGG | 0.206024 | 1_2:+7488038 | Msa0053080:CDS |
| AAACCAACGGAGATGAATTT+TGG | 0.212262 | 1_2:+7487738 | Msa0053080:CDS |
| TGTATCTTTGACTTGGATTA+AGG | 0.226143 | 1_2:+7488220 | Msa0053080:CDS |
| ATGGGTTGATTTGATGAGTT+TGG | 0.251492 | 1_2:+7488057 | Msa0053080:CDS |
| TTAACCACAAGTTCATATTT+AGG | 0.261634 | 1_2:-7487896 | None:intergenic |
| ATTTGATGAGTTTGGGAGAT+AGG | 0.289011 | 1_2:+7488065 | Msa0053080:CDS |
| AAATATGAACTTGTGGTTAA+TGG | 0.323243 | 1_2:+7487899 | Msa0053080:CDS |
| GAGGAGTGGGTGTAAGAGTT+TGG | 0.328183 | 1_2:-7487501 | None:intergenic |
| GTGGACATTTATGAGTGTTT+AGG | 0.334870 | 1_2:+7487968 | Msa0053080:CDS |
| CCAATTCCATCAATCATATA+AGG | 0.345857 | 1_2:-7487818 | None:intergenic |
| CGGACAATTATTGTTGGACT+TGG | 0.356140 | 1_2:+7487842 | Msa0053080:CDS |
| GTTGTTGATGGGAGATTGAT+AGG | 0.367917 | 1_2:-7487375 | None:intergenic |
| TGGAAACTTGAGGGTTAGAT+TGG | 0.369886 | 1_2:-7487348 | None:intergenic |
| ATCAGATGTAGAAGCTCCTT+TGG | 0.370393 | 1_2:-7487242 | None:intergenic |
| TTTCAACGAGACTGATTTCT+TGG | 0.370571 | 1_2:-7487717 | None:intergenic |
| CAGATTTGTGTGTTTCTAAA+GGG | 0.375553 | 1_2:+7488131 | Msa0053080:CDS |
| TTGAGGGTTAGATTGGGAAT+TGG | 0.401176 | 1_2:-7487341 | None:intergenic |
| CCTTATATGATTGATGGAAT+TGG | 0.407615 | 1_2:+7487818 | Msa0053080:CDS |
| GATGAGGAAGAAAGAGCGTT+TGG | 0.413225 | 1_2:-7487420 | None:intergenic |
| TCAGATTTGTGTGTTTCTAA+AGG | 0.427259 | 1_2:+7488130 | Msa0053080:CDS |
| TACTGATATGTCTATGTACT+TGG | 0.428125 | 1_2:+7487769 | Msa0053080:CDS |
| CGAGTTCAACGTCGAGTCGT+TGG | 0.433682 | 1_2:-7487268 | None:intergenic |
| TCAGGGTAAACATAGTCATA+TGG | 0.438455 | 1_2:-7487632 | None:intergenic |
| TTGTTGATGGGAGATTGATA+GGG | 0.442668 | 1_2:-7487374 | None:intergenic |
| GAGTTCAACGTCGAGTCGTT+GGG | 0.443077 | 1_2:-7487267 | None:intergenic |
| TGATGAGAAGGAGAGTAAAT+GGG | 0.446912 | 1_2:+7488039 | Msa0053080:CDS |
| GGGCGGCCTTATATGATTGA+TGG | 0.452306 | 1_2:+7487812 | Msa0053080:CDS |
| AACCACCACTTCAACGCCCT+TGG | 0.454393 | 1_2:+7487444 | Msa0053080:CDS |
| TGGGTTGATTTGATGAGTTT+GGG | 0.459847 | 1_2:+7488058 | Msa0053080:CDS |
| GGTTAGATTGGGAATTGGTA+AGG | 0.460418 | 1_2:-7487336 | None:intergenic |
| TGTGTTTAGGTTTGATGAGA+AGG | 0.463451 | 1_2:+7488027 | Msa0053080:CDS |
| AAATTGAGTGGTGTTGTTGA+TGG | 0.466840 | 1_2:-7487387 | None:intergenic |
| TTTGATGAGTTTGGGAGATA+GGG | 0.474756 | 1_2:+7488066 | Msa0053080:CDS |
| GATCGCATGACTTCGATGAC+TGG | 0.480649 | 1_2:+7487864 | Msa0053080:CDS |
| ATAGGGGTGTGGAAACTTGA+GGG | 0.481501 | 1_2:-7487357 | None:intergenic |
| ATTGGTCGGACAATTATTGT+TGG | 0.482444 | 1_2:+7487836 | Msa0053080:CDS |
| TCAGATGTAGAAGCTCCTTT+GGG | 0.486819 | 1_2:-7487241 | None:intergenic |
| CATCAATGGCAGAGTCAGAC+TGG | 0.493551 | 1_2:+7487210 | None:intergenic |
| TGGGAACTGTATCTTTGACT+TGG | 0.497539 | 1_2:+7488213 | Msa0053080:CDS |
| ACACCAAAATTCATCTCCGT+TGG | 0.512605 | 1_2:-7487741 | None:intergenic |
| TCCGATCAACTTGTTCCGCA+TGG | 0.522258 | 1_2:+7487303 | Msa0053080:CDS |
| AACCAAGGGCGTTGAAGTGG+TGG | 0.538102 | 1_2:-7487446 | None:intergenic |
| ATGGGAGATTGATAGGGGTG+TGG | 0.538525 | 1_2:-7487368 | None:intergenic |
| TATGAACTTGTGGTTAATGG+TGG | 0.543129 | 1_2:+7487902 | Msa0053080:CDS |
| GATAGGGGTGTGGAAACTTG+AGG | 0.545526 | 1_2:-7487358 | None:intergenic |
| AATTGAGTGGTGTTGTTGAT+GGG | 0.546505 | 1_2:-7487386 | None:intergenic |
| GGAAACTTGAGGGTTAGATT+GGG | 0.553565 | 1_2:-7487347 | None:intergenic |
| TGAGGGCGCGTTGCTGCGAG+TGG | 0.554191 | 1_2:+7487949 | Msa0053080:CDS |
| ATCAACCAAGGGCGTTGAAG+TGG | 0.559025 | 1_2:-7487449 | None:intergenic |
| ATGATTGATATGAGAGGAGT+GGG | 0.567475 | 1_2:-7487514 | None:intergenic |
| TGAACTTGTGGTTAATGGTG+GGG | 0.569319 | 1_2:+7487904 | Msa0053080:CDS |
| TGTTGATGGGAGATTGATAG+GGG | 0.579514 | 1_2:-7487373 | None:intergenic |
| GATGAGATGATTGATATGAG+AGG | 0.579863 | 1_2:-7487520 | None:intergenic |
| GAACTTGTGGTTAATGGTGG+GGG | 0.582058 | 1_2:+7487905 | Msa0053080:CDS |
| ATGAACTTGTGGTTAATGGT+GGG | 0.584883 | 1_2:+7487903 | Msa0053080:CDS |
| GAGTAATTCTGATCAACCAA+GGG | 0.589964 | 1_2:-7487460 | None:intergenic |
| GTTGAAGTGGTGGTTTGATG+AGG | 0.590656 | 1_2:-7487436 | None:intergenic |
| ACCACCTAAATATGAACTTG+TGG | 0.597935 | 1_2:+7487892 | Msa0053080:CDS |
| AGACTGGTCTTCACTCCCAA+AGG | 0.598232 | 1_2:+7487226 | Msa0053080:CDS |
| TCACTAAAATCGAGAGCGTG+AGG | 0.598776 | 1_2:-7487554 | None:intergenic |
| AGAGCGTGAGGGAAAAGAAG+AGG | 0.600055 | 1_2:-7487542 | None:intergenic |
| ACTGATATGTCTATGTACTT+GGG | 0.602971 | 1_2:+7487770 | Msa0053080:CDS |
| ACCACAAGTTCATATTTAGG+TGG | 0.605610 | 1_2:-7487893 | None:intergenic |
| TGAGTAATTCTGATCAACCA+AGG | 0.612564 | 1_2:-7487461 | None:intergenic |
| AAAATTCTTAGTGGAGAGTG+AGG | 0.612751 | 1_2:+7487931 | Msa0053080:CDS |
| CACTAAAATCGAGAGCGTGA+GGG | 0.616468 | 1_2:-7487553 | None:intergenic |
| TCAGTCTCGTTGAAAACCAA+CGG | 0.621836 | 1_2:+7487725 | Msa0053080:CDS |
| GCCATGCGGAACAAGTTGAT+CGG | 0.628441 | 1_2:-7487304 | None:intergenic |
| GGAGAGAGAGTGAAATTGAG+TGG | 0.633283 | 1_2:-7487399 | None:intergenic |
| ATATGATTGATGGAATTGGT+CGG | 0.636318 | 1_2:+7487822 | Msa0053080:CDS |
| ATAAACGTGCCAATAACAAG+AGG | 0.645995 | 1_2:-7487689 | None:intergenic |
| GATGATTGATATGAGAGGAG+TGG | 0.652451 | 1_2:-7487515 | None:intergenic |
| AAATTCTTAGTGGAGAGTGA+GGG | 0.668174 | 1_2:+7487932 | Msa0053080:CDS |
| AGAATTACTCAAAACCCTAA+CGG | 0.674771 | 1_2:+7487473 | Msa0053080:CDS |
| TAAGGAAGAAGAGCGCCATG+CGG | 0.759001 | 1_2:-7487318 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTAAGGATTAATGTGTTT+AGG | + | chr1_2:7488014-7488033 | Msa0053080:CDS | 20.0% |
| !! | AATTGTAAAAACATGCAATA+TGG | + | chr1_2:7488193-7488212 | Msa0053080:CDS | 20.0% |
| !! | ATTGTAAAAACATGCAATAT+GGG | + | chr1_2:7488194-7488213 | Msa0053080:CDS | 20.0% |
| !!! | TTTTAAGGATTAATGTGTTT+AGG | + | chr1_2:7488014-7488033 | Msa0053080:CDS | 20.0% |
| !! | AATTGTAAAAACATGCAATA+TGG | + | chr1_2:7488193-7488212 | Msa0053080:CDS | 20.0% |
| !! | ATTGTAAAAACATGCAATAT+GGG | + | chr1_2:7488194-7488213 | Msa0053080:CDS | 20.0% |
| ! | GAACTTTATGTACTTGAATT+AGG | + | chr1_2:7487575-7487594 | Msa0053080:CDS | 25.0% |
| ! | TTAACCACAAGTTCATATTT+AGG | - | chr1_2:7487899-7487918 | None:intergenic | 25.0% |
| ! | AAATATGAACTTGTGGTTAA+TGG | + | chr1_2:7487899-7487918 | Msa0053080:CDS | 25.0% |
| !!! | TGTTTAGGTTTTGATTACTT+CGG | + | chr1_2:7487983-7488002 | Msa0053080:CDS | 25.0% |
| ! | GAACTTTATGTACTTGAATT+AGG | + | chr1_2:7487575-7487594 | Msa0053080:CDS | 25.0% |
| ! | TTAACCACAAGTTCATATTT+AGG | - | chr1_2:7487899-7487918 | None:intergenic | 25.0% |
| ! | AAATATGAACTTGTGGTTAA+TGG | + | chr1_2:7487899-7487918 | Msa0053080:CDS | 25.0% |
| !!! | TGTTTAGGTTTTGATTACTT+CGG | + | chr1_2:7487983-7488002 | Msa0053080:CDS | 25.0% |
| AGAATTACTCAAAACCCTAA+CGG | + | chr1_2:7487473-7487492 | Msa0053080:CDS | 30.0% | |
| ! | GAAAAAAAGCCTCTTGTTAT+TGG | + | chr1_2:7487680-7487699 | Msa0053080:CDS | 30.0% |
| TACTGATATGTCTATGTACT+TGG | + | chr1_2:7487769-7487788 | Msa0053080:CDS | 30.0% | |
| ACTGATATGTCTATGTACTT+GGG | + | chr1_2:7487770-7487789 | Msa0053080:CDS | 30.0% | |
| CCAATTCCATCAATCATATA+AGG | - | chr1_2:7487821-7487840 | None:intergenic | 30.0% | |
| CCTTATATGATTGATGGAAT+TGG | + | chr1_2:7487818-7487837 | Msa0053080:CDS | 30.0% | |
| ATATGATTGATGGAATTGGT+CGG | + | chr1_2:7487822-7487841 | Msa0053080:CDS | 30.0% | |
| ! | ACTTCGGTAAGAATGTTTTA+AGG | + | chr1_2:7487999-7488018 | Msa0053080:CDS | 30.0% |
| ! | TCAGATTTGTGTGTTTCTAA+AGG | + | chr1_2:7488130-7488149 | Msa0053080:CDS | 30.0% |
| ! | CAGATTTGTGTGTTTCTAAA+GGG | + | chr1_2:7488131-7488150 | Msa0053080:CDS | 30.0% |
| AGAATTACTCAAAACCCTAA+CGG | + | chr1_2:7487473-7487492 | Msa0053080:CDS | 30.0% | |
| ! | GAAAAAAAGCCTCTTGTTAT+TGG | + | chr1_2:7487680-7487699 | Msa0053080:CDS | 30.0% |
| TACTGATATGTCTATGTACT+TGG | + | chr1_2:7487769-7487788 | Msa0053080:CDS | 30.0% | |
| ACTGATATGTCTATGTACTT+GGG | + | chr1_2:7487770-7487789 | Msa0053080:CDS | 30.0% | |
| CCAATTCCATCAATCATATA+AGG | - | chr1_2:7487821-7487840 | None:intergenic | 30.0% | |
| CCTTATATGATTGATGGAAT+TGG | + | chr1_2:7487818-7487837 | Msa0053080:CDS | 30.0% | |
| ATATGATTGATGGAATTGGT+CGG | + | chr1_2:7487822-7487841 | Msa0053080:CDS | 30.0% | |
| ! | ACTTCGGTAAGAATGTTTTA+AGG | + | chr1_2:7487999-7488018 | Msa0053080:CDS | 30.0% |
| ! | TCAGATTTGTGTGTTTCTAA+AGG | + | chr1_2:7488130-7488149 | Msa0053080:CDS | 30.0% |
| ! | CAGATTTGTGTGTTTCTAAA+GGG | + | chr1_2:7488131-7488150 | Msa0053080:CDS | 30.0% |
| ! | TTGTTGATGGGAGATTGATA+GGG | - | chr1_2:7487377-7487396 | None:intergenic | 35.0% |
| !! | AATTGAGTGGTGTTGTTGAT+GGG | - | chr1_2:7487389-7487408 | None:intergenic | 35.0% |
| !! | AAATTGAGTGGTGTTGTTGA+TGG | - | chr1_2:7487390-7487409 | None:intergenic | 35.0% |
| GAGTAATTCTGATCAACCAA+GGG | - | chr1_2:7487463-7487482 | None:intergenic | 35.0% | |
| TGAGTAATTCTGATCAACCA+AGG | - | chr1_2:7487464-7487483 | None:intergenic | 35.0% | |
| !!! | AGAGTTTGGTTTTACCGTTA+GGG | - | chr1_2:7487490-7487509 | None:intergenic | 35.0% |
| !!! | AAGAGTTTGGTTTTACCGTT+AGG | - | chr1_2:7487491-7487510 | None:intergenic | 35.0% |
| ATGATTGATATGAGAGGAGT+GGG | - | chr1_2:7487517-7487536 | None:intergenic | 35.0% | |
| GATGAGATGATTGATATGAG+AGG | - | chr1_2:7487523-7487542 | None:intergenic | 35.0% | |
| TCAGGGTAAACATAGTCATA+TGG | - | chr1_2:7487635-7487654 | None:intergenic | 35.0% | |
| ATAAACGTGCCAATAACAAG+AGG | - | chr1_2:7487692-7487711 | None:intergenic | 35.0% | |
| ! | TTTCAACGAGACTGATTTCT+TGG | - | chr1_2:7487720-7487739 | None:intergenic | 35.0% |
| ! | AAACCAACGGAGATGAATTT+TGG | + | chr1_2:7487738-7487757 | Msa0053080:CDS | 35.0% |
| ATTGGTCGGACAATTATTGT+TGG | + | chr1_2:7487836-7487855 | Msa0053080:CDS | 35.0% | |
| ACCACCTAAATATGAACTTG+TGG | + | chr1_2:7487892-7487911 | Msa0053080:CDS | 35.0% | |
| ACCACAAGTTCATATTTAGG+TGG | - | chr1_2:7487896-7487915 | None:intergenic | 35.0% | |
| TATGAACTTGTGGTTAATGG+TGG | + | chr1_2:7487902-7487921 | Msa0053080:CDS | 35.0% | |
| ATGAACTTGTGGTTAATGGT+GGG | + | chr1_2:7487903-7487922 | Msa0053080:CDS | 35.0% | |
| AAAATTCTTAGTGGAGAGTG+AGG | + | chr1_2:7487931-7487950 | Msa0053080:CDS | 35.0% | |
| AAATTCTTAGTGGAGAGTGA+GGG | + | chr1_2:7487932-7487951 | Msa0053080:CDS | 35.0% | |
| GTGGACATTTATGAGTGTTT+AGG | + | chr1_2:7487968-7487987 | Msa0053080:CDS | 35.0% | |
| ! | TGTGTTTAGGTTTGATGAGA+AGG | + | chr1_2:7488027-7488046 | Msa0053080:CDS | 35.0% |
| TTGATGAGAAGGAGAGTAAA+TGG | + | chr1_2:7488038-7488057 | Msa0053080:CDS | 35.0% | |
| TGATGAGAAGGAGAGTAAAT+GGG | + | chr1_2:7488039-7488058 | Msa0053080:CDS | 35.0% | |
| !! | ATGGGTTGATTTGATGAGTT+TGG | + | chr1_2:7488057-7488076 | Msa0053080:CDS | 35.0% |
| !! | TGGGTTGATTTGATGAGTTT+GGG | + | chr1_2:7488058-7488077 | Msa0053080:CDS | 35.0% |
| ATTTGATGAGTTTGGGAGAT+AGG | + | chr1_2:7488065-7488084 | Msa0053080:CDS | 35.0% | |
| TTTGATGAGTTTGGGAGATA+GGG | + | chr1_2:7488066-7488085 | Msa0053080:CDS | 35.0% | |
| !!! | GGAGATAGGGTTTTGTTTTT+GGG | + | chr1_2:7488079-7488098 | Msa0053080:CDS | 35.0% |
| !!! | GAGATAGGGTTTTGTTTTTG+GGG | + | chr1_2:7488080-7488099 | Msa0053080:CDS | 35.0% |
| ! | TTGTTGATGGGAGATTGATA+GGG | - | chr1_2:7487377-7487396 | None:intergenic | 35.0% |
| !! | AATTGAGTGGTGTTGTTGAT+GGG | - | chr1_2:7487389-7487408 | None:intergenic | 35.0% |
| !! | AAATTGAGTGGTGTTGTTGA+TGG | - | chr1_2:7487390-7487409 | None:intergenic | 35.0% |
| GAGTAATTCTGATCAACCAA+GGG | - | chr1_2:7487463-7487482 | None:intergenic | 35.0% | |
| TGAGTAATTCTGATCAACCA+AGG | - | chr1_2:7487464-7487483 | None:intergenic | 35.0% | |
| !!! | AGAGTTTGGTTTTACCGTTA+GGG | - | chr1_2:7487490-7487509 | None:intergenic | 35.0% |
| !!! | AAGAGTTTGGTTTTACCGTT+AGG | - | chr1_2:7487491-7487510 | None:intergenic | 35.0% |
| ATGATTGATATGAGAGGAGT+GGG | - | chr1_2:7487517-7487536 | None:intergenic | 35.0% | |
| GATGAGATGATTGATATGAG+AGG | - | chr1_2:7487523-7487542 | None:intergenic | 35.0% | |
| TCAGGGTAAACATAGTCATA+TGG | - | chr1_2:7487635-7487654 | None:intergenic | 35.0% | |
| ATAAACGTGCCAATAACAAG+AGG | - | chr1_2:7487692-7487711 | None:intergenic | 35.0% | |
| ! | TTTCAACGAGACTGATTTCT+TGG | - | chr1_2:7487720-7487739 | None:intergenic | 35.0% |
| ! | AAACCAACGGAGATGAATTT+TGG | + | chr1_2:7487738-7487757 | Msa0053080:CDS | 35.0% |
| ATTGGTCGGACAATTATTGT+TGG | + | chr1_2:7487836-7487855 | Msa0053080:CDS | 35.0% | |
| ACCACCTAAATATGAACTTG+TGG | + | chr1_2:7487892-7487911 | Msa0053080:CDS | 35.0% | |
| ACCACAAGTTCATATTTAGG+TGG | - | chr1_2:7487896-7487915 | None:intergenic | 35.0% | |
| TATGAACTTGTGGTTAATGG+TGG | + | chr1_2:7487902-7487921 | Msa0053080:CDS | 35.0% | |
| ATGAACTTGTGGTTAATGGT+GGG | + | chr1_2:7487903-7487922 | Msa0053080:CDS | 35.0% | |
| AAAATTCTTAGTGGAGAGTG+AGG | + | chr1_2:7487931-7487950 | Msa0053080:CDS | 35.0% | |
| AAATTCTTAGTGGAGAGTGA+GGG | + | chr1_2:7487932-7487951 | Msa0053080:CDS | 35.0% | |
| GTGGACATTTATGAGTGTTT+AGG | + | chr1_2:7487968-7487987 | Msa0053080:CDS | 35.0% | |
| ! | TGTGTTTAGGTTTGATGAGA+AGG | + | chr1_2:7488027-7488046 | Msa0053080:CDS | 35.0% |
| TTGATGAGAAGGAGAGTAAA+TGG | + | chr1_2:7488038-7488057 | Msa0053080:CDS | 35.0% | |
| TGATGAGAAGGAGAGTAAAT+GGG | + | chr1_2:7488039-7488058 | Msa0053080:CDS | 35.0% | |
| !! | ATGGGTTGATTTGATGAGTT+TGG | + | chr1_2:7488057-7488076 | Msa0053080:CDS | 35.0% |
| !! | TGGGTTGATTTGATGAGTTT+GGG | + | chr1_2:7488058-7488077 | Msa0053080:CDS | 35.0% |
| ATTTGATGAGTTTGGGAGAT+AGG | + | chr1_2:7488065-7488084 | Msa0053080:CDS | 35.0% | |
| TTTGATGAGTTTGGGAGATA+GGG | + | chr1_2:7488066-7488085 | Msa0053080:CDS | 35.0% | |
| !!! | GGAGATAGGGTTTTGTTTTT+GGG | + | chr1_2:7488079-7488098 | Msa0053080:CDS | 35.0% |
| !!! | GAGATAGGGTTTTGTTTTTG+GGG | + | chr1_2:7488080-7488099 | Msa0053080:CDS | 35.0% |
| TCAGATGTAGAAGCTCCTTT+GGG | - | chr1_2:7487244-7487263 | None:intergenic | 40.0% | |
| ATCAGATGTAGAAGCTCCTT+TGG | - | chr1_2:7487245-7487264 | None:intergenic | 40.0% | |
| GGTTAGATTGGGAATTGGTA+AGG | - | chr1_2:7487339-7487358 | None:intergenic | 40.0% | |
| TTGAGGGTTAGATTGGGAAT+TGG | - | chr1_2:7487344-7487363 | None:intergenic | 40.0% | |
| GGAAACTTGAGGGTTAGATT+GGG | - | chr1_2:7487350-7487369 | None:intergenic | 40.0% | |
| TGGAAACTTGAGGGTTAGAT+TGG | - | chr1_2:7487351-7487370 | None:intergenic | 40.0% | |
| ! | TGTTGATGGGAGATTGATAG+GGG | - | chr1_2:7487376-7487395 | None:intergenic | 40.0% |
| ! | GTTGTTGATGGGAGATTGAT+AGG | - | chr1_2:7487378-7487397 | None:intergenic | 40.0% |
| GATGATTGATATGAGAGGAG+TGG | - | chr1_2:7487518-7487537 | None:intergenic | 40.0% | |
| ! | TGACAGCAACGATCTTTTCA+GGG | - | chr1_2:7487652-7487671 | None:intergenic | 40.0% |
| TCAGTCTCGTTGAAAACCAA+CGG | + | chr1_2:7487725-7487744 | Msa0053080:CDS | 40.0% | |
| ACACCAAAATTCATCTCCGT+TGG | - | chr1_2:7487744-7487763 | None:intergenic | 40.0% | |
| ! | GAGACATCTGCGTTTTCAAA+GGG | + | chr1_2:7487792-7487811 | Msa0053080:CDS | 40.0% |
| CGGACAATTATTGTTGGACT+TGG | + | chr1_2:7487842-7487861 | Msa0053080:CDS | 40.0% | |
| TGAACTTGTGGTTAATGGTG+GGG | + | chr1_2:7487904-7487923 | Msa0053080:CDS | 40.0% | |
| TGGGGGCAAAAAATTCTTAG+TGG | + | chr1_2:7487922-7487941 | Msa0053080:CDS | 40.0% | |
| !!! | GGGAGATAGGGTTTTGTTTT+TGG | + | chr1_2:7488078-7488097 | Msa0053080:CDS | 40.0% |
| !!! | AGGGTTTTGTTTTTGGGGAA+TGG | + | chr1_2:7488085-7488104 | Msa0053080:CDS | 40.0% |
| TGGGAACTGTATCTTTGACT+TGG | + | chr1_2:7488213-7488232 | Msa0053080:CDS | 40.0% | |
| TCAGATGTAGAAGCTCCTTT+GGG | - | chr1_2:7487244-7487263 | None:intergenic | 40.0% | |
| ATCAGATGTAGAAGCTCCTT+TGG | - | chr1_2:7487245-7487264 | None:intergenic | 40.0% | |
| GGTTAGATTGGGAATTGGTA+AGG | - | chr1_2:7487339-7487358 | None:intergenic | 40.0% | |
| TTGAGGGTTAGATTGGGAAT+TGG | - | chr1_2:7487344-7487363 | None:intergenic | 40.0% | |
| GGAAACTTGAGGGTTAGATT+GGG | - | chr1_2:7487350-7487369 | None:intergenic | 40.0% | |
| TGGAAACTTGAGGGTTAGAT+TGG | - | chr1_2:7487351-7487370 | None:intergenic | 40.0% | |
| ! | TGTTGATGGGAGATTGATAG+GGG | - | chr1_2:7487376-7487395 | None:intergenic | 40.0% |
| ! | GTTGTTGATGGGAGATTGAT+AGG | - | chr1_2:7487378-7487397 | None:intergenic | 40.0% |
| GATGATTGATATGAGAGGAG+TGG | - | chr1_2:7487518-7487537 | None:intergenic | 40.0% | |
| ! | TGACAGCAACGATCTTTTCA+GGG | - | chr1_2:7487652-7487671 | None:intergenic | 40.0% |
| TCAGTCTCGTTGAAAACCAA+CGG | + | chr1_2:7487725-7487744 | Msa0053080:CDS | 40.0% | |
| ACACCAAAATTCATCTCCGT+TGG | - | chr1_2:7487744-7487763 | None:intergenic | 40.0% | |
| ! | GAGACATCTGCGTTTTCAAA+GGG | + | chr1_2:7487792-7487811 | Msa0053080:CDS | 40.0% |
| CGGACAATTATTGTTGGACT+TGG | + | chr1_2:7487842-7487861 | Msa0053080:CDS | 40.0% | |
| TGAACTTGTGGTTAATGGTG+GGG | + | chr1_2:7487904-7487923 | Msa0053080:CDS | 40.0% | |
| TGGGGGCAAAAAATTCTTAG+TGG | + | chr1_2:7487922-7487941 | Msa0053080:CDS | 40.0% | |
| !!! | GGGAGATAGGGTTTTGTTTT+TGG | + | chr1_2:7488078-7488097 | Msa0053080:CDS | 40.0% |
| !!! | AGGGTTTTGTTTTTGGGGAA+TGG | + | chr1_2:7488085-7488104 | Msa0053080:CDS | 40.0% |
| TGGGAACTGTATCTTTGACT+TGG | + | chr1_2:7488213-7488232 | Msa0053080:CDS | 40.0% | |
| ! | ATAGGGGTGTGGAAACTTGA+GGG | - | chr1_2:7487360-7487379 | None:intergenic | 45.0% |
| GGAGAGAGAGTGAAATTGAG+TGG | - | chr1_2:7487402-7487421 | None:intergenic | 45.0% | |
| !! | GATGAGGAAGAAAGAGCGTT+TGG | - | chr1_2:7487423-7487442 | None:intergenic | 45.0% |
| GTTGAAGTGGTGGTTTGATG+AGG | - | chr1_2:7487439-7487458 | None:intergenic | 45.0% | |
| ! | CACTAAAATCGAGAGCGTGA+GGG | - | chr1_2:7487556-7487575 | None:intergenic | 45.0% |
| ! | TCACTAAAATCGAGAGCGTG+AGG | - | chr1_2:7487557-7487576 | None:intergenic | 45.0% |
| ! | GTGACAGCAACGATCTTTTC+AGG | - | chr1_2:7487653-7487672 | None:intergenic | 45.0% |
| ! | GGAGACATCTGCGTTTTCAA+AGG | + | chr1_2:7487791-7487810 | Msa0053080:CDS | 45.0% |
| ! | ACATCTGCGTTTTCAAAGGG+CGG | + | chr1_2:7487795-7487814 | Msa0053080:CDS | 45.0% |
| GAACTTGTGGTTAATGGTGG+GGG | + | chr1_2:7487905-7487924 | Msa0053080:CDS | 45.0% | |
| ! | ATAGGGGTGTGGAAACTTGA+GGG | - | chr1_2:7487360-7487379 | None:intergenic | 45.0% |
| GGAGAGAGAGTGAAATTGAG+TGG | - | chr1_2:7487402-7487421 | None:intergenic | 45.0% | |
| !! | GATGAGGAAGAAAGAGCGTT+TGG | - | chr1_2:7487423-7487442 | None:intergenic | 45.0% |
| GTTGAAGTGGTGGTTTGATG+AGG | - | chr1_2:7487439-7487458 | None:intergenic | 45.0% | |
| ! | CACTAAAATCGAGAGCGTGA+GGG | - | chr1_2:7487556-7487575 | None:intergenic | 45.0% |
| ! | TCACTAAAATCGAGAGCGTG+AGG | - | chr1_2:7487557-7487576 | None:intergenic | 45.0% |
| ! | GTGACAGCAACGATCTTTTC+AGG | - | chr1_2:7487653-7487672 | None:intergenic | 45.0% |
| ! | GGAGACATCTGCGTTTTCAA+AGG | + | chr1_2:7487791-7487810 | Msa0053080:CDS | 45.0% |
| ! | ACATCTGCGTTTTCAAAGGG+CGG | + | chr1_2:7487795-7487814 | Msa0053080:CDS | 45.0% |
| GAACTTGTGGTTAATGGTGG+GGG | + | chr1_2:7487905-7487924 | Msa0053080:CDS | 45.0% | |
| !! | AGACTGGTCTTCACTCCCAA+AGG | + | chr1_2:7487226-7487245 | Msa0053080:CDS | 50.0% |
| GAGTTCAACGTCGAGTCGTT+GGG | - | chr1_2:7487270-7487289 | None:intergenic | 50.0% | |
| ! | TCCGATCAACTTGTTCCGCA+TGG | + | chr1_2:7487303-7487322 | Msa0053080:CDS | 50.0% |
| !! | GCCATGCGGAACAAGTTGAT+CGG | - | chr1_2:7487307-7487326 | None:intergenic | 50.0% |
| !! | TAAGGAAGAAGAGCGCCATG+CGG | - | chr1_2:7487321-7487340 | None:intergenic | 50.0% |
| ! | GATAGGGGTGTGGAAACTTG+AGG | - | chr1_2:7487361-7487380 | None:intergenic | 50.0% |
| ATGGGAGATTGATAGGGGTG+TGG | - | chr1_2:7487371-7487390 | None:intergenic | 50.0% | |
| !! | ATCAACCAAGGGCGTTGAAG+TGG | - | chr1_2:7487452-7487471 | None:intergenic | 50.0% |
| GAGGAGTGGGTGTAAGAGTT+TGG | - | chr1_2:7487504-7487523 | None:intergenic | 50.0% | |
| AGAGCGTGAGGGAAAAGAAG+AGG | - | chr1_2:7487545-7487564 | None:intergenic | 50.0% | |
| ! | GGGCGGCCTTATATGATTGA+TGG | + | chr1_2:7487812-7487831 | Msa0053080:CDS | 50.0% |
| GATCGCATGACTTCGATGAC+TGG | + | chr1_2:7487864-7487883 | Msa0053080:CDS | 50.0% | |
| !! | AGACTGGTCTTCACTCCCAA+AGG | + | chr1_2:7487226-7487245 | Msa0053080:CDS | 50.0% |
| GAGTTCAACGTCGAGTCGTT+GGG | - | chr1_2:7487270-7487289 | None:intergenic | 50.0% | |
| ! | TCCGATCAACTTGTTCCGCA+TGG | + | chr1_2:7487303-7487322 | Msa0053080:CDS | 50.0% |
| !! | GCCATGCGGAACAAGTTGAT+CGG | - | chr1_2:7487307-7487326 | None:intergenic | 50.0% |
| !! | TAAGGAAGAAGAGCGCCATG+CGG | - | chr1_2:7487321-7487340 | None:intergenic | 50.0% |
| ! | GATAGGGGTGTGGAAACTTG+AGG | - | chr1_2:7487361-7487380 | None:intergenic | 50.0% |
| ATGGGAGATTGATAGGGGTG+TGG | - | chr1_2:7487371-7487390 | None:intergenic | 50.0% | |
| !! | ATCAACCAAGGGCGTTGAAG+TGG | - | chr1_2:7487452-7487471 | None:intergenic | 50.0% |
| GAGGAGTGGGTGTAAGAGTT+TGG | - | chr1_2:7487504-7487523 | None:intergenic | 50.0% | |
| AGAGCGTGAGGGAAAAGAAG+AGG | - | chr1_2:7487545-7487564 | None:intergenic | 50.0% | |
| ! | GGGCGGCCTTATATGATTGA+TGG | + | chr1_2:7487812-7487831 | Msa0053080:CDS | 50.0% |
| GATCGCATGACTTCGATGAC+TGG | + | chr1_2:7487864-7487883 | Msa0053080:CDS | 50.0% | |
| CGAGTTCAACGTCGAGTCGT+TGG | - | chr1_2:7487271-7487290 | None:intergenic | 55.0% | |
| AACCACCACTTCAACGCCCT+TGG | + | chr1_2:7487444-7487463 | Msa0053080:CDS | 55.0% | |
| !! | AACCAAGGGCGTTGAAGTGG+TGG | - | chr1_2:7487449-7487468 | None:intergenic | 55.0% |
| CGAGTTCAACGTCGAGTCGT+TGG | - | chr1_2:7487271-7487290 | None:intergenic | 55.0% | |
| AACCACCACTTCAACGCCCT+TGG | + | chr1_2:7487444-7487463 | Msa0053080:CDS | 55.0% | |
| !! | AACCAAGGGCGTTGAAGTGG+TGG | - | chr1_2:7487449-7487468 | None:intergenic | 55.0% |
| ! | TGAGGGCGCGTTGCTGCGAG+TGG | + | chr1_2:7487949-7487968 | Msa0053080:CDS | 70.0% |
| ! | TGAGGGCGCGTTGCTGCGAG+TGG | + | chr1_2:7487949-7487968 | Msa0053080:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 7487215 | 7488240 | 7487215 | ID=Msa0053080;Name=Msa0053080 |
| chr1_2 | mRNA | 7487215 | 7488240 | 7487215 | ID=Msa0053080-mRNA-1;Parent=Msa0053080;Name=Msa0053080-mRNA-1;_AED=0.25;_eAED=0.25;_QI=0|-1|0|1|-1|1|1|0|341 |
| chr1_2 | exon | 7487215 | 7488240 | 7487215 | ID=Msa0053080-mRNA-1:exon:2568;Parent=Msa0053080-mRNA-1 |
| chr1_2 | CDS | 7487215 | 7488240 | 7487215 | ID=Msa0053080-mRNA-1:cds;Parent=Msa0053080-mRNA-1 |
| Gene Sequence |
| Protein sequence |
