AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1121480


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1121480 MtrunA17_Chr7g0250191 59.223 206 78 2 113 317 11 211 8.22e-80 241
Msa1121480 MtrunA17_Chr7g0250171 58.879 214 83 4 108 319 95 305 5.05e-77 238
Msa1121480 MtrunA17_Chr5g0437571 45.968 124 43 4 57 180 1 100 4.04e-27 104
Msa1121480 MtrunA17_Chr3g0114061 43.651 126 45 5 57 180 1 102 2.15e-24 97.1
Msa1121480 MtrunA17_Chr3g0106101 44.037 109 38 3 58 166 3 88 6.05e-21 88.2
Msa1121480 MtrunA17_Chr4g0043421 65.455 55 19 0 54 108 7 61 3.34e-20 86.3
Msa1121480 MtrunA17_Chr6g0449641 53.247 77 26 2 60 136 7 73 3.93e-20 85.1
Msa1121480 MtrunA17_Chr2g0311601 61.017 59 23 0 50 108 1 59 5.98e-20 85.1
Msa1121480 MtrunA17_Chr7g0227511 57.576 66 24 1 60 125 9 70 2.58e-19 83.6
Msa1121480 MtrunA17_Chr6g0449651 55.224 67 26 1 59 125 64 126 2.61e-19 84.3
Msa1121480 MtrunA17_Chr4g0058651 56.061 66 25 1 60 125 9 70 9.81e-19 82.4
Msa1121480 MtrunA17_Chr3g0117121 56.061 66 25 1 60 125 8 69 1.85e-18 82.0
Msa1121480 MtrunA17_Chr5g0402611 54.688 64 29 0 60 123 6 69 1.10e-17 82.0
Msa1121480 MtrunA17_Chr8g0353981 48.052 77 30 2 60 136 5 71 2.01e-17 79.7
Msa1121480 MtrunA17_Chr3g0129071 51.316 76 27 2 61 136 46 111 8.71e-17 78.2
Msa1121480 MtrunA17_Chr3g0115431 60.000 55 20 1 59 113 6 58 1.42e-16 77.4
Msa1121480 MtrunA17_Chr3g0097221 42.991 107 38 5 60 166 5 88 2.57e-16 77.8
Msa1121480 MtrunA17_Chr5g0438091 65.957 47 16 0 61 107 38 84 3.23e-16 75.9
Msa1121480 MtrunA17_Chr5g0432451 65.957 47 16 0 61 107 42 88 4.93e-16 76.3
Msa1121480 MtrunA17_Chr2g0326041 64.583 48 17 0 61 108 32 79 6.35e-16 72.0
Msa1121480 MtrunA17_Chr6g0452671 33.898 118 65 2 63 175 12 121 9.70e-16 74.7
Msa1121480 MtrunA17_Chr5g0444351 47.692 65 29 1 63 127 6 65 1.80e-14 69.7
Msa1121480 MtrunA17_Chr4g0030001 65.306 49 16 1 61 108 23 71 2.27e-14 70.5
Msa1121480 MtrunA17_Chr7g0260971 62.745 51 18 1 58 107 10 60 3.10e-14 70.9
Msa1121480 MtrunA17_Chr7g0225111 56.250 48 21 0 61 108 4 51 3.34e-14 68.2
Msa1121480 MtrunA17_Chr3g0113891 63.265 49 18 0 59 107 11 59 4.25e-14 69.7
Msa1121480 MtrunA17_Chr5g0437401 63.265 49 18 0 59 107 8 56 8.61e-14 68.6
Msa1121480 MtrunA17_Chr1g0184281 63.830 47 16 1 62 107 15 61 3.43e-13 67.4
Msa1121480 MtrunA17_Chr8g0351721 57.377 61 20 2 53 107 4 64 3.59e-13 67.8
Msa1121480 MtrunA17_Chr7g0261031 36.735 147 73 6 58 193 4 141 5.06e-13 67.4
Msa1121480 MtrunA17_Chr6g0452661 51.020 49 24 0 60 108 7 55 6.44e-13 67.4
Msa1121480 MtrunA17_Chr1g0200201 63.043 46 17 0 63 108 73 118 8.56e-13 67.0
Msa1121480 MtrunA17_Chr6g0452691 50.000 52 26 0 57 108 4 55 2.99e-12 64.3
Msa1121480 MtrunA17_Chr7g0245871 61.702 47 17 1 62 107 27 73 4.66e-12 65.1
Msa1121480 MtrunA17_Chr4g0059901 52.830 53 25 0 56 108 4 56 5.04e-12 65.1
Msa1121480 MtrunA17_Chr4g0040831 43.662 71 35 2 44 113 1 67 5.95e-12 63.9
Msa1121480 MtrunA17_Chr8g0374581 53.846 52 23 1 62 112 8 59 6.15e-12 64.3
Msa1121480 MtrunA17_Chr8g0351701 62.500 48 17 1 62 108 23 70 7.85e-12 64.3
Msa1121480 MtrunA17_Chr6g0460951 60.417 48 18 1 61 107 39 86 8.01e-12 63.9
Msa1121480 MtrunA17_Chr5g0435641 41.558 77 39 2 58 133 3 74 2.20e-11 62.0
Msa1121480 MtrunA17_Chr1g0184271 58.333 48 17 2 62 107 12 58 3.10e-11 62.4
Msa1121480 MtrunA17_Chr8g0342351 49.180 61 26 1 63 123 13 68 5.61e-11 62.0
Msa1121480 MtrunA17_Chr6g0460941 55.319 47 20 1 62 107 7 53 6.54e-11 58.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1121480 AT2G30130.1 41.803 122 47 4 59 180 5 102 3.65e-21 89.7
Msa1121480 AT1G31320.1 59.322 59 24 0 50 108 1 59 7.56e-20 85.5
Msa1121480 AT3G27650.1 50.649 77 28 2 60 136 37 103 3.49e-19 83.6
Msa1121480 AT5G63090.4 54.545 66 26 1 60 125 9 70 5.68e-18 80.9
Msa1121480 AT5G63090.3 54.545 66 26 1 60 125 9 70 5.68e-18 80.9
Msa1121480 AT5G63090.2 54.545 66 26 1 60 125 9 70 5.68e-18 80.9
Msa1121480 AT5G63090.1 54.545 66 26 1 60 125 9 70 5.68e-18 80.9
Msa1121480 AT1G65620.1 49.351 77 29 2 60 136 7 73 1.25e-17 80.1
Msa1121480 AT1G65620.4 49.351 77 29 2 60 136 7 73 1.25e-17 80.1
Msa1121480 AT1G65620.3 49.351 77 29 2 60 136 7 73 1.25e-17 80.1
Msa1121480 AT1G65620.5 49.351 77 29 2 60 136 7 73 1.25e-17 80.1
Msa1121480 AT1G65620.2 49.351 77 29 2 60 136 7 73 1.25e-17 80.1
Msa1121480 AT3G26660.1 65.217 46 16 0 63 108 6 51 1.35e-17 77.8
Msa1121480 AT3G26620.1 65.217 46 16 0 63 108 6 51 1.61e-17 77.8
Msa1121480 AT5G66870.1 66.667 48 16 0 61 108 6 53 2.88e-17 81.3
Msa1121480 AT1G16530.1 67.347 49 15 1 61 108 13 61 8.34e-17 77.0
Msa1121480 AT2G30340.1 44.898 98 41 3 61 155 51 138 1.00e-15 76.3
Msa1121480 AT2G30340.2 44.898 98 41 3 61 155 52 139 1.04e-15 76.3
Msa1121480 AT2G40470.2 65.957 47 16 0 61 107 19 65 1.11e-15 74.7
Msa1121480 AT2G23660.2 48.485 66 30 1 60 125 3 64 1.51e-15 76.3
Msa1121480 AT2G23660.3 48.485 66 30 1 60 125 3 64 1.51e-15 76.3
Msa1121480 AT2G23660.1 48.485 66 30 1 60 125 3 64 1.51e-15 76.3
Msa1121480 AT2G40470.1 65.957 47 16 0 61 107 44 90 2.05e-15 74.7
Msa1121480 AT1G07900.1 64.583 48 17 0 61 108 32 79 4.24e-15 72.8
Msa1121480 AT2G28500.1 64.583 48 17 0 61 108 54 101 5.61e-15 73.6
Msa1121480 AT2G42430.1 60.784 51 19 1 58 107 11 61 1.11e-13 70.1
Msa1121480 AT5G06080.1 43.243 74 36 2 61 133 6 74 2.25e-12 65.1
Msa1121480 AT2G42440.1 47.945 73 30 3 57 127 2 68 3.76e-12 65.5
Msa1121480 AT1G06280.1 39.474 76 34 2 63 137 25 89 6.88e-12 64.3
Msa1121480 AT3G50510.1 51.020 49 24 0 61 109 11 59 7.15e-12 63.9
Msa1121480 AT3G50510.2 51.020 49 24 0 61 109 11 59 7.15e-12 63.9
Msa1121480 AT3G11090.1 59.184 49 20 0 59 107 8 56 1.45e-11 62.4
Msa1121480 AT4G00210.1 58.824 51 20 1 58 107 7 57 1.49e-11 63.5
Msa1121480 AT3G03760.1 59.184 49 19 1 61 108 50 98 1.60e-11 64.3
Msa1121480 AT3G58190.1 52.459 61 21 3 62 120 11 65 4.46e-11 62.0

Find 76 sgRNAs with CRISPR-Local

Find 537 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGATTGGGTTTGCTACTTT+AGG 0.150452 7_3:-71527281 Msa1121480:CDS
GCCATAGTTCACAAGGTTTC+TGG 0.163657 7_3:-71530583 Msa1121480:CDS
TGATTGGGTTTGCTACTTTA+GGG 0.188197 7_3:-71527280 Msa1121480:CDS
ACTCCATTTGATATGCAATT+TGG 0.194428 7_3:-71527563 Msa1121480:CDS
TTTGCTACTTTAGGGGCTAT+TGG 0.197703 7_3:-71527272 Msa1121480:CDS
TTGGTGATATGTGTTATTTC+TGG 0.204948 7_3:+71527476 None:intergenic
TCCTTTATCCTTAAAGGATT+TGG 0.218857 7_3:-71527735 Msa1121480:CDS
ATACACAAGGCTTCAGCTTC+TGG 0.241826 7_3:-71527338 Msa1121480:CDS
TTGCTACTTTAGGGGCTATT+GGG 0.250741 7_3:-71527271 Msa1121480:CDS
ATGTCATAAATCCACAAATA+AGG 0.256220 7_3:+71527243 None:intergenic
TGTGAACTATGGCAATCTTT+TGG 0.277139 7_3:+71530593 None:intergenic
GCCAAATCCTTTAAGGATAA+AGG 0.279747 7_3:+71527734 None:intergenic
GCAATTGAGGTTAGTTTAGA+TGG 0.281621 7_3:-71527164 Msa1121480:CDS
AGGTGGAGATTCATATATAA+AGG 0.306418 7_3:-71527203 Msa1121480:CDS
GATATTTCTCCACAACAATA+TGG 0.315818 7_3:-71527641 Msa1121480:CDS
ATAAAGGGAAACCAAGAGTT+AGG 0.327666 7_3:-71527187 Msa1121480:CDS
CTATGTTCTGTCTTGGATGC+TGG 0.363774 7_3:-71527441 Msa1121480:CDS
CATTGAAGCTACCTCTGATT+GGG 0.372796 7_3:-71527295 Msa1121480:CDS
GGTGTTAGCCAAATCCTTTA+AGG 0.384845 7_3:+71527727 None:intergenic
CATTCTCTCATTATTTGCCT+TGG 0.385632 7_3:-71527051 Msa1121480:three_prime_UTR
ATTGGGCTTTCCCTTATTTG+TGG 0.390356 7_3:-71527254 Msa1121480:CDS
TGGATTTATGACATTGCTAA+TGG 0.396835 7_3:-71527234 Msa1121480:CDS
GGTTCATGAGAAGGGAAATA+AGG 0.398440 7_3:+71530616 None:intergenic
ACCAGAAACCTTGTGAACTA+TGG 0.401623 7_3:+71530582 None:intergenic
TGTCATAAATCCACAAATAA+GGG 0.407574 7_3:+71527244 None:intergenic
TACACAAGGCTTCAGCTTCT+GGG 0.412516 7_3:-71527337 Msa1121480:CDS
TGCTATGCTATGTTCTGTCT+TGG 0.415108 7_3:-71527448 Msa1121480:CDS
TCATTGAAGCTACCTCTGAT+TGG 0.416356 7_3:-71527296 Msa1121480:CDS
GCAGAAACATTCCCTGCTGC+TGG 0.423510 7_3:-71535138 Msa1121480:CDS
TTTCCAAATTGCATATCAAA+TGG 0.426776 7_3:+71527560 None:intergenic
ACCTCAATTGCCCTAACTCT+TGG 0.428924 7_3:+71527176 None:intergenic
CAAGGATGAAACTGATCATA+TGG 0.432699 7_3:-71527125 Msa1121480:exon
ACCAAGAGTTAGGGCAATTG+AGG 0.454810 7_3:-71527177 Msa1121480:CDS
GTTAAAGCTTTCTGTTCGAG+TGG 0.460363 7_3:+71527704 None:intergenic
GGTGGAGATTCATATATAAA+GGG 0.469550 7_3:-71527202 Msa1121480:CDS
TGCTAATGGTTTATTTGAGG+TGG 0.475509 7_3:-71527220 Msa1121480:CDS
TAAAGGGAAACCAAGAGTTA+GGG 0.488125 7_3:-71527186 Msa1121480:CDS
TGGTGATATGTGTTATTTCT+GGG 0.488602 7_3:+71527477 None:intergenic
TTAAAGCTTTCTGTTCGAGT+GGG 0.494408 7_3:+71527705 None:intergenic
CATTGCTAATGGTTTATTTG+AGG 0.495951 7_3:-71527223 Msa1121480:CDS
TGATTGTACTGGCGTGGTTG+TGG 0.505148 7_3:+71527535 None:intergenic
TCTTCTACTATCCCAGCAGC+AGG 0.517066 7_3:+71535126 None:intergenic
GCTTCAGTGTCAGTGATGGT+TGG 0.520818 7_3:+71535159 None:intergenic
AATGTAGTACTCTGAGAAGA+TGG 0.526421 7_3:-71531817 Msa1121480:intron
GATTGGGTTTGCTACTTTAG+GGG 0.529583 7_3:-71527279 Msa1121480:CDS
AGTAAAATTCCATATTGTTG+TGG 0.531249 7_3:+71527632 None:intergenic
AACATAGCATAGCATGAACT+TGG 0.533204 7_3:+71527457 None:intergenic
GAAGCCTTGTGTATCAGCTC+AGG 0.534055 7_3:+71527347 None:intergenic
CAATATTAGCAAAATGCTGC+AGG 0.538456 7_3:-71530554 Msa1121480:intron
AAGCTTATTAGTGATTGTAC+TGG 0.546070 7_3:+71527524 None:intergenic
TTCAGCTTCTGGGATTCATG+TGG 0.546243 7_3:-71527327 Msa1121480:CDS
TCGAACAGAAAGCTTTAACC+TGG 0.550713 7_3:-71527700 Msa1121480:CDS
AAAACATAGAAATGCCTCCC+AGG 0.557477 7_3:+71527682 None:intergenic
CGAACAGAAAGCTTTAACCT+GGG 0.560270 7_3:-71527699 Msa1121480:CDS
TTCTGCTTCAGTGTCAGTGA+TGG 0.563777 7_3:+71535155 None:intergenic
AGAAACTTGCATGCAGAACA+TGG 0.564885 7_3:+71530673 None:intergenic
AGCTGCTGAAACGACACCAC+AGG 0.565515 7_3:-71535103 Msa1121480:intron
CAGAAACATTCCCTGCTGCT+GGG 0.567186 7_3:-71535137 Msa1121480:CDS
TCTGGGATTCATGTGGCTTG+CGG 0.574495 7_3:-71527320 Msa1121480:CDS
ATGCACAAAAGATTGCATCT+TGG 0.575237 7_3:-71530641 Msa1121480:CDS
TGGGAATGAGTATGCATGGT+TGG 0.577451 7_3:-71527016 Msa1121480:three_prime_UTR
AAAGATTGCCATAGTTCACA+AGG 0.584770 7_3:-71530590 Msa1121480:CDS
GATGATTCTGCGAAATTGTG+AGG 0.600514 7_3:-71531781 Msa1121480:intron
AAATTGGGAATGAGTATGCA+TGG 0.602206 7_3:-71527020 Msa1121480:three_prime_UTR
ATCTGCATTCCAGGTCGTAG+TGG 0.602857 7_3:+71527413 None:intergenic
TAAAGCTTTCTGTTCGAGTG+GGG 0.608642 7_3:+71527706 None:intergenic
TCCCAATTTCAAAAGCGCCA+AGG 0.609590 7_3:+71527034 None:intergenic
TGTGGTTAATTAATTAAACA+AGG 0.629082 7_3:+71535304 None:intergenic
AAAGTAGCAAACCCAATCAG+AGG 0.633324 7_3:+71527284 None:intergenic
TATTAGTGATTGTACTGGCG+TGG 0.649304 7_3:+71527529 None:intergenic
ATTAAACAAGGTGAATACAG+AGG 0.680975 7_3:+71535316 None:intergenic
AAATTGCATATCAAATGGAG+TGG 0.682617 7_3:+71527565 None:intergenic
CTTCTACTATCCCAGCAGCA+GGG 0.684266 7_3:+71535127 None:intergenic
ACAGAGCAGAGAGGTCAGTG+TGG 0.695366 7_3:+71535286 None:intergenic
ACAGAAAGCTTTAACCTGGG+AGG 0.708767 7_3:-71527696 Msa1121480:CDS
CAGAACAGAACAGAGCAGAG+AGG 0.716614 7_3:+71535277 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATATATATATATATA+TGG - chr7_3:71532814-71532833 Msa1121480:intron 0.0%
!! ATATATATATATATATATAT+GGG - chr7_3:71532813-71532832 Msa1121480:intron 0.0%
!! TATATATATATATATATATA+GGG + chr7_3:71532814-71532833 None:intergenic 0.0%
!! ATATATATATATATATATAT+AGG + chr7_3:71532813-71532832 None:intergenic 0.0%
!! ATATATATATATATATATAT+AGG - chr7_3:71532813-71532832 Msa1121480:intron 0.0%
!! TATATATATATATATATATA+GGG - chr7_3:71532814-71532833 Msa1121480:intron 0.0%
!!! TTTTCATTCTAATATAATTA+TGG - chr7_3:71527333-71527352 Msa1121480:CDS 10.0%
!!! AAAAAAAAAAAACACTTTTT+AGG - chr7_3:71528025-71528044 Msa1121480:intron 10.0%
!! TATTTGCAAAAAAAAAAAAA+AGG - chr7_3:71528623-71528642 Msa1121480:intron 10.0%
!!! TTTTTATTAGTTAAAAACAA+TGG - chr7_3:71529137-71529156 Msa1121480:intron 10.0%
!! ATAATAAGTAAATATATTGA+AGG + chr7_3:71529577-71529596 None:intergenic 10.0%
!!! TTTTAGAATTTTTTATACTA+TGG - chr7_3:71529731-71529750 Msa1121480:intron 10.0%
!!! AAAATATTTTCTATCATTTA+CGG + chr7_3:71530349-71530368 None:intergenic 10.0%
!! AATTTAAAAACTGAATATAT+CGG - chr7_3:71530399-71530418 Msa1121480:intron 10.0%
!!! TTTTTTTTTTGAAAAAAATC+TGG - chr7_3:71530808-71530827 Msa1121480:intron 10.0%
!!! CAATAATTTAATTTTTTTTG+GGG + chr7_3:71531244-71531263 None:intergenic 10.0%
!!! CTCAATAATTTAATTTTTTT+TGG + chr7_3:71531246-71531265 None:intergenic 10.0%
!! TTATAAATTAAAGTAAAATG+TGG + chr7_3:71532114-71532133 None:intergenic 10.0%
!!! TTTACTTTAATTTATAATGA+TGG - chr7_3:71532117-71532136 Msa1121480:intron 10.0%
!!! TTACTTTAATTTATAATGAT+GGG - chr7_3:71532118-71532137 Msa1121480:intron 10.0%
!! TAAATAATGAAATCTTACAA+AGG - chr7_3:71527691-71527710 Msa1121480:CDS 15.0%
!! TTATTTAGTAGTAGATATAT+TGG + chr7_3:71527727-71527746 None:intergenic 15.0%
!! TTATACATAAAAAGCTTAAT+AGG - chr7_3:71527812-71527831 Msa1121480:intron 15.0%
!! TAAAGCCTATTTAATTAAAT+AGG + chr7_3:71527883-71527902 None:intergenic 15.0%
!!! TTTTTTTTTATAAATGTGAC+CGG + chr7_3:71528014-71528033 None:intergenic 15.0%
!! AAAGTAAGTACTTATAAATA+AGG + chr7_3:71529609-71529628 None:intergenic 15.0%
!!! ATAATAACCATTTTCTTATA+TGG + chr7_3:71529645-71529664 None:intergenic 15.0%
!! AAAAATAACAAAAGCAATTT+GGG - chr7_3:71529893-71529912 Msa1121480:intron 15.0%
!! TGTAAAAATTAAACTTTACT+TGG - chr7_3:71530287-71530306 Msa1121480:intron 15.0%
!! ATTTAAAAACTGAATATATC+GGG - chr7_3:71530400-71530419 Msa1121480:intron 15.0%
!!! GAAATTTTGTTAATATTAAG+AGG + chr7_3:71530693-71530712 None:intergenic 15.0%
!!! AAAAATCTGGAATATTTTTA+CGG - chr7_3:71530821-71530840 Msa1121480:intron 15.0%
!!! AAATATAAATTTTCAAGTTC+AGG + chr7_3:71530894-71530913 None:intergenic 15.0%
!!! CTTTAATATTTTTTGAGTTA+AGG + chr7_3:71530927-71530946 None:intergenic 15.0%
!! TATTAAAGACAAACAATTAA+CGG - chr7_3:71530939-71530958 Msa1121480:intron 15.0%
!! AATTAAATTATTGAGATTGT+AGG - chr7_3:71531251-71531270 Msa1121480:intron 15.0%
!! TACCTCTAATAATATATATT+TGG - chr7_3:71531292-71531311 Msa1121480:intron 15.0%
!!! GTTTTATAATTTTCTTTTGA+AGG - chr7_3:71531603-71531622 Msa1121480:intron 15.0%
!!! TTAATTTCTTTGATGATTAA+TGG - chr7_3:71531815-71531834 Msa1121480:intron 15.0%
!!! TAATTTCTTTGATGATTAAT+GGG - chr7_3:71531816-71531835 Msa1121480:intron 15.0%
!!! TATATAAATTTTCAAGTTCA+TGG - chr7_3:71532364-71532383 Msa1121480:intron 15.0%
!!! ATATAAATTTTCAAGTTCAT+GGG - chr7_3:71532365-71532384 Msa1121480:intron 15.0%
!!! AAGAATTGAATTTTTTTCAA+AGG - chr7_3:71532684-71532703 Msa1121480:intron 15.0%
!! ATAACCCTATATATATATAT+AGG - chr7_3:71533054-71533073 Msa1121480:intron 15.0%
!! TAACCCTATATATATATATA+GGG - chr7_3:71533055-71533074 Msa1121480:intron 15.0%
!!! ATGATATTTTTGAACAAATT+AGG - chr7_3:71533359-71533378 Msa1121480:intron 15.0%
!!! TGATATTTTTGAACAAATTA+GGG - chr7_3:71533360-71533379 Msa1121480:intron 15.0%
!!! ATCACATTCTTTATTTTTTT+AGG + chr7_3:71533681-71533700 None:intergenic 15.0%
!! TTAATATTAATATCAATGGA+TGG + chr7_3:71533805-71533824 None:intergenic 15.0%
!! TGGATTAATATTAATATCAA+TGG + chr7_3:71533809-71533828 None:intergenic 15.0%
!! TGATATTAATATTAATCCAA+CGG - chr7_3:71533810-71533829 Msa1121480:intron 15.0%
!!! ATTTTACTAATGATATGTAT+TGG - chr7_3:71534702-71534721 Msa1121480:intron 15.0%
!! TGTGGTTAATTAATTAAACA+AGG + chr7_3:71527018-71527037 None:intergenic 20.0%
!!! TGTAAAATAGGCTTTTAAAT+AGG + chr7_3:71527588-71527607 None:intergenic 20.0%
!!! TAAGCAAAAAAACACTTTTT+AGG + chr7_3:71528114-71528133 None:intergenic 20.0%
!!! TTTTTGCTTATAAATGTGAT+CGG - chr7_3:71528124-71528143 Msa1121480:intron 20.0%
!! GAGTAATAAAAAAAAGACAA+AGG - chr7_3:71528150-71528169 Msa1121480:intron 20.0%
!!! ACTTTTTGTTTTTGTTTTGA+AGG + chr7_3:71528238-71528257 None:intergenic 20.0%
!!! ACAATAACTCTTTTCATATA+GGG + chr7_3:71528846-71528865 None:intergenic 20.0%
!!! CATCTATTTTATGATAACTT+TGG - chr7_3:71529093-71529112 Msa1121480:intron 20.0%
!!! AACCATTTTGTTATATCTTT+TGG + chr7_3:71529223-71529242 None:intergenic 20.0%
!! AACAATAGAGAAATGATATT+TGG + chr7_3:71529248-71529267 None:intergenic 20.0%
!!! TTTTGTTCTAAAAAAAACGA+AGG - chr7_3:71529267-71529286 Msa1121480:intron 20.0%
!! AAAATCATGAAAATGGAATT+TGG + chr7_3:71529374-71529393 None:intergenic 20.0%
!! ATTTAGTCCATATAAGAAAA+TGG - chr7_3:71529635-71529654 Msa1121480:intron 20.0%
!! GAAAAATAACAAAAGCAATT+TGG - chr7_3:71529892-71529911 Msa1121480:intron 20.0%
!! TTCTTAAATAAAGAAGACTT+AGG - chr7_3:71529988-71530007 Msa1121480:intron 20.0%
!!! AAAGGGTTTTTTTTCTAAAA+GGG + chr7_3:71530083-71530102 None:intergenic 20.0%
!!! AAAAGGGTTTTTTTTCTAAA+AGG + chr7_3:71530084-71530103 None:intergenic 20.0%
!! TGTTAATATTAAGAGGTAAT+TGG + chr7_3:71530686-71530705 None:intergenic 20.0%
!! AGCCAAATATATATTATTAG+AGG + chr7_3:71531297-71531316 None:intergenic 20.0%
!!! TTTTAGGTGCAATATATATA+TGG - chr7_3:71531330-71531349 Msa1121480:intron 20.0%
!! TAATAAGAAAGTAGAAAGTT+AGG - chr7_3:71531401-71531420 Msa1121480:intron 20.0%
!!! TTTCTTTTGAAGGAAAAAAT+AGG - chr7_3:71531613-71531632 Msa1121480:intron 20.0%
!! AAAAGTAATTAATAGTGCAT+TGG + chr7_3:71532043-71532062 None:intergenic 20.0%
!!! TTAAATCTGGATTTTCTTTA+CGG + chr7_3:71532433-71532452 None:intergenic 20.0%
!!! AAGTTTTTTGTTAATATCAG+AGG - chr7_3:71532605-71532624 Msa1121480:intron 20.0%
!!! ATTGATGAAACTTACAATTT+TGG - chr7_3:71532632-71532651 Msa1121480:intron 20.0%
!!! TTGATGAAACTTACAATTTT+GGG - chr7_3:71532633-71532652 Msa1121480:intron 20.0%
!! CTTATGATTGAAGAATAAAT+AGG + chr7_3:71532667-71532686 None:intergenic 20.0%
!! ACACCCTATATATATATATA+GGG + chr7_3:71533061-71533080 None:intergenic 20.0%
!! TACACCCTATATATATATAT+AGG + chr7_3:71533062-71533081 None:intergenic 20.0%
!!! AGCCATTTAATTTAATCTAA+GGG + chr7_3:71533134-71533153 None:intergenic 20.0%
!!! TAGCCATTTAATTTAATCTA+AGG + chr7_3:71533135-71533154 None:intergenic 20.0%
!!! TTCTTTATTTTTTTAGGAAC+TGG + chr7_3:71533675-71533694 None:intergenic 20.0%
!!! TCAAGTTTAAAATGTGTTTT+AGG + chr7_3:71534337-71534356 None:intergenic 20.0%
! TATAATTATGGAAAAGTCAG+AGG - chr7_3:71527345-71527364 Msa1121480:CDS 25.0%
! ATAATTATGGAAAAGTCAGA+GGG - chr7_3:71527346-71527365 Msa1121480:CDS 25.0%
! ATTTATTAGAGCTAGAATGA+GGG + chr7_3:71527393-71527412 None:intergenic 25.0%
! TATTTATTAGAGCTAGAATG+AGG + chr7_3:71527394-71527413 None:intergenic 25.0%
!!! AGACCTATAATTTTTGAAGT+AGG + chr7_3:71527486-71527505 None:intergenic 25.0%
! CTAAATAACCAATCATATGA+AGG - chr7_3:71527739-71527758 Msa1121480:CDS 25.0%
! CCTATTTAATTAAATAGGTC+AGG + chr7_3:71527878-71527897 None:intergenic 25.0%
! CCTGACCTATTTAATTAAAT+AGG - chr7_3:71527875-71527894 Msa1121480:intron 25.0%
!!! TTTTAGGTTCATTGAATACA+TGG - chr7_3:71528041-71528060 Msa1121480:intron 25.0%
! CATTGAATACATGGTATATT+TGG - chr7_3:71528050-71528069 Msa1121480:intron 25.0%
!!! TTTTAGGTTCATTGAATACA+TGG + chr7_3:71528041-71528060 None:intergenic 25.0%
! TTTCGTAGATAAAATGTGTT+TGG - chr7_3:71528313-71528332 Msa1121480:intron 25.0%
!! CACAATAACTCTTTTCATAT+AGG + chr7_3:71528847-71528866 None:intergenic 25.0%
! TGACTAATCATTAAACATTC+AGG - chr7_3:71528964-71528983 Msa1121480:intron 25.0%
! GACTAATCATTAAACATTCA+GGG - chr7_3:71528965-71528984 Msa1121480:intron 25.0%
! GAGAAAAAAAAGTAAGAGAA+AGG - chr7_3:71529161-71529180 Msa1121480:intron 25.0%
! GTCCAAAAGATATAACAAAA+TGG - chr7_3:71529218-71529237 Msa1121480:intron 25.0%
!! ATAACGGAAAATCATGAAAA+TGG + chr7_3:71529381-71529400 None:intergenic 25.0%
!! ATTTTCATGATTTTCCGTTA+TGG - chr7_3:71529380-71529399 Msa1121480:intron 25.0%
! ATATCGTTAACAATCCATAA+CGG + chr7_3:71529397-71529416 None:intergenic 25.0%
! GATTGTTAACGATATTTGTT+GGG - chr7_3:71529402-71529421 Msa1121480:intron 25.0%
!! ATTGTTAACGATATTTGTTG+GGG - chr7_3:71529403-71529422 Msa1121480:intron 25.0%
! GATACATTTAGAGACTATTA+TGG + chr7_3:71529466-71529485 None:intergenic 25.0%
!!! TTTTTCTGGTTTTGTTTAGT+TGG + chr7_3:71529846-71529865 None:intergenic 25.0%
!! AACACGAAACTATATTTTTC+TGG + chr7_3:71529860-71529879 None:intergenic 25.0%
!!! AAGGGTTTTTTTTAATATGC+CGG + chr7_3:71530045-71530064 None:intergenic 25.0%
!!! TTTTCTAAAAGGGTCTAAAA+GGG + chr7_3:71530073-71530092 None:intergenic 25.0%
!!! TTTTTCTAAAAGGGTCTAAA+AGG + chr7_3:71530074-71530093 None:intergenic 25.0%
!!! TATAAATTTTCAAGTTCAGG+AGG + chr7_3:71530891-71530910 None:intergenic 25.0%
! TCTAAATGTTATTACTCAGT+CGG + chr7_3:71531120-71531139 None:intergenic 25.0%
!!! AAGCTAACAATATTTTTACG+AGG + chr7_3:71531359-71531378 None:intergenic 25.0%
! GTTTATAGAAGACAAAACAA+AGG + chr7_3:71531567-71531586 None:intergenic 25.0%
! AAACAGTAAAAAAAAGCAAG+TGG + chr7_3:71531793-71531812 None:intergenic 25.0%
! ACAAAGTAAACAACTAATCT+TGG + chr7_3:71531888-71531907 None:intergenic 25.0%
!!! AATAATTTAGGGGTACTATT+GGG + chr7_3:71532067-71532086 None:intergenic 25.0%
!!! TAATAATTTAGGGGTACTAT+TGG + chr7_3:71532068-71532087 None:intergenic 25.0%
! TGTGCATAGTAATAATTTAG+GGG + chr7_3:71532077-71532096 None:intergenic 25.0%
! GTGTGCATAGTAATAATTTA+GGG + chr7_3:71532078-71532097 None:intergenic 25.0%
! AGTGTGCATAGTAATAATTT+AGG + chr7_3:71532079-71532098 None:intergenic 25.0%
!!! AAAATAGCCTTGTTAACTAT+TGG + chr7_3:71532151-71532170 None:intergenic 25.0%
! TACTTTAAACTCTACATTCT+TGG + chr7_3:71532296-71532315 None:intergenic 25.0%
! TTTAACGTTATGCAATTTCA+TGG - chr7_3:71532574-71532593 Msa1121480:intron 25.0%
! TTAACGTTATGCAATTTCAT+GGG - chr7_3:71532575-71532594 Msa1121480:intron 25.0%
!!! AGATTGTCTTTTTTTGTAAG+AGG + chr7_3:71532743-71532762 None:intergenic 25.0%
! AGCCCTTAGATTAAATTAAA+TGG - chr7_3:71533129-71533148 Msa1121480:intron 25.0%
! TTCATTCTGCAAATAGAAAA+TGG + chr7_3:71533311-71533330 None:intergenic 25.0%
! TAAATTTGCAAAGTGAAATC+TGG - chr7_3:71533480-71533499 Msa1121480:intron 25.0%
! TAATTATAATGAGAGATGAG+AGG + chr7_3:71533848-71533867 None:intergenic 25.0%
! GCAAGTAAATAACTAAAAAG+TGG + chr7_3:71534079-71534098 None:intergenic 25.0%
! GCAAGTAAATAACTAAAAAG+TGG + chr7_3:71534079-71534098 None:intergenic 25.0%
!!! CAATGTAGGTTTTATCTAAT+AGG + chr7_3:71534401-71534420 None:intergenic 25.0%
!!! GATACCACAATTTTTGAAAA+TGG + chr7_3:71534446-71534465 None:intergenic 25.0%
!! TTTTCTTCCTTTATCCTTAA+AGG - chr7_3:71534578-71534597 Msa1121480:intron 25.0%
!! CATTTCTATGTTTTGTAGTT+GGG - chr7_3:71534646-71534665 Msa1121480:intron 25.0%
!! ATTTCTATGTTTTGTAGTTG+GGG - chr7_3:71534647-71534666 Msa1121480:intron 25.0%
! AGTAAAATTCCATATTGTTG+TGG + chr7_3:71534690-71534709 None:intergenic 25.0%
! TTTCCAAATTGCATATCAAA+TGG + chr7_3:71534762-71534781 None:intergenic 25.0%
! AGCTCAGGAAAATAAAAAAT+TGG + chr7_3:71534960-71534979 None:intergenic 25.0%
! TGTCATAAATCCACAAATAA+GGG + chr7_3:71535078-71535097 None:intergenic 25.0%
! ATGTCATAAATCCACAAATA+AGG + chr7_3:71535079-71535098 None:intergenic 25.0%
GAATCACTGAAAAACGAATA+TGG - chr7_3:71527108-71527127 Msa1121480:three_prime_UTR 30.0%
AAAAACGAATATGGAGAAAC+AGG - chr7_3:71527117-71527136 Msa1121480:three_prime_UTR 30.0%
!!! TATAATTTTTGAAGTAGGCC+AGG + chr7_3:71527481-71527500 None:intergenic 30.0%
TGGCCTACTTCAAAAATTAT+AGG - chr7_3:71527480-71527499 Msa1121480:CDS 30.0%
! TAGGCTTTTAAATAGGCTTT+CGG + chr7_3:71527581-71527600 None:intergenic 30.0%
GCTAGACTTTAGTGTAAAAT+AGG + chr7_3:71527600-71527619 None:intergenic 30.0%
ATGTAAGCCTACTACTAAAT+AGG - chr7_3:71527625-71527644 Msa1121480:CDS 30.0%
!! ATTTTGGCCTATTTAGTAGT+AGG + chr7_3:71527635-71527654 None:intergenic 30.0%
AAATAGGCCAAAATTTACGA+AGG - chr7_3:71527641-71527660 Msa1121480:CDS 30.0%
CACATATATTCATGTGCTTT+AGG + chr7_3:71527667-71527686 None:intergenic 30.0%
ACATAAAAAGCTTAATAGGC+CGG - chr7_3:71527816-71527835 Msa1121480:intron 30.0%
TAATTAAATAGGTCAGGCTA+AGG + chr7_3:71527872-71527891 None:intergenic 30.0%
! TTTTATAAATGTGACCGGTA+GGG + chr7_3:71528009-71528028 None:intergenic 30.0%
! TTTTTATAAATGTGACCGGT+AGG + chr7_3:71528010-71528029 None:intergenic 30.0%
CATTGAATACATGGTGTATT+TGG + chr7_3:71528089-71528108 None:intergenic 30.0%
GACACTAAAATAAACTCTCA+AGG + chr7_3:71528872-71528891 None:intergenic 30.0%
GAATGTTGTCCCAAAAAAAT+TGG - chr7_3:71528996-71529015 Msa1121480:intron 30.0%
!!! AATCGTCGTCCAATTTTTTT+GGG + chr7_3:71529008-71529027 None:intergenic 30.0%
AAAAAAATTGGACGACGATT+GGG - chr7_3:71529008-71529027 Msa1121480:intron 30.0%
!! TGTTCTAAAAAAAACGAAGG+AGG - chr7_3:71529270-71529289 Msa1121480:intron 30.0%
GGATTGTTAACGATATTTGT+TGG - chr7_3:71529401-71529420 Msa1121480:intron 30.0%
TGTTGGGGTAATAGTAATTT+CGG - chr7_3:71529418-71529437 Msa1121480:intron 30.0%
ATAACAAAAGCAATTTGGGA+TGG - chr7_3:71529897-71529916 Msa1121480:intron 30.0%
!! GGCATTTTTAAAAGTCTGTT+TGG - chr7_3:71530009-71530028 Msa1121480:intron 30.0%
!!! AGGGTTTTTAAGGCTTAAAA+GGG + chr7_3:71530100-71530119 None:intergenic 30.0%
!!! AAGGGTTTTTAAGGCTTAAA+AGG + chr7_3:71530101-71530120 None:intergenic 30.0%
! TAGGTCTAAAAGGGTTTTTA+AGG + chr7_3:71530110-71530129 None:intergenic 30.0%
GTATACTCAAAAGTTTGAAC+TGG - chr7_3:71530422-71530441 Msa1121480:intron 30.0%
AAAATCTAGTAACATAGACG+TGG + chr7_3:71530618-71530637 None:intergenic 30.0%
ATATATATTCACCCTCCATT+AGG + chr7_3:71531038-71531057 None:intergenic 30.0%
! GTTTAAAATCACCTTCTTAG+AGG + chr7_3:71531098-71531117 None:intergenic 30.0%
!!! AATTTTTTTTGGGGTAGCTA+TGG + chr7_3:71531235-71531254 None:intergenic 30.0%
!! CTAACAATATTTTTACGAGG+TGG + chr7_3:71531356-71531375 None:intergenic 30.0%
CATATAATGAGACTAAGAGT+GGG + chr7_3:71531537-71531556 None:intergenic 30.0%
!! CTTTTGAAGGAAAAAATAGG+TGG - chr7_3:71531616-71531635 Msa1121480:intron 30.0%
GGGATTATAAAAACAACTAG+CGG - chr7_3:71531836-71531855 Msa1121480:intron 30.0%
!! TTGTACTCATGTTTTGTTCA+AGG - chr7_3:71531917-71531936 Msa1121480:intron 30.0%
AACAAACTATTCAACCTACA+AGG + chr7_3:71531947-71531966 None:intergenic 30.0%
!! AAACGACACTCATTTTGAAA+CGG + chr7_3:71531977-71531996 None:intergenic 30.0%
TAAAGTAAAATGTGGTCCTT+TGG + chr7_3:71532106-71532125 None:intergenic 30.0%
AAATGCACCAATAGTTAACA+AGG - chr7_3:71532141-71532160 Msa1121480:intron 30.0%
TAACGTTATGCAATTTCATG+GGG - chr7_3:71532576-71532595 Msa1121480:intron 30.0%
TTCAAAGGACAAAACCTATA+TGG - chr7_3:71532699-71532718 Msa1121480:intron 30.0%
AAACCTATATGGAGTGATTT+AGG - chr7_3:71532710-71532729 Msa1121480:intron 30.0%
ACACCTTCATAAAAAGTAGT+TGG - chr7_3:71532876-71532895 Msa1121480:intron 30.0%
!!! ACACCAACTACTTTTTATGA+AGG + chr7_3:71532971-71532990 None:intergenic 30.0%
ATAAAAGACACCTTCACAAA+AGG - chr7_3:71533020-71533039 Msa1121480:intron 30.0%
CTGGCTAATTATTTGAATGT+TGG + chr7_3:71533656-71533675 None:intergenic 30.0%
!!! ACACCCATTAGTTTTTATGT+GGG - chr7_3:71534016-71534035 Msa1121480:intron 30.0%
ACTCCCACATAAAAACTAAT+GGG + chr7_3:71534022-71534041 None:intergenic 30.0%
ACCATCTAACAAAAACAAGT+GGG + chr7_3:71534170-71534189 None:intergenic 30.0%
TTATAGCAACATACACCTTA+GGG - chr7_3:71534193-71534212 Msa1121480:intron 30.0%
ACAAAAAAGTAGTGTTTCTC+GGG + chr7_3:71534294-71534313 None:intergenic 30.0%
CACAAAAAAGTAGTGTTTCT+CGG + chr7_3:71534295-71534314 None:intergenic 30.0%
!!! AAACACTACTTTTTTGTGAG+AGG - chr7_3:71534297-71534316 Msa1121480:intron 30.0%
!!! TGTGTTTTAGGTTATGCTTA+TGG + chr7_3:71534325-71534344 None:intergenic 30.0%
AACTTGATAAAATGCATTCC+AGG - chr7_3:71534350-71534369 Msa1121480:intron 30.0%
TAAATATGGGAGATCAATGT+AGG + chr7_3:71534415-71534434 None:intergenic 30.0%
! GGATCCATTTTCAAAAATTG+TGG - chr7_3:71534439-71534458 Msa1121480:intron 30.0%
! GAAAATCAATTTCTTTTGCC+TGG + chr7_3:71534563-71534582 None:intergenic 30.0%
TCCTTTATCCTTAAAGGATT+TGG - chr7_3:71534584-71534603 Msa1121480:intron 30.0%
! GCATTTCTATGTTTTGTAGT+TGG - chr7_3:71534645-71534664 Msa1121480:intron 30.0%
! TTTCTATGTTTTGTAGTTGG+GGG - chr7_3:71534648-71534667 Msa1121480:intron 30.0%
GATATTTCTCCACAACAATA+TGG - chr7_3:71534678-71534697 Msa1121480:intron 30.0%
!!! AGTTTTTTGCATAGTAACTC+AGG + chr7_3:71534731-71534750 None:intergenic 30.0%
AAATTGCATATCAAATGGAG+TGG + chr7_3:71534757-71534776 None:intergenic 30.0%
ACTCCATTTGATATGCAATT+TGG - chr7_3:71534756-71534775 Msa1121480:intron 30.0%
AAGCTTATTAGTGATTGTAC+TGG + chr7_3:71534798-71534817 None:intergenic 30.0%
!! TGGTGATATGTGTTATTTCT+GGG + chr7_3:71534845-71534864 None:intergenic 30.0%
!! TTGGTGATATGTGTTATTTC+TGG + chr7_3:71534846-71534865 None:intergenic 30.0%
TGGATTTATGACATTGCTAA+TGG - chr7_3:71535085-71535104 Msa1121480:intron 30.0%
CATTGCTAATGGTTTATTTG+AGG - chr7_3:71535096-71535115 Msa1121480:intron 30.0%
AGGTGGAGATTCATATATAA+AGG - chr7_3:71535116-71535135 Msa1121480:CDS 30.0%
GGTGGAGATTCATATATAAA+GGG - chr7_3:71535117-71535136 Msa1121480:CDS 30.0%
CGGATTGATATAATACTTGC+AGG - chr7_3:71527276-71527295 Msa1121480:CDS 35.0%
CTAATAAATAGTACTCCCTC+CGG - chr7_3:71527404-71527423 Msa1121480:CDS 35.0%
AAAAATTATAGGTCTGAGCC+TGG - chr7_3:71527491-71527510 Msa1121480:CDS 35.0%
! AGGCTTTTAAATAGGCTTTC+GGG + chr7_3:71527580-71527599 None:intergenic 35.0%
! CTTTAGGCCTTCGTAAATTT+TGG + chr7_3:71527651-71527670 None:intergenic 35.0%
AACTCAAGCCTTCATATGAT+TGG + chr7_3:71527750-71527769 None:intergenic 35.0%
CTTTATAAAAAGCTTGAGCC+TGG - chr7_3:71527898-71527917 Msa1121480:intron 35.0%
! AGCCTATTTAAAGCCTAACT+CGG + chr7_3:71527946-71527965 None:intergenic 35.0%
!! AGTTAGGCTTTAAATAGGCT+AGG - chr7_3:71527946-71527965 Msa1121480:intron 35.0%
TTTATAAATGTGACCGGTAG+GGG + chr7_3:71528008-71528027 None:intergenic 35.0%
TGCTTATAAATGTGATCGGA+AGG - chr7_3:71528128-71528147 Msa1121480:intron 35.0%
TTAGCATCATGTTAGCATCA+TGG - chr7_3:71528469-71528488 Msa1121480:intron 35.0%
ATCATGTTAGCATCATGGTA+TGG - chr7_3:71528474-71528493 Msa1121480:intron 35.0%
!! TGCACAATCATGGACTATTT+TGG - chr7_3:71528915-71528934 Msa1121480:intron 35.0%
!!! TTTTGGGACAACATTCACTT+TGG + chr7_3:71528992-71529011 None:intergenic 35.0%
!!! CAATCGTCGTCCAATTTTTT+TGG + chr7_3:71529009-71529028 None:intergenic 35.0%
CAAAAAAATTGGACGACGAT+TGG - chr7_3:71529007-71529026 Msa1121480:intron 35.0%
GTAATAGTAATTTCGGTCCT+TGG - chr7_3:71529425-71529444 Msa1121480:intron 35.0%
!! TCTTTGATAGTGCACTTTGT+TGG - chr7_3:71529501-71529520 Msa1121480:intron 35.0%
! GTATGAGGTAATAGTCGTTT+TGG + chr7_3:71529782-71529801 None:intergenic 35.0%
! AAGCAATTTGGGATGGAAAT+AGG - chr7_3:71529904-71529923 Msa1121480:intron 35.0%
TCTGTTTGGCTAAAATGATC+CGG - chr7_3:71530023-71530042 Msa1121480:intron 35.0%
CTTAAATATGCCAGCTTGAT+AGG + chr7_3:71530129-71530148 None:intergenic 35.0%
ACTGCAATAATTTGACATCC+TGG - chr7_3:71530469-71530488 Msa1121480:intron 35.0%
! AATGTAGTACTCTGAGAAGA+TGG - chr7_3:71530502-71530521 Msa1121480:intron 35.0%
GCGAAACTTACAATTTCGAA+AGG + chr7_3:71530664-71530683 None:intergenic 35.0%
AAAATTTACCACCTGTGACA+TGG + chr7_3:71530781-71530800 None:intergenic 35.0%
CACATAAACGCAAAATTCAG+AGG + chr7_3:71530861-71530880 None:intergenic 35.0%
GAAAATTCATGCCTAATGGA+GGG - chr7_3:71531024-71531043 Msa1121480:intron 35.0%
TAGAGGTAATCAAACAGTCA+AGG + chr7_3:71531081-71531100 None:intergenic 35.0%
! CTGTTTGATTACCTCTAAGA+AGG - chr7_3:71531084-71531103 Msa1121480:intron 35.0%
CTGCACATATATGTTCAGAA+GGG + chr7_3:71531183-71531202 None:intergenic 35.0%
CTTCTGAACATATATGTGCA+GGG - chr7_3:71531182-71531201 Msa1121480:intron 35.0%
TTCTGAACATATATGTGCAG+GGG - chr7_3:71531183-71531202 Msa1121480:intron 35.0%
TTGCACCTAAAATCGAACTT+GGG + chr7_3:71531322-71531341 None:intergenic 35.0%
ATTGCACCTAAAATCGAACT+TGG + chr7_3:71531323-71531342 None:intergenic 35.0%
TTATGCACTCACATATACAG+CGG + chr7_3:71531384-71531403 None:intergenic 35.0%
GTGTAATGTCTATTTAGTGC+TGG + chr7_3:71531513-71531532 None:intergenic 35.0%
GCATATAATGAGACTAAGAG+TGG + chr7_3:71531538-71531557 None:intergenic 35.0%
ATGCACAAAAGATTGCATCT+TGG - chr7_3:71531678-71531697 Msa1121480:intron 35.0%
! TGAACTATGGCAATCTTTTG+GGG + chr7_3:71531727-71531746 None:intergenic 35.0%
! GTGAACTATGGCAATCTTTT+GGG + chr7_3:71531728-71531747 None:intergenic 35.0%
! TGTGAACTATGGCAATCTTT+TGG + chr7_3:71531729-71531748 None:intergenic 35.0%
AAAGATTGCCATAGTTCACA+AGG - chr7_3:71531729-71531748 Msa1121480:intron 35.0%
CAATATTAGCAAAATGCTGC+AGG - chr7_3:71531765-71531784 Msa1121480:intron 35.0%
GAGGGAGTAGTAAAATACAT+GGG - chr7_3:71532250-71532269 Msa1121480:intron 35.0%
CACATAAGTGCAAAACTTCA+GGG - chr7_3:71532392-71532411 Msa1121480:intron 35.0%
ACATAAGTGCAAAACTTCAG+GGG - chr7_3:71532393-71532412 Msa1121480:intron 35.0%
AAAAAATACCACATGTGACG+TGG - chr7_3:71532459-71532478 Msa1121480:intron 35.0%
TGACTAACAGAGGAATTTGA+CGG - chr7_3:71532538-71532557 Msa1121480:intron 35.0%
ACACCTAAATCACTCCATAT+AGG + chr7_3:71532716-71532735 None:intergenic 35.0%
CACCTTCATAAAAAGTAGTG+TGG - chr7_3:71532877-71532896 Msa1121480:intron 35.0%
!!! CACCACACTACTTTTTATGA+AGG + chr7_3:71532882-71532901 None:intergenic 35.0%
! TTTTATCAAGTCACACCTCA+AGG - chr7_3:71532904-71532923 Msa1121480:intron 35.0%
AAAGTGAAAATCACACCTTG+AGG + chr7_3:71532922-71532941 None:intergenic 35.0%
! ATAGAAGACACCTTTTGTGA+AGG + chr7_3:71533033-71533052 None:intergenic 35.0%
TATAGGGTGTATCAAATGAG+AGG - chr7_3:71533071-71533090 Msa1121480:intron 35.0%
TGTTATAATGAGAGGATGAG+AGG - chr7_3:71533096-71533115 Msa1121480:intron 35.0%
AGAGGATGAGAGGATTTAAT+AGG - chr7_3:71533106-71533125 Msa1121480:intron 35.0%
AGATGTGAGTGTACAATACA+GGG + chr7_3:71533193-71533212 None:intergenic 35.0%
AAGATGTGAGTGTACAATAC+AGG + chr7_3:71533194-71533213 None:intergenic 35.0%
! CATTACACAAGTGGTGATTT+TGG + chr7_3:71533255-71533274 None:intergenic 35.0%
TCAAATTGCTTCAACATCGT+AGG + chr7_3:71533395-71533414 None:intergenic 35.0%
!!! CACACCCATTAGTTTTTATG+TGG - chr7_3:71534015-71534034 Msa1121480:intron 35.0%
CACTCCCACATAAAAACTAA+TGG + chr7_3:71534023-71534042 None:intergenic 35.0%
! TTTTAGCAAAGCTACACCTT+AGG - chr7_3:71534043-71534062 Msa1121480:intron 35.0%
TTTAGCAAAGCTACACCTTA+GGG - chr7_3:71534044-71534063 Msa1121480:intron 35.0%
AAGTGGTTAATTACACCCTA+AGG + chr7_3:71534062-71534081 None:intergenic 35.0%
ACTCCCACATAAAAACTAGT+GGG - chr7_3:71534105-71534124 Msa1121480:intron 35.0%
!!! ACACCCACTAGTTTTTATGT+GGG + chr7_3:71534111-71534130 None:intergenic 35.0%
TGTGTTCTAGCAAATCCTAT+AGG + chr7_3:71534147-71534166 None:intergenic 35.0%
!!! ACCCACTTGTTTTTGTTAGA+TGG - chr7_3:71534166-71534185 Msa1121480:intron 35.0%
CACCATCTAACAAAAACAAG+TGG + chr7_3:71534171-71534190 None:intergenic 35.0%
GTTATAGCAACATACACCTT+AGG - chr7_3:71534192-71534211 Msa1121480:intron 35.0%
AAGTGGTTAAATACACCCTA+AGG + chr7_3:71534211-71534230 None:intergenic 35.0%
GTGTTAACATTTCTCTATCC+TGG + chr7_3:71534371-71534390 None:intergenic 35.0%
ATTGATCTCCCATATTTACG+TGG - chr7_3:71534417-71534436 Msa1121480:intron 35.0%
TTGATCTCCCATATTTACGT+GGG - chr7_3:71534418-71534437 Msa1121480:intron 35.0%
AATGGATCCCACGTAAATAT+GGG + chr7_3:71534428-71534447 None:intergenic 35.0%
AAATGGATCCCACGTAAATA+TGG + chr7_3:71534429-71534448 None:intergenic 35.0%
! TTTCTTTTGCCTGGAGAAAA+GGG + chr7_3:71534554-71534573 None:intergenic 35.0%
! ATTTCTTTTGCCTGGAGAAA+AGG + chr7_3:71534555-71534574 None:intergenic 35.0%
! GCCAAATCCTTTAAGGATAA+AGG + chr7_3:71534588-71534607 None:intergenic 35.0%
TTAAAGCTTTCTGTTCGAGT+GGG + chr7_3:71534617-71534636 None:intergenic 35.0%
AACATAGCATAGCATGAACT+TGG + chr7_3:71534865-71534884 None:intergenic 35.0%
! ACCTGGAATGCAGATATTTT+TGG - chr7_3:71534914-71534933 Msa1121480:intron 35.0%
ACCAAAAATATCTGCATTCC+AGG + chr7_3:71534918-71534937 None:intergenic 35.0%
!! TGATTGGGTTTGCTACTTTA+GGG - chr7_3:71535039-71535058 Msa1121480:intron 35.0%
TGCTAATGGTTTATTTGAGG+TGG - chr7_3:71535099-71535118 Msa1121480:intron 35.0%
ATAAAGGGAAACCAAGAGTT+AGG - chr7_3:71535132-71535151 Msa1121480:CDS 35.0%
TAAAGGGAAACCAAGAGTTA+GGG - chr7_3:71535133-71535152 Msa1121480:CDS 35.0%
!! GCAATTGAGGTTAGTTTAGA+TGG - chr7_3:71535155-71535174 Msa1121480:CDS 35.0%
!! GGTTTGTCTGAGATTTTACA+AGG - chr7_3:71535176-71535195 Msa1121480:CDS 35.0%
CAAGGATGAAACTGATCATA+TGG - chr7_3:71535194-71535213 Msa1121480:CDS 35.0%
CATTCTCTCATTATTTGCCT+TGG - chr7_3:71535268-71535287 Msa1121480:five_prime_UTR 35.0%
AAATTGGGAATGAGTATGCA+TGG - chr7_3:71535299-71535318 Msa1121480:five_prime_UTR 35.0%
TAAGAGCAGACAAAGGAACA+AGG + chr7_3:71527256-71527275 None:intergenic 40.0%
TGTTCCTTTGTCTGCTCTTA+CGG - chr7_3:71527256-71527275 Msa1121480:CDS 40.0%
!! TTGAACCTATGACGGGTAAT+AGG + chr7_3:71527517-71527536 None:intergenic 40.0%
CTCGAAATTGAACCTATGAC+GGG + chr7_3:71527524-71527543 None:intergenic 40.0%
CCTCGAAATTGAACCTATGA+CGG + chr7_3:71527525-71527544 None:intergenic 40.0%
GCTTCATCAGGCCTTTAAAT+AGG + chr7_3:71527558-71527577 None:intergenic 40.0%
AAAAAGCCTATTAAGCCCGT+CGG + chr7_3:71527843-71527862 None:intergenic 40.0%
! GCCTTGTTAATAAACGAGCT+GGG - chr7_3:71527920-71527939 Msa1121480:intron 40.0%
CTTTAAATAGGCTAGGCCAT+AGG - chr7_3:71527953-71527972 Msa1121480:intron 40.0%
GCTAACATGATGCTAAACGT+GGG + chr7_3:71528465-71528484 None:intergenic 40.0%
TGCTAACATGATGCTAAACG+TGG + chr7_3:71528466-71528485 None:intergenic 40.0%
ACTAACAGAGTGCACAATCA+TGG - chr7_3:71528905-71528924 Msa1121480:intron 40.0%
GGTTACACGTTATACATCCA+AGG + chr7_3:71529445-71529464 None:intergenic 40.0%
TTGTTGTCGTAGCAAGTATG+AGG + chr7_3:71529797-71529816 None:intergenic 40.0%
GGTCATATATCCCTATAGAC+CGG + chr7_3:71529935-71529954 None:intergenic 40.0%
GGGTCTAAAAGGGTCTAAAA+GGG + chr7_3:71530063-71530082 None:intergenic 40.0%
AGGGTCTAAAAGGGTCTAAA+AGG + chr7_3:71530064-71530083 None:intergenic 40.0%
CCAGCTTGATAGGTCTAAAA+GGG + chr7_3:71530119-71530138 None:intergenic 40.0%
! ACTACATTTTGCATAGCACC+AGG + chr7_3:71530490-71530509 None:intergenic 40.0%
GATGATTCTGCGAAATTGTG+AGG - chr7_3:71530538-71530557 Msa1121480:intron 40.0%
! TAGGCATGAATTTTCCACCA+TGG + chr7_3:71531019-71531038 None:intergenic 40.0%
GGTGGAAAATTCATGCCTAA+TGG - chr7_3:71531020-71531039 Msa1121480:intron 40.0%
GGAAAATTCATGCCTAATGG+AGG - chr7_3:71531023-71531042 Msa1121480:intron 40.0%
CAGCTAATCTGCTACAATCA+TGG - chr7_3:71531141-71531160 Msa1121480:intron 40.0%
CCTGCACATATATGTTCAGA+AGG + chr7_3:71531184-71531203 None:intergenic 40.0%
CCTTCTGAACATATATGTGC+AGG - chr7_3:71531181-71531200 Msa1121480:intron 40.0%
GCGAATGCTTGTACAATCAA+GGG - chr7_3:71531205-71531224 Msa1121480:intron 40.0%
CGAATGCTTGTACAATCAAG+GGG - chr7_3:71531206-71531225 Msa1121480:intron 40.0%
TGCACCTAAAATCGAACTTG+GGG + chr7_3:71531321-71531340 None:intergenic 40.0%
CACGGTTTGTATCTTCAGAT+GGG + chr7_3:71531446-71531465 None:intergenic 40.0%
TGCTGGAGTGAATCTTTATG+GGG + chr7_3:71531496-71531515 None:intergenic 40.0%
GTGCTGGAGTGAATCTTTAT+GGG + chr7_3:71531497-71531516 None:intergenic 40.0%
! AGTGCTGGAGTGAATCTTTA+TGG + chr7_3:71531498-71531517 None:intergenic 40.0%
AGAAACTTGCATGCAGAACA+TGG + chr7_3:71531649-71531668 None:intergenic 40.0%
GGTTCATGAGAAGGGAAATA+AGG + chr7_3:71531706-71531725 None:intergenic 40.0%
!!! TCTTTTGGGGTTCATGAGAA+GGG + chr7_3:71531714-71531733 None:intergenic 40.0%
!!! ATCTTTTGGGGTTCATGAGA+AGG + chr7_3:71531715-71531734 None:intergenic 40.0%
ACCAGAAACCTTGTGAACTA+TGG + chr7_3:71531740-71531759 None:intergenic 40.0%
TTGTTCAAGGTACACCTTGT+AGG - chr7_3:71531930-71531949 Msa1121480:intron 40.0%
!!! GACACTCATTTTGAAACGGA+TGG + chr7_3:71531973-71531992 None:intergenic 40.0%
ACTATGCACACTACTTCCAA+AGG - chr7_3:71532087-71532106 Msa1121480:intron 40.0%
ACCTAAAACGACACTCGAAA+CGG - chr7_3:71532228-71532247 Msa1121480:intron 40.0%
GGAGGGAGTAGTAAAATACA+TGG - chr7_3:71532249-71532268 Msa1121480:intron 40.0%
GCACATAAGTGCAAAACTTC+AGG - chr7_3:71532391-71532410 Msa1121480:intron 40.0%
CATAAGTGCAAAACTTCAGG+GGG - chr7_3:71532394-71532413 Msa1121480:intron 40.0%
GTGACATTTGACTGTTTACG+TGG + chr7_3:71532511-71532530 None:intergenic 40.0%
! CACGTTATGTTGACTAACAG+AGG - chr7_3:71532528-71532547 Msa1121480:intron 40.0%
!! GAGAGGAGTGTTATAATGAG+AGG - chr7_3:71533088-71533107 Msa1121480:intron 40.0%
! TTTTGGTATCTGGATGATGC+AGG + chr7_3:71533238-71533257 None:intergenic 40.0%
!! CAAGTGGTGATTTTGGTATC+TGG + chr7_3:71533248-71533267 None:intergenic 40.0%
AGCTGCAATCATTACACAAG+TGG + chr7_3:71533264-71533283 None:intergenic 40.0%
GAAGAACACAAACGAGATGA+AGG + chr7_3:71533445-71533464 None:intergenic 40.0%
TTGTGTTCTTCATCGTTCGA+TGG - chr7_3:71533454-71533473 Msa1121480:intron 40.0%
TCGTCGTTTAGTGTTAGATC+TGG - chr7_3:71533557-71533576 Msa1121480:intron 40.0%
!! AGATCTGGTAGCTTTGTCTT+CGG - chr7_3:71533572-71533591 Msa1121480:intron 40.0%
CTTCGGTGGTTGTAATTTCT+TGG - chr7_3:71533589-71533608 Msa1121480:intron 40.0%
TATAGGGCATATCAAGTGAG+AGG + chr7_3:71533873-71533892 None:intergenic 40.0%
CACTCCCACATAAAAACTAG+TGG - chr7_3:71534104-71534123 Msa1121480:intron 40.0%
!!! CACACCCACTAGTTTTTATG+TGG + chr7_3:71534112-71534131 None:intergenic 40.0%
GTGTTCTAGCAAATGCCTAT+AGG - chr7_3:71534129-71534148 Msa1121480:intron 40.0%
ACTCCCACATGAAAACTAGT+GGG - chr7_3:71534254-71534273 Msa1121480:intron 40.0%
!!! ACACCCACTAGTTTTCATGT+GGG + chr7_3:71534260-71534279 None:intergenic 40.0%
!! TCTATTTCTCCCTTTTCTCC+AGG - chr7_3:71534542-71534561 Msa1121480:intron 40.0%
GGTGTTAGCCAAATCCTTTA+AGG + chr7_3:71534595-71534614 None:intergenic 40.0%
TAAAGCTTTCTGTTCGAGTG+GGG + chr7_3:71534616-71534635 None:intergenic 40.0%
GTTAAAGCTTTCTGTTCGAG+TGG + chr7_3:71534618-71534637 None:intergenic 40.0%
! TCGAACAGAAAGCTTTAACC+TGG - chr7_3:71534619-71534638 Msa1121480:intron 40.0%
! CGAACAGAAAGCTTTAACCT+GGG - chr7_3:71534620-71534639 Msa1121480:intron 40.0%
AAAACATAGAAATGCCTCCC+AGG + chr7_3:71534640-71534659 None:intergenic 40.0%
! TATTAGTGATTGTACTGGCG+TGG + chr7_3:71534793-71534812 None:intergenic 40.0%
TGCTATGCTATGTTCTGTCT+TGG - chr7_3:71534871-71534890 Msa1121480:intron 40.0%
! TTTTCCTGAGCTGATACACA+AGG - chr7_3:71534968-71534987 Msa1121480:intron 40.0%
TCATTGAAGCTACCTCTGAT+TGG - chr7_3:71535023-71535042 Msa1121480:intron 40.0%
CATTGAAGCTACCTCTGATT+GGG - chr7_3:71535024-71535043 Msa1121480:intron 40.0%
AAAGTAGCAAACCCAATCAG+AGG + chr7_3:71535038-71535057 None:intergenic 40.0%
!! CTGATTGGGTTTGCTACTTT+AGG - chr7_3:71535038-71535057 Msa1121480:intron 40.0%
!! GATTGGGTTTGCTACTTTAG+GGG - chr7_3:71535040-71535059 Msa1121480:intron 40.0%
!! TTTGCTACTTTAGGGGCTAT+TGG - chr7_3:71535047-71535066 Msa1121480:intron 40.0%
!! TTGCTACTTTAGGGGCTATT+GGG - chr7_3:71535048-71535067 Msa1121480:intron 40.0%
! ATTGGGCTTTCCCTTATTTG+TGG - chr7_3:71535065-71535084 Msa1121480:intron 40.0%
TTCTGCTTCAGTGTCAGTGA+TGG + chr7_3:71527167-71527186 None:intergenic 45.0%
CAATCCGTAAGAGCAGACAA+AGG + chr7_3:71527263-71527282 None:intergenic 45.0%
GGCAGATGTTGTGTGGAATT+CGG - chr7_3:71527367-71527386 Msa1121480:CDS 45.0%
!!! TTTTGAAGTAGGCCAGGCTT+GGG + chr7_3:71527475-71527494 None:intergenic 45.0%
!!! TTTTTGAAGTAGGCCAGGCT+TGG + chr7_3:71527476-71527495 None:intergenic 45.0%
CCGTCATAGGTTCAATTTCG+AGG - chr7_3:71527522-71527541 Msa1121480:CDS 45.0%
ATAGGTTCAATTTCGAGGCC+TGG - chr7_3:71527527-71527546 Msa1121480:CDS 45.0%
ATCAGGCCTTTAAATAGGCC+AGG + chr7_3:71527553-71527572 None:intergenic 45.0%
AAAAGCCTATTAAGCCCGTC+GGG + chr7_3:71527842-71527861 None:intergenic 45.0%
GCTCGTTTATTAACAAGGCC+AGG + chr7_3:71527919-71527938 None:intergenic 45.0%
!! GGCCTTGTTAATAAACGAGC+TGG - chr7_3:71527919-71527938 Msa1121480:intron 45.0%
GCCCAGCTCGTTTATTAACA+AGG + chr7_3:71527924-71527943 None:intergenic 45.0%
!! GGCCGAGTTAGGCTTTAAAT+AGG - chr7_3:71527941-71527960 Msa1121480:intron 45.0%
AAAGACAAAGGCTGTGACTG+AGG - chr7_3:71528162-71528181 Msa1121480:intron 45.0%
TACCTGCGTCATCTCAAGAT+GGG + chr7_3:71528197-71528216 None:intergenic 45.0%
ATACCTGCGTCATCTCAAGA+TGG + chr7_3:71528198-71528217 None:intergenic 45.0%
TGCTAAACGTGGGCAGTTAT+GGG + chr7_3:71528455-71528474 None:intergenic 45.0%
ATGCTAAACGTGGGCAGTTA+TGG + chr7_3:71528456-71528475 None:intergenic 45.0%
AACATCGTGTGAGTACGAGA+GGG - chr7_3:71529189-71529208 Msa1121480:intron 45.0%
AATAGGTCAGACCGGTCTAT+AGG - chr7_3:71529921-71529940 Msa1121480:intron 45.0%
ATAGGTCAGACCGGTCTATA+GGG - chr7_3:71529922-71529941 Msa1121480:intron 45.0%
TAGCCTACGAATAAGCAGGT+CGG - chr7_3:71529955-71529974 Msa1121480:intron 45.0%
AATCCGACCTGCTTATTCGT+AGG + chr7_3:71529961-71529980 None:intergenic 45.0%
! CCCTTTTAGACCTATCAAGC+TGG - chr7_3:71530116-71530135 Msa1121480:intron 45.0%
GCCAGCTTGATAGGTCTAAA+AGG + chr7_3:71530120-71530139 None:intergenic 45.0%
ACCATGGCTTAGTGTTTAGG+GGG + chr7_3:71531003-71531022 None:intergenic 45.0%
CACCATGGCTTAGTGTTTAG+GGG + chr7_3:71531004-71531023 None:intergenic 45.0%
CCACCATGGCTTAGTGTTTA+GGG + chr7_3:71531005-71531024 None:intergenic 45.0%
TCCACCATGGCTTAGTGTTT+AGG + chr7_3:71531006-71531025 None:intergenic 45.0%
GGCGAATGCTTGTACAATCA+AGG - chr7_3:71531204-71531223 Msa1121480:intron 45.0%
! GCTACCCCAAGTTCGATTTT+AGG - chr7_3:71531314-71531333 Msa1121480:intron 45.0%
GCACGGTTTGTATCTTCAGA+TGG + chr7_3:71531447-71531466 None:intergenic 45.0%
AAGAGAAGGAAGTCGTAGCA+CGG + chr7_3:71531464-71531483 None:intergenic 45.0%
GCCATAGTTCACAAGGTTTC+TGG - chr7_3:71531736-71531755 Msa1121480:intron 45.0%
!!! TCCGTTTCGAGTGTCGTTTT+AGG + chr7_3:71532232-71532251 None:intergenic 45.0%
TAAAACGACACTCGAAACGG+AGG - chr7_3:71532231-71532250 Msa1121480:intron 45.0%
AAAACGACACTCGAAACGGA+GGG - chr7_3:71532232-71532251 Msa1121480:intron 45.0%
ACAGAGGAATTTGACGGAAG+AGG - chr7_3:71532544-71532563 Msa1121480:intron 45.0%
TGTGAGTGTACAATACAGGG+TGG + chr7_3:71533190-71533209 None:intergenic 45.0%
TGTCTCTATGTCGTTCGATC+TGG - chr7_3:71533504-71533523 Msa1121480:intron 45.0%
TGGTTGTCGCCAATGTCTTT+CGG - chr7_3:71533524-71533543 Msa1121480:intron 45.0%
GAACAACCACCGAAAGACAT+TGG + chr7_3:71533536-71533555 None:intergenic 45.0%
! ATCTCTTTTATCTCCCTCCC+TGG + chr7_3:71533747-71533766 None:intergenic 45.0%
CACTCCCACATGAAAACTAG+TGG - chr7_3:71534253-71534272 Msa1121480:intron 45.0%
!!! CACACCCACTAGTTTTCATG+TGG + chr7_3:71534261-71534280 None:intergenic 45.0%
! ACAGAAAGCTTTAACCTGGG+AGG - chr7_3:71534623-71534642 Msa1121480:intron 45.0%
CTATGTTCTGTCTTGGATGC+TGG - chr7_3:71534878-71534897 Msa1121480:intron 45.0%
ATACACAAGGCTTCAGCTTC+TGG - chr7_3:71534981-71535000 Msa1121480:intron 45.0%
TACACAAGGCTTCAGCTTCT+GGG - chr7_3:71534982-71535001 Msa1121480:intron 45.0%
!! TTCAGCTTCTGGGATTCATG+TGG - chr7_3:71534992-71535011 Msa1121480:intron 45.0%
ACCAAGAGTTAGGGCAATTG+AGG - chr7_3:71535142-71535161 Msa1121480:CDS 45.0%
ACCTCAATTGCCCTAACTCT+TGG + chr7_3:71535146-71535165 None:intergenic 45.0%
!!! TGCCTTGGCGCTTTTGAAAT+TGG - chr7_3:71535283-71535302 Msa1121480:five_prime_UTR 45.0%
!!! GCCTTGGCGCTTTTGAAATT+GGG - chr7_3:71535284-71535303 Msa1121480:five_prime_UTR 45.0%
!! TCCCAATTTCAAAAGCGCCA+AGG + chr7_3:71535288-71535307 None:intergenic 45.0%
TGGGAATGAGTATGCATGGT+TGG - chr7_3:71535303-71535322 Msa1121480:five_prime_UTR 45.0%
!! AATTAATAAAAAGTTAAAAT+TGG + chr7_3:71528402-71528421 None:intergenic 5.0%
!! ATTTATTGTTATATTATATT+TGG - chr7_3:71530166-71530185 Msa1121480:intron 5.0%
!!! TCAATAATTTAATTTTTTTT+GGG + chr7_3:71531245-71531264 None:intergenic 5.0%
!!! ATTTTTTTTTTTTTTAAATC+TGG + chr7_3:71532446-71532465 None:intergenic 5.0%
!! ATATATATATATATATATAG+GGG - chr7_3:71533982-71534001 Msa1121480:intron 5.0%
CAGAACAGAACAGAGCAGAG+AGG + chr7_3:71527045-71527064 None:intergenic 50.0%
GCTTCAGTGTCAGTGATGGT+TGG + chr7_3:71527163-71527182 None:intergenic 50.0%
CAGAAACATTCCCTGCTGCT+GGG - chr7_3:71527182-71527201 Msa1121480:CDS 50.0%
CTTCTACTATCCCAGCAGCA+GGG + chr7_3:71527195-71527214 None:intergenic 50.0%
TCTTCTACTATCCCAGCAGC+AGG + chr7_3:71527196-71527215 None:intergenic 50.0%
GAGCAGACAAAGGAACAAGG+AGG + chr7_3:71527253-71527272 None:intergenic 50.0%
CTATTTCCACCCCTAGTGAC+CGG + chr7_3:71527426-71527445 None:intergenic 50.0%
ACTAGGGGTGGAAATAGGCT+AGG - chr7_3:71527429-71527448 Msa1121480:CDS 50.0%
ATAGGCTTTCGGGCTTCATC+AGG + chr7_3:71527570-71527589 None:intergenic 50.0%
TAAATGTGACCGGTAGGGGT+GGG + chr7_3:71528004-71528023 None:intergenic 50.0%
ATAAATGTGACCGGTAGGGG+TGG + chr7_3:71528005-71528024 None:intergenic 50.0%
GAACATCGTGTGAGTACGAG+AGG - chr7_3:71529188-71529207 Msa1121480:intron 50.0%
ACATCGTGTGAGTACGAGAG+GGG - chr7_3:71529190-71529209 Msa1121480:intron 50.0%
GGGATGGAAATAGGTCAGAC+CGG - chr7_3:71529913-71529932 Msa1121480:intron 50.0%
GACCTAGCCTACGAATAAGC+AGG - chr7_3:71529951-71529970 Msa1121480:intron 50.0%
GACCTGCTTATTCGTAGGCT+AGG + chr7_3:71529956-71529975 None:intergenic 50.0%
AGGGGGCTTGTAGAGCTTAA+AGG + chr7_3:71530986-71531005 None:intergenic 50.0%
CCCTAAACACTAAGCCATGG+TGG - chr7_3:71531002-71531021 Msa1121480:intron 50.0%
TGGGGACAGAGCAAAAGAGA+AGG + chr7_3:71531478-71531497 None:intergenic 50.0%
GATGCAGGTAGATGAGAGGA+CGG + chr7_3:71533223-71533242 None:intergenic 50.0%
GGATGATGCAGGTAGATGAG+AGG + chr7_3:71533227-71533246 None:intergenic 50.0%
TTGTCGCCAATGTCTTTCGG+TGG - chr7_3:71533527-71533546 Msa1121480:intron 50.0%
!! TCTGGTAGCTTTGTCTTCGG+TGG - chr7_3:71533575-71533594 Msa1121480:intron 50.0%
TATCTCCCTCCCTGGAAATG+TGG + chr7_3:71533739-71533758 None:intergenic 50.0%
GAGGATCAATTGACAGCCGT+TGG + chr7_3:71533829-71533848 None:intergenic 50.0%
! TGATTGTACTGGCGTGGTTG+TGG + chr7_3:71534787-71534806 None:intergenic 50.0%
ATCTGCATTCCAGGTCGTAG+TGG + chr7_3:71534909-71534928 None:intergenic 50.0%
! GAAGCCTTGTGTATCAGCTC+AGG + chr7_3:71534975-71534994 None:intergenic 50.0%
! TCTGGGATTCATGTGGCTTG+CGG - chr7_3:71534999-71535018 Msa1121480:intron 50.0%
ACAGAGCAGAGAGGTCAGTG+TGG + chr7_3:71527036-71527055 None:intergenic 55.0%
GCAGAAACATTCCCTGCTGC+TGG - chr7_3:71527181-71527200 Msa1121480:CDS 55.0%
AGCTGCTGAAACGACACCAC+AGG - chr7_3:71527216-71527235 Msa1121480:CDS 55.0%
! GGAGGTGTAGACTGAACCTG+TGG + chr7_3:71527235-71527254 None:intergenic 55.0%
GTCAGAGGGCAGATGTTGTG+TGG - chr7_3:71527360-71527379 Msa1121480:CDS 55.0%
TAGTACTCCCTCCGGTCACT+AGG - chr7_3:71527412-71527431 Msa1121480:CDS 55.0%
AGTACTCCCTCCGGTCACTA+GGG - chr7_3:71527413-71527432 Msa1121480:CDS 55.0%
CGGTCACTAGGGGTGGAAAT+AGG - chr7_3:71527424-71527443 Msa1121480:CDS 55.0%
!! CCTATGACGGGTAATAGGCC+AGG + chr7_3:71527512-71527531 None:intergenic 55.0%
CCTGGCCTATTACCCGTCAT+AGG - chr7_3:71527509-71527528 Msa1121480:CDS 55.0%
TTCAATTTCGAGGCCTGGCC+TGG - chr7_3:71527532-71527551 Msa1121480:CDS 55.0%
GCCTGGCCTGGCCTATTTAA+AGG - chr7_3:71527544-71527563 Msa1121480:CDS 55.0%
GCCTTTAAATAGGCCAGGCC+AGG + chr7_3:71527548-71527567 None:intergenic 55.0%
TAAACGAGCTGGGCCGAGTT+AGG - chr7_3:71527930-71527949 Msa1121480:intron 55.0%
CTGCGTCATCTCAAGATGGG+AGG + chr7_3:71528194-71528213 None:intergenic 55.0%
CTCCCATCTTGAGATGACGC+AGG - chr7_3:71528192-71528211 Msa1121480:intron 55.0%
GACGTGTCATGCCATGTCAC+AGG - chr7_3:71530767-71530786 Msa1121480:intron 55.0%
GTGTCATGCCATGTCACAGG+TGG - chr7_3:71530770-71530789 Msa1121480:intron 55.0%
GCCCCCTAAACACTAAGCCA+TGG - chr7_3:71530999-71531018 Msa1121480:intron 55.0%
GTGTCATGCCACGTCACATG+TGG + chr7_3:71532470-71532489 None:intergenic 55.0%
GGCATGACACGTCAGACATG+TGG - chr7_3:71532480-71532499 Msa1121480:intron 55.0%
CGCAGCACACCACATTTCCA+GGG - chr7_3:71533727-71533746 Msa1121480:intron 55.0%
AGCACACCACATTTCCAGGG+AGG - chr7_3:71533730-71533749 Msa1121480:intron 55.0%
GCACACCACATTTCCAGGGA+GGG - chr7_3:71533731-71533750 Msa1121480:intron 55.0%
!!! CTGGTTTTGCCACTACGACC+TGG - chr7_3:71534897-71534916 Msa1121480:intron 55.0%
GTACTCCCTCCGGTCACTAG+GGG - chr7_3:71527414-71527433 Msa1121480:CDS 60.0%
TTCCACCCCTAGTGACCGGA+GGG + chr7_3:71527422-71527441 None:intergenic 60.0%
TTTCCACCCCTAGTGACCGG+AGG + chr7_3:71527423-71527442 None:intergenic 60.0%
GGGGTGGAAATAGGCTAGGC+CGG - chr7_3:71527433-71527452 Msa1121480:CDS 60.0%
GGGTGGAAATAGGCTAGGCC+GGG - chr7_3:71527434-71527453 Msa1121480:CDS 60.0%
GGCTTGGGCCTTACAAAGCC+CGG + chr7_3:71527460-71527479 None:intergenic 60.0%
! GGCTTTGTAAGGCCCAAGCC+TGG - chr7_3:71527460-71527479 Msa1121480:CDS 60.0%
AGCTTAATAGGCCGGCCCGA+CGG - chr7_3:71527824-71527843 Msa1121480:intron 60.0%
GCTAGGCCATAGGTCCCTGT+CGG - chr7_3:71527963-71527982 Msa1121480:intron 60.0%
GCGCAGCACACCACATTTCC+AGG - chr7_3:71533726-71533745 Msa1121480:intron 60.0%
GGAAATAGGCTAGGCCGGGC+CGG - chr7_3:71527438-71527457 Msa1121480:CDS 65.0%
GAAATAGGCTAGGCCGGGCC+GGG - chr7_3:71527439-71527458 Msa1121480:CDS 65.0%
GCTTAATAGGCCGGCCCGAC+GGG - chr7_3:71527825-71527844 Msa1121480:intron 65.0%
GCCTATTAAGCCCGTCGGGC+CGG + chr7_3:71527838-71527857 None:intergenic 65.0%
GGCCATAGGTCCCTGTCGGA+CGG - chr7_3:71527967-71527986 Msa1121480:intron 65.0%
TGGCCTGTTCCCACCCCTAC+CGG - chr7_3:71527992-71528011 Msa1121480:intron 65.0%
TGACCGGTAGGGGTGGGAAC+AGG + chr7_3:71527998-71528017 None:intergenic 65.0%
CTCCCTCCGGTCACTAGGGG+TGG - chr7_3:71527417-71527436 Msa1121480:CDS 70.0%
! AGGCCGGGCCGGGCTTTGTA+AGG - chr7_3:71527449-71527468 Msa1121480:CDS 70.0%
GGGCCTTACAAAGCCCGGCC+CGG + chr7_3:71527455-71527474 None:intergenic 70.0%
! GCCGGCCCGACGGGCTTAAT+AGG - chr7_3:71527834-71527853 Msa1121480:intron 70.0%
GGCCGTCCGACAGGGACCTA+TGG + chr7_3:71527972-71527991 None:intergenic 70.0%
TAGGTCCCTGTCGGACGGCC+TGG - chr7_3:71527972-71527991 Msa1121480:intron 70.0%
ACAGGCCAGGCCGTCCGACA+GGG + chr7_3:71527980-71527999 None:intergenic 70.0%
AACAGGCCAGGCCGTCCGAC+AGG + chr7_3:71527981-71528000 None:intergenic 70.0%
GGTAGGGGTGGGAACAGGCC+AGG + chr7_3:71527993-71528012 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 71527006 71535335 71527006 ID=Msa1121480;Name=Msa1121480
chr7_3 mRNA 71527006 71535335 71527006 ID=Msa1121480-mRNA-1;Parent=Msa1121480;Name=Msa1121480-mRNA-1;_AED=0.25;_eAED=0.25;_QI=121|1|1|1|1|1|4|133|320
chr7_3 exon 71527006 71527777 71527006 ID=Msa1121480-mRNA-1:exon:18338;Parent=Msa1121480-mRNA-1
chr7_3 exon 71530555 71530716 71530555 ID=Msa1121480-mRNA-1:exon:18337;Parent=Msa1121480-mRNA-1
chr7_3 exon 71531782 71531832 71531782 ID=Msa1121480-mRNA-1:exon:18336;Parent=Msa1121480-mRNA-1
chr7_3 exon 71535104 71535335 71535104 ID=Msa1121480-mRNA-1:exon:18335;Parent=Msa1121480-mRNA-1
chr7_3 five_prime_UTR 71535215 71535335 71535215 ID=Msa1121480-mRNA-1:five_prime_utr;Parent=Msa1121480-mRNA-1
chr7_3 CDS 71535104 71535214 71535104 ID=Msa1121480-mRNA-1:cds;Parent=Msa1121480-mRNA-1
chr7_3 CDS 71531782 71531832 71531782 ID=Msa1121480-mRNA-1:cds;Parent=Msa1121480-mRNA-1
chr7_3 CDS 71530555 71530716 71530555 ID=Msa1121480-mRNA-1:cds;Parent=Msa1121480-mRNA-1
chr7_3 CDS 71527139 71527777 71527139 ID=Msa1121480-mRNA-1:cds;Parent=Msa1121480-mRNA-1
chr7_3 three_prime_UTR 71527006 71527138 71527006 ID=Msa1121480-mRNA-1:three_prime_utr;Parent=Msa1121480-mRNA-1
Gene Sequence

>Msa1121480

ATGGAGAAACAGGATGAAATACTATCTGTAGATCCAACCATCACTGACACTGAAGCAGAAACATTCCCTGCTGCTGGGATAGTAGAAGAAGCTGCTGAAACGACACCACAGTACTCTGAGAAGATGGCTCTTGATCGAGAGATGATTCTGCGAAATTGTGAGGAAAAAATAGGTGGAAATTCACCATGTTCTGCATGCAAGTTTCTGAGACGCAGATGCACAAAAGATTGCATCTTGGCTCCTTATTTCCCTTCTCATGAACCCCAAAAGATTGCCATAGTTCACAAGGTTTCTGGTGCTAGCAATATTAGCAAAATGCTGCAGGCAAAAGAAATTGATTTTCTTCCTTTATCCTTAAAGGATTTGGCTAACACCCCACTCGAACAGAAAGCTTTAACCTGGGAGGCATTTCTATGTTTTGTAGTTGGGGGTATGCTTGATATTTCTCCACAACAATATGGAATTTTACTAATGATATGTATTGGCTTCCTGAGTTACTATGCAAAAAACTCTACCACTCCATTTGATATGCAATTTGGAAAAACCACAACCACGCCAGTACAATCACTAATAAGCTTCAGTGAAGCATTTTATGCTTTCTTCCCAGAAATAACACATATCACCAAGTTCATGCTATGCTATGTTCTGTCTTGGATGCTGGTTTTGCCACTACGACCTGGAATGCAGATATTTTTGGTGCTACTACTCATTTCTGCACCAATTTTTTATTTTCCTGAGCTGATACACAAGGCTTCAGCTTCTGGGATTCATGTGGCTTGCGGCTCATTGAAGCTACCTCTGATTGGGTTTGCTACTTTAGGGGCTATTGGGCTTTCCCTTATTTGTGGATTTATGACATTGCTAATGGTTTATTTGAGGTGGAGATTCATATATAAAGGGAAACCAAGAGTTAGGGCAATTGAGGTTAGTTTAGATGGTTTGTCTGAGATTTTACAAGGATGA

Protein sequence

>Msa1121480

MEKQDEILSVDPTITDTEAETFPAAGIVEEAAETTPQYSEKMALDREMILRNCEEKIGGNSPCSACKFLRRRCTKDCILAPYFPSHEPQKIAIVHKVSGASNISKMLQAKEIDFLPLSLKDLANTPLEQKALTWEAFLCFVVGGMLDISPQQYGILLMICIGFLSYYAKNSTTPFDMQFGKTTTTPVQSLISFSEAFYAFFPEITHITKFMLCYVLSWMLVLPLRPGMQIFLVLLLISAPIFYFPELIHKASASGIHVACGSLKLPLIGFATLGAIGLSLICGFMTLLMVYLRWRFIYKGKPRVRAIEVSLDGLSEILQG*