AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0212990


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0212990 MtrunA17_Chr2g0312581 89.813 589 6 2 1 565 1 559 0.0 1053
Msa0212990 MtrunA17_Chr2g0293981 34.023 532 268 8 6 499 153 639 5.86e-94 303
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0212990 AT1G79030.1 62.669 592 159 8 3 564 1 560 0.0 676
Msa0212990 AT1G16680.1 61.630 589 163 7 3 564 1 553 0.0 664
Msa0212990 AT1G79030.2 64.770 457 99 8 138 564 1 425 0.0 548
Msa0212990 AT5G49580.3 33.633 556 255 13 30 536 175 665 6.17e-92 297
Msa0212990 AT5G49580.1 33.633 556 255 13 30 536 175 665 6.17e-92 297
Msa0212990 AT5G49580.2 32.874 435 213 9 30 447 175 547 2.67e-69 233

Find 190 sgRNAs with CRISPR-Local

Find 431 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAAAGGGTCATTGGATTTA+TGG 0.133402 2_1:+55445997 Msa0212990:five_prime_UTR
TGAAAGAAATGCAAGGTTTA+TGG 0.156009 2_1:-55448634 None:intergenic
TGTATCTCTGTTCTTATATT+AGG 0.158216 2_1:+55451404 Msa0212990:three_prime_UTR
GTGAACTGCTGTGGGATTTC+TGG 0.175841 2_1:-55449714 None:intergenic
ATTTATCTTAAACTGGTAAA+AGG 0.195207 2_1:+55445564 Msa0212990:five_prime_UTR
ATGCAGGGGTTGCTCGAAAT+TGG 0.197102 2_1:+55446261 Msa0212990:CDS
TGATAAGCAGAAAGAAATTT+TGG 0.214983 2_1:+55448857 Msa0212990:CDS
GCACGCTTGGTGGTATTAAT+TGG 0.222439 2_1:+55448552 Msa0212990:CDS
CCACCAAGCGTGCACGATTT+AGG 0.231062 2_1:-55448542 None:intergenic
TCCGATTGCTTCTGCTCTTC+AGG 0.238239 2_1:-55448714 None:intergenic
AGATGGATGGGTTGAATATA+AGG 0.245664 2_1:+55450214 Msa0212990:CDS
TGATCTCAGTAATCCATTTC+GGG 0.248137 2_1:-55451149 None:intergenic
TGGGAATCTACTTGAGTTAC+AGG 0.274469 2_1:-55450869 None:intergenic
TGAAATGTGGTAAAGAAAAT+TGG 0.282168 2_1:-55451252 None:intergenic
TTGATCTCAGTAATCCATTT+CGG 0.284846 2_1:-55451150 None:intergenic
ATTGAAAGAGGGTATGAAAT+TGG 0.285370 2_1:-55445461 None:intergenic
GTTACTCACATTGATCATTA+AGG 0.285679 2_1:+55451334 Msa0212990:three_prime_UTR
GGTTTACGTGCTTGTTAGTA+TGG 0.289745 2_1:+55446423 Msa0212990:CDS
ATGAAGAAGAATATTGGATT+TGG 0.289824 2_1:-55445363 None:intergenic
AAAGAGAGAAAGAGGTAAAA+TGG 0.293629 2_1:-55445824 None:intergenic
GGTTGAATATAAGGGATCTT+TGG 0.299665 2_1:+55450223 Msa0212990:CDS
TAGGGTTGTTCAATCAAGTT+TGG 0.309311 2_1:+55446134 Msa0212990:CDS
AAGTAGATTCCCATGGGATT+TGG 0.312431 2_1:+55450879 Msa0212990:CDS
TGGGGTTGCTGTCCAATACT+TGG 0.313236 2_1:+55447111 Msa0212990:CDS
TTTCAGTCTTTCATTAAGTT+TGG 0.319308 2_1:+55446337 Msa0212990:CDS
TGGCATACATCCACAAAATA+AGG 0.320756 2_1:-55447174 None:intergenic
CACCAAGCGTGCACGATTTA+GGG 0.330951 2_1:-55448541 None:intergenic
TGAAGTGATTTATCTTAAAC+TGG 0.332869 2_1:+55445557 Msa0212990:five_prime_UTR
AGTGCGGTAATTCACATGTT+TGG 0.344384 2_1:+55450010 Msa0212990:CDS
GGTGACAGCAGGTGGTTTAC+TGG 0.344960 2_1:-55448823 None:intergenic
TGCAGGGGTTGCTCGAAATT+GGG 0.345633 2_1:+55446262 Msa0212990:CDS
GATCAAGGTTATTTATTTGA+TGG 0.350421 2_1:+55445951 Msa0212990:five_prime_UTR
AAGAGAATGAAGAAGAATAT+TGG 0.355344 2_1:-55445369 None:intergenic
AAGATAAATCACTTCAATAA+AGG 0.355742 2_1:-55445550 None:intergenic
AAGCTCGGTCGGTGGGTGTT+AGG 0.357074 2_1:-55450811 None:intergenic
GTGAAATTTGTTGTAGATCA+AGG 0.358558 2_1:+55445936 Msa0212990:five_prime_UTR
GAAGATCAAGATTGAAACTT+TGG 0.363008 2_1:-55445433 None:intergenic
ATTTGACCTGTGGCTTCAAC+AGG 0.368409 2_1:+55450936 Msa0212990:CDS
AGGGTTGTTCAATCAAGTTT+GGG 0.374931 2_1:+55446135 Msa0212990:CDS
TTTACTCCATCCAATCCCTT+TGG 0.376262 2_1:-55451110 None:intergenic
CTTCAACAGGCTTTAGCATC+TGG 0.376602 2_1:+55450949 Msa0212990:CDS
GTCTTCATCCATCATCATTT+CGG 0.377560 2_1:-55450905 None:intergenic
TTACTCCATCCAATCCCTTT+GGG 0.377996 2_1:-55451109 None:intergenic
GTGCGGTAATTCACATGTTT+GGG 0.380056 2_1:+55450011 Msa0212990:CDS
CAATACTTGGGTTATACTCC+TGG 0.380895 2_1:+55447124 Msa0212990:CDS
TAGCATCACAAAAGGGTCAT+TGG 0.382212 2_1:+55445989 Msa0212990:five_prime_UTR
TGAATGTTTCAGGTTACTGC+TGG 0.391743 2_1:+55447091 Msa0212990:intron
TCATGCAGGGAATGGCTTGT+AGG 0.396238 2_1:+55450788 Msa0212990:intron
TCATGGTGATGGAGGATATA+GGG 0.396369 2_1:+55446116 Msa0212990:exon
TTCAAATTGCCTCAAAAGAA+AGG 0.403167 2_1:+55451015 Msa0212990:CDS
TGGTTACTAAGGATTTCTTT+TGG 0.404085 2_1:+55451451 Msa0212990:three_prime_UTR
AGAAATGAAGAATGAGGAAA+AGG 0.404570 2_1:-55445407 None:intergenic
GGCATTGGCCGATGGTATGC+AGG 0.413497 2_1:+55446245 Msa0212990:CDS
TTTGTTTAAGAAACCCGAAA+TGG 0.414667 2_1:+55451136 Msa0212990:three_prime_UTR
GTCTTGCTGAAAAGCTCAAT+AGG 0.415248 2_1:+55451059 Msa0212990:exon
ATCAAGTTTGGGGATGGCTT+CGG 0.416194 2_1:+55446146 Msa0212990:CDS
CTTAATCATTATGATGCCCT+TGG 0.419772 2_1:+55448942 Msa0212990:CDS
ATAAGAACAGAGATACAATA+AGG 0.420872 2_1:-55451398 None:intergenic
CCTAAATCGTGCACGCTTGG+TGG 0.422799 2_1:+55448542 Msa0212990:CDS
TGCTTTGGCCTTGCTCCTGT+TGG 0.422898 2_1:-55450040 None:intergenic
GATGGATGGGTTGAATATAA+GGG 0.424705 2_1:+55450215 Msa0212990:CDS
CTGTATCCGTCTGGATTCTT+CGG 0.424876 2_1:-55449980 None:intergenic
GACCTGACACCATCTTGCTT+TGG 0.429270 2_1:-55450055 None:intergenic
TGGAAGGACTCTGCTGTAAG+GGG 0.429309 2_1:+55446313 Msa0212990:CDS
GTCATGGTGATGGAGGATAT+AGG 0.429732 2_1:+55446115 Msa0212990:exon
ACTTTCATCAAGTTTGTAAG+TGG 0.432944 2_1:+55446081 Msa0212990:five_prime_UTR
AATTAAAGACTTCAAATTCA+CGG 0.434500 2_1:-55445880 None:intergenic
TTGGAAGGACTCTGCTGTAA+GGG 0.436084 2_1:+55446312 Msa0212990:CDS
GAAATGAAGAATGAGGAAAA+GGG 0.438569 2_1:-55445406 None:intergenic
CTCCCTAAATCGTGCACGCT+TGG 0.443827 2_1:+55448539 Msa0212990:CDS
GAAACTTCAATGTGCATATG+AGG 0.445625 2_1:+55449469 Msa0212990:CDS
CACAGTTCGAGCACGCCAAC+AGG 0.445831 2_1:-55446182 None:intergenic
TGCAAATTCTCAGATTCAAC+TGG 0.451152 2_1:-55448786 None:intergenic
TTGAATGTGAGAGTATTTAG+TGG 0.453509 2_1:+55445769 Msa0212990:five_prime_UTR
TTTGGAAGGACTCTGCTGTA+AGG 0.454087 2_1:+55446311 Msa0212990:CDS
TTACTGAGATCAAAACTAGA+AGG 0.456205 2_1:+55451160 Msa0212990:three_prime_UTR
CCAAGCCAACCATGTTTACA+TGG 0.459618 2_1:-55450834 None:intergenic
CTTTGTGCACTGTATCCGTC+TGG 0.460373 2_1:-55449989 None:intergenic
GGATTGAACAATGAAAACTT+TGG 0.461683 2_1:-55445342 None:intergenic
TGATGATTTAGCATCACAAA+AGG 0.463802 2_1:+55445981 Msa0212990:five_prime_UTR
TCTGACTTCGATGTATTGCT+TGG 0.466273 2_1:+55446402 Msa0212990:CDS
CCATGTAAACATGGTTGGCT+TGG 0.467923 2_1:+55450834 Msa0212990:CDS
TGAGGAAAAGGGGTTTCAAA+AGG 0.468417 2_1:-55445395 None:intergenic
TTCATTGCCTACATCCCAAA+GGG 0.469914 2_1:+55451095 Msa0212990:three_prime_UTR
AGGAGGAAAGCTTGTAACTT+AGG 0.471670 2_1:-55447961 None:intergenic
ATCAAGGTTATTTATTTGAT+GGG 0.474990 2_1:+55445952 Msa0212990:five_prime_UTR
GAAGCAATCGGAGACAGTTA+TGG 0.475066 2_1:+55448725 Msa0212990:CDS
ATCCCACAGCAGTTCACATC+AGG 0.475853 2_1:+55449720 Msa0212990:CDS
CAGGAGTATAACCCAAGTAT+TGG 0.476147 2_1:-55447123 None:intergenic
TGTTCAATCAAGTTTGGGGA+TGG 0.476331 2_1:+55446140 Msa0212990:CDS
CTGTTGGCGTGCTCGAACTG+TGG 0.477803 2_1:+55446183 Msa0212990:CDS
TGCCTACATCCCAAAGGGAT+TGG 0.478963 2_1:+55451100 Msa0212990:three_prime_UTR
GCTTTCCTCCTCATTATCCT+AGG 0.480037 2_1:+55447973 Msa0212990:CDS
GGCCAAAGCAAGATGGTGTC+AGG 0.480599 2_1:+55450053 Msa0212990:CDS
CGATGTTTATTGAACGGCAT+TGG 0.480918 2_1:+55446230 Msa0212990:CDS
ATGTTTGGGTATGCACCAAC+AGG 0.481258 2_1:+55450025 Msa0212990:CDS
TTTATCTTAAACTGGTAAAA+GGG 0.481929 2_1:+55445565 Msa0212990:five_prime_UTR
TCAGATTCAACTGGTGGGAT+AGG 0.484618 2_1:-55448777 None:intergenic
GAGAGTATTTAGTGGTATCA+TGG 0.485450 2_1:+55445777 Msa0212990:five_prime_UTR
TCTTGCTGAAAAGCTCAATA+GGG 0.496208 2_1:+55451060 Msa0212990:exon
CCCTAAAATCTGATTGAAAG+AGG 0.500378 2_1:-55445473 None:intergenic
TTGAAAGAGGGTATGAAATT+GGG 0.503015 2_1:-55445460 None:intergenic
CAAGTAAAAGTGGGATGGCT+TGG 0.506505 2_1:+55448600 Msa0212990:CDS
GTAAAGAAAATTGGCAACCT+TGG 0.506912 2_1:-55451243 None:intergenic
ATCCAATCCCTTTGGGATGT+AGG 0.511524 2_1:-55451102 None:intergenic
AGCTTCCATGTAAACATGGT+TGG 0.511891 2_1:+55450829 Msa0212990:CDS
AAGTCTTTAATTTATGATGT+CGG 0.518300 2_1:+55445891 Msa0212990:five_prime_UTR
TCAAATTGCCTCAAAAGAAA+GGG 0.520660 2_1:+55451016 Msa0212990:CDS
TCCTGAAGAGCAGAAGCAAT+CGG 0.523623 2_1:+55448713 Msa0212990:CDS
GAATGTTTCAGGTTACTGCT+GGG 0.526617 2_1:+55447092 Msa0212990:intron
CCTCAAAACGCAGGAAGAGT+TGG 0.527025 2_1:+55450986 Msa0212990:CDS
AATACTTGGGTTATACTCCT+GGG 0.528723 2_1:+55447125 Msa0212990:CDS
TATGCCAACTTTCTGATCAC+AGG 0.529729 2_1:+55447190 Msa0212990:CDS
ACAGGATTACTACTCATAGT+TGG 0.530073 2_1:+55447208 Msa0212990:CDS
TACATCCCAAAGGGATTGGA+TGG 0.530497 2_1:+55451104 Msa0212990:three_prime_UTR
ACCATGTTTACATGGAAGCT+CGG 0.530586 2_1:-55450826 None:intergenic
TAATCCTGTGATCAGAAAGT+TGG 0.531592 2_1:-55447194 None:intergenic
CATAACTCTAAAATGAATGC+TGG 0.533736 2_1:-55451537 None:intergenic
GGGGTTGCTGTCCAATACTT+GGG 0.535229 2_1:+55447112 Msa0212990:CDS
AAATCCTACCTAGGATAATG+AGG 0.537407 2_1:-55447981 None:intergenic
TGGAGCAGAAATGAAGAATG+AGG 0.539831 2_1:-55445413 None:intergenic
GTATTCTGTTCAAGTAAAAG+TGG 0.543915 2_1:+55448590 Msa0212990:CDS
TTAATTTATGATGTCGGAGT+AGG 0.544017 2_1:+55445897 Msa0212990:five_prime_UTR
GGTCATTGGATTTATGGTGA+TGG 0.544341 2_1:+55446003 Msa0212990:five_prime_UTR
TTTGGACGCCGAAATGATGA+TGG 0.545956 2_1:+55450897 Msa0212990:CDS
TATTGAACGGCATTGGCCGA+TGG 0.550013 2_1:+55446237 Msa0212990:CDS
GAGGAAAAGGGGTTTCAAAA+GGG 0.552128 2_1:-55445394 None:intergenic
AGCAAAGGATGGAGATGGAT+GGG 0.552152 2_1:+55450202 Msa0212990:CDS
ATTAAGAAAAGAAGAATCCA+TGG 0.556650 2_1:+55449678 Msa0212990:CDS
GATGATTTAGCATCACAAAA+GGG 0.556732 2_1:+55445982 Msa0212990:five_prime_UTR
CTAAAGCCTGTTGAAGCCAC+AGG 0.559744 2_1:-55450942 None:intergenic
GCATTGGCCGATGGTATGCA+GGG 0.560371 2_1:+55446246 Msa0212990:CDS
CATAAAATATATGTACACTA+AGG 0.560794 2_1:+55451279 Msa0212990:three_prime_UTR
ATTTCGGCGTCCAAATCCCA+TGG 0.562239 2_1:-55450889 None:intergenic
AAGCAAAGGATGGAGATGGA+TGG 0.562575 2_1:+55450201 Msa0212990:CDS
AAACTGCGATGTTTATTGAA+CGG 0.563453 2_1:+55446224 Msa0212990:CDS
TACATGGAAGCTCGGTCGGT+GGG 0.566355 2_1:-55450818 None:intergenic
GGAAGGACTCTGCTGTAAGG+GGG 0.567571 2_1:+55446314 Msa0212990:CDS
TACCTGATGTGAACTGCTGT+GGG 0.569328 2_1:-55449722 None:intergenic
CCTAAAATCTGATTGAAAGA+GGG 0.569348 2_1:-55445472 None:intergenic
GCAGGGGTTGCTCGAAATTG+GGG 0.573947 2_1:+55446263 Msa0212990:CDS
CAGTTTCATCAAGCAAAGGA+TGG 0.576801 2_1:+55450191 Msa0212990:CDS
ATCTGTAGAGGTCATGGTGA+TGG 0.577651 2_1:+55446105 Msa0212990:exon
AAATGAAGAATGAGGAAAAG+GGG 0.582281 2_1:-55445405 None:intergenic
CATCAAGCAAAGGATGGAGA+TGG 0.583990 2_1:+55450197 Msa0212990:CDS
GGATTACTACTCATAGTTGG+AGG 0.586894 2_1:+55447211 Msa0212990:CDS
TGTCATTTGAAAGAAATGCA+AGG 0.588628 2_1:-55448641 None:intergenic
AAATTCTCAGATTCAACTGG+TGG 0.588839 2_1:-55448783 None:intergenic
CTGTCAGTTTCATCAAGCAA+AGG 0.589407 2_1:+55450187 Msa0212990:CDS
CTGTTCAAGTAAAAGTGGGA+TGG 0.589512 2_1:+55448595 Msa0212990:CDS
TTTGTGGCGGCTAAATCCAA+GGG 0.591814 2_1:-55448958 None:intergenic
GTGGTGAATTATAAGAGCCA+AGG 0.591876 2_1:+55451226 Msa0212990:three_prime_UTR
TTAAACTGGTAAAAGGGTCA+AGG 0.592114 2_1:+55445571 Msa0212990:five_prime_UTR
GAAATGCAAGGTTTATGGCA+AGG 0.596267 2_1:-55448629 None:intergenic
TGTTTACATGGAAGCTCGGT+CGG 0.599305 2_1:-55450822 None:intergenic
ATTCAATTGATGAAATGAGA+AGG 0.599840 2_1:+55448907 Msa0212990:CDS
TGTAGAGGTCATGGTGATGG+AGG 0.601487 2_1:+55446108 Msa0212990:exon
TTACATGGAAGCTCGGTCGG+TGG 0.608397 2_1:-55450819 None:intergenic
TTTGCGAGTCCTCAAAACGC+AGG 0.609028 2_1:+55450977 Msa0212990:CDS
ACGAAGAGGCATTTGACCTG+TGG 0.610097 2_1:+55450926 Msa0212990:CDS
GAGCAACCCCTGCATACCAT+CGG 0.610183 2_1:-55446253 None:intergenic
TTACCTGATGTGAACTGCTG+TGG 0.612719 2_1:-55449723 None:intergenic
TATTCTGTTCAAGTAAAAGT+GGG 0.614296 2_1:+55448591 Msa0212990:CDS
GTAACTCAAGTAGATTCCCA+TGG 0.614310 2_1:+55450872 Msa0212990:CDS
GGAGCAAGGCCAAAGCAAGA+TGG 0.614781 2_1:+55450046 Msa0212990:CDS
AATTCTCAGATTCAACTGGT+GGG 0.617335 2_1:-55448782 None:intergenic
GGGTTGTTCAATCAAGTTTG+GGG 0.617373 2_1:+55446136 Msa0212990:CDS
TTATTAGCATGTATATACAA+AGG 0.617487 2_1:-55451475 None:intergenic
CTGCTTATCAACAACTGATG+TGG 0.617904 2_1:-55448844 None:intergenic
TTTGTAAGTGGAATCTGTAG+AGG 0.618896 2_1:+55446093 Msa0212990:five_prime_UTR
TGAGTAACTCCTATAAACCT+AGG 0.619287 2_1:-55451319 None:intergenic
ACAACTGATGTGGTGACAGC+AGG 0.620614 2_1:-55448834 None:intergenic
ATCTACTTGAGTTACAGGAA+TGG 0.621712 2_1:-55450864 None:intergenic
TTTCATTGCCTACATCCCAA+AGG 0.622491 2_1:+55451094 Msa0212990:three_prime_UTR
TAACTCAAGTAGATTCCCAT+GGG 0.623997 2_1:+55450873 Msa0212990:CDS
AATGTTTCAGGTTACTGCTG+GGG 0.626076 2_1:+55447093 Msa0212990:intron
AGTGGAATCTGTAGAGGTCA+TGG 0.628752 2_1:+55446099 Msa0212990:exon
GGTATGCACCAACAGGAGCA+AGG 0.632037 2_1:+55450032 Msa0212990:CDS
CGGATACAGTGCACAAAGTG+CGG 0.640827 2_1:+55449994 Msa0212990:CDS
GATGATGGATGAAGACGAAG+AGG 0.646374 2_1:+55450912 Msa0212990:CDS
TTTCGGCGTCCAAATCCCAT+GGG 0.650751 2_1:-55450888 None:intergenic
AACAGAATACATAGCATATG+CGG 0.653102 2_1:-55448577 None:intergenic
TGATGCTCTTGCTTATAATG+TGG 0.655740 2_1:+55446365 Msa0212990:CDS
CATTGGCCGATGGTATGCAG+GGG 0.658782 2_1:+55446247 Msa0212990:CDS
ACCGAGCTTCCATGTAAACA+TGG 0.658792 2_1:+55450825 Msa0212990:CDS
ATCGTTCCGAAGAATCCAGA+CGG 0.659900 2_1:+55449974 Msa0212990:CDS
GGTCACGAAAAGATGCCTGT+TGG 0.663139 2_1:+55446167 Msa0212990:CDS
TCCTACCTAGGATAATGAGG+AGG 0.673070 2_1:-55447978 None:intergenic
ACTGATGTGGTGACAGCAGG+TGG 0.695798 2_1:-55448831 None:intergenic
GATGAGTCATGAGAGCATTG+TGG 0.727305 2_1:+55451207 Msa0212990:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTAAATTATTATATAAATT+AGG - chr2_1:55448408-55448427 None:intergenic 0.0%
!!! TTTTAATGAAAATTCATAAA+TGG - chr2_1:55446523-55446542 None:intergenic 10.0%
!! AATAAAAATAAAAACTCATT+CGG + chr2_1:55451503-55451522 Msa0212990:three_prime_UTR 10.0%
!!! ATTTTAAGAAAAAAAGTCAA+AGG - chr2_1:55446659-55446678 None:intergenic 15.0%
!!! ATTATACAAATTTTATGTAG+AGG + chr2_1:55446687-55446706 Msa0212990:intron 15.0%
!! TTTAATATTTGTTTGTGTTT+GGG + chr2_1:55447784-55447803 Msa0212990:intron 15.0%
!! AAGGAAAAAAAAAATCAAAT+AGG - chr2_1:55447816-55447835 None:intergenic 15.0%
!! AAGCATAAAAAATTGAAAAT+GGG - chr2_1:55447867-55447886 None:intergenic 15.0%
!! AAAGCATAAAAAATTGAAAA+TGG - chr2_1:55447868-55447887 None:intergenic 15.0%
!!! TTTTCAATTTTTTATGCTTT+TGG + chr2_1:55447868-55447887 Msa0212990:intron 15.0%
!!! TATTATAAGAACTTTTAACA+AGG - chr2_1:55448315-55448334 None:intergenic 15.0%
!! CTATCTTATAATTGATATAT+TGG + chr2_1:55449519-55449538 Msa0212990:intron 15.0%
!! TCCTTAATATATAATCTATT+AGG + chr2_1:55449817-55449836 Msa0212990:intron 15.0%
!! TCCTAATAGATTATATATTA+AGG - chr2_1:55449821-55449840 None:intergenic 15.0%
!!! TTTTTCTTTAATTGTTCAAA+AGG - chr2_1:55449924-55449943 None:intergenic 15.0%
!! TTGAACAATTAAAGAAAAAA+AGG + chr2_1:55449925-55449944 Msa0212990:intron 15.0%
!!! TTCAAGTTCATATTTTTGAT+GGG + chr2_1:55445519-55445538 Msa0212990:five_prime_UTR 20.0%
!! AAGATAAATCACTTCAATAA+AGG - chr2_1:55445553-55445572 None:intergenic 20.0%
!! ATTTATCTTAAACTGGTAAA+AGG + chr2_1:55445564-55445583 Msa0212990:five_prime_UTR 20.0%
!! TTTATCTTAAACTGGTAAAA+GGG + chr2_1:55445565-55445584 Msa0212990:five_prime_UTR 20.0%
!! AATTAAAGACTTCAAATTCA+CGG - chr2_1:55445883-55445902 None:intergenic 20.0%
!!! AAGTCTTTAATTTATGATGT+CGG + chr2_1:55445891-55445910 Msa0212990:five_prime_UTR 20.0%
!! ATCAAGGTTATTTATTTGAT+GGG + chr2_1:55445952-55445971 Msa0212990:five_prime_UTR 20.0%
!!! TTACATTATCGTTGATTTTT+TGG + chr2_1:55446293-55446312 Msa0212990:CDS 20.0%
!!! ATGAATTTTCATTAAAACTG+CGG + chr2_1:55446526-55446545 Msa0212990:intron 20.0%
!!! ACATTTTACAATTACCTTAT+TGG + chr2_1:55446592-55446611 Msa0212990:intron 20.0%
!!! ATGATTTTAATTTATCTCTG+TGG + chr2_1:55446886-55446905 Msa0212990:intron 20.0%
!!! CAATATTTTGAACTCAAATT+AGG - chr2_1:55446974-55446993 None:intergenic 20.0%
!!! AATTTGAGTTCAAAATATTG+TGG + chr2_1:55446974-55446993 Msa0212990:intron 20.0%
!!! TCATATTGAAATTTTGATTC+TGG + chr2_1:55447441-55447460 Msa0212990:intron 20.0%
!! AACAACATATTTAACACTAA+AGG - chr2_1:55447736-55447755 None:intergenic 20.0%
!! GTTTAATATTTGTTTGTGTT+TGG + chr2_1:55447783-55447802 Msa0212990:intron 20.0%
!! GTTAATATAATGTTCTATGA+CGG + chr2_1:55448235-55448254 Msa0212990:intron 20.0%
!!! TTTTAACAAGGATGAAAAAA+TGG - chr2_1:55448303-55448322 None:intergenic 20.0%
!! AGTTCTTATAATAAAGTCAT+TGG + chr2_1:55448322-55448341 Msa0212990:intron 20.0%
!! GTTCTTATAATAAAGTCATT+GGG + chr2_1:55448323-55448342 Msa0212990:intron 20.0%
!! AAATATTTGATGTATCAGAA+TGG + chr2_1:55450384-55450403 Msa0212990:intron 20.0%
!! AATATTTGATGTATCAGAAT+GGG + chr2_1:55450385-55450404 Msa0212990:intron 20.0%
!!! TGATACATTAGTTTGTTTAT+AGG + chr2_1:55450724-55450743 Msa0212990:intron 20.0%
!!! TATTTTATGGATATGAAATG+TGG - chr2_1:55451268-55451287 None:intergenic 20.0%
!!! CTTAGTGTACATATATTTTA+TGG - chr2_1:55451281-55451300 None:intergenic 20.0%
!! CATAAAATATATGTACACTA+AGG + chr2_1:55451279-55451298 Msa0212990:three_prime_UTR 20.0%
!! TTATTAGCATGTATATACAA+AGG - chr2_1:55451478-55451497 None:intergenic 20.0%
!!! TTGAAAAGTTTTGTAAAGAG+AGG - chr2_1:55445260-55445279 None:intergenic 25.0%
! ATGAAGAAGAATATTGGATT+TGG - chr2_1:55445366-55445385 None:intergenic 25.0%
! AAGAGAATGAAGAAGAATAT+TGG - chr2_1:55445372-55445391 None:intergenic 25.0%
! CATCAAAAATATGAACTTGA+AGG - chr2_1:55445520-55445539 None:intergenic 25.0%
!!! CTTCAAGTTCATATTTTTGA+TGG + chr2_1:55445518-55445537 Msa0212990:five_prime_UTR 25.0%
! TGAAGTGATTTATCTTAAAC+TGG + chr2_1:55445557-55445576 Msa0212990:five_prime_UTR 25.0%
!!! ATAGTGTTAGATTTTTCAGT+AGG + chr2_1:55445597-55445616 Msa0212990:five_prime_UTR 25.0%
!!! TAGTGTTAGATTTTTCAGTA+GGG + chr2_1:55445598-55445617 Msa0212990:five_prime_UTR 25.0%
!! ACATTGTGTTTTGTGAAAAA+GGG + chr2_1:55445649-55445668 Msa0212990:five_prime_UTR 25.0%
!!! CTTTGTGTTGTTTTGTTTTT+AGG + chr2_1:55445683-55445702 Msa0212990:five_prime_UTR 25.0%
!! TTTTAGGCTTTTATGAATAG+TGG + chr2_1:55445699-55445718 Msa0212990:five_prime_UTR 25.0%
! GATCAAGGTTATTTATTTGA+TGG + chr2_1:55445951-55445970 Msa0212990:five_prime_UTR 25.0%
!!! ATTATCGTTGATTTTTTGGA+AGG + chr2_1:55446297-55446316 Msa0212990:CDS 25.0%
! TTTCAGTCTTTCATTAAGTT+TGG + chr2_1:55446337-55446356 Msa0212990:CDS 25.0%
! AGTAAGAACAAAAATTCAGA+CGG - chr2_1:55446467-55446486 None:intergenic 25.0%
!! CTGAATTTTTGTTCTTACTT+TGG + chr2_1:55446468-55446487 Msa0212990:intron 25.0%
!!! ATATTCTAGAATGACCAATA+AGG - chr2_1:55446609-55446628 None:intergenic 25.0%
!! TTACTCTCCTAAATTTTGAA+GGG - chr2_1:55446764-55446783 None:intergenic 25.0%
!! ATTACTCTCCTAAATTTTGA+AGG - chr2_1:55446765-55446784 None:intergenic 25.0%
! TTCAAAATTTAGGAGAGTAA+TGG + chr2_1:55446764-55446783 Msa0212990:intron 25.0%
!!! CATTGAGTTCTAATTTTAGT+CGG + chr2_1:55446858-55446877 Msa0212990:intron 25.0%
!!! TTTTTGCTATCCTTATTTTG+TGG + chr2_1:55447164-55447183 Msa0212990:CDS 25.0%
!!! ATGATGCTTTTATTGTTGTT+TGG + chr2_1:55447235-55447254 Msa0212990:intron 25.0%
!!! TGATGCTTTTATTGTTGTTT+GGG + chr2_1:55447236-55447255 Msa0212990:intron 25.0%
! AGTGTATACAATACAAAAGA+CGG - chr2_1:55447322-55447341 None:intergenic 25.0%
! TAAAATCCACAAACTCAAAA+TGG - chr2_1:55447698-55447717 None:intergenic 25.0%
!!! TTTTGAGTTTGTGGATTTTA+AGG + chr2_1:55447698-55447717 Msa0212990:intron 25.0%
! AATAATCATGCAACAGAAAA+AGG - chr2_1:55447835-55447854 None:intergenic 25.0%
!!! TTCTGATTTGTATTTTAAGC+AGG + chr2_1:55447915-55447934 Msa0212990:CDS 25.0%
! AAAAGTAAAAAATCCTACCT+AGG - chr2_1:55447993-55448012 None:intergenic 25.0%
! AAACAAAATTTCAGGATTGT+AGG - chr2_1:55448492-55448511 None:intergenic 25.0%
! TGATTGACAAACAAAATTTC+AGG - chr2_1:55448500-55448519 None:intergenic 25.0%
! TATTCTGTTCAAGTAAAAGT+GGG + chr2_1:55448591-55448610 Msa0212990:CDS 25.0%
!! TTTTGAATTTTCTGCTTCAA+TGG + chr2_1:55448664-55448683 Msa0212990:CDS 25.0%
!! TGATAAGCAGAAAGAAATTT+TGG + chr2_1:55448857-55448876 Msa0212990:CDS 25.0%
! ATTCAATTGATGAAATGAGA+AGG + chr2_1:55448907-55448926 Msa0212990:CDS 25.0%
!! ATTTTTGACCTATAGTAATG+TGG + chr2_1:55449135-55449154 Msa0212990:intron 25.0%
! AGTTAATACCACATTACTAT+AGG - chr2_1:55449146-55449165 None:intergenic 25.0%
!! TATTAACTAGCTGACTTAAT+GGG + chr2_1:55449158-55449177 Msa0212990:intron 25.0%
!!! TACTGTTCAAGTTTTTAAGA+AGG - chr2_1:55449283-55449302 None:intergenic 25.0%
!! TGTTATCATTTTCATCATGT+AGG + chr2_1:55449388-55449407 Msa0212990:intron 25.0%
! ATTAAGAAAAGAAGAATCCA+TGG + chr2_1:55449678-55449697 Msa0212990:CDS 25.0%
! TGGAATTTACAAGAATATGT+CGG - chr2_1:55449773-55449792 None:intergenic 25.0%
!! TTCTTTTGCATTGTAATGAA+CGG - chr2_1:55449886-55449905 None:intergenic 25.0%
! TTGTTCAAAAGGTAAATGAA+GGG - chr2_1:55449913-55449932 None:intergenic 25.0%
! ATTGTTCAAAAGGTAAATGA+AGG - chr2_1:55449914-55449933 None:intergenic 25.0%
!! TACTCTACAAGCAATATTTT+TGG + chr2_1:55450426-55450445 Msa0212990:intron 25.0%
!!! TACAAAGTATTGTCAAATAG+CGG + chr2_1:55450560-55450579 Msa0212990:intron 25.0%
! TGAAATGTGGTAAAGAAAAT+TGG - chr2_1:55451255-55451274 None:intergenic 25.0%
! ATAAGAACAGAGATACAATA+AGG - chr2_1:55451401-55451420 None:intergenic 25.0%
! TGTATCTCTGTTCTTATATT+AGG + chr2_1:55451404-55451423 Msa0212990:three_prime_UTR 25.0%
!! TCTTTTCAATATGGTTACTA+AGG + chr2_1:55451440-55451459 Msa0212990:three_prime_UTR 25.0%
! TTTTGTAAAGAGAGGAGTAA+GGG - chr2_1:55445252-55445271 None:intergenic 30.0%
GGATTGAACAATGAAAACTT+TGG - chr2_1:55445345-55445364 None:intergenic 30.0%
AAATGAAGAATGAGGAAAAG+GGG - chr2_1:55445408-55445427 None:intergenic 30.0%
GAAATGAAGAATGAGGAAAA+GGG - chr2_1:55445409-55445428 None:intergenic 30.0%
AGAAATGAAGAATGAGGAAA+AGG - chr2_1:55445410-55445429 None:intergenic 30.0%
GAAGATCAAGATTGAAACTT+TGG - chr2_1:55445436-55445455 None:intergenic 30.0%
! TTGAAAGAGGGTATGAAATT+GGG - chr2_1:55445463-55445482 None:intergenic 30.0%
! ATTGAAAGAGGGTATGAAAT+TGG - chr2_1:55445464-55445483 None:intergenic 30.0%
CCTAAAATCTGATTGAAAGA+GGG - chr2_1:55445475-55445494 None:intergenic 30.0%
! CCTCTTTCAATCAGATTTTA+GGG + chr2_1:55445473-55445492 Msa0212990:five_prime_UTR 30.0%
! TTAGGGTTTTTCACTGTAAA+AGG + chr2_1:55445490-55445509 Msa0212990:five_prime_UTR 30.0%
! TAGGGTTTTTCACTGTAAAA+GGG + chr2_1:55445491-55445510 Msa0212990:five_prime_UTR 30.0%
! GACATTGTGTTTTGTGAAAA+AGG + chr2_1:55445648-55445667 Msa0212990:five_prime_UTR 30.0%
!!! ATGAATAGTGGTTGCTTTTT+TGG + chr2_1:55445711-55445730 Msa0212990:five_prime_UTR 30.0%
!!! GCTTTTTTGGAAGCTTATTT+CGG + chr2_1:55445724-55445743 Msa0212990:five_prime_UTR 30.0%
!! TTGAATGTGAGAGTATTTAG+TGG + chr2_1:55445769-55445788 Msa0212990:five_prime_UTR 30.0%
AAAGAGAGAAAGAGGTAAAA+TGG - chr2_1:55445827-55445846 None:intergenic 30.0%
!!! TTACCTCTTTCTCTCTTTTT+TGG + chr2_1:55445829-55445848 Msa0212990:five_prime_UTR 30.0%
AATCCAAAAAAGAGAGAAAG+AGG - chr2_1:55445835-55445854 None:intergenic 30.0%
TTAATTTATGATGTCGGAGT+AGG + chr2_1:55445897-55445916 Msa0212990:five_prime_UTR 30.0%
!! GTGAAATTTGTTGTAGATCA+AGG + chr2_1:55445936-55445955 Msa0212990:five_prime_UTR 30.0%
TGATGATTTAGCATCACAAA+AGG + chr2_1:55445981-55446000 Msa0212990:five_prime_UTR 30.0%
GATGATTTAGCATCACAAAA+GGG + chr2_1:55445982-55446001 Msa0212990:five_prime_UTR 30.0%
!!! TAGTTTTAGTCTTAGTAGTG+AGG + chr2_1:55446054-55446073 Msa0212990:five_prime_UTR 30.0%
ACTTTCATCAAGTTTGTAAG+TGG + chr2_1:55446081-55446100 Msa0212990:five_prime_UTR 30.0%
AAACTGCGATGTTTATTGAA+CGG + chr2_1:55446224-55446243 Msa0212990:CDS 30.0%
GTAAGAACAAAAATTCAGAC+GGG - chr2_1:55446466-55446485 None:intergenic 30.0%
! GCTTTAAGCTTATCATTCAA+TGG + chr2_1:55446562-55446581 Msa0212990:intron 30.0%
!! GGTCATTCTAGAATATAAAG+TGG + chr2_1:55446613-55446632 Msa0212990:intron 30.0%
! AAATTTAGGAGAGTAATGGA+TGG + chr2_1:55446768-55446787 Msa0212990:intron 30.0%
ACAGTTCAATTGAATGTTTC+AGG + chr2_1:55447081-55447100 Msa0212990:intron 30.0%
ACAAAAGACGGATATACAAT+AGG - chr2_1:55447310-55447329 None:intergenic 30.0%
AAATCAGAACTAATCTGAAC+TGG - chr2_1:55447904-55447923 None:intergenic 30.0%
TTGCTACCACTTCATTATAT+TGG + chr2_1:55448102-55448121 Msa0212990:intron 30.0%
! GGATTTTGTCTTGAGTATAT+GGG + chr2_1:55448344-55448363 Msa0212990:intron 30.0%
AACAGAATACATAGCATATG+CGG - chr2_1:55448580-55448599 None:intergenic 30.0%
GTATTCTGTTCAAGTAAAAG+TGG + chr2_1:55448590-55448609 Msa0212990:CDS 30.0%
TGAAAGAAATGCAAGGTTTA+TGG - chr2_1:55448637-55448656 None:intergenic 30.0%
! TGTCATTTGAAAGAAATGCA+AGG - chr2_1:55448644-55448663 None:intergenic 30.0%
!!! CAGTTTTGAAAAAGGAATAC+CGG + chr2_1:55448994-55449013 Msa0212990:CDS 30.0%
! TAACGATGAATACCTTTTTC+CGG - chr2_1:55449016-55449035 None:intergenic 30.0%
! GTATTAACTAGCTGACTTAA+TGG + chr2_1:55449157-55449176 Msa0212990:intron 30.0%
TGATGAAAATGATAACAAGC+TGG - chr2_1:55449385-55449404 None:intergenic 30.0%
GTGCATCCTGATAAAAATAT+GGG + chr2_1:55449419-55449438 Msa0212990:CDS 30.0%
AAGTTTCATCCTTGTTAAAG+AGG - chr2_1:55449613-55449632 None:intergenic 30.0%
!! AAAAAAAGGTACTCTATTGC+AGG + chr2_1:55449939-55449958 Msa0212990:intron 30.0%
GAAATTAAGAGAAAGAAGGA+AGG - chr2_1:55450115-55450134 None:intergenic 30.0%
GCATGAAATTAAGAGAAAGA+AGG - chr2_1:55450119-55450138 None:intergenic 30.0%
TCAATGCAAATCCAATCAAA+TGG - chr2_1:55450707-55450726 None:intergenic 30.0%
ATGAAATAAAGTAGGTTGTC+AGG - chr2_1:55450772-55450791 None:intergenic 30.0%
! AACCTACTTTATTTCATGCA+GGG + chr2_1:55450775-55450794 Msa0212990:intron 30.0%
!!! TTCTTTTGAGGCAATTTGAA+TGG - chr2_1:55451015-55451034 None:intergenic 30.0%
TTCAAATTGCCTCAAAAGAA+AGG + chr2_1:55451015-55451034 Msa0212990:CDS 30.0%
TCAAATTGCCTCAAAAGAAA+GGG + chr2_1:55451016-55451035 Msa0212990:CDS 30.0%
AAAAGAAAGGGAAAAAGCAA+TGG + chr2_1:55451028-55451047 Msa0212990:CDS 30.0%
TTTGTTTAAGAAACCCGAAA+TGG + chr2_1:55451136-55451155 Msa0212990:three_prime_UTR 30.0%
TTGATCTCAGTAATCCATTT+CGG - chr2_1:55451153-55451172 None:intergenic 30.0%
TTACTGAGATCAAAACTAGA+AGG + chr2_1:55451160-55451179 Msa0212990:three_prime_UTR 30.0%
! TATCAAAAGTGCAAAAACCT+AGG + chr2_1:55451302-55451321 Msa0212990:three_prime_UTR 30.0%
GTTACTCACATTGATCATTA+AGG + chr2_1:55451334-55451353 Msa0212990:three_prime_UTR 30.0%
!!! AGAAAGTGCTCTTTTCAATA+TGG + chr2_1:55451431-55451450 Msa0212990:three_prime_UTR 30.0%
! TGGTTACTAAGGATTTCTTT+TGG + chr2_1:55451451-55451470 Msa0212990:three_prime_UTR 30.0%
! GTTTTGTAAAGAGAGGAGTA+AGG - chr2_1:55445253-55445272 None:intergenic 35.0%
! CCCTCTTTCAATCAGATTTT+AGG + chr2_1:55445472-55445491 Msa0212990:five_prime_UTR 35.0%
CCCTAAAATCTGATTGAAAG+AGG - chr2_1:55445476-55445495 None:intergenic 35.0%
TTAAACTGGTAAAAGGGTCA+AGG + chr2_1:55445571-55445590 Msa0212990:five_prime_UTR 35.0%
! TGTGTTTTGTGAAAAAGGGA+TGG + chr2_1:55445653-55445672 Msa0212990:five_prime_UTR 35.0%
!! GAGAGTATTTAGTGGTATCA+TGG + chr2_1:55445777-55445796 Msa0212990:five_prime_UTR 35.0%
CAAAAGGGTCATTGGATTTA+TGG + chr2_1:55445997-55446016 Msa0212990:five_prime_UTR 35.0%
TTTGTAAGTGGAATCTGTAG+AGG + chr2_1:55446093-55446112 Msa0212990:five_prime_UTR 35.0%
TAGGGTTGTTCAATCAAGTT+TGG + chr2_1:55446134-55446153 Msa0212990:CDS 35.0%
AGGGTTGTTCAATCAAGTTT+GGG + chr2_1:55446135-55446154 Msa0212990:CDS 35.0%
TGATGCTCTTGCTTATAATG+TGG + chr2_1:55446365-55446384 Msa0212990:CDS 35.0%
TGTGAGAAGCAATGTATTCT+TGG - chr2_1:55447064-55447083 None:intergenic 35.0%
AATACTTGGGTTATACTCCT+GGG + chr2_1:55447125-55447144 Msa0212990:CDS 35.0%
TGGCATACATCCACAAAATA+AGG - chr2_1:55447177-55447196 None:intergenic 35.0%
TAATCCTGTGATCAGAAAGT+TGG - chr2_1:55447197-55447216 None:intergenic 35.0%
ACAGGATTACTACTCATAGT+TGG + chr2_1:55447208-55447227 Msa0212990:CDS 35.0%
TAGTGACCATAAAAGAAGAG+AGG + chr2_1:55447279-55447298 Msa0212990:intron 35.0%
! GCATATCCTCTCTTCTTTTA+TGG - chr2_1:55447288-55447307 None:intergenic 35.0%
ACTCCACTATCAAAATTGTG+AGG + chr2_1:55447339-55447358 Msa0212990:intron 35.0%
ATCTCATAGGTAATCCAACA+CGG - chr2_1:55447406-55447425 None:intergenic 35.0%
TGTTGGATTACCTATGAGAT+CGG + chr2_1:55447406-55447425 Msa0212990:intron 35.0%
AAATCCTACCTAGGATAATG+AGG - chr2_1:55447984-55448003 None:intergenic 35.0%
CAACGACCAATATAATGAAG+TGG - chr2_1:55448111-55448130 None:intergenic 35.0%
AAATAGAAGCTAAGCCTCTT+TGG - chr2_1:55448164-55448183 None:intergenic 35.0%
! GGGATTTTGTCTTGAGTATA+TGG + chr2_1:55448343-55448362 Msa0212990:intron 35.0%
! AGTACACAAGAAAGGCATAT+GGG - chr2_1:55448375-55448394 None:intergenic 35.0%
! TAGTACACAAGAAAGGCATA+TGG - chr2_1:55448376-55448395 None:intergenic 35.0%
! AAGAGTGTAGTACACAAGAA+AGG - chr2_1:55448383-55448402 None:intergenic 35.0%
AGAAGTGAGAACACTGTAAT+GGG - chr2_1:55448447-55448466 None:intergenic 35.0%
AATTCTCAGATTCAACTGGT+GGG - chr2_1:55448785-55448804 None:intergenic 35.0%
AAATTCTCAGATTCAACTGG+TGG - chr2_1:55448786-55448805 None:intergenic 35.0%
TGCAAATTCTCAGATTCAAC+TGG - chr2_1:55448789-55448808 None:intergenic 35.0%
! TGTCTGCTCTTTTACAACTT+TGG - chr2_1:55448886-55448905 None:intergenic 35.0%
CTTAATCATTATGATGCCCT+TGG + chr2_1:55448942-55448961 Msa0212990:CDS 35.0%
GAAAAAGGAATACCGGAAAA+AGG + chr2_1:55449001-55449020 Msa0212990:CDS 35.0%
ATATTTAGCGCAACATTGCA+AGG - chr2_1:55449117-55449136 None:intergenic 35.0%
CGTGCATCCTGATAAAAATA+TGG + chr2_1:55449418-55449437 Msa0212990:CDS 35.0%
!! GAACTGCCCATATTTTTATC+AGG - chr2_1:55449428-55449447 None:intergenic 35.0%
GAAACTTCAATGTGCATATG+AGG + chr2_1:55449469-55449488 Msa0212990:CDS 35.0%
! CACTGTTTTCCTCTTTAACA+AGG + chr2_1:55449601-55449620 Msa0212990:intron 35.0%
TTAACAAGGATGAAACTTCC+AGG + chr2_1:55449615-55449634 Msa0212990:intron 35.0%
CTTATGATTCTTCAAACTCG+TGG - chr2_1:55449793-55449812 None:intergenic 35.0%
TGCATTGTAATGAACGGATA+TGG - chr2_1:55449880-55449899 None:intergenic 35.0%
TCCTGAATTTACATCTTCTC+TGG + chr2_1:55450153-55450172 Msa0212990:intron 35.0%
TCCAGAGAAGATGTAAATTC+AGG - chr2_1:55450157-55450176 None:intergenic 35.0%
!! AGATGGATGGGTTGAATATA+AGG + chr2_1:55450214-55450233 Msa0212990:CDS 35.0%
!! GATGGATGGGTTGAATATAA+GGG + chr2_1:55450215-55450234 Msa0212990:CDS 35.0%
GGTTGAATATAAGGGATCTT+TGG + chr2_1:55450223-55450242 Msa0212990:CDS 35.0%
GCTTTGATCTTGTCTTTCAT+AGG + chr2_1:55450325-55450344 Msa0212990:intron 35.0%
TGATCAGTGTTGTCAAATAG+CGG + chr2_1:55450470-55450489 Msa0212990:intron 35.0%
! CAACCTACTTTATTTCATGC+AGG + chr2_1:55450774-55450793 Msa0212990:intron 35.0%
TTCCCTGCATGAAATAAAGT+AGG - chr2_1:55450780-55450799 None:intergenic 35.0%
! ACTTTATTTCATGCAGGGAA+TGG + chr2_1:55450780-55450799 Msa0212990:intron 35.0%
ATCTACTTGAGTTACAGGAA+TGG - chr2_1:55450867-55450886 None:intergenic 35.0%
TAACTCAAGTAGATTCCCAT+GGG + chr2_1:55450873-55450892 Msa0212990:CDS 35.0%
GTCTTCATCCATCATCATTT+CGG - chr2_1:55450908-55450927 None:intergenic 35.0%
!!! TGCTTTTTCCCTTTCTTTTG+AGG - chr2_1:55451027-55451046 None:intergenic 35.0%
TCTTGCTGAAAAGCTCAATA+GGG + chr2_1:55451060-55451079 Msa0212990:exon 35.0%
TGATCTCAGTAATCCATTTC+GGG - chr2_1:55451152-55451171 None:intergenic 35.0%
GTAAAGAAAATTGGCAACCT+TGG - chr2_1:55451246-55451265 None:intergenic 35.0%
GTGCAAAAACCTAGGTTTAT+AGG + chr2_1:55451310-55451329 Msa0212990:three_prime_UTR 35.0%
TGAGTAACTCCTATAAACCT+AGG - chr2_1:55451322-55451341 None:intergenic 35.0%
GAGGAAAAGGGGTTTCAAAA+GGG - chr2_1:55445397-55445416 None:intergenic 40.0%
TGAGGAAAAGGGGTTTCAAA+AGG - chr2_1:55445398-55445417 None:intergenic 40.0%
TGGAGCAGAAATGAAGAATG+AGG - chr2_1:55445416-55445435 None:intergenic 40.0%
TAGGGTCGTTGAAAAAGTAG+AGG + chr2_1:55445616-55445635 Msa0212990:five_prime_UTR 40.0%
TAGCATCACAAAAGGGTCAT+TGG + chr2_1:55445989-55446008 Msa0212990:five_prime_UTR 40.0%
GGTCATTGGATTTATGGTGA+TGG + chr2_1:55446003-55446022 Msa0212990:five_prime_UTR 40.0%
!! TCATGGTGATGGAGGATATA+GGG + chr2_1:55446116-55446135 Msa0212990:exon 40.0%
GGGTTGTTCAATCAAGTTTG+GGG + chr2_1:55446136-55446155 Msa0212990:CDS 40.0%
TGTTCAATCAAGTTTGGGGA+TGG + chr2_1:55446140-55446159 Msa0212990:CDS 40.0%
CGATGTTTATTGAACGGCAT+TGG + chr2_1:55446230-55446249 Msa0212990:CDS 40.0%
TCTGACTTCGATGTATTGCT+TGG + chr2_1:55446402-55446421 Msa0212990:CDS 40.0%
! GGTTTACGTGCTTGTTAGTA+TGG + chr2_1:55446423-55446442 Msa0212990:CDS 40.0%
!! TGAATGTTTCAGGTTACTGC+TGG + chr2_1:55447091-55447110 Msa0212990:intron 40.0%
!! GAATGTTTCAGGTTACTGCT+GGG + chr2_1:55447092-55447111 Msa0212990:intron 40.0%
!! AATGTTTCAGGTTACTGCTG+GGG + chr2_1:55447093-55447112 Msa0212990:intron 40.0%
! CAGGAGTATAACCCAAGTAT+TGG - chr2_1:55447126-55447145 None:intergenic 40.0%
CAATACTTGGGTTATACTCC+TGG + chr2_1:55447124-55447143 Msa0212990:CDS 40.0%
TATGCCAACTTTCTGATCAC+AGG + chr2_1:55447190-55447209 Msa0212990:CDS 40.0%
GGATTACTACTCATAGTTGG+AGG + chr2_1:55447211-55447230 Msa0212990:CDS 40.0%
!! GTGCCTCACAATTTTGATAG+TGG - chr2_1:55447345-55447364 None:intergenic 40.0%
AGGTAATCCAACACGGTTTA+GGG - chr2_1:55447399-55447418 None:intergenic 40.0%
TAGGTAATCCAACACGGTTT+AGG - chr2_1:55447400-55447419 None:intergenic 40.0%
GTTGGATTACCTATGAGATC+GGG + chr2_1:55447407-55447426 Msa0212990:intron 40.0%
AACTCAAAATGGTGCTCATC+AGG - chr2_1:55447687-55447706 None:intergenic 40.0%
!!! TGAGCACCATTTTGAGTTTG+TGG + chr2_1:55447689-55447708 Msa0212990:intron 40.0%
!!! GTGGATTTTAAGGCTCTAGA+TGG + chr2_1:55447708-55447727 Msa0212990:intron 40.0%
AGGAGGAAAGCTTGTAACTT+AGG - chr2_1:55447964-55447983 None:intergenic 40.0%
GAGAAGTGAGAACACTGTAA+TGG - chr2_1:55448448-55448467 None:intergenic 40.0%
TGTTTGTCAATCACGAATGC+AGG + chr2_1:55448507-55448526 Msa0212990:intron 40.0%
CTGTTCAAGTAAAAGTGGGA+TGG + chr2_1:55448595-55448614 Msa0212990:CDS 40.0%
GAAATGCAAGGTTTATGGCA+AGG - chr2_1:55448632-55448651 None:intergenic 40.0%
CTGCTTATCAACAACTGATG+TGG - chr2_1:55448847-55448866 None:intergenic 40.0%
!!! CGATGCAGCAGTTTTGAAAA+AGG + chr2_1:55448986-55449005 Msa0212990:CDS 40.0%
!! CTGACTTAATGGGTGTTGTT+TGG + chr2_1:55449168-55449187 Msa0212990:intron 40.0%
GTTCTGTCTAAAAACTGCAG+AGG + chr2_1:55449496-55449515 Msa0212990:intron 40.0%
AGTGCGGTAATTCACATGTT+TGG + chr2_1:55450010-55450029 Msa0212990:CDS 40.0%
GTGCGGTAATTCACATGTTT+GGG + chr2_1:55450011-55450030 Msa0212990:CDS 40.0%
! TTTACATCTTCTCTGGAAGC+AGG + chr2_1:55450160-55450179 Msa0212990:intron 40.0%
CTGTCAGTTTCATCAAGCAA+AGG + chr2_1:55450187-55450206 Msa0212990:CDS 40.0%
CAGTTTCATCAAGCAAAGGA+TGG + chr2_1:55450191-55450210 Msa0212990:CDS 40.0%
!!! AGGGATCTTTGGTTTTTGAC+AGG + chr2_1:55450234-55450253 Msa0212990:CDS 40.0%
!! ATCAGAATGGGCTATATGTC+AGG + chr2_1:55450397-55450416 Msa0212990:intron 40.0%
GCTATTTGACAACACTGATC+AGG - chr2_1:55450471-55450490 None:intergenic 40.0%
TAGCGGCTATATAAACGCTA+TGG + chr2_1:55450577-55450596 Msa0212990:intron 40.0%
TGTTGTCAATCTCAGATCGT+GGG - chr2_1:55450642-55450661 None:intergenic 40.0%
AGTAGACTGAGTACCAAATC+AGG - chr2_1:55450670-55450689 None:intergenic 40.0%
ATCAAATGGAACACTGTCTC+TGG - chr2_1:55450693-55450712 None:intergenic 40.0%
GAGACAGTGTTCCATTTGAT+TGG + chr2_1:55450693-55450712 Msa0212990:intron 40.0%
ACCATGTTTACATGGAAGCT+CGG - chr2_1:55450829-55450848 None:intergenic 40.0%
AGCTTCCATGTAAACATGGT+TGG + chr2_1:55450829-55450848 Msa0212990:CDS 40.0%
TGGGAATCTACTTGAGTTAC+AGG - chr2_1:55450872-55450891 None:intergenic 40.0%
GTAACTCAAGTAGATTCCCA+TGG + chr2_1:55450872-55450891 Msa0212990:CDS 40.0%
AAGTAGATTCCCATGGGATT+TGG + chr2_1:55450879-55450898 Msa0212990:CDS 40.0%
GTCTTGCTGAAAAGCTCAAT+AGG + chr2_1:55451059-55451078 Msa0212990:exon 40.0%
TTTCATTGCCTACATCCCAA+AGG + chr2_1:55451094-55451113 Msa0212990:three_prime_UTR 40.0%
TTCATTGCCTACATCCCAAA+GGG + chr2_1:55451095-55451114 Msa0212990:three_prime_UTR 40.0%
TTACTCCATCCAATCCCTTT+GGG - chr2_1:55451112-55451131 None:intergenic 40.0%
TTTACTCCATCCAATCCCTT+TGG - chr2_1:55451113-55451132 None:intergenic 40.0%
GTGGTGAATTATAAGAGCCA+AGG + chr2_1:55451226-55451245 Msa0212990:three_prime_UTR 40.0%
AGTGGAATCTGTAGAGGTCA+TGG + chr2_1:55446099-55446118 Msa0212990:exon 45.0%
ATCTGTAGAGGTCATGGTGA+TGG + chr2_1:55446105-55446124 Msa0212990:exon 45.0%
!! GTCATGGTGATGGAGGATAT+AGG + chr2_1:55446115-55446134 Msa0212990:exon 45.0%
ATCAAGTTTGGGGATGGCTT+CGG + chr2_1:55446146-55446165 Msa0212990:CDS 45.0%
TTTGGAAGGACTCTGCTGTA+AGG + chr2_1:55446311-55446330 Msa0212990:CDS 45.0%
TTGGAAGGACTCTGCTGTAA+GGG + chr2_1:55446312-55446331 Msa0212990:CDS 45.0%
GACGCTGCCCTTCAAAATTT+AGG + chr2_1:55446754-55446773 Msa0212990:intron 45.0%
! ACTCCTGGGCTTTTTATCGT+AGG + chr2_1:55447139-55447158 Msa0212990:CDS 45.0%
! CTCCTGGGCTTTTTATCGTA+GGG + chr2_1:55447140-55447159 Msa0212990:CDS 45.0%
! TTTTTGCCCCTAAACCGTGT+TGG + chr2_1:55447389-55447408 Msa0212990:intron 45.0%
GGTAATCCAACACGGTTTAG+GGG - chr2_1:55447398-55447417 None:intergenic 45.0%
TGTTTAAGCTCAGCTTGCCA+AGG - chr2_1:55447494-55447513 None:intergenic 45.0%
CACGACGTGATGTAAGTGTA+TGG - chr2_1:55447570-55447589 None:intergenic 45.0%
TACACTTACATCACGTCGTG+TGG + chr2_1:55447570-55447589 Msa0212990:intron 45.0%
TGACCTTCTTTCCCTTTGCT+TGG + chr2_1:55447648-55447667 Msa0212990:intron 45.0%
ATACAACGGCACCAAGCAAA+GGG - chr2_1:55447662-55447681 None:intergenic 45.0%
GTGCTCATCAGGTGATACAA+CGG - chr2_1:55447676-55447695 None:intergenic 45.0%
GCTTTCCTCCTCATTATCCT+AGG + chr2_1:55447973-55447992 Msa0212990:CDS 45.0%
TCCTCCTCATTATCCTAGGT+AGG + chr2_1:55447977-55447996 Msa0212990:intron 45.0%
TCCTACCTAGGATAATGAGG+AGG - chr2_1:55447981-55448000 None:intergenic 45.0%
AAGCTAAGCCTCTTTGGTTG+GGG - chr2_1:55448158-55448177 None:intergenic 45.0%
GAAGCTAAGCCTCTTTGGTT+GGG - chr2_1:55448159-55448178 None:intergenic 45.0%
AGAAGCTAAGCCTCTTTGGT+TGG - chr2_1:55448160-55448179 None:intergenic 45.0%
! GCACGCTTGGTGGTATTAAT+TGG + chr2_1:55448552-55448571 Msa0212990:CDS 45.0%
CAAGTAAAAGTGGGATGGCT+TGG + chr2_1:55448600-55448619 Msa0212990:CDS 45.0%
TCCTGAAGAGCAGAAGCAAT+CGG + chr2_1:55448713-55448732 Msa0212990:CDS 45.0%
GAAGCAATCGGAGACAGTTA+TGG + chr2_1:55448725-55448744 Msa0212990:CDS 45.0%
TCAGATTCAACTGGTGGGAT+AGG - chr2_1:55448780-55448799 None:intergenic 45.0%
TTTGTGGCGGCTAAATCCAA+GGG - chr2_1:55448961-55448980 None:intergenic 45.0%
! TTTTGTGGCGGCTAAATCCA+AGG - chr2_1:55448962-55448981 None:intergenic 45.0%
!! CTGCATCGATCTTTTTGTGG+CGG - chr2_1:55448974-55448993 None:intergenic 45.0%
!! CTGCTGCATCGATCTTTTTG+TGG - chr2_1:55448977-55448996 None:intergenic 45.0%
TTTAGCGCAACATTGCAAGG+TGG - chr2_1:55449114-55449133 None:intergenic 45.0%
TCACAGAGTCAGAAAGAACC+TGG - chr2_1:55449636-55449655 None:intergenic 45.0%
TACCTGATGTGAACTGCTGT+GGG - chr2_1:55449725-55449744 None:intergenic 45.0%
TTACCTGATGTGAACTGCTG+TGG - chr2_1:55449726-55449745 None:intergenic 45.0%
ATCGTTCCGAAGAATCCAGA+CGG + chr2_1:55449974-55449993 Msa0212990:CDS 45.0%
CTGTATCCGTCTGGATTCTT+CGG - chr2_1:55449983-55450002 None:intergenic 45.0%
ATGTTTGGGTATGCACCAAC+AGG + chr2_1:55450025-55450044 Msa0212990:CDS 45.0%
CATCAAGCAAAGGATGGAGA+TGG + chr2_1:55450197-55450216 Msa0212990:CDS 45.0%
AAGCAAAGGATGGAGATGGA+TGG + chr2_1:55450201-55450220 Msa0212990:CDS 45.0%
AGCAAAGGATGGAGATGGAT+GGG + chr2_1:55450202-55450221 Msa0212990:CDS 45.0%
ATAGCTGTGCTACAACGTAG+CGG + chr2_1:55450495-55450514 Msa0212990:intron 45.0%
TCTCAGATCGTGGGAAATAG+CGG - chr2_1:55450633-55450652 None:intergenic 45.0%
GTGTTGTCAATCTCAGATCG+TGG - chr2_1:55450643-55450662 None:intergenic 45.0%
! CGATCTGAGATTGACAACAC+TGG + chr2_1:55450643-55450662 Msa0212990:intron 45.0%
TGACAACACTGGACCTGATT+TGG + chr2_1:55450654-55450673 Msa0212990:intron 45.0%
AGGTTGTCAGGTACAGAAAG+TGG - chr2_1:55450760-55450779 None:intergenic 45.0%
TGTTTACATGGAAGCTCGGT+CGG - chr2_1:55450825-55450844 None:intergenic 45.0%
ACCGAGCTTCCATGTAAACA+TGG + chr2_1:55450825-55450844 Msa0212990:CDS 45.0%
CCAAGCCAACCATGTTTACA+TGG - chr2_1:55450837-55450856 None:intergenic 45.0%
! CCATGTAAACATGGTTGGCT+TGG + chr2_1:55450834-55450853 Msa0212990:CDS 45.0%
TTTGGACGCCGAAATGATGA+TGG + chr2_1:55450897-55450916 Msa0212990:CDS 45.0%
!! GATGATGGATGAAGACGAAG+AGG + chr2_1:55450912-55450931 Msa0212990:CDS 45.0%
ATTTGACCTGTGGCTTCAAC+AGG + chr2_1:55450936-55450955 Msa0212990:CDS 45.0%
! CTTCAACAGGCTTTAGCATC+TGG + chr2_1:55450949-55450968 Msa0212990:CDS 45.0%
!! ATCCAATCCCTTTGGGATGT+AGG - chr2_1:55451105-55451124 None:intergenic 45.0%
TACATCCCAAAGGGATTGGA+TGG + chr2_1:55451104-55451123 Msa0212990:three_prime_UTR 45.0%
!! GATGAGTCATGAGAGCATTG+TGG + chr2_1:55451207-55451226 Msa0212990:three_prime_UTR 45.0%
!! TGTAGAGGTCATGGTGATGG+AGG + chr2_1:55446108-55446127 Msa0212990:exon 50.0%
GGTCACGAAAAGATGCCTGT+TGG + chr2_1:55446167-55446186 Msa0212990:CDS 50.0%
!! TATTGAACGGCATTGGCCGA+TGG + chr2_1:55446237-55446256 Msa0212990:CDS 50.0%
ATGCAGGGGTTGCTCGAAAT+TGG + chr2_1:55446261-55446280 Msa0212990:CDS 50.0%
TGCAGGGGTTGCTCGAAATT+GGG + chr2_1:55446262-55446281 Msa0212990:CDS 50.0%
TGGAAGGACTCTGCTGTAAG+GGG + chr2_1:55446313-55446332 Msa0212990:CDS 50.0%
TGGGGTTGCTGTCCAATACT+TGG + chr2_1:55447111-55447130 Msa0212990:CDS 50.0%
GGGGTTGCTGTCCAATACTT+GGG + chr2_1:55447112-55447131 Msa0212990:CDS 50.0%
AGCCCTACGATAAAAAGCCC+AGG - chr2_1:55447145-55447164 None:intergenic 50.0%
CTATGAGATCGGGAGCTGTT+GGG + chr2_1:55447417-55447436 Msa0212990:intron 50.0%
TCCAGGATCATTCGATGCGA+TGG - chr2_1:55447467-55447486 None:intergenic 50.0%
TCGCATCGAATGATCCTGGA+CGG + chr2_1:55447467-55447486 Msa0212990:intron 50.0%
TTCTTCATCGTCACACCTCG+TGG + chr2_1:55447596-55447615 Msa0212990:intron 50.0%
CAAAGGGAAAGAAGGTCACG+CGG - chr2_1:55447646-55447665 None:intergenic 50.0%
GCACCAAGCAAAGGGAAAGA+AGG - chr2_1:55447654-55447673 None:intergenic 50.0%
GATACAACGGCACCAAGCAA+AGG - chr2_1:55447663-55447682 None:intergenic 50.0%
TCCTACTCGAGACTGTAGCA+CGG - chr2_1:55448030-55448049 None:intergenic 50.0%
CTATTTCCCCCCAACCAAAG+AGG + chr2_1:55448147-55448166 Msa0212990:intron 50.0%
AGCTAAGCCTCTTTGGTTGG+GGG - chr2_1:55448157-55448176 None:intergenic 50.0%
CACCAAGCGTGCACGATTTA+GGG - chr2_1:55448544-55448563 None:intergenic 50.0%
TCCGATTGCTTCTGCTCTTC+AGG - chr2_1:55448717-55448736 None:intergenic 50.0%
ACAACTGATGTGGTGACAGC+AGG - chr2_1:55448837-55448856 None:intergenic 50.0%
GTGAACTGCTGTGGGATTTC+TGG - chr2_1:55449717-55449736 None:intergenic 50.0%
ATCCCACAGCAGTTCACATC+AGG + chr2_1:55449720-55449739 Msa0212990:CDS 50.0%
CTTTGTGCACTGTATCCGTC+TGG - chr2_1:55449992-55450011 None:intergenic 50.0%
CGGATACAGTGCACAAAGTG+CGG + chr2_1:55449994-55450013 Msa0212990:CDS 50.0%
GACCTGACACCATCTTGCTT+TGG - chr2_1:55450058-55450077 None:intergenic 50.0%
! CCGCACAAACAAAAGCACGT+GGG - chr2_1:55450358-55450377 None:intergenic 50.0%
!! CCCACGTGCTTTTGTTTGTG+CGG + chr2_1:55450355-55450374 Msa0212990:intron 50.0%
! TCCGCACAAACAAAAGCACG+TGG - chr2_1:55450359-55450378 None:intergenic 50.0%
! TCATGCAGGGAATGGCTTGT+AGG + chr2_1:55450788-55450807 Msa0212990:intron 50.0%
TTTCGGCGTCCAAATCCCAT+GGG - chr2_1:55450891-55450910 None:intergenic 50.0%
ATTTCGGCGTCCAAATCCCA+TGG - chr2_1:55450892-55450911 None:intergenic 50.0%
!! ACGAAGAGGCATTTGACCTG+TGG + chr2_1:55450926-55450945 Msa0212990:CDS 50.0%
CTAAAGCCTGTTGAAGCCAC+AGG - chr2_1:55450945-55450964 None:intergenic 50.0%
TTTGCGAGTCCTCAAAACGC+AGG + chr2_1:55450977-55450996 Msa0212990:CDS 50.0%
! CCAACTCTTCCTGCGTTTTG+AGG - chr2_1:55450989-55451008 None:intergenic 50.0%
CCTCAAAACGCAGGAAGAGT+TGG + chr2_1:55450986-55451005 Msa0212990:CDS 50.0%
TGCCTACATCCCAAAGGGAT+TGG + chr2_1:55451100-55451119 Msa0212990:three_prime_UTR 50.0%
! GCATTGGCCGATGGTATGCA+GGG + chr2_1:55446246-55446265 Msa0212990:CDS 55.0%
CATTGGCCGATGGTATGCAG+GGG + chr2_1:55446247-55446266 Msa0212990:CDS 55.0%
GAGCAACCCCTGCATACCAT+CGG - chr2_1:55446256-55446275 None:intergenic 55.0%
GCAGGGGTTGCTCGAAATTG+GGG + chr2_1:55446263-55446282 Msa0212990:CDS 55.0%
GGAAGGACTCTGCTGTAAGG+GGG + chr2_1:55446314-55446333 Msa0212990:CDS 55.0%
CCAACAGCTCCCGATCTCAT+AGG - chr2_1:55447419-55447438 None:intergenic 55.0%
CCTATGAGATCGGGAGCTGT+TGG + chr2_1:55447416-55447435 Msa0212990:intron 55.0%
GCCATCGCATCGAATGATCC+TGG + chr2_1:55447463-55447482 Msa0212990:intron 55.0%
CGCATCGAATGATCCTGGAC+GGG + chr2_1:55447468-55447487 Msa0212990:intron 55.0%
! AAACACCCCCCTTTTCCCTG+TGG + chr2_1:55447509-55447528 Msa0212990:intron 55.0%
TCCGTGCTACAGTCTCGAGT+AGG + chr2_1:55448026-55448045 Msa0212990:intron 55.0%
GCTAAGCCTCTTTGGTTGGG+GGG - chr2_1:55448156-55448175 None:intergenic 55.0%
CTCCCTAAATCGTGCACGCT+TGG + chr2_1:55448539-55448558 Msa0212990:CDS 55.0%
CCACCAAGCGTGCACGATTT+AGG - chr2_1:55448545-55448564 None:intergenic 55.0%
CCTAAATCGTGCACGCTTGG+TGG + chr2_1:55448542-55448561 Msa0212990:CDS 55.0%
GGTGACAGCAGGTGGTTTAC+TGG - chr2_1:55448826-55448845 None:intergenic 55.0%
ACTGATGTGGTGACAGCAGG+TGG - chr2_1:55448834-55448853 None:intergenic 55.0%
! CTGGCACACGCTTTTAGCCA+TGG - chr2_1:55449698-55449717 None:intergenic 55.0%
GGTATGCACCAACAGGAGCA+AGG + chr2_1:55450032-55450051 Msa0212990:CDS 55.0%
!! TGCTTTGGCCTTGCTCCTGT+TGG - chr2_1:55450043-55450062 None:intergenic 55.0%
GGAGCAAGGCCAAAGCAAGA+TGG + chr2_1:55450046-55450065 Msa0212990:CDS 55.0%
GGCCAAAGCAAGATGGTGTC+AGG + chr2_1:55450053-55450072 Msa0212990:CDS 55.0%
!! TATGGTGCTGTAGCGCGTAG+TGG + chr2_1:55450595-55450614 Msa0212990:intron 55.0%
TACATGGAAGCTCGGTCGGT+GGG - chr2_1:55450821-55450840 None:intergenic 55.0%
TTACATGGAAGCTCGGTCGG+TGG - chr2_1:55450822-55450841 None:intergenic 55.0%
CACAGTTCGAGCACGCCAAC+AGG - chr2_1:55446185-55446204 None:intergenic 60.0%
CTGTTGGCGTGCTCGAACTG+TGG + chr2_1:55446183-55446202 Msa0212990:CDS 60.0%
!! GGCATTGGCCGATGGTATGC+AGG + chr2_1:55446245-55446264 Msa0212990:CDS 60.0%
GAATGATCCTGGACGGGCCT+TGG + chr2_1:55447474-55447493 Msa0212990:intron 60.0%
!! TGGGGGTGCCACAGGGAAAA+GGG - chr2_1:55447520-55447539 None:intergenic 60.0%
AGAGTCTGCGCACAGAGGCA+GGG - chr2_1:55447546-55447565 None:intergenic 60.0%
ATGGCAGAGTCTGCGCACAG+AGG - chr2_1:55447551-55447570 None:intergenic 60.0%
AAGCTCGGTCGGTGGGTGTT+AGG - chr2_1:55450814-55450833 None:intergenic 60.0%
! GGGTGCCACAGGGAAAAGGG+GGG - chr2_1:55447517-55447536 None:intergenic 65.0%
! GGGGTGCCACAGGGAAAAGG+GGG - chr2_1:55447518-55447537 None:intergenic 65.0%
!! GGGGGTGCCACAGGGAAAAG+GGG - chr2_1:55447519-55447538 None:intergenic 65.0%
!! CTGGGGGTGCCACAGGGAAA+AGG - chr2_1:55447521-55447540 None:intergenic 65.0%
! CTTTTCCCTGTGGCACCCCC+AGG + chr2_1:55447519-55447538 Msa0212990:intron 65.0%
GAGTCTGCGCACAGAGGCAG+GGG - chr2_1:55447545-55447564 None:intergenic 65.0%
CAGAGTCTGCGCACAGAGGC+AGG - chr2_1:55447547-55447566 None:intergenic 65.0%
CACCTCGTGGCCAATCCCTC+CGG + chr2_1:55447609-55447628 Msa0212990:intron 65.0%
CTAGAGTCCGCCGGAGGGAT+TGG - chr2_1:55447622-55447641 None:intergenic 65.0%
! CAATCCCTCCGGCGGACTCT+AGG + chr2_1:55447620-55447639 Msa0212990:intron 65.0%
CAGCTTGCCAAGGCCCGTCC+AGG - chr2_1:55447484-55447503 None:intergenic 70.0%
CTCGTGGCCAATCCCTCCGG+CGG + chr2_1:55447612-55447631 Msa0212990:intron 70.0%
TCACGCGGCCTAGAGTCCGC+CGG - chr2_1:55447631-55447650 None:intergenic 70.0%
!! AGGGGCCTGGGGGTGCCACA+GGG - chr2_1:55447527-55447546 None:intergenic 75.0%
GCACAGAGGCAGGGGCCTGG+GGG - chr2_1:55447537-55447556 None:intergenic 75.0%
CGCACAGAGGCAGGGGCCTG+GGG - chr2_1:55447538-55447557 None:intergenic 75.0%
GCGCACAGAGGCAGGGGCCT+GGG - chr2_1:55447539-55447558 None:intergenic 75.0%
TGCGCACAGAGGCAGGGGCC+TGG - chr2_1:55447540-55447559 None:intergenic 75.0%
!! CGCCGGAGGGATTGGCCACG+AGG - chr2_1:55447614-55447633 None:intergenic 75.0%
GCGGCCTAGAGTCCGCCGGA+GGG - chr2_1:55447627-55447646 None:intergenic 75.0%
!!! CAGGGGCCTGGGGGTGCCAC+AGG - chr2_1:55447528-55447547 None:intergenic 80.0%
! CGCGGCCTAGAGTCCGCCGG+AGG - chr2_1:55447628-55447647 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 55445230 55451557 55445230 ID=Msa0212990;Name=Msa0212990
chr2_1 mRNA 55445230 55451557 55445230 ID=Msa0212990-mRNA-1;Parent=Msa0212990;Name=Msa0212990-mRNA-1;_AED=0.11;_eAED=0.11;_QI=888|0.62|0.88|0.88|1|1|9|489|565
chr2_1 exon 55445230 55446444 55445230 ID=Msa0212990-mRNA-1:exon:15376;Parent=Msa0212990-mRNA-1
chr2_1 exon 55447103 55447232 55447103 ID=Msa0212990-mRNA-1:exon:15377;Parent=Msa0212990-mRNA-1
chr2_1 exon 55447905 55447994 55447905 ID=Msa0212990-mRNA-1:exon:15378;Parent=Msa0212990-mRNA-1
chr2_1 exon 55448529 55449022 55448529 ID=Msa0212990-mRNA-1:exon:15379;Parent=Msa0212990-mRNA-1
chr2_1 exon 55449410 55449490 55449410 ID=Msa0212990-mRNA-1:exon:15380;Parent=Msa0212990-mRNA-1
chr2_1 exon 55449637 55449741 55449637 ID=Msa0212990-mRNA-1:exon:15381;Parent=Msa0212990-mRNA-1
chr2_1 exon 55449961 55450074 55449961 ID=Msa0212990-mRNA-1:exon:15382;Parent=Msa0212990-mRNA-1
chr2_1 exon 55450182 55450265 55450182 ID=Msa0212990-mRNA-1:exon:15383;Parent=Msa0212990-mRNA-1
chr2_1 exon 55450796 55451557 55450796 ID=Msa0212990-mRNA-1:exon:15384;Parent=Msa0212990-mRNA-1
chr2_1 five_prime_UTR 55445230 55446117 55445230 ID=Msa0212990-mRNA-1:five_prime_utr;Parent=Msa0212990-mRNA-1
chr2_1 CDS 55446118 55446444 55446118 ID=Msa0212990-mRNA-1:cds;Parent=Msa0212990-mRNA-1
chr2_1 CDS 55447103 55447232 55447103 ID=Msa0212990-mRNA-1:cds;Parent=Msa0212990-mRNA-1
chr2_1 CDS 55447905 55447994 55447905 ID=Msa0212990-mRNA-1:cds;Parent=Msa0212990-mRNA-1
chr2_1 CDS 55448529 55449022 55448529 ID=Msa0212990-mRNA-1:cds;Parent=Msa0212990-mRNA-1
chr2_1 CDS 55449410 55449490 55449410 ID=Msa0212990-mRNA-1:cds;Parent=Msa0212990-mRNA-1
chr2_1 CDS 55449637 55449741 55449637 ID=Msa0212990-mRNA-1:cds;Parent=Msa0212990-mRNA-1
chr2_1 CDS 55449961 55450074 55449961 ID=Msa0212990-mRNA-1:cds;Parent=Msa0212990-mRNA-1
chr2_1 CDS 55450182 55450265 55450182 ID=Msa0212990-mRNA-1:cds;Parent=Msa0212990-mRNA-1
chr2_1 CDS 55450796 55451068 55450796 ID=Msa0212990-mRNA-1:cds;Parent=Msa0212990-mRNA-1
chr2_1 three_prime_UTR 55451069 55451557 55451069 ID=Msa0212990-mRNA-1:three_prime_utr;Parent=Msa0212990-mRNA-1
Gene Sequence

>Msa0212990

ATGGTGATGGAGGATATAGGGTTGTTCAATCAAGTTTGGGGATGGCTTCGGTCACGAAAAGATGCCTGTTGGCGTGCTCGAACTGTGGTGTTTTGTTGTAGAGACAAAACTGCGATGTTTATTGAACGGCATTGGCCGATGGTATGCAGGGGTTGCTCGAAATTGGGGAGCTTACTTACATTATCGTTGATTTTTTGGAAGGACTCTGCTGTAAGGGGGTTTCAGTCTTTCATTAAGTTTGGTTCAGTGATGCTCTTGCTTATAATGTGGAGCTGCTTTCTTAGTCTGACTTCGATGTATTGCTTGGTTTACGTGCTTGTTAGTATGGTTACTGCTGGGGTTGCTGTCCAATACTTGGGTTATACTCCTGGGCTTTTTATCGTAGGGCTTTTTGCTATCCTTATTTTGTGGATGTATGCCAACTTTCTGATCACAGGATTACTACTCATAGTTGGAGTTCAGATTAGTTCTGATTTGTATTTTAAGCAGGATCATATGATCTGTGCTACAGTTCCTAAGTTACAAGCTTTCCTCCTCATTATCCTAGGTTGCTTGTTCTCCCTAAATCGTGCACGCTTGGTGGTATTAATTGGAACCGCATATGCTATGTATTCTGTTCAAGTAAAAGTGGGATGGCTTGGCGTTTTCCTTGCCATAAACCTTGCATTTCTTTCAAATGACATTTTGAATTTTCTGCTTCAATGGTTTGATAATGTGAGTGAAAGTTCGCATCCTGAAGAGCAGAAGCAATCGGAGACAGTTATGGAAGACGACTTCGCTGAAGAGTGTGAATATCCTATCCCACCAGTTGAATCTGAGAATTTGCATTCATGCAAATCATCCAGTAAACCACCTGCTGTCACCACATCAGTTGTTGATAAGCAGAAAGAAATTTTGGTTACCAAAGTTGTAAAAGAGCAGACAAATTCAATTGATGAAATGAGAAGGATATTGAAGAGTCTTAATCATTATGATGCCCTTGGATTTAGCCGCCACAAAAAGATCGATGCAGCAGTTTTGAAAAAGGAATACCGGAAAAAGGCTATGCTCGTGCATCCTGATAAAAATATGGGCAGTTCTATGTCAAGCGAGTCATTCAAGAAACTTCAATGTGCATATGAGGTTCTTTCTGACTCTGTGAAGAAGCGAGACTATGATGAACAATTAAGAAAAGAAGAATCCATGGCTAAAAGCGTGTGCCAGAAATCCCACAGCAGTTCACATCAGGATAATACTGAATATCGTTCCGAAGAATCCAGACGGATACAGTGCACAAAGTGCGGTAATTCACATGTTTGGGTATGCACCAACAGGAGCAAGGCCAAAGCAAGATGGTGTCAGGATTGCTGTCAGTTTCATCAAGCAAAGGATGGAGATGGATGGGTTGAATATAAGGGATCTTTGGTTTTTGACAGGACTCAAAAAGGAATGGCTTGTAGGCCTAACACCCACCGACCGAGCTTCCATGTAAACATGGTTGGCTTGGAGAAAAGCCATTCCTGTAACTCAAGTAGATTCCCATGGGATTTGGACGCCGAAATGATGATGGATGAAGACGAAGAGGCATTTGACCTGTGGCTTCAACAGGCTTTAGCATCTGGTCTCTTTTGCGAGTCCTCAAAACGCAGGAAGAGTTGGAGTCCATTCAAATTGCCTCAAAAGAAAGGGAAAAAGCAATGGCGAAGAACGTCTTGCTGA

Protein sequence

>Msa0212990

MVMEDIGLFNQVWGWLRSRKDACWRARTVVFCCRDKTAMFIERHWPMVCRGCSKLGSLLTLSLIFWKDSAVRGFQSFIKFGSVMLLLIMWSCFLSLTSMYCLVYVLVSMVTAGVAVQYLGYTPGLFIVGLFAILILWMYANFLITGLLLIVGVQISSDLYFKQDHMICATVPKLQAFLLIILGCLFSLNRARLVVLIGTAYAMYSVQVKVGWLGVFLAINLAFLSNDILNFLLQWFDNVSESSHPEEQKQSETVMEDDFAEECEYPIPPVESENLHSCKSSSKPPAVTTSVVDKQKEILVTKVVKEQTNSIDEMRRILKSLNHYDALGFSRHKKIDAAVLKKEYRKKAMLVHPDKNMGSSMSSESFKKLQCAYEVLSDSVKKRDYDEQLRKEESMAKSVCQKSHSSSHQDNTEYRSEESRRIQCTKCGNSHVWVCTNRSKAKARWCQDCCQFHQAKDGDGWVEYKGSLVFDRTQKGMACRPNTHRPSFHVNMVGLEKSHSCNSSRFPWDLDAEMMMDEDEEAFDLWLQQALASGLFCESSKRRKSWSPFKLPQKKGKKQWRRTSC*