Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0101340 | XP_013466045.1 | 97.820 | 367 | 8 | 0 | 1 | 367 | 1 | 367 | 0.0 | 745 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0101340 | sp|Q9S7G2|GATL2_ARATH | 68.539 | 356 | 87 | 6 | 13 | 365 | 5 | 338 | 2.61e-177 | 498 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0101340 | A0A072VDI5 | 97.820 | 367 | 8 | 0 | 1 | 367 | 1 | 367 | 0.0 | 745 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0036890 | Msa0101340 | 0.871802 | 5.176771e-67 | -8.615850e-47 |
| Msa0050950 | Msa0101340 | 0.902620 | 8.046634e-79 | -8.615850e-47 |
| Msa0084970 | Msa0101340 | 0.881456 | 2.364639e-70 | -8.615850e-47 |
| Msa0101340 | Msa0130990 | 0.838275 | 3.167327e-57 | -8.615850e-47 |
| Msa0101340 | Msa0145680 | 0.993319 | 6.456056e-199 | -8.615850e-47 |
| Msa0101340 | Msa0176900 | 0.862120 | 6.347862e-64 | -8.615850e-47 |
| Msa0101340 | Msa0327670 | 0.808387 | 3.175278e-50 | -8.615850e-47 |
| Msa0101340 | Msa0389500 | 0.827554 | 1.467424e-54 | -8.615850e-47 |
| Msa0101340 | Msa0519760 | 0.819574 | 1.081343e-52 | -8.615850e-47 |
| Msa0101340 | Msa0519810 | 0.807346 | 5.287074e-50 | -8.615850e-47 |
| Msa0101340 | Msa0519840 | 0.818359 | 2.043029e-52 | -8.615850e-47 |
| Msa0101340 | Msa0528570 | 0.800801 | 1.215632e-48 | -8.615850e-47 |
| Msa0101340 | Msa0679230 | 0.813971 | 1.953881e-51 | -8.615850e-47 |
| Msa0101340 | Msa0783850 | 0.822131 | 2.791418e-53 | -8.615850e-47 |
| Msa0101340 | Msa0818710 | 0.817899 | 2.595657e-52 | -8.615850e-47 |
| Msa0101340 | Msa0993740 | 0.818875 | 1.560025e-52 | -8.615850e-47 |
| Msa0101340 | Msa1074890 | 0.802827 | 4.663702e-49 | -8.615850e-47 |
| Msa0101340 | Msa1115740 | 0.822151 | 2.761746e-53 | -8.615850e-47 |
| Msa0101340 | Msa1427110 | 0.819473 | 1.140117e-52 | -8.615850e-47 |
| Msa0101340 | Msa1445050 | 0.827412 | 1.587437e-54 | -8.615850e-47 |
| Msa0101340 | Msa1459360 | 0.863785 | 1.943215e-64 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0101340 | MtrunA17_Chr1g0154521 | 97.820 | 367 | 8 | 0 | 1 | 367 | 1 | 367 | 0.0 | 745 |
| Msa0101340 | MtrunA17_Chr3g0141321 | 80.183 | 328 | 52 | 2 | 40 | 367 | 26 | 340 | 0.0 | 548 |
| Msa0101340 | MtrunA17_Chr5g0403501 | 76.205 | 332 | 68 | 3 | 46 | 367 | 37 | 367 | 0.0 | 530 |
| Msa0101340 | MtrunA17_Chr8g0373671 | 73.860 | 329 | 77 | 4 | 40 | 366 | 23 | 344 | 0.0 | 515 |
| Msa0101340 | MtrunA17_Chr3g0127611 | 62.145 | 317 | 101 | 4 | 46 | 360 | 34 | 333 | 1.47e-146 | 418 |
| Msa0101340 | MtrunA17_Chr6g0451981 | 55.432 | 359 | 141 | 6 | 10 | 358 | 10 | 359 | 1.63e-140 | 404 |
| Msa0101340 | MtrunA17_Chr7g0259321 | 59.048 | 315 | 108 | 2 | 46 | 360 | 51 | 344 | 1.29e-138 | 398 |
| Msa0101340 | MtrunA17_Chr7g0269751 | 54.775 | 356 | 137 | 6 | 12 | 358 | 10 | 350 | 1.41e-137 | 395 |
| Msa0101340 | MtrunA17_Chr5g0414981 | 55.072 | 345 | 142 | 5 | 20 | 360 | 39 | 374 | 8.29e-136 | 394 |
| Msa0101340 | MtrunA17_Chr4g0066331 | 58.675 | 317 | 112 | 4 | 46 | 361 | 42 | 340 | 2.52e-135 | 389 |
| Msa0101340 | MtrunA17_Chr1g0196511 | 58.466 | 313 | 109 | 2 | 46 | 358 | 54 | 345 | 6.10e-133 | 384 |
| Msa0101340 | MtrunA17_Chr2g0308241 | 32.642 | 193 | 118 | 6 | 165 | 356 | 340 | 521 | 3.31e-21 | 95.1 |
| Msa0101340 | MtrunA17_Chr4g0061711 | 33.161 | 193 | 117 | 6 | 165 | 356 | 340 | 521 | 2.46e-20 | 92.4 |
| Msa0101340 | MtrunA17_Chr3g0138381 | 27.843 | 255 | 171 | 8 | 111 | 363 | 414 | 657 | 4.06e-19 | 89.0 |
| Msa0101340 | MtrunA17_Chr2g0283461 | 31.351 | 185 | 119 | 5 | 165 | 349 | 339 | 515 | 6.37e-18 | 85.1 |
| Msa0101340 | MtrunA17_Chr2g0319311 | 30.151 | 199 | 122 | 8 | 165 | 356 | 338 | 526 | 6.77e-18 | 85.1 |
| Msa0101340 | MtrunA17_Chr8g0383241 | 29.444 | 180 | 114 | 5 | 165 | 341 | 295 | 464 | 1.19e-17 | 84.3 |
| Msa0101340 | MtrunA17_Chr7g0235161 | 28.643 | 199 | 132 | 6 | 165 | 363 | 364 | 552 | 2.49e-16 | 80.5 |
| Msa0101340 | MtrunA17_Chr2g0290961 | 29.444 | 180 | 114 | 5 | 165 | 341 | 471 | 640 | 3.49e-16 | 80.1 |
| Msa0101340 | MtrunA17_Chr7g0218571 | 27.638 | 199 | 127 | 7 | 165 | 356 | 334 | 522 | 4.43e-16 | 79.7 |
| Msa0101340 | MtrunA17_Chr7g0246371 | 27.136 | 199 | 135 | 5 | 165 | 363 | 468 | 656 | 6.60e-16 | 79.3 |
| Msa0101340 | MtrunA17_Chr8g0351091 | 28.249 | 177 | 116 | 5 | 165 | 339 | 416 | 583 | 9.07e-16 | 78.6 |
| Msa0101340 | MtrunA17_Chr6g0456071 | 28.646 | 192 | 127 | 6 | 165 | 356 | 359 | 540 | 1.23e-14 | 75.1 |
| Msa0101340 | MtrunA17_Chr3g0097091 | 21.835 | 316 | 188 | 10 | 86 | 356 | 214 | 515 | 1.35e-14 | 75.1 |
| Msa0101340 | MtrunA17_Chr7g0260711 | 26.441 | 295 | 185 | 14 | 64 | 345 | 356 | 631 | 9.53e-14 | 72.8 |
| Msa0101340 | MtrunA17_Chr6g0454101 | 28.947 | 114 | 73 | 3 | 245 | 356 | 410 | 517 | 1.59e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0101340 | AT3G50760.1 | 68.539 | 356 | 87 | 6 | 13 | 365 | 5 | 338 | 2.65e-178 | 498 |
| Msa0101340 | AT1G19300.1 | 76.061 | 330 | 76 | 2 | 40 | 367 | 23 | 351 | 1.14e-175 | 492 |
| Msa0101340 | AT4G02130.3 | 60.759 | 316 | 110 | 3 | 46 | 360 | 41 | 343 | 5.84e-145 | 414 |
| Msa0101340 | AT4G02130.1 | 60.759 | 316 | 110 | 3 | 46 | 360 | 41 | 343 | 5.84e-145 | 414 |
| Msa0101340 | AT4G02130.2 | 60.759 | 316 | 110 | 3 | 46 | 360 | 41 | 343 | 5.84e-145 | 414 |
| Msa0101340 | AT3G62660.1 | 67.138 | 283 | 89 | 2 | 76 | 358 | 77 | 355 | 4.35e-142 | 407 |
| Msa0101340 | AT1G02720.1 | 56.213 | 338 | 136 | 3 | 24 | 360 | 32 | 358 | 2.15e-139 | 400 |
| Msa0101340 | AT1G02720.2 | 56.213 | 338 | 136 | 3 | 24 | 360 | 32 | 358 | 2.15e-139 | 400 |
| Msa0101340 | AT1G70090.1 | 52.575 | 369 | 160 | 5 | 1 | 360 | 1 | 363 | 1.82e-138 | 399 |
| Msa0101340 | AT1G70090.2 | 52.575 | 369 | 160 | 5 | 1 | 360 | 1 | 363 | 1.82e-138 | 399 |
| Msa0101340 | AT1G13250.1 | 60.185 | 324 | 118 | 4 | 46 | 367 | 31 | 345 | 7.26e-138 | 396 |
| Msa0101340 | AT3G06260.1 | 57.729 | 317 | 115 | 3 | 46 | 361 | 46 | 344 | 1.59e-137 | 395 |
| Msa0101340 | AT1G24170.1 | 57.994 | 319 | 128 | 3 | 46 | 360 | 50 | 366 | 3.14e-136 | 394 |
| Msa0101340 | AT3G28340.1 | 57.595 | 316 | 124 | 4 | 48 | 361 | 44 | 351 | 1.68e-135 | 391 |
| Msa0101340 | AT1G18580.1 | 32.258 | 186 | 117 | 5 | 165 | 349 | 342 | 519 | 6.60e-21 | 94.4 |
| Msa0101340 | AT5G47780.1 | 31.667 | 180 | 110 | 5 | 165 | 341 | 420 | 589 | 1.21e-19 | 90.9 |
| Msa0101340 | AT5G54690.1 | 30.151 | 199 | 122 | 8 | 165 | 356 | 331 | 519 | 8.01e-19 | 88.2 |
| Msa0101340 | AT3G61130.1 | 30.198 | 202 | 125 | 7 | 165 | 363 | 477 | 665 | 1.00e-17 | 85.1 |
| Msa0101340 | AT4G38270.2 | 27.869 | 244 | 167 | 6 | 115 | 357 | 430 | 665 | 1.83e-17 | 84.3 |
| Msa0101340 | AT4G38270.1 | 27.869 | 244 | 167 | 6 | 115 | 357 | 434 | 669 | 2.05e-17 | 84.3 |
| Msa0101340 | AT3G25140.1 | 29.000 | 200 | 123 | 5 | 165 | 358 | 363 | 549 | 7.83e-17 | 82.4 |
| Msa0101340 | AT3G01040.1 | 25.287 | 261 | 172 | 9 | 110 | 356 | 233 | 484 | 8.08e-17 | 82.0 |
| Msa0101340 | AT2G30575.1 | 27.715 | 267 | 166 | 12 | 95 | 345 | 332 | 587 | 9.43e-17 | 82.0 |
| Msa0101340 | AT3G58790.2 | 30.000 | 200 | 122 | 8 | 165 | 356 | 204 | 393 | 1.72e-16 | 80.9 |
| Msa0101340 | AT3G01040.2 | 27.778 | 198 | 128 | 7 | 165 | 356 | 329 | 517 | 1.72e-16 | 81.3 |
| Msa0101340 | AT3G01040.3 | 27.778 | 198 | 128 | 7 | 165 | 356 | 329 | 517 | 1.72e-16 | 81.3 |
| Msa0101340 | AT3G58790.1 | 30.000 | 200 | 122 | 8 | 165 | 356 | 336 | 525 | 1.79e-16 | 81.3 |
| Msa0101340 | AT1G06780.1 | 27.586 | 261 | 162 | 9 | 95 | 339 | 311 | 560 | 2.11e-16 | 80.9 |
| Msa0101340 | AT1G06780.2 | 27.586 | 261 | 162 | 9 | 95 | 339 | 324 | 573 | 2.22e-16 | 80.9 |
| Msa0101340 | AT5G15470.1 | 26.768 | 198 | 130 | 7 | 165 | 356 | 329 | 517 | 6.38e-15 | 76.3 |
| Msa0101340 | AT2G46480.3 | 24.042 | 287 | 181 | 9 | 78 | 363 | 282 | 532 | 1.05e-14 | 75.9 |
| Msa0101340 | AT2G46480.4 | 24.042 | 287 | 181 | 9 | 78 | 363 | 295 | 545 | 1.07e-14 | 75.9 |
| Msa0101340 | AT2G20810.1 | 32.663 | 199 | 123 | 7 | 165 | 363 | 342 | 529 | 5.25e-13 | 70.5 |
| Msa0101340 | AT3G02350.1 | 29.167 | 192 | 126 | 6 | 165 | 356 | 365 | 546 | 7.03e-12 | 67.0 |
| Msa0101340 | AT2G46480.2 | 22.300 | 287 | 161 | 10 | 78 | 363 | 282 | 507 | 4.27e-11 | 64.7 |
| Msa0101340 | AT2G46480.1 | 22.300 | 287 | 161 | 10 | 78 | 363 | 295 | 520 | 5.44e-11 | 64.3 |
Find 72 sgRNAs with CRISPR-Local
Find 184 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGTCCTTTGGATGCTCTT+TGG | 0.179612 | 1_3:-7948071 | Msa0101340:CDS |
| TTGTCCTTTGGATGCTCTTT+GGG | 0.232558 | 1_3:-7948070 | Msa0101340:CDS |
| TTCGATGATTCAATCGTTTC+GGG | 0.244627 | 1_3:-7948678 | Msa0101340:CDS |
| CAATTATGCAAGAAGCTATT+TGG | 0.253341 | 1_3:-7948613 | Msa0101340:CDS |
| TTTACTTCACACCAACATTT+TGG | 0.256817 | 1_3:-7948440 | Msa0101340:CDS |
| TCATGTTCGGTGTCTTCTTC+TGG | 0.259724 | 1_3:+7948918 | None:intergenic |
| AATCAAGAATCAAGAGAAAA+TGG | 0.308067 | 1_3:+7948024 | None:intergenic |
| TTACTTTAATACCGGGGTTA+TGG | 0.328231 | 1_3:-7948373 | Msa0101340:CDS |
| TTTCGATGATTCAATCGTTT+CGG | 0.340870 | 1_3:-7948679 | Msa0101340:CDS |
| TGCTAATAGACCTTGTCCTT+TGG | 0.372206 | 1_3:-7948082 | Msa0101340:CDS |
| AAACCTTGTTACTTTAATAC+CGG | 0.397438 | 1_3:-7948381 | Msa0101340:CDS |
| TCACTGATGGAGGCACAATT+TGG | 0.401749 | 1_3:+7948942 | None:intergenic |
| GTCTTCTTCTGGTTCACTGA+TGG | 0.403834 | 1_3:+7948929 | None:intergenic |
| TTGTTCCTGTGGATCATAGA+TGG | 0.412121 | 1_3:-7948218 | Msa0101340:CDS |
| GTCCAGTGAGTTTATTGCAT+TGG | 0.440935 | 1_3:-7948137 | Msa0101340:CDS |
| TGCAATAAACTCACTGGACC+TGG | 0.441630 | 1_3:+7948141 | None:intergenic |
| AATTGTAGACTTGGAATTTG+AGG | 0.447752 | 1_3:+7948700 | None:intergenic |
| AGGTAAACCATGGGTGAGAT+TGG | 0.454495 | 1_3:-7948106 | Msa0101340:CDS |
| GCGAATGTTAAAGACAAAGA+TGG | 0.456493 | 1_3:+7948411 | None:intergenic |
| TTATTGCATTGGAGTGGAAA+AGG | 0.458081 | 1_3:-7948126 | Msa0101340:CDS |
| TGTAAGAAAAGTTGTGTACT+TGG | 0.460356 | 1_3:-7948571 | Msa0101340:CDS |
| TTTGGTGAGTTGTAGAATTG+AGG | 0.465286 | 1_3:+7948960 | None:intergenic |
| GACAGAGAGGATTGCAGCCA+TGG | 0.467068 | 1_3:+7948821 | None:intergenic |
| GGTGTCTGCAAAAGATCATA+AGG | 0.476961 | 1_3:+7948045 | None:intergenic |
| AGATGGAATCAACATGGTCT+TGG | 0.481062 | 1_3:-7948201 | Msa0101340:CDS |
| TTGGTGAGTTGTAGAATTGA+GGG | 0.481706 | 1_3:+7948961 | None:intergenic |
| TGCAGGGGAAATTGTTCCTG+TGG | 0.488544 | 1_3:-7948229 | Msa0101340:CDS |
| TTCTTCTGGTTCACTGATGG+AGG | 0.490980 | 1_3:+7948932 | None:intergenic |
| AATCATCGAAATTGTAGACT+TGG | 0.491592 | 1_3:+7948691 | None:intergenic |
| TAGACTTGGAATTTGAGGTA+AGG | 0.496272 | 1_3:+7948705 | None:intergenic |
| AACCTTGTTACTTTAATACC+GGG | 0.498666 | 1_3:-7948380 | Msa0101340:CDS |
| CTTTGTCGAGATCTTCATCC+AGG | 0.499442 | 1_3:-7948159 | Msa0101340:CDS |
| AGACTTGGAATTTGAGGTAA+GGG | 0.499769 | 1_3:+7948706 | None:intergenic |
| AACATATATCCGAGGTTCCA+TGG | 0.527756 | 1_3:-7948838 | Msa0101340:CDS |
| AACAAAGATTGAGGAATGGA+TGG | 0.528450 | 1_3:-7948313 | Msa0101340:CDS |
| CGATATCATCAACTAAGATA+AGG | 0.533837 | 1_3:+7948541 | None:intergenic |
| CGAATGTTAAAGACAAAGAT+GGG | 0.534888 | 1_3:+7948412 | None:intergenic |
| TGTTAAAGACAAAGATGGGT+TGG | 0.537673 | 1_3:+7948416 | None:intergenic |
| CTCCAATGCAATAAACTCAC+TGG | 0.539210 | 1_3:+7948135 | None:intergenic |
| ATGAAGAAGTGAAGTGTTTG+AGG | 0.542144 | 1_3:+7948749 | None:intergenic |
| AGGATGAGAATCTATGAACT+TGG | 0.551100 | 1_3:-7948279 | Msa0101340:CDS |
| TTTGTGGACATGATGAGTGT+TGG | 0.558842 | 1_3:+7948796 | None:intergenic |
| GTGAGTTTATTGCATTGGAG+TGG | 0.561039 | 1_3:-7948132 | Msa0101340:CDS |
| ATCAAGTGCTGATCGAATTG+AGG | 0.561859 | 1_3:+7948644 | None:intergenic |
| GTGGACATGATGAGTGTTGG+AGG | 0.566977 | 1_3:+7948799 | None:intergenic |
| AATGGATGGAATTACAAAAG+AGG | 0.570341 | 1_3:-7948299 | Msa0101340:CDS |
| TGATTCCATCTATGATCCAC+AGG | 0.576078 | 1_3:+7948213 | None:intergenic |
| TGGAATCAACATGGTCTTGG+TGG | 0.582134 | 1_3:-7948198 | Msa0101340:CDS |
| TTAGCATCCAATCTCACCCA+TGG | 0.582810 | 1_3:+7948099 | None:intergenic |
| TGGTGAGTTGTAGAATTGAG+GGG | 0.584816 | 1_3:+7948962 | None:intergenic |
| TAGCTTCTTGCATAATTGAG+TGG | 0.588805 | 1_3:+7948618 | None:intergenic |
| ATATGTGTCAGTGTCATGTT+CGG | 0.593341 | 1_3:+7948905 | None:intergenic |
| TGATTACACAACAAAGATTG+AGG | 0.596745 | 1_3:-7948322 | Msa0101340:CDS |
| CAAAGAGCATCCAAAGGACA+AGG | 0.605477 | 1_3:+7948072 | None:intergenic |
| GGATTGCAGCCATGGAACCT+CGG | 0.623683 | 1_3:+7948829 | None:intergenic |
| TAGAGATTGAAGACACAAGA+GGG | 0.627737 | 1_3:+7949055 | None:intergenic |
| ACCCCGGTATTAAAGTAACA+AGG | 0.631984 | 1_3:+7948378 | None:intergenic |
| AAATTTGCATTGCAATACTC+CGG | 0.633009 | 1_3:+7948468 | None:intergenic |
| ATGAGTGTTGGAGGACAGAG+AGG | 0.637026 | 1_3:+7948808 | None:intergenic |
| GGAGTGGAAAAGGTAAACCA+TGG | 0.642822 | 1_3:-7948116 | Msa0101340:CDS |
| CTCTGAGGAAGCAGTCCATG+TGG | 0.643941 | 1_3:-7948877 | Msa0101340:CDS |
| TAGATCAATTACCATAACCC+CGG | 0.646191 | 1_3:+7948362 | None:intergenic |
| GATGGGTTGGACCAAAATGT+TGG | 0.647131 | 1_3:+7948429 | None:intergenic |
| ACACAACAAAGATTGAGGAA+TGG | 0.651197 | 1_3:-7948317 | Msa0101340:CDS |
| TGTCTAATGTCATTGCCACA+TGG | 0.655175 | 1_3:+7948862 | None:intergenic |
| ATAGAGATTGAAGACACAAG+AGG | 0.656250 | 1_3:+7949054 | None:intergenic |
| GAGTGGAAAAGGTAAACCAT+GGG | 0.662161 | 1_3:-7948115 | Msa0101340:CDS |
| ACCTTGTTACTTTAATACCG+GGG | 0.664037 | 1_3:-7948379 | Msa0101340:CDS |
| GGTGCCCAAAGAGCATCCAA+AGG | 0.694592 | 1_3:+7948066 | None:intergenic |
| GATCATAGATGGAATCAACA+TGG | 0.708687 | 1_3:-7948207 | Msa0101340:CDS |
| TTAGACACAACATATATCCG+AGG | 0.716181 | 1_3:-7948846 | Msa0101340:CDS |
| TGACACATATATCTGCTCTG+AGG | 0.739745 | 1_3:-7948892 | Msa0101340:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAATAAGAGTTTTGGTTT+TGG | + | chr1_3:7948044-7948063 | None:intergenic | 20.0% |
| !!! | AGAAAGAAAAATAAGAGTTT+TGG | + | chr1_3:7948050-7948069 | None:intergenic | 20.0% |
| !!! | AATTGTTTTTCTTGTTTTTG+AGG | + | chr1_3:7948129-7948148 | None:intergenic | 20.0% |
| !!! | AAAAATAAGAGTTTTGGTTT+TGG | + | chr1_3:7948044-7948063 | None:intergenic | 20.0% |
| !!! | AGAAAGAAAAATAAGAGTTT+TGG | + | chr1_3:7948050-7948069 | None:intergenic | 20.0% |
| !!! | AATTGTTTTTCTTGTTTTTG+AGG | + | chr1_3:7948129-7948148 | None:intergenic | 20.0% |
| !!! | TGTTTTTGAGGCATTTTTTT+TGG | + | chr1_3:7948117-7948136 | None:intergenic | 25.0% |
| !! | ACAACTTTTCTTACACATAA+TGG | + | chr1_3:7948557-7948576 | None:intergenic | 25.0% |
| !!! | AAACCTTGTTACTTTAATAC+CGG | - | chr1_3:7948752-7948771 | Msa0101340:CDS | 25.0% |
| ! | TGGTAATTGATCTAGAAAAA+TGG | - | chr1_3:7948780-7948799 | Msa0101340:CDS | 25.0% |
| !!! | TGTTTTTGAGGCATTTTTTT+TGG | + | chr1_3:7948117-7948136 | None:intergenic | 25.0% |
| !! | ACAACTTTTCTTACACATAA+TGG | + | chr1_3:7948557-7948576 | None:intergenic | 25.0% |
| !!! | AAACCTTGTTACTTTAATAC+CGG | - | chr1_3:7948752-7948771 | Msa0101340:CDS | 25.0% |
| ! | TGGTAATTGATCTAGAAAAA+TGG | - | chr1_3:7948780-7948799 | Msa0101340:CDS | 25.0% |
| ! | AAGTGAAAGATGATGTTTTG+TGG | + | chr1_3:7948356-7948375 | None:intergenic | 30.0% |
| !!! | AGGGAATGATTTTGAGATTA+TGG | + | chr1_3:7948411-7948430 | None:intergenic | 30.0% |
| AATTGTAGACTTGGAATTTG+AGG | + | chr1_3:7948436-7948455 | None:intergenic | 30.0% | |
| AATCATCGAAATTGTAGACT+TGG | + | chr1_3:7948445-7948464 | None:intergenic | 30.0% | |
| TTTCGATGATTCAATCGTTT+CGG | - | chr1_3:7948454-7948473 | Msa0101340:CDS | 30.0% | |
| CAATTATGCAAGAAGCTATT+TGG | - | chr1_3:7948520-7948539 | Msa0101340:CDS | 30.0% | |
| TGTAAGAAAAGTTGTGTACT+TGG | - | chr1_3:7948562-7948581 | Msa0101340:CDS | 30.0% | |
| CGATATCATCAACTAAGATA+AGG | + | chr1_3:7948595-7948614 | None:intergenic | 30.0% | |
| !!! | TGCCAAAACTGCATTTTTTT+CGG | + | chr1_3:7948642-7948661 | None:intergenic | 30.0% |
| AAATTTGCATTGCAATACTC+CGG | + | chr1_3:7948668-7948687 | None:intergenic | 30.0% | |
| ! | TTTACTTCACACCAACATTT+TGG | - | chr1_3:7948693-7948712 | Msa0101340:CDS | 30.0% |
| CGAATGTTAAAGACAAAGAT+GGG | + | chr1_3:7948724-7948743 | None:intergenic | 30.0% | |
| !! | AACCTTGTTACTTTAATACC+GGG | - | chr1_3:7948753-7948772 | Msa0101340:CDS | 30.0% |
| TGATTACACAACAAAGATTG+AGG | - | chr1_3:7948811-7948830 | Msa0101340:CDS | 30.0% | |
| AATGGATGGAATTACAAAAG+AGG | - | chr1_3:7948834-7948853 | Msa0101340:CDS | 30.0% | |
| !!! | CTTTTTTGCTTGTTTTTGCA+GGG | - | chr1_3:7948888-7948907 | Msa0101340:CDS | 30.0% |
| !!! | TTTTTTGCTTGTTTTTGCAG+GGG | - | chr1_3:7948889-7948908 | Msa0101340:CDS | 30.0% |
| ! | AAGTGAAAGATGATGTTTTG+TGG | + | chr1_3:7948356-7948375 | None:intergenic | 30.0% |
| !!! | AGGGAATGATTTTGAGATTA+TGG | + | chr1_3:7948411-7948430 | None:intergenic | 30.0% |
| AATTGTAGACTTGGAATTTG+AGG | + | chr1_3:7948436-7948455 | None:intergenic | 30.0% | |
| AATCATCGAAATTGTAGACT+TGG | + | chr1_3:7948445-7948464 | None:intergenic | 30.0% | |
| TTTCGATGATTCAATCGTTT+CGG | - | chr1_3:7948454-7948473 | Msa0101340:CDS | 30.0% | |
| CAATTATGCAAGAAGCTATT+TGG | - | chr1_3:7948520-7948539 | Msa0101340:CDS | 30.0% | |
| TGTAAGAAAAGTTGTGTACT+TGG | - | chr1_3:7948562-7948581 | Msa0101340:CDS | 30.0% | |
| CGATATCATCAACTAAGATA+AGG | + | chr1_3:7948595-7948614 | None:intergenic | 30.0% | |
| !!! | TGCCAAAACTGCATTTTTTT+CGG | + | chr1_3:7948642-7948661 | None:intergenic | 30.0% |
| AAATTTGCATTGCAATACTC+CGG | + | chr1_3:7948668-7948687 | None:intergenic | 30.0% | |
| ! | TTTACTTCACACCAACATTT+TGG | - | chr1_3:7948693-7948712 | Msa0101340:CDS | 30.0% |
| CGAATGTTAAAGACAAAGAT+GGG | + | chr1_3:7948724-7948743 | None:intergenic | 30.0% | |
| !! | AACCTTGTTACTTTAATACC+GGG | - | chr1_3:7948753-7948772 | Msa0101340:CDS | 30.0% |
| TGATTACACAACAAAGATTG+AGG | - | chr1_3:7948811-7948830 | Msa0101340:CDS | 30.0% | |
| AATGGATGGAATTACAAAAG+AGG | - | chr1_3:7948834-7948853 | Msa0101340:CDS | 30.0% | |
| !!! | CTTTTTTGCTTGTTTTTGCA+GGG | - | chr1_3:7948888-7948907 | Msa0101340:CDS | 30.0% |
| !!! | TTTTTTGCTTGTTTTTGCAG+GGG | - | chr1_3:7948889-7948908 | Msa0101340:CDS | 30.0% |
| TAGAGATTGAAGACACAAGA+GGG | + | chr1_3:7948081-7948100 | None:intergenic | 35.0% | |
| ATAGAGATTGAAGACACAAG+AGG | + | chr1_3:7948082-7948101 | None:intergenic | 35.0% | |
| !!! | TGAGGCATTTTTTTTGGTGT+TGG | + | chr1_3:7948111-7948130 | None:intergenic | 35.0% |
| TTGGTGAGTTGTAGAATTGA+GGG | + | chr1_3:7948175-7948194 | None:intergenic | 35.0% | |
| TTTGGTGAGTTGTAGAATTG+AGG | + | chr1_3:7948176-7948195 | None:intergenic | 35.0% | |
| ATATGTGTCAGTGTCATGTT+CGG | + | chr1_3:7948231-7948250 | None:intergenic | 35.0% | |
| TTAGACACAACATATATCCG+AGG | - | chr1_3:7948287-7948306 | Msa0101340:CDS | 35.0% | |
| ! | ATGAAGAAGTGAAGTGTTTG+AGG | + | chr1_3:7948387-7948406 | None:intergenic | 35.0% |
| ! | AGACTTGGAATTTGAGGTAA+GGG | + | chr1_3:7948430-7948449 | None:intergenic | 35.0% |
| ! | TAGACTTGGAATTTGAGGTA+AGG | + | chr1_3:7948431-7948450 | None:intergenic | 35.0% |
| TTCGATGATTCAATCGTTTC+GGG | - | chr1_3:7948455-7948474 | Msa0101340:CDS | 35.0% | |
| TAGCTTCTTGCATAATTGAG+TGG | + | chr1_3:7948518-7948537 | None:intergenic | 35.0% | |
| !!! | ACTGCATTTTTTTCGGCTAA+TGG | + | chr1_3:7948635-7948654 | None:intergenic | 35.0% |
| ! | AGCCGAAAAAAATGCAGTTT+TGG | - | chr1_3:7948637-7948656 | Msa0101340:CDS | 35.0% |
| TGTTAAAGACAAAGATGGGT+TGG | + | chr1_3:7948720-7948739 | None:intergenic | 35.0% | |
| GCGAATGTTAAAGACAAAGA+TGG | + | chr1_3:7948725-7948744 | None:intergenic | 35.0% | |
| !! | ACCTTGTTACTTTAATACCG+GGG | - | chr1_3:7948754-7948773 | Msa0101340:CDS | 35.0% |
| TTACTTTAATACCGGGGTTA+TGG | - | chr1_3:7948760-7948779 | Msa0101340:CDS | 35.0% | |
| TAGATCAATTACCATAACCC+CGG | + | chr1_3:7948774-7948793 | None:intergenic | 35.0% | |
| ACACAACAAAGATTGAGGAA+TGG | - | chr1_3:7948816-7948835 | Msa0101340:CDS | 35.0% | |
| AACAAAGATTGAGGAATGGA+TGG | - | chr1_3:7948820-7948839 | Msa0101340:CDS | 35.0% | |
| AGGATGAGAATCTATGAACT+TGG | - | chr1_3:7948854-7948873 | Msa0101340:CDS | 35.0% | |
| GCAAAAACAAGCAAAAAAGG+TGG | + | chr1_3:7948887-7948906 | None:intergenic | 35.0% | |
| CCTGCAAAAACAAGCAAAAA+AGG | + | chr1_3:7948890-7948909 | None:intergenic | 35.0% | |
| !!! | CCTTTTTTGCTTGTTTTTGC+AGG | - | chr1_3:7948887-7948906 | Msa0101340:CDS | 35.0% |
| GATCATAGATGGAATCAACA+TGG | - | chr1_3:7948926-7948945 | Msa0101340:CDS | 35.0% | |
| TTATTGCATTGGAGTGGAAA+AGG | - | chr1_3:7949007-7949026 | Msa0101340:CDS | 35.0% | |
| TAGAGATTGAAGACACAAGA+GGG | + | chr1_3:7948081-7948100 | None:intergenic | 35.0% | |
| ATAGAGATTGAAGACACAAG+AGG | + | chr1_3:7948082-7948101 | None:intergenic | 35.0% | |
| !!! | TGAGGCATTTTTTTTGGTGT+TGG | + | chr1_3:7948111-7948130 | None:intergenic | 35.0% |
| TTGGTGAGTTGTAGAATTGA+GGG | + | chr1_3:7948175-7948194 | None:intergenic | 35.0% | |
| TTTGGTGAGTTGTAGAATTG+AGG | + | chr1_3:7948176-7948195 | None:intergenic | 35.0% | |
| ATATGTGTCAGTGTCATGTT+CGG | + | chr1_3:7948231-7948250 | None:intergenic | 35.0% | |
| TTAGACACAACATATATCCG+AGG | - | chr1_3:7948287-7948306 | Msa0101340:CDS | 35.0% | |
| ! | ATGAAGAAGTGAAGTGTTTG+AGG | + | chr1_3:7948387-7948406 | None:intergenic | 35.0% |
| ! | AGACTTGGAATTTGAGGTAA+GGG | + | chr1_3:7948430-7948449 | None:intergenic | 35.0% |
| ! | TAGACTTGGAATTTGAGGTA+AGG | + | chr1_3:7948431-7948450 | None:intergenic | 35.0% |
| TTCGATGATTCAATCGTTTC+GGG | - | chr1_3:7948455-7948474 | Msa0101340:CDS | 35.0% | |
| TAGCTTCTTGCATAATTGAG+TGG | + | chr1_3:7948518-7948537 | None:intergenic | 35.0% | |
| !!! | ACTGCATTTTTTTCGGCTAA+TGG | + | chr1_3:7948635-7948654 | None:intergenic | 35.0% |
| ! | AGCCGAAAAAAATGCAGTTT+TGG | - | chr1_3:7948637-7948656 | Msa0101340:CDS | 35.0% |
| TGTTAAAGACAAAGATGGGT+TGG | + | chr1_3:7948720-7948739 | None:intergenic | 35.0% | |
| GCGAATGTTAAAGACAAAGA+TGG | + | chr1_3:7948725-7948744 | None:intergenic | 35.0% | |
| !! | ACCTTGTTACTTTAATACCG+GGG | - | chr1_3:7948754-7948773 | Msa0101340:CDS | 35.0% |
| TTACTTTAATACCGGGGTTA+TGG | - | chr1_3:7948760-7948779 | Msa0101340:CDS | 35.0% | |
| TAGATCAATTACCATAACCC+CGG | + | chr1_3:7948774-7948793 | None:intergenic | 35.0% | |
| ACACAACAAAGATTGAGGAA+TGG | - | chr1_3:7948816-7948835 | Msa0101340:CDS | 35.0% | |
| AACAAAGATTGAGGAATGGA+TGG | - | chr1_3:7948820-7948839 | Msa0101340:CDS | 35.0% | |
| AGGATGAGAATCTATGAACT+TGG | - | chr1_3:7948854-7948873 | Msa0101340:CDS | 35.0% | |
| GCAAAAACAAGCAAAAAAGG+TGG | + | chr1_3:7948887-7948906 | None:intergenic | 35.0% | |
| CCTGCAAAAACAAGCAAAAA+AGG | + | chr1_3:7948890-7948909 | None:intergenic | 35.0% | |
| !!! | CCTTTTTTGCTTGTTTTTGC+AGG | - | chr1_3:7948887-7948906 | Msa0101340:CDS | 35.0% |
| GATCATAGATGGAATCAACA+TGG | - | chr1_3:7948926-7948945 | Msa0101340:CDS | 35.0% | |
| TTATTGCATTGGAGTGGAAA+AGG | - | chr1_3:7949007-7949026 | Msa0101340:CDS | 35.0% | |
| !!! | GGCATTTTTTTTGGTGTTGG+AGG | + | chr1_3:7948108-7948127 | None:intergenic | 40.0% |
| TGGTGAGTTGTAGAATTGAG+GGG | + | chr1_3:7948174-7948193 | None:intergenic | 40.0% | |
| TGACACATATATCTGCTCTG+AGG | - | chr1_3:7948241-7948260 | Msa0101340:CDS | 40.0% | |
| TGTCTAATGTCATTGCCACA+TGG | + | chr1_3:7948274-7948293 | None:intergenic | 40.0% | |
| AACATATATCCGAGGTTCCA+TGG | - | chr1_3:7948295-7948314 | Msa0101340:CDS | 40.0% | |
| TTTGTGGACATGATGAGTGT+TGG | + | chr1_3:7948340-7948359 | None:intergenic | 40.0% | |
| !! | ATCAAGTGCTGATCGAATTG+AGG | + | chr1_3:7948492-7948511 | None:intergenic | 40.0% |
| ACCCCGGTATTAAAGTAACA+AGG | + | chr1_3:7948758-7948777 | None:intergenic | 40.0% | |
| TTGTTCCTGTGGATCATAGA+TGG | - | chr1_3:7948915-7948934 | Msa0101340:CDS | 40.0% | |
| TGATTCCATCTATGATCCAC+AGG | + | chr1_3:7948923-7948942 | None:intergenic | 40.0% | |
| AGATGGAATCAACATGGTCT+TGG | - | chr1_3:7948932-7948951 | Msa0101340:CDS | 40.0% | |
| !!! | CTTGGTGGTGATAATTTTCG+AGG | - | chr1_3:7948950-7948969 | Msa0101340:CDS | 40.0% |
| GTCCAGTGAGTTTATTGCAT+TGG | - | chr1_3:7948996-7949015 | Msa0101340:CDS | 40.0% | |
| CTCCAATGCAATAAACTCAC+TGG | + | chr1_3:7949001-7949020 | None:intergenic | 40.0% | |
| GTGAGTTTATTGCATTGGAG+TGG | - | chr1_3:7949001-7949020 | Msa0101340:CDS | 40.0% | |
| GAGTGGAAAAGGTAAACCAT+GGG | - | chr1_3:7949018-7949037 | Msa0101340:CDS | 40.0% | |
| TGCTAATAGACCTTGTCCTT+TGG | - | chr1_3:7949051-7949070 | Msa0101340:CDS | 40.0% | |
| TTGTCCTTTGGATGCTCTTT+GGG | - | chr1_3:7949063-7949082 | Msa0101340:CDS | 40.0% | |
| GGTGTCTGCAAAAGATCATA+AGG | + | chr1_3:7949091-7949110 | None:intergenic | 40.0% | |
| !!! | GGCATTTTTTTTGGTGTTGG+AGG | + | chr1_3:7948108-7948127 | None:intergenic | 40.0% |
| TGGTGAGTTGTAGAATTGAG+GGG | + | chr1_3:7948174-7948193 | None:intergenic | 40.0% | |
| TGACACATATATCTGCTCTG+AGG | - | chr1_3:7948241-7948260 | Msa0101340:CDS | 40.0% | |
| TGTCTAATGTCATTGCCACA+TGG | + | chr1_3:7948274-7948293 | None:intergenic | 40.0% | |
| AACATATATCCGAGGTTCCA+TGG | - | chr1_3:7948295-7948314 | Msa0101340:CDS | 40.0% | |
| TTTGTGGACATGATGAGTGT+TGG | + | chr1_3:7948340-7948359 | None:intergenic | 40.0% | |
| !! | ATCAAGTGCTGATCGAATTG+AGG | + | chr1_3:7948492-7948511 | None:intergenic | 40.0% |
| ACCCCGGTATTAAAGTAACA+AGG | + | chr1_3:7948758-7948777 | None:intergenic | 40.0% | |
| TTGTTCCTGTGGATCATAGA+TGG | - | chr1_3:7948915-7948934 | Msa0101340:CDS | 40.0% | |
| TGATTCCATCTATGATCCAC+AGG | + | chr1_3:7948923-7948942 | None:intergenic | 40.0% | |
| AGATGGAATCAACATGGTCT+TGG | - | chr1_3:7948932-7948951 | Msa0101340:CDS | 40.0% | |
| !!! | CTTGGTGGTGATAATTTTCG+AGG | - | chr1_3:7948950-7948969 | Msa0101340:CDS | 40.0% |
| GTCCAGTGAGTTTATTGCAT+TGG | - | chr1_3:7948996-7949015 | Msa0101340:CDS | 40.0% | |
| CTCCAATGCAATAAACTCAC+TGG | + | chr1_3:7949001-7949020 | None:intergenic | 40.0% | |
| GTGAGTTTATTGCATTGGAG+TGG | - | chr1_3:7949001-7949020 | Msa0101340:CDS | 40.0% | |
| GAGTGGAAAAGGTAAACCAT+GGG | - | chr1_3:7949018-7949037 | Msa0101340:CDS | 40.0% | |
| TGCTAATAGACCTTGTCCTT+TGG | - | chr1_3:7949051-7949070 | Msa0101340:CDS | 40.0% | |
| TTGTCCTTTGGATGCTCTTT+GGG | - | chr1_3:7949063-7949082 | Msa0101340:CDS | 40.0% | |
| GGTGTCTGCAAAAGATCATA+AGG | + | chr1_3:7949091-7949110 | None:intergenic | 40.0% | |
| ! | TCACTGATGGAGGCACAATT+TGG | + | chr1_3:7948194-7948213 | None:intergenic | 45.0% |
| !! | TTCTTCTGGTTCACTGATGG+AGG | + | chr1_3:7948204-7948223 | None:intergenic | 45.0% |
| !! | GTCTTCTTCTGGTTCACTGA+TGG | + | chr1_3:7948207-7948226 | None:intergenic | 45.0% |
| !! | TCATGTTCGGTGTCTTCTTC+TGG | + | chr1_3:7948218-7948237 | None:intergenic | 45.0% |
| !! | AAATGCAGTTTTGGCAGCAC+CGG | - | chr1_3:7948646-7948665 | Msa0101340:CDS | 45.0% |
| !! | GATGGGTTGGACCAAAATGT+TGG | + | chr1_3:7948707-7948726 | None:intergenic | 45.0% |
| GATCTAGAAAAATGGCGCGA+CGG | - | chr1_3:7948788-7948807 | Msa0101340:CDS | 45.0% | |
| ! | TGGAATCAACATGGTCTTGG+TGG | - | chr1_3:7948935-7948954 | Msa0101340:CDS | 45.0% |
| CTTTGTCGAGATCTTCATCC+AGG | - | chr1_3:7948974-7948993 | Msa0101340:CDS | 45.0% | |
| TGCAATAAACTCACTGGACC+TGG | + | chr1_3:7948995-7949014 | None:intergenic | 45.0% | |
| GGAGTGGAAAAGGTAAACCA+TGG | - | chr1_3:7949017-7949036 | Msa0101340:CDS | 45.0% | |
| AGGTAAACCATGGGTGAGAT+TGG | - | chr1_3:7949027-7949046 | Msa0101340:CDS | 45.0% | |
| TTAGCATCCAATCTCACCCA+TGG | + | chr1_3:7949037-7949056 | None:intergenic | 45.0% | |
| !! | CAAAGAGCATCCAAAGGACA+AGG | + | chr1_3:7949064-7949083 | None:intergenic | 45.0% |
| CTTGTCCTTTGGATGCTCTT+TGG | - | chr1_3:7949062-7949081 | Msa0101340:CDS | 45.0% | |
| ! | TCACTGATGGAGGCACAATT+TGG | + | chr1_3:7948194-7948213 | None:intergenic | 45.0% |
| !! | TTCTTCTGGTTCACTGATGG+AGG | + | chr1_3:7948204-7948223 | None:intergenic | 45.0% |
| !! | GTCTTCTTCTGGTTCACTGA+TGG | + | chr1_3:7948207-7948226 | None:intergenic | 45.0% |
| !! | TCATGTTCGGTGTCTTCTTC+TGG | + | chr1_3:7948218-7948237 | None:intergenic | 45.0% |
| !! | AAATGCAGTTTTGGCAGCAC+CGG | - | chr1_3:7948646-7948665 | Msa0101340:CDS | 45.0% |
| !! | GATGGGTTGGACCAAAATGT+TGG | + | chr1_3:7948707-7948726 | None:intergenic | 45.0% |
| GATCTAGAAAAATGGCGCGA+CGG | - | chr1_3:7948788-7948807 | Msa0101340:CDS | 45.0% | |
| ! | TGGAATCAACATGGTCTTGG+TGG | - | chr1_3:7948935-7948954 | Msa0101340:CDS | 45.0% |
| CTTTGTCGAGATCTTCATCC+AGG | - | chr1_3:7948974-7948993 | Msa0101340:CDS | 45.0% | |
| TGCAATAAACTCACTGGACC+TGG | + | chr1_3:7948995-7949014 | None:intergenic | 45.0% | |
| GGAGTGGAAAAGGTAAACCA+TGG | - | chr1_3:7949017-7949036 | Msa0101340:CDS | 45.0% | |
| AGGTAAACCATGGGTGAGAT+TGG | - | chr1_3:7949027-7949046 | Msa0101340:CDS | 45.0% | |
| TTAGCATCCAATCTCACCCA+TGG | + | chr1_3:7949037-7949056 | None:intergenic | 45.0% | |
| !! | CAAAGAGCATCCAAAGGACA+AGG | + | chr1_3:7949064-7949083 | None:intergenic | 45.0% |
| CTTGTCCTTTGGATGCTCTT+TGG | - | chr1_3:7949062-7949081 | Msa0101340:CDS | 45.0% | |
| !! | ATGAGTGTTGGAGGACAGAG+AGG | + | chr1_3:7948328-7948347 | None:intergenic | 50.0% |
| !! | GTGGACATGATGAGTGTTGG+AGG | + | chr1_3:7948337-7948356 | None:intergenic | 50.0% |
| TGCAGGGGAAATTGTTCCTG+TGG | - | chr1_3:7948904-7948923 | Msa0101340:CDS | 50.0% | |
| !! | ATGAGTGTTGGAGGACAGAG+AGG | + | chr1_3:7948328-7948347 | None:intergenic | 50.0% |
| !! | GTGGACATGATGAGTGTTGG+AGG | + | chr1_3:7948337-7948356 | None:intergenic | 50.0% |
| TGCAGGGGAAATTGTTCCTG+TGG | - | chr1_3:7948904-7948923 | Msa0101340:CDS | 50.0% | |
| ! | CTCTGAGGAAGCAGTCCATG+TGG | - | chr1_3:7948256-7948275 | Msa0101340:CDS | 55.0% |
| GGATTGCAGCCATGGAACCT+CGG | + | chr1_3:7948307-7948326 | None:intergenic | 55.0% | |
| GACAGAGAGGATTGCAGCCA+TGG | + | chr1_3:7948315-7948334 | None:intergenic | 55.0% | |
| !! | GGTGCCCAAAGAGCATCCAA+AGG | + | chr1_3:7949070-7949089 | None:intergenic | 55.0% |
| ! | CTCTGAGGAAGCAGTCCATG+TGG | - | chr1_3:7948256-7948275 | Msa0101340:CDS | 55.0% |
| GGATTGCAGCCATGGAACCT+CGG | + | chr1_3:7948307-7948326 | None:intergenic | 55.0% | |
| GACAGAGAGGATTGCAGCCA+TGG | + | chr1_3:7948315-7948334 | None:intergenic | 55.0% | |
| !! | GGTGCCCAAAGAGCATCCAA+AGG | + | chr1_3:7949070-7949089 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 7948026 | 7949129 | 7948026 | ID=Msa0101340;Name=Msa0101340 |
| chr1_3 | mRNA | 7948026 | 7949129 | 7948026 | ID=Msa0101340-mRNA-1;Parent=Msa0101340;Name=Msa0101340-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|367 |
| chr1_3 | exon | 7948026 | 7949129 | 7948026 | ID=Msa0101340-mRNA-1:exon:3138;Parent=Msa0101340-mRNA-1 |
| chr1_3 | CDS | 7948026 | 7949129 | 7948026 | ID=Msa0101340-mRNA-1:cds;Parent=Msa0101340-mRNA-1 |
| Gene Sequence |
| Protein sequence |
