Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1459360 | XP_013461603.2 | 97.327 | 449 | 12 | 0 | 1 | 449 | 3 | 451 | 0.0 | 899 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1459360 | sp|Q766C3|NEP1_NEPGR | 55.125 | 439 | 182 | 6 | 11 | 446 | 8 | 434 | 2.75e-162 | 468 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1459360 | A0A396IWD0 | 97.327 | 449 | 12 | 0 | 1 | 449 | 3 | 451 | 0.0 | 899 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0036890 | Msa1459360 | 0.881353 | 2.575699e-70 | -8.615850e-47 |
| Msa0053860 | Msa1459360 | 0.806036 | 9.994469e-50 | -8.615850e-47 |
| Msa0077340 | Msa1459360 | 0.820546 | 6.479917e-53 | -8.615850e-47 |
| Msa0084970 | Msa1459360 | 0.870161 | 1.798043e-66 | -8.615850e-47 |
| Msa0101340 | Msa1459360 | 0.863785 | 1.943215e-64 | -8.615850e-47 |
| Msa0106620 | Msa1459360 | 0.824412 | 8.183922e-54 | -8.615850e-47 |
| Msa0106710 | Msa1459360 | 0.813008 | 3.181538e-51 | -8.615850e-47 |
| Msa1382710 | Msa1459360 | 0.809244 | 2.082068e-50 | -8.615850e-47 |
| Msa1389900 | Msa1459360 | 0.807000 | 6.258446e-50 | -8.615850e-47 |
| Msa1405460 | Msa1459360 | 0.811662 | 6.257474e-51 | -8.615850e-47 |
| Msa1415540 | Msa1459360 | 0.823013 | 1.740472e-53 | -8.615850e-47 |
| Msa1427110 | Msa1459360 | 0.816000 | 6.927589e-52 | -8.615850e-47 |
| Msa1440960 | Msa1459360 | 0.804885 | 1.742486e-49 | -8.615850e-47 |
| Msa1445050 | Msa1459360 | 0.822746 | 2.008498e-53 | -8.615850e-47 |
| Msa1459360 | Msa1461370 | 0.841748 | 3.935987e-58 | -8.615850e-47 |
| Msa1459360 | Msa1464090 | 0.807231 | 5.593188e-50 | -8.615850e-47 |
| Msa0611210 | Msa1459360 | 0.807430 | 5.074472e-50 | -8.615850e-47 |
| Msa0612350 | Msa1459360 | 0.841160 | 5.622503e-58 | -8.615850e-47 |
| Msa0615290 | Msa1459360 | 0.828945 | 6.777659e-55 | -8.615850e-47 |
| Msa0615420 | Msa1459360 | 0.802389 | 5.742632e-49 | -8.615850e-47 |
| Msa0619050 | Msa1459360 | 0.801305 | 9.588303e-49 | -8.615850e-47 |
| Msa0626270 | Msa1459360 | 0.824575 | 7.494154e-54 | -8.615850e-47 |
| Msa0626450 | Msa1459360 | 0.811139 | 8.130796e-51 | -8.615850e-47 |
| Msa0626460 | Msa1459360 | 0.819242 | 1.287052e-52 | -8.615850e-47 |
| Msa0626490 | Msa1459360 | 0.805900 | 1.067567e-49 | -8.615850e-47 |
| Msa0657660 | Msa1459360 | 0.804427 | 2.171956e-49 | -8.615850e-47 |
| Msa0659120 | Msa1459360 | 0.817655 | 2.946134e-52 | -8.615850e-47 |
| Msa0664540 | Msa1459360 | 0.833560 | 4.971246e-56 | -8.615850e-47 |
| Msa0664600 | Msa1459360 | 0.813081 | 3.066323e-51 | -8.615850e-47 |
| Msa0674480 | Msa1459360 | 0.818746 | 1.668916e-52 | -8.615850e-47 |
| Msa0683960 | Msa1459360 | 0.864046 | 1.611837e-64 | -8.615850e-47 |
| Msa0687580 | Msa1459360 | 0.844806 | 6.018110e-59 | -8.615850e-47 |
| Msa0698290 | Msa1459360 | 0.830323 | 3.132515e-55 | -8.615850e-47 |
| Msa0698640 | Msa1459360 | 0.820974 | 5.165083e-53 | -8.615850e-47 |
| Msa0702720 | Msa1459360 | 0.819465 | 1.144964e-52 | -8.615850e-47 |
| Msa0714590 | Msa1459360 | 0.830180 | 3.395955e-55 | -8.615850e-47 |
| Msa0734250 | Msa1459360 | 0.806675 | 7.330593e-50 | -8.615850e-47 |
| Msa0738700 | Msa1459360 | 0.804425 | 2.173410e-49 | -8.615850e-47 |
| Msa0756620 | Msa1459360 | 0.864588 | 1.091371e-64 | -8.615850e-47 |
| Msa0782750 | Msa1459360 | 0.803521 | 3.351034e-49 | -8.615850e-47 |
| Msa0783850 | Msa1459360 | 0.848532 | 5.773665e-60 | -8.615850e-47 |
| Msa0797920 | Msa1459360 | 0.809142 | 2.189681e-50 | -8.615850e-47 |
| Msa0818710 | Msa1459360 | 0.811111 | 8.244037e-51 | -8.615850e-47 |
| Msa0818720 | Msa1459360 | 0.801157 | 1.027885e-48 | -8.615850e-47 |
| Msa0818760 | Msa1459360 | 0.803397 | 3.555498e-49 | -8.615850e-47 |
| Msa0827870 | Msa1459360 | 0.800990 | 1.112232e-48 | -8.615850e-47 |
| Msa0835970 | Msa1459360 | 0.809184 | 2.145235e-50 | -8.615850e-47 |
| Msa0125360 | Msa1459360 | 0.819499 | 1.124829e-52 | -8.615850e-47 |
| Msa0130990 | Msa1459360 | 0.859187 | 4.919303e-63 | -8.615850e-47 |
| Msa0145680 | Msa1459360 | 0.861948 | 7.163629e-64 | -8.615850e-47 |
| Msa0174450 | Msa1459360 | 0.852310 | 5.018868e-61 | -8.615850e-47 |
| Msa0176900 | Msa1459360 | 0.845281 | 4.478596e-59 | -8.615850e-47 |
| Msa0192910 | Msa1459360 | 0.832731 | 7.994748e-56 | -8.615850e-47 |
| Msa0208030 | Msa1459360 | 0.820812 | 5.626753e-53 | -8.615850e-47 |
| Msa0208140 | Msa1459360 | 0.807284 | 5.449736e-50 | -8.615850e-47 |
| Msa0221000 | Msa1459360 | 0.810858 | 9.351116e-51 | -8.615850e-47 |
| Msa0235110 | Msa1459360 | 0.825199 | 5.340647e-54 | -8.615850e-47 |
| Msa1258170 | Msa1459360 | 0.802731 | 4.881484e-49 | -8.615850e-47 |
| Msa1283740 | Msa1459360 | 0.801699 | 7.961759e-49 | -8.615850e-47 |
| Msa1340200 | Msa1459360 | 0.815712 | 8.032640e-52 | -8.615850e-47 |
| Msa1341840 | Msa1459360 | 0.831221 | 1.887169e-55 | -8.615850e-47 |
| Msa0369790 | Msa1459360 | 0.801200 | 1.007277e-48 | -8.615850e-47 |
| Msa0389500 | Msa1459360 | 0.822119 | 2.809201e-53 | -8.615850e-47 |
| Msa0392380 | Msa1459360 | 0.828341 | 9.486040e-55 | -8.615850e-47 |
| Msa0415610 | Msa1459360 | 0.841548 | 4.444535e-58 | -8.615850e-47 |
| Msa0424160 | Msa1459360 | 0.806845 | 6.747936e-50 | -8.615850e-47 |
| Msa0427700 | Msa1459360 | 0.827521 | 1.494255e-54 | -8.615850e-47 |
| Msa0440320 | Msa1459360 | 0.809737 | 1.632145e-50 | -8.615850e-47 |
| Msa0460630 | Msa1459360 | 0.811774 | 5.916785e-51 | -8.615850e-47 |
| Msa0474730 | Msa1459360 | 0.800622 | 1.321771e-48 | -8.615850e-47 |
| Msa0999680 | Msa1459360 | 0.800107 | 1.682685e-48 | -8.615850e-47 |
| Msa1010530 | Msa1459360 | 0.817613 | 3.011752e-52 | -8.615850e-47 |
| Msa1028280 | Msa1459360 | 0.805884 | 1.076061e-49 | -8.615850e-47 |
| Msa1072940 | Msa1459360 | 0.815832 | 7.552473e-52 | -8.615850e-47 |
| Msa1074890 | Msa1459360 | 0.818810 | 1.613793e-52 | -8.615850e-47 |
| Msa1085330 | Msa1459360 | 0.808793 | 2.600779e-50 | -8.615850e-47 |
| Msa0263920 | Msa1459360 | 0.813922 | 2.002681e-51 | -8.615850e-47 |
| Msa0277650 | Msa1459360 | 0.803838 | 2.879985e-49 | -8.615850e-47 |
| Msa0307270 | Msa1459360 | 0.829868 | 4.045404e-55 | -8.615850e-47 |
| Msa0322900 | Msa1459360 | 0.802777 | 4.776517e-49 | -8.615850e-47 |
| Msa1115740 | Msa1459360 | 0.819503 | 1.122468e-52 | -8.615850e-47 |
| Msa1129330 | Msa1459360 | 0.809708 | 1.655833e-50 | -8.615850e-47 |
| Msa1160920 | Msa1459360 | 0.819822 | 9.488790e-53 | -8.615850e-47 |
| Msa1161810 | Msa1459360 | 0.823485 | 1.350141e-53 | -8.615850e-47 |
| Msa1190180 | Msa1459360 | 0.802080 | 6.648102e-49 | -8.615850e-47 |
| Msa0487500 | Msa1459360 | 0.810735 | 9.945340e-51 | -8.615850e-47 |
| Msa0509550 | Msa1459360 | 0.803063 | 4.167726e-49 | -8.615850e-47 |
| Msa0519760 | Msa1459360 | 0.818197 | 2.222793e-52 | -8.615850e-47 |
| Msa0519840 | Msa1459360 | 0.811805 | 5.826337e-51 | -8.615850e-47 |
| Msa0528570 | Msa1459360 | 0.827856 | 1.241622e-54 | -8.615850e-47 |
| Msa0529030 | Msa1459360 | 0.810648 | 1.038191e-50 | -8.615850e-47 |
| Msa0557460 | Msa1459360 | 0.801574 | 8.444699e-49 | -8.615850e-47 |
| Msa0561410 | Msa1459360 | 0.826908 | 2.095833e-54 | -8.615850e-47 |
| Msa0567380 | Msa1459360 | 0.804350 | 2.253665e-49 | -8.615850e-47 |
| Msa0568800 | Msa1459360 | 0.814824 | 1.265444e-51 | -8.615850e-47 |
| Msa0869280 | Msa1459360 | 0.802551 | 5.316435e-49 | -8.615850e-47 |
| Msa0933760 | Msa1459360 | 0.822890 | 1.859336e-53 | -8.615850e-47 |
| Msa0965290 | Msa1459360 | 0.800049 | 1.729659e-48 | -8.615850e-47 |
| Msa0971650 | Msa1459360 | 0.820069 | 8.334091e-53 | -8.615850e-47 |
| Msa0973140 | Msa1459360 | 0.800288 | 1.546229e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1459360 | MtrunA17_Chr3g0130931 | 97.327 | 449 | 12 | 0 | 1 | 449 | 3 | 451 | 0.0 | 899 |
| Msa1459360 | MtrunA17_Chr5g0435871 | 38.588 | 425 | 238 | 12 | 36 | 449 | 25 | 437 | 3.70e-85 | 268 |
| Msa1459360 | MtrunA17_Chr5g0419291 | 38.626 | 422 | 232 | 13 | 40 | 449 | 25 | 431 | 4.07e-85 | 267 |
| Msa1459360 | MtrunA17_Chr5g0435971 | 38.118 | 425 | 240 | 12 | 36 | 449 | 22 | 434 | 4.10e-83 | 262 |
| Msa1459360 | MtrunA17_Chr8g0386441 | 37.619 | 420 | 236 | 13 | 42 | 449 | 27 | 432 | 5.64e-82 | 259 |
| Msa1459360 | MtrunA17_Chr1g0210201 | 39.344 | 427 | 231 | 11 | 25 | 446 | 64 | 467 | 1.24e-79 | 254 |
| Msa1459360 | MtrunA17_Chr2g0310821 | 38.038 | 418 | 229 | 10 | 42 | 448 | 46 | 444 | 4.28e-79 | 252 |
| Msa1459360 | MtrunA17_Chr1g0212321 | 35.646 | 418 | 248 | 8 | 41 | 446 | 78 | 486 | 1.70e-77 | 249 |
| Msa1459360 | MtrunA17_Chr1g0165201 | 36.697 | 436 | 236 | 12 | 35 | 446 | 50 | 469 | 4.32e-77 | 248 |
| Msa1459360 | MtrunA17_Chr8g0352661 | 35.141 | 461 | 254 | 17 | 9 | 449 | 4 | 439 | 2.14e-75 | 242 |
| Msa1459360 | MtrunA17_Chr2g0310831 | 34.273 | 461 | 254 | 14 | 15 | 448 | 4 | 442 | 7.16e-75 | 241 |
| Msa1459360 | MtrunA17_Chr7g0275731 | 38.771 | 423 | 237 | 12 | 38 | 447 | 72 | 485 | 1.35e-74 | 241 |
| Msa1459360 | MtrunA17_Chr8g0352671 | 35.566 | 433 | 247 | 14 | 33 | 449 | 23 | 439 | 1.93e-74 | 240 |
| Msa1459360 | MtrunA17_Chr2g0307991 | 37.531 | 397 | 218 | 14 | 67 | 449 | 27 | 407 | 2.36e-72 | 233 |
| Msa1459360 | MtrunA17_Chr2g0308001 | 37.533 | 381 | 215 | 9 | 87 | 449 | 36 | 411 | 2.37e-71 | 232 |
| Msa1459360 | MtrunA17_Chr5g0395931 | 38.421 | 380 | 211 | 10 | 81 | 448 | 69 | 437 | 3.83e-70 | 229 |
| Msa1459360 | MtrunA17_Chr6g0487471 | 34.266 | 429 | 259 | 9 | 33 | 448 | 18 | 436 | 4.39e-70 | 228 |
| Msa1459360 | MtrunA17_Chr2g0333991 | 33.180 | 434 | 252 | 12 | 32 | 444 | 17 | 433 | 1.09e-69 | 227 |
| Msa1459360 | MtrunA17_Chr5g0395911 | 36.856 | 369 | 211 | 9 | 92 | 448 | 57 | 415 | 2.87e-69 | 226 |
| Msa1459360 | MtrunA17_Chr2g0311451 | 33.257 | 436 | 257 | 11 | 32 | 448 | 17 | 437 | 4.45e-69 | 226 |
| Msa1459360 | MtrunA17_Chr2g0310801 | 34.272 | 426 | 243 | 11 | 42 | 448 | 28 | 435 | 2.60e-68 | 224 |
| Msa1459360 | MtrunA17_Chr5g0395871 | 38.611 | 360 | 202 | 9 | 96 | 446 | 75 | 424 | 5.95e-68 | 223 |
| Msa1459360 | MtrunA17_Chr3g0087851 | 35.697 | 423 | 248 | 11 | 42 | 449 | 26 | 439 | 9.61e-68 | 222 |
| Msa1459360 | MtrunA17_Chr5g0415951 | 34.515 | 423 | 250 | 12 | 42 | 448 | 25 | 436 | 1.81e-65 | 216 |
| Msa1459360 | MtrunA17_Chr6g0484901 | 40.058 | 347 | 195 | 7 | 102 | 446 | 156 | 491 | 2.87e-65 | 217 |
| Msa1459360 | MtrunA17_Chr3g0095891 | 36.111 | 432 | 238 | 12 | 48 | 449 | 38 | 461 | 1.42e-64 | 214 |
| Msa1459360 | MtrunA17_Chr5g0442921 | 37.471 | 435 | 234 | 16 | 44 | 446 | 125 | 553 | 8.90e-63 | 212 |
| Msa1459360 | MtrunA17_Chr8g0390761 | 34.270 | 356 | 221 | 8 | 96 | 447 | 110 | 456 | 8.10e-61 | 204 |
| Msa1459360 | MtrunA17_Chr4g0001991 | 37.221 | 403 | 210 | 17 | 68 | 446 | 134 | 517 | 9.17e-61 | 206 |
| Msa1459360 | MtrunA17_Chr6g0486981 | 31.221 | 426 | 262 | 10 | 42 | 449 | 27 | 439 | 3.92e-59 | 200 |
| Msa1459360 | MtrunA17_Chr6g0457401 | 33.962 | 424 | 252 | 12 | 42 | 448 | 26 | 438 | 1.43e-57 | 196 |
| Msa1459360 | MtrunA17_Chr4g0061641 | 38.757 | 338 | 187 | 10 | 121 | 449 | 73 | 399 | 1.44e-56 | 192 |
| Msa1459360 | MtrunA17_Chr2g0291201 | 34.634 | 410 | 226 | 17 | 60 | 446 | 61 | 451 | 2.96e-56 | 192 |
| Msa1459360 | MtrunA17_Chr3g0099891 | 37.604 | 359 | 195 | 13 | 99 | 446 | 114 | 454 | 1.63e-53 | 185 |
| Msa1459360 | MtrunA17_Chr4g0023351 | 44.298 | 228 | 119 | 3 | 88 | 307 | 44 | 271 | 1.49e-52 | 178 |
| Msa1459360 | MtrunA17_Chr7g0267171 | 33.924 | 395 | 198 | 17 | 101 | 448 | 89 | 467 | 2.72e-48 | 172 |
| Msa1459360 | MtrunA17_Chr3g0099901 | 34.624 | 439 | 234 | 18 | 37 | 447 | 73 | 486 | 1.79e-45 | 164 |
| Msa1459360 | MtrunA17_Chr2g0307461 | 29.737 | 380 | 235 | 9 | 91 | 446 | 59 | 430 | 9.64e-45 | 161 |
| Msa1459360 | MtrunA17_Chr3g0110191 | 32.337 | 368 | 213 | 11 | 104 | 449 | 88 | 441 | 1.52e-44 | 161 |
| Msa1459360 | MtrunA17_Chr1g0179091 | 30.392 | 408 | 221 | 15 | 56 | 448 | 9 | 368 | 1.91e-44 | 159 |
| Msa1459360 | MtrunA17_Chr7g0239001 | 31.135 | 379 | 215 | 14 | 105 | 449 | 62 | 428 | 6.15e-43 | 156 |
| Msa1459360 | MtrunA17_Chr2g0312941 | 29.630 | 432 | 259 | 14 | 44 | 443 | 32 | 450 | 9.47e-42 | 154 |
| Msa1459360 | MtrunA17_Chr1g0164401 | 29.073 | 399 | 246 | 13 | 54 | 439 | 47 | 421 | 1.89e-41 | 152 |
| Msa1459360 | MtrunA17_Chr8g0353261 | 29.104 | 402 | 243 | 14 | 54 | 439 | 51 | 426 | 2.29e-41 | 152 |
| Msa1459360 | MtrunA17_Chr5g0419151 | 35.764 | 288 | 161 | 7 | 169 | 448 | 98 | 369 | 6.88e-40 | 147 |
| Msa1459360 | MtrunA17_Chr5g0395891 | 33.758 | 314 | 185 | 10 | 148 | 448 | 11 | 314 | 1.68e-39 | 144 |
| Msa1459360 | MtrunA17_Chr2g0309561 | 27.767 | 515 | 276 | 21 | 10 | 447 | 14 | 509 | 1.35e-38 | 146 |
| Msa1459360 | MtrunA17_Chr5g0434411 | 31.351 | 370 | 218 | 11 | 104 | 449 | 83 | 440 | 3.49e-37 | 141 |
| Msa1459360 | MtrunA17_Chr5g0401601 | 30.081 | 369 | 226 | 14 | 100 | 449 | 86 | 441 | 4.48e-37 | 143 |
| Msa1459360 | MtrunA17_Chr4g0053721 | 30.352 | 369 | 225 | 13 | 100 | 449 | 78 | 433 | 2.42e-36 | 141 |
| Msa1459360 | MtrunA17_Chr4g0027681 | 29.508 | 427 | 247 | 20 | 59 | 447 | 27 | 437 | 6.25e-35 | 135 |
| Msa1459360 | MtrunA17_Chr2g0320621 | 30.073 | 409 | 234 | 17 | 70 | 447 | 51 | 438 | 7.05e-35 | 135 |
| Msa1459360 | MtrunA17_Chr3g0112051 | 29.752 | 363 | 205 | 13 | 105 | 446 | 76 | 409 | 9.20e-35 | 134 |
| Msa1459360 | MtrunA17_Chr8g0352691 | 34.328 | 268 | 165 | 6 | 184 | 448 | 2 | 261 | 1.79e-34 | 129 |
| Msa1459360 | MtrunA17_Chr1g0179751 | 27.945 | 433 | 260 | 16 | 45 | 447 | 60 | 470 | 2.80e-34 | 134 |
| Msa1459360 | MtrunA17_Chr4g0056211 | 28.904 | 429 | 216 | 20 | 91 | 449 | 64 | 473 | 1.85e-33 | 131 |
| Msa1459360 | MtrunA17_Chr3g0133071 | 28.288 | 403 | 251 | 12 | 61 | 447 | 58 | 438 | 1.68e-31 | 125 |
| Msa1459360 | MtrunA17_Chr5g0399171 | 27.488 | 422 | 228 | 18 | 92 | 449 | 65 | 472 | 2.94e-31 | 125 |
| Msa1459360 | MtrunA17_Chr7g0265331 | 29.630 | 378 | 219 | 19 | 101 | 447 | 80 | 441 | 5.58e-31 | 124 |
| Msa1459360 | MtrunA17_Chr1g0189381 | 28.721 | 383 | 217 | 18 | 101 | 447 | 68 | 430 | 1.29e-28 | 117 |
| Msa1459360 | MtrunA17_Chr8g0352681 | 38.776 | 147 | 76 | 3 | 41 | 180 | 27 | 166 | 3.04e-28 | 109 |
| Msa1459360 | MtrunA17_Chr7g0221681 | 28.158 | 380 | 222 | 18 | 101 | 446 | 71 | 433 | 3.17e-28 | 116 |
| Msa1459360 | MtrunA17_Chr5g0434441 | 29.919 | 371 | 222 | 11 | 104 | 448 | 70 | 428 | 4.27e-28 | 115 |
| Msa1459360 | MtrunA17_Chr3g0082281 | 29.032 | 310 | 188 | 12 | 141 | 439 | 24 | 312 | 9.11e-26 | 107 |
| Msa1459360 | MtrunA17_Chr5g0406001 | 27.913 | 369 | 221 | 12 | 103 | 446 | 113 | 461 | 7.16e-25 | 107 |
| Msa1459360 | MtrunA17_Chr8g0384731 | 28.424 | 387 | 208 | 21 | 101 | 449 | 72 | 427 | 3.14e-24 | 104 |
| Msa1459360 | MtrunA17_Chr3g0130741 | 25.564 | 399 | 228 | 22 | 90 | 449 | 69 | 437 | 1.31e-23 | 102 |
| Msa1459360 | MtrunA17_Chr8g0371351 | 26.301 | 365 | 230 | 12 | 107 | 449 | 105 | 452 | 1.10e-22 | 100 |
| Msa1459360 | MtrunA17_Chr7g0249451 | 25.916 | 382 | 228 | 17 | 101 | 447 | 70 | 431 | 1.41e-22 | 100 |
| Msa1459360 | MtrunA17_Chr6g0484731 | 27.708 | 397 | 229 | 19 | 88 | 446 | 174 | 550 | 9.65e-20 | 92.0 |
| Msa1459360 | MtrunA17_Chr1g0159791 | 26.302 | 384 | 221 | 20 | 101 | 449 | 56 | 412 | 4.03e-19 | 89.0 |
| Msa1459360 | MtrunA17_Chr2g0287811 | 27.481 | 393 | 208 | 21 | 103 | 441 | 40 | 409 | 4.23e-18 | 86.3 |
| Msa1459360 | MtrunA17_Chr8g0371371 | 24.074 | 378 | 226 | 14 | 103 | 448 | 113 | 461 | 2.83e-16 | 80.9 |
| Msa1459360 | MtrunA17_Chr2g0287781 | 26.234 | 385 | 214 | 20 | 107 | 441 | 967 | 1331 | 4.20e-16 | 81.3 |
| Msa1459360 | MtrunA17_Chr2g0287781 | 25.974 | 385 | 215 | 20 | 107 | 441 | 505 | 869 | 2.75e-14 | 75.5 |
| Msa1459360 | MtrunA17_Chr2g0287781 | 26.333 | 300 | 161 | 13 | 89 | 347 | 21 | 301 | 5.85e-13 | 71.2 |
| Msa1459360 | MtrunA17_Chr1g0185661 | 23.919 | 393 | 231 | 17 | 98 | 441 | 693 | 1066 | 6.15e-16 | 80.5 |
| Msa1459360 | MtrunA17_Chr1g0185661 | 25.000 | 392 | 227 | 20 | 98 | 441 | 42 | 414 | 4.61e-14 | 74.7 |
| Msa1459360 | MtrunA17_Chr5g0425141 | 22.409 | 357 | 235 | 14 | 107 | 441 | 106 | 442 | 1.73e-15 | 78.6 |
| Msa1459360 | MtrunA17_Chr2g0287861 | 24.425 | 348 | 206 | 14 | 103 | 411 | 44 | 373 | 6.77e-14 | 73.2 |
| Msa1459360 | MtrunA17_Chr4g0010951 | 30.168 | 179 | 97 | 8 | 100 | 256 | 59 | 231 | 4.49e-13 | 70.9 |
| Msa1459360 | MtrunA17_Chr1g0187841 | 25.436 | 401 | 231 | 16 | 75 | 440 | 28 | 395 | 5.45e-13 | 70.5 |
| Msa1459360 | MtrunA17_Chr2g0287841 | 24.069 | 349 | 206 | 13 | 103 | 411 | 68 | 397 | 1.18e-12 | 69.7 |
| Msa1459360 | MtrunA17_Chr5g0435541 | 28.261 | 138 | 84 | 3 | 325 | 447 | 1 | 138 | 3.36e-12 | 64.3 |
| Msa1459360 | MtrunA17_Chr2g0298521 | 28.571 | 140 | 89 | 2 | 55 | 191 | 68 | 199 | 1.16e-11 | 64.3 |
| Msa1459360 | MtrunA17_Chr4g0023361 | 31.008 | 129 | 82 | 4 | 324 | 449 | 1 | 125 | 1.17e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1459360 | AT2G03200.1 | 60.544 | 441 | 153 | 8 | 26 | 449 | 25 | 461 | 0.0 | 552 |
| Msa1459360 | AT1G25510.1 | 40.284 | 422 | 221 | 11 | 44 | 446 | 74 | 483 | 2.88e-78 | 251 |
| Msa1459360 | AT3G18490.1 | 41.848 | 368 | 196 | 10 | 86 | 446 | 144 | 500 | 4.66e-78 | 251 |
| Msa1459360 | AT5G33340.1 | 36.967 | 422 | 238 | 9 | 42 | 449 | 30 | 437 | 1.54e-75 | 243 |
| Msa1459360 | AT1G64830.1 | 36.782 | 435 | 236 | 12 | 34 | 449 | 17 | 431 | 2.66e-74 | 239 |
| Msa1459360 | AT1G01300.1 | 38.571 | 420 | 231 | 14 | 45 | 446 | 74 | 484 | 2.08e-73 | 239 |
| Msa1459360 | AT3G25700.1 | 34.987 | 383 | 219 | 10 | 92 | 446 | 69 | 449 | 3.71e-73 | 237 |
| Msa1459360 | AT3G61820.1 | 41.779 | 371 | 195 | 10 | 89 | 446 | 121 | 483 | 3.63e-72 | 236 |
| Msa1459360 | AT3G20015.1 | 34.862 | 436 | 252 | 12 | 32 | 446 | 46 | 470 | 3.57e-70 | 230 |
| Msa1459360 | AT2G35615.1 | 37.644 | 433 | 228 | 15 | 43 | 447 | 26 | 444 | 9.38e-69 | 226 |
| Msa1459360 | AT1G31450.1 | 37.284 | 405 | 223 | 12 | 67 | 447 | 45 | 442 | 1.93e-61 | 206 |
| Msa1459360 | AT5G10770.1 | 35.309 | 405 | 228 | 13 | 59 | 447 | 88 | 474 | 2.19e-59 | 202 |
| Msa1459360 | AT3G59080.1 | 37.121 | 396 | 212 | 14 | 81 | 446 | 144 | 532 | 3.50e-58 | 200 |
| Msa1459360 | AT2G28040.2 | 34.540 | 359 | 195 | 11 | 102 | 449 | 55 | 384 | 3.28e-55 | 188 |
| Msa1459360 | AT2G28040.1 | 34.540 | 359 | 195 | 11 | 102 | 449 | 64 | 393 | 3.80e-55 | 188 |
| Msa1459360 | AT1G79720.1 | 35.116 | 430 | 230 | 17 | 48 | 447 | 73 | 483 | 1.19e-54 | 189 |
| Msa1459360 | AT2G42980.1 | 37.403 | 385 | 206 | 15 | 90 | 446 | 147 | 524 | 2.49e-54 | 189 |
| Msa1459360 | AT2G28030.1 | 35.211 | 355 | 197 | 11 | 103 | 449 | 61 | 390 | 2.62e-53 | 183 |
| Msa1459360 | AT2G28010.1 | 33.073 | 384 | 223 | 13 | 74 | 449 | 37 | 394 | 4.61e-53 | 183 |
| Msa1459360 | AT3G52500.1 | 31.887 | 461 | 250 | 17 | 33 | 447 | 26 | 468 | 1.66e-52 | 183 |
| Msa1459360 | AT2G28225.1 | 35.376 | 359 | 195 | 14 | 103 | 449 | 67 | 400 | 9.75e-52 | 179 |
| Msa1459360 | AT5G10760.1 | 34.043 | 423 | 245 | 17 | 39 | 446 | 61 | 464 | 9.30e-51 | 179 |
| Msa1459360 | AT4G30030.1 | 35.000 | 360 | 204 | 14 | 101 | 446 | 76 | 419 | 3.62e-50 | 176 |
| Msa1459360 | AT1G09750.1 | 33.007 | 409 | 234 | 13 | 59 | 447 | 61 | 449 | 1.02e-49 | 175 |
| Msa1459360 | AT3G12700.1 | 30.024 | 423 | 264 | 12 | 44 | 446 | 50 | 460 | 3.63e-49 | 174 |
| Msa1459360 | AT2G28220.1 | 33.889 | 360 | 199 | 13 | 103 | 449 | 67 | 400 | 1.16e-48 | 171 |
| Msa1459360 | AT3G59080.2 | 35.641 | 390 | 190 | 14 | 81 | 446 | 144 | 496 | 7.79e-48 | 171 |
| Msa1459360 | AT2G23945.1 | 30.266 | 413 | 258 | 12 | 56 | 449 | 50 | 451 | 4.19e-47 | 169 |
| Msa1459360 | AT3G54400.1 | 33.041 | 342 | 202 | 11 | 103 | 434 | 88 | 412 | 3.89e-46 | 165 |
| Msa1459360 | AT4G30040.1 | 33.898 | 354 | 208 | 15 | 103 | 441 | 85 | 427 | 1.33e-44 | 161 |
| Msa1459360 | AT1G66180.1 | 31.351 | 370 | 217 | 11 | 104 | 449 | 73 | 429 | 7.70e-44 | 159 |
| Msa1459360 | AT5G37540.1 | 32.713 | 376 | 208 | 12 | 104 | 449 | 81 | 441 | 9.59e-43 | 156 |
| Msa1459360 | AT5G45120.1 | 31.100 | 418 | 214 | 19 | 92 | 446 | 72 | 478 | 1.35e-40 | 152 |
| Msa1459360 | AT5G07030.1 | 26.824 | 425 | 267 | 13 | 46 | 447 | 52 | 455 | 2.07e-39 | 147 |
| Msa1459360 | AT5G43100.2 | 30.481 | 374 | 210 | 18 | 100 | 449 | 73 | 420 | 3.42e-39 | 147 |
| Msa1459360 | AT2G39710.1 | 31.267 | 371 | 207 | 13 | 107 | 442 | 69 | 426 | 5.32e-39 | 146 |
| Msa1459360 | AT5G43100.1 | 30.481 | 374 | 210 | 18 | 100 | 449 | 73 | 420 | 1.70e-38 | 147 |
| Msa1459360 | AT5G02190.1 | 30.914 | 372 | 211 | 15 | 112 | 447 | 82 | 443 | 4.38e-38 | 144 |
| Msa1459360 | AT3G50050.1 | 30.352 | 369 | 219 | 14 | 100 | 449 | 90 | 439 | 4.20e-36 | 141 |
| Msa1459360 | AT5G36260.1 | 26.897 | 435 | 263 | 17 | 41 | 447 | 27 | 434 | 1.45e-33 | 132 |
| Msa1459360 | AT1G05840.1 | 29.288 | 379 | 219 | 18 | 101 | 447 | 78 | 439 | 8.60e-33 | 130 |
| Msa1459360 | AT2G36670.2 | 26.824 | 425 | 256 | 19 | 60 | 447 | 52 | 458 | 9.32e-32 | 127 |
| Msa1459360 | AT2G36670.1 | 26.512 | 430 | 256 | 19 | 60 | 447 | 52 | 463 | 4.56e-31 | 125 |
| Msa1459360 | AT2G36670.4 | 28.117 | 377 | 221 | 18 | 103 | 447 | 34 | 392 | 1.19e-30 | 123 |
| Msa1459360 | AT2G36670.3 | 28.117 | 377 | 221 | 18 | 103 | 447 | 34 | 392 | 1.19e-30 | 123 |
| Msa1459360 | AT5G22850.1 | 28.760 | 379 | 222 | 16 | 101 | 447 | 79 | 441 | 1.61e-30 | 123 |
| Msa1459360 | AT1G65240.1 | 26.984 | 441 | 260 | 19 | 37 | 447 | 19 | 427 | 2.84e-30 | 122 |
| Msa1459360 | AT3G02740.1 | 26.389 | 432 | 257 | 20 | 47 | 447 | 39 | 440 | 9.32e-29 | 118 |
| Msa1459360 | AT3G02740.2 | 26.933 | 375 | 225 | 17 | 103 | 447 | 10 | 365 | 6.16e-28 | 115 |
| Msa1459360 | AT1G08210.1 | 28.723 | 376 | 223 | 15 | 101 | 447 | 82 | 441 | 9.69e-28 | 115 |
| Msa1459360 | AT1G08210.4 | 28.723 | 376 | 223 | 15 | 101 | 447 | 116 | 475 | 1.47e-27 | 115 |
| Msa1459360 | AT1G08210.3 | 28.723 | 376 | 223 | 15 | 101 | 447 | 130 | 489 | 1.65e-27 | 115 |
| Msa1459360 | AT4G33490.2 | 26.829 | 410 | 219 | 20 | 86 | 449 | 40 | 414 | 5.43e-25 | 107 |
| Msa1459360 | AT3G25700.2 | 35.065 | 154 | 87 | 4 | 92 | 232 | 69 | 222 | 2.94e-24 | 103 |
| Msa1459360 | AT3G25700.2 | 31.111 | 135 | 87 | 3 | 317 | 446 | 214 | 347 | 2.96e-15 | 77.4 |
| Msa1459360 | AT1G08210.2 | 29.970 | 337 | 195 | 14 | 101 | 412 | 82 | 402 | 3.66e-24 | 105 |
| Msa1459360 | AT1G77480.1 | 29.676 | 401 | 214 | 24 | 89 | 449 | 50 | 422 | 1.54e-22 | 100 |
| Msa1459360 | AT1G77480.2 | 29.676 | 401 | 214 | 24 | 89 | 449 | 50 | 422 | 1.56e-22 | 99.8 |
| Msa1459360 | AT4G12920.1 | 26.952 | 397 | 250 | 14 | 66 | 447 | 17 | 388 | 1.58e-22 | 99.4 |
| Msa1459360 | AT4G16563.1 | 26.790 | 433 | 225 | 17 | 95 | 449 | 76 | 494 | 6.40e-21 | 95.5 |
| Msa1459360 | AT3G51350.1 | 25.562 | 356 | 220 | 12 | 103 | 434 | 102 | 436 | 7.04e-21 | 95.5 |
| Msa1459360 | AT4G35880.1 | 26.870 | 361 | 223 | 13 | 107 | 446 | 111 | 451 | 2.42e-20 | 94.0 |
| Msa1459360 | AT4G33490.1 | 27.154 | 383 | 203 | 20 | 86 | 429 | 37 | 382 | 2.35e-19 | 90.1 |
| Msa1459360 | AT1G44130.1 | 27.390 | 387 | 212 | 23 | 101 | 449 | 47 | 402 | 2.35e-19 | 90.1 |
| Msa1459360 | AT4G35880.2 | 27.596 | 337 | 203 | 13 | 107 | 422 | 111 | 427 | 2.38e-19 | 90.5 |
| Msa1459360 | AT5G24820.1 | 25.737 | 373 | 225 | 12 | 105 | 446 | 48 | 399 | 4.17e-19 | 89.4 |
| Msa1459360 | AT1G49050.1 | 26.442 | 416 | 247 | 21 | 75 | 448 | 172 | 570 | 1.05e-18 | 89.4 |
| Msa1459360 | AT3G51360.1 | 26.216 | 370 | 226 | 14 | 103 | 447 | 89 | 436 | 1.08e-18 | 89.0 |
| Msa1459360 | AT3G51360.9 | 26.503 | 366 | 222 | 14 | 107 | 447 | 103 | 446 | 1.08e-18 | 89.0 |
| Msa1459360 | AT3G51360.7 | 26.503 | 366 | 222 | 14 | 107 | 447 | 9 | 352 | 1.11e-18 | 88.2 |
| Msa1459360 | AT3G42550.1 | 24.658 | 365 | 203 | 13 | 103 | 447 | 78 | 390 | 1.20e-18 | 88.2 |
| Msa1459360 | AT2G17760.1 | 26.359 | 368 | 225 | 15 | 103 | 446 | 104 | 449 | 2.91e-18 | 87.4 |
| Msa1459360 | AT3G51330.3 | 25.356 | 351 | 220 | 11 | 107 | 434 | 106 | 437 | 4.54e-18 | 86.7 |
| Msa1459360 | AT3G51330.1 | 25.356 | 351 | 220 | 11 | 107 | 434 | 106 | 437 | 5.06e-18 | 87.0 |
| Msa1459360 | AT3G51330.2 | 26.885 | 305 | 181 | 11 | 107 | 388 | 106 | 391 | 6.99e-18 | 86.3 |
| Msa1459360 | AT1G49050.2 | 25.587 | 383 | 233 | 17 | 103 | 448 | 30 | 397 | 1.13e-17 | 85.1 |
| Msa1459360 | AT1G49050.3 | 28.188 | 298 | 181 | 15 | 75 | 352 | 172 | 456 | 3.00e-17 | 84.3 |
| Msa1459360 | AT1G03230.1 | 25.974 | 385 | 226 | 19 | 102 | 441 | 44 | 414 | 4.13e-16 | 80.5 |
| Msa1459360 | AT3G51360.10 | 25.424 | 413 | 247 | 16 | 27 | 411 | 19 | 398 | 6.98e-16 | 79.7 |
| Msa1459360 | AT3G51360.6 | 25.424 | 413 | 247 | 16 | 27 | 411 | 29 | 408 | 8.43e-16 | 79.7 |
| Msa1459360 | AT3G51360.4 | 25.065 | 387 | 232 | 15 | 27 | 388 | 19 | 372 | 5.97e-14 | 73.9 |
| Msa1459360 | AT3G51360.5 | 25.065 | 387 | 232 | 15 | 27 | 388 | 29 | 382 | 6.36e-14 | 73.9 |
| Msa1459360 | AT5G48430.1 | 24.910 | 277 | 181 | 8 | 189 | 441 | 115 | 388 | 1.65e-12 | 69.3 |
| Msa1459360 | AT3G51360.3 | 25.625 | 320 | 200 | 13 | 144 | 447 | 13 | 310 | 5.65e-12 | 67.4 |
| Msa1459360 | AT3G51360.8 | 25.625 | 320 | 200 | 13 | 144 | 447 | 13 | 310 | 5.65e-12 | 67.4 |
Find 85 sgRNAs with CRISPR-Local
Find 222 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTAGATACTCACCGTTTC+CGG | 0.192247 | tig0040219:+15109 | Msa1459360:intergenic |
| GGAACCCGCCTTGAGAAATT+TGG | 0.230362 | tig0040219:+15294 | Msa1459360:intergenic |
| ATGATTGCTGATTCAAGTTT+AGG | 0.247179 | tig0040219:-14210 | Msa1459360:CDS |
| ACACCATTGCATTTAGTCTT+TGG | 0.261329 | tig0040219:+15183 | Msa1459360:intergenic |
| AATTTCTTACCCTGCAGTTT+TGG | 0.262242 | tig0040219:-15063 | Msa1459360:CDS |
| CAAGGGTTTGAACAAGCTTC+AGG | 0.279392 | tig0040219:-14735 | Msa1459360:CDS |
| GAAATTACCGGTCGATAAAT+CGG | 0.298038 | tig0040219:-14349 | Msa1459360:CDS |
| AGGACGTGGTCCTTTGTCTT+TGG | 0.305789 | tig0040219:-14700 | Msa1459360:CDS |
| CACTCTTCGCCATGTTGATT+CGG | 0.307067 | tig0040219:-15267 | Msa1459360:CDS |
| TGCAATTATGTTTATTCATA+TGG | 0.307345 | tig0040219:-14876 | Msa1459360:CDS |
| TCTAATGGAATGTCTATCTT+TGG | 0.309215 | tig0040219:-14162 | Msa1459360:CDS |
| TCATTTCAAAGGTGGTGATT+TGG | 0.324753 | tig0040219:-14253 | Msa1459360:CDS |
| GTCGATAAATCGGGTTCAAC+TGG | 0.328905 | tig0040219:-14339 | Msa1459360:CDS |
| CTCTTATTGTTTAACCTCAA+TGG | 0.332721 | tig0040219:-14652 | Msa1459360:CDS |
| GCTTCAGGGTTGGTTGGATT+AGG | 0.351605 | tig0040219:-14720 | Msa1459360:CDS |
| AAAACTGCAGGGTAAGAAAT+TGG | 0.351817 | tig0040219:+15065 | Msa1459360:intergenic |
| GGTGGTGTAATTATTGATTC+TGG | 0.361626 | tig0040219:-14438 | Msa1459360:CDS |
| AGGTGTTGCTTGTTTAGCTA+TGG | 0.362086 | tig0040219:-14190 | Msa1459360:CDS |
| GGTAGTGAAACATTCACTTT+TGG | 0.375982 | tig0040219:-14825 | Msa1459360:CDS |
| AACCATTGTTGCTGCAAGTT+GGG | 0.389462 | tig0040219:+14898 | Msa1459360:intergenic |
| TTAGCTATGGGAGCTTCTAA+TGG | 0.390722 | tig0040219:-14177 | Msa1459360:CDS |
| GCGTTCAACATGGCATCAAC+CGG | 0.402130 | tig0040219:-15220 | Msa1459360:CDS |
| TCACCGTTTCCGGCGTGAAC+CGG | 0.417313 | tig0040219:+15119 | Msa1459360:intergenic |
| AAATGTTAATGCCACAAAAC+AGG | 0.432893 | tig0040219:-14589 | Msa1459360:CDS |
| ACTCTTCGCCATGTTGATTC+GGG | 0.433466 | tig0040219:-15266 | Msa1459360:CDS |
| GGTGTTGCTTGTTTAGCTAT+GGG | 0.444613 | tig0040219:-14189 | Msa1459360:CDS |
| CACAACTTATTACATTGAGT+TGG | 0.458874 | tig0040219:+14075 | Msa1459360:intergenic |
| TACATCTCAAACGAAATTAC+CGG | 0.459448 | tig0040219:-14361 | Msa1459360:CDS |
| TGCAATGGATTTGTAATAAG+TGG | 0.466557 | tig0040219:+14558 | Msa1459360:intergenic |
| ATACAGGAAGTGATCTCATA+TGG | 0.474114 | tig0040219:-15040 | Msa1459360:CDS |
| CCTCTTGATGTTGAGGATGT+TGG | 0.474796 | tig0040219:+15332 | Msa1459360:intergenic |
| CGGAAACGGTGAGTATCTAA+TGG | 0.475311 | tig0040219:-15108 | Msa1459360:CDS |
| ATCACCAAATTTCTCAAGGC+GGG | 0.484091 | tig0040219:-15298 | Msa1459360:CDS |
| TTTGGAGTCGGCTATGTCCC+CGG | 0.492840 | tig0040219:+15201 | Msa1459360:intergenic |
| CAACCATTGTTGCTGCAAGT+TGG | 0.494678 | tig0040219:+14897 | Msa1459360:intergenic |
| ACTACATGAGAGTTTAGAAA+AGG | 0.496166 | tig0040219:+14947 | Msa1459360:intergenic |
| CTTCCTGTATCCAAAACTGC+AGG | 0.502993 | tig0040219:+15053 | Msa1459360:intergenic |
| TCACTTGAAGGTATATCTGT+TGG | 0.504731 | tig0040219:-14516 | Msa1459360:CDS |
| CAACATGGCGAAGAGTGATT+CGG | 0.510181 | tig0040219:+15273 | Msa1459360:intergenic |
| TGAGAGTTTAGAAAAGGTTG+AGG | 0.520561 | tig0040219:+14953 | Msa1459360:intergenic |
| AAGGGTTTGAACAAGCTTCA+GGG | 0.524466 | tig0040219:-14734 | Msa1459360:CDS |
| GAACAAGCTTCAGGGTTGGT+TGG | 0.529767 | tig0040219:-14726 | Msa1459360:CDS |
| AAATTACCGGTCGATAAATC+GGG | 0.532183 | tig0040219:-14348 | Msa1459360:CDS |
| CGCCTTGAGAAATTTGGTGA+TGG | 0.533286 | tig0040219:+15300 | Msa1459360:intergenic |
| AGAAATTGGTGGTGTTCCAA+TGG | 0.538618 | tig0040219:+15079 | Msa1459360:intergenic |
| CGTTCAACATGGCATCAACC+GGG | 0.541177 | tig0040219:-15219 | Msa1459360:CDS |
| TATCTAATGGAATTATCCAT+TGG | 0.541639 | tig0040219:-15095 | Msa1459360:CDS |
| TATTCAACAACAAAATATGT+TGG | 0.544631 | tig0040219:-14136 | Msa1459360:CDS |
| GGTGGTGATTTGGAATTGCC+TGG | 0.558833 | tig0040219:-14243 | Msa1459360:CDS |
| AACTGAGGATTCATCTCAAG+TGG | 0.559058 | tig0040219:-15147 | Msa1459360:CDS |
| GGGTTGGTTGGATTAGGACG+TGG | 0.561420 | tig0040219:-14714 | Msa1459360:CDS |
| TCCCCAACTTGCAGCAACAA+TGG | 0.562844 | tig0040219:-14900 | Msa1459360:CDS |
| GTTGAACCCGATTTATCGAC+CGG | 0.563118 | tig0040219:+14342 | Msa1459360:intergenic |
| TGTCATGTTGGTGACACTAC+TGG | 0.564089 | tig0040219:-15375 | Msa1459360:CDS |
| TTCATCTCAAGTGGAAGCAC+CGG | 0.564417 | tig0040219:-15138 | Msa1459360:CDS |
| GTTTGAACAAGCTTCAGGGT+TGG | 0.567318 | tig0040219:-14730 | Msa1459360:CDS |
| TTGCATTTAGTCTTTGGAGT+CGG | 0.574174 | tig0040219:+15189 | Msa1459360:intergenic |
| TTGTTGCTGCAAGTTGGGGA+AGG | 0.579404 | tig0040219:+14903 | Msa1459360:intergenic |
| GAGGTTAGTGATGATGGAAG+TGG | 0.582198 | tig0040219:-14459 | Msa1459360:CDS |
| ACCATTGTTGCTGCAAGTTG+GGG | 0.588415 | tig0040219:+14899 | Msa1459360:intergenic |
| GAGAAACCCTCTTGATGTTG+AGG | 0.588466 | tig0040219:+15325 | Msa1459360:intergenic |
| AATTGAGAAACCAAAGACAA+AGG | 0.591149 | tig0040219:+14690 | Msa1459360:intergenic |
| AAACTCGAGCGCGTTCAACA+TGG | 0.593524 | tig0040219:-15230 | Msa1459360:CDS |
| GGTTAATCATGATCTTCAGA+AGG | 0.593723 | tig0040219:-14115 | Msa1459360:CDS |
| GGGAAGGTAAAGCATTGCAT+AGG | 0.594254 | tig0040219:+14919 | Msa1459360:intergenic |
| AACCATCACCAAATTTCTCA+AGG | 0.601116 | tig0040219:-15302 | Msa1459360:CDS |
| GGTTGTGGTGAAGACAATGA+AGG | 0.605437 | tig0040219:-14759 | Msa1459360:CDS |
| CCAACATCCTCAACATCAAG+AGG | 0.614340 | tig0040219:-15332 | Msa1459360:CDS |
| TGTTTGTAACATTGTGAACA+AGG | 0.616147 | tig0040219:+15005 | Msa1459360:intergenic |
| ACTGCAGGGTAAGAAATTGG+TGG | 0.619033 | tig0040219:+15068 | Msa1459360:intergenic |
| TTGTTCAAAATGTGTCATGT+TGG | 0.639933 | tig0040219:-15387 | Msa1459360:CDS |
| AGTTCTTGCCCGAATCAACA+TGG | 0.641331 | tig0040219:+15258 | Msa1459360:intergenic |
| TTGAGATGAATCCTCAGTTG+TGG | 0.642542 | tig0040219:+15151 | Msa1459360:intergenic |
| TTCCTGTATCCAAAACTGCA+GGG | 0.643359 | tig0040219:+15054 | Msa1459360:intergenic |
| GTGGAAGCACCGGTTCACGC+CGG | 0.647259 | tig0040219:-15128 | Msa1459360:CDS |
| GGTGAAGACAATGAAGGACA+AGG | 0.647678 | tig0040219:-14753 | Msa1459360:CDS |
| ACTCCAAAGACTAAATGCAA+TGG | 0.654657 | tig0040219:-15186 | Msa1459360:CDS |
| GTTAGTGATGATGGAAGTGG+TGG | 0.663606 | tig0040219:-14456 | Msa1459360:CDS |
| CAACATCCTCAACATCAAGA+GGG | 0.669695 | tig0040219:-15331 | Msa1459360:CDS |
| AATGGATTTGTAATAAGTGG+AGG | 0.675526 | tig0040219:+14561 | Msa1459360:intergenic |
| GTTAGCATCATCCACAACTG+AGG | 0.676686 | tig0040219:-15162 | Msa1459360:CDS |
| GTGAAGACAATGAAGGACAA+GGG | 0.682228 | tig0040219:-14752 | Msa1459360:CDS |
| CATCACCAAATTTCTCAAGG+CGG | 0.689470 | tig0040219:-15299 | Msa1459360:CDS |
| GTTCAACATGGCATCAACCG+GGG | 0.699502 | tig0040219:-15218 | Msa1459360:CDS |
| GGTGATTATTCTATGACACA+AGG | 0.711992 | tig0040219:-14855 | Msa1459360:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGAAATGAAAAATTAATTT+TGG | + | tig0040219:15211-15230 | Msa1459360:intergenic | 10.0% |
| !!! | AAATTAATTTTTCATTTCAA+AGG | - | tig0040219:15211-15230 | Msa1459360:CDS | 10.0% |
| !!! | TTGAAATGAAAAATTAATTT+TGG | + | tig0040219:15211-15230 | Msa1459360:intergenic | 10.0% |
| !!! | AAATTAATTTTTCATTTCAA+AGG | - | tig0040219:15211-15230 | Msa1459360:CDS | 10.0% |
| !!! | GAATTTTTTGGATTAAAAAT+TGG | + | tig0040219:14503-14522 | Msa1459360:intergenic | 15.0% |
| !! | AGTGAAATATAATAAAAAGA+TGG | + | tig0040219:14944-14963 | Msa1459360:intergenic | 15.0% |
| !!! | TTTTATTATATTTCACTTGA+AGG | - | tig0040219:14947-14966 | Msa1459360:CDS | 15.0% |
| !!! | GAATTTTTTGGATTAAAAAT+TGG | + | tig0040219:14503-14522 | Msa1459360:intergenic | 15.0% |
| !! | AGTGAAATATAATAAAAAGA+TGG | + | tig0040219:14944-14963 | Msa1459360:intergenic | 15.0% |
| !!! | TTTTATTATATTTCACTTGA+AGG | - | tig0040219:14947-14966 | Msa1459360:CDS | 15.0% |
| !! | TGCAATTATGTTTATTCATA+TGG | - | tig0040219:14599-14618 | Msa1459360:CDS | 20.0% |
| !!! | TTAATTTTTCATTTCAAAGG+TGG | - | tig0040219:15214-15233 | Msa1459360:CDS | 20.0% |
| !! | TATTCAACAACAAAATATGT+TGG | - | tig0040219:15339-15358 | Msa1459360:CDS | 20.0% |
| !! | TGCAATTATGTTTATTCATA+TGG | - | tig0040219:14599-14618 | Msa1459360:CDS | 20.0% |
| !!! | TTAATTTTTCATTTCAAAGG+TGG | - | tig0040219:15214-15233 | Msa1459360:CDS | 20.0% |
| !! | TATTCAACAACAAAATATGT+TGG | - | tig0040219:15339-15358 | Msa1459360:CDS | 20.0% |
| ! | TATCTAATGGAATTATCCAT+TGG | - | tig0040219:14380-14399 | Msa1459360:CDS | 25.0% |
| ! | TTTGGATTAAAAATTGGTGT+TGG | + | tig0040219:14497-14516 | Msa1459360:intergenic | 25.0% |
| !!! | CAATGTTTTTAACAGAAACT+TGG | + | tig0040219:14691-14710 | Msa1459360:intergenic | 25.0% |
| ! | CAAGTTTCTGTTAAAAACAT+TGG | - | tig0040219:14689-14708 | Msa1459360:CDS | 25.0% |
| !!! | TCTGTTAAAAACATTGGTTT+TGG | - | tig0040219:14695-14714 | Msa1459360:CDS | 25.0% |
| !!! | AAAGAAAGTGTTCTTTTGTT+AGG | - | tig0040219:14854-14873 | Msa1459360:CDS | 25.0% |
| ! | TAATAAAAAGATGGTTGCAA+TGG | + | tig0040219:14935-14954 | Msa1459360:intergenic | 25.0% |
| ! | TATCTAATGGAATTATCCAT+TGG | - | tig0040219:14380-14399 | Msa1459360:CDS | 25.0% |
| ! | TTTGGATTAAAAATTGGTGT+TGG | + | tig0040219:14497-14516 | Msa1459360:intergenic | 25.0% |
| !!! | CAATGTTTTTAACAGAAACT+TGG | + | tig0040219:14691-14710 | Msa1459360:intergenic | 25.0% |
| ! | CAAGTTTCTGTTAAAAACAT+TGG | - | tig0040219:14689-14708 | Msa1459360:CDS | 25.0% |
| !!! | TCTGTTAAAAACATTGGTTT+TGG | - | tig0040219:14695-14714 | Msa1459360:CDS | 25.0% |
| !!! | AAAGAAAGTGTTCTTTTGTT+AGG | - | tig0040219:14854-14873 | Msa1459360:CDS | 25.0% |
| ! | TAATAAAAAGATGGTTGCAA+TGG | + | tig0040219:14935-14954 | Msa1459360:intergenic | 25.0% |
| TTGTTCAAAATGTGTCATGT+TGG | - | tig0040219:14088-14107 | Msa1459360:CDS | 30.0% | |
| TGTTTGTAACATTGTGAACA+AGG | + | tig0040219:14473-14492 | Msa1459360:intergenic | 30.0% | |
| !!! | GAAAAGGTTGAGGAATTTTT+TGG | + | tig0040219:14515-14534 | Msa1459360:intergenic | 30.0% |
| ACTACATGAGAGTTTAGAAA+AGG | + | tig0040219:14531-14550 | Msa1459360:intergenic | 30.0% | |
| !! | TCTATGACACAAGGTATTTT+AGG | - | tig0040219:14629-14648 | Msa1459360:CDS | 30.0% |
| !!! | AAAAACATTGGTTTTGGTTG+TGG | - | tig0040219:14701-14720 | Msa1459360:CDS | 30.0% |
| AATTGAGAAACCAAAGACAA+AGG | + | tig0040219:14788-14807 | Msa1459360:intergenic | 30.0% | |
| CTCTTATTGTTTAACCTCAA+TGG | - | tig0040219:14823-14842 | Msa1459360:CDS | 30.0% | |
| ! | TGTTTTGTGGCATTAACATT+TGG | + | tig0040219:14887-14906 | Msa1459360:intergenic | 30.0% |
| AAATGTTAATGCCACAAAAC+AGG | - | tig0040219:14886-14905 | Msa1459360:CDS | 30.0% | |
| ! | AATGGATTTGTAATAAGTGG+AGG | + | tig0040219:14917-14936 | Msa1459360:intergenic | 30.0% |
| ! | TGCAATGGATTTGTAATAAG+TGG | + | tig0040219:14920-14939 | Msa1459360:intergenic | 30.0% |
| ! | AATTGAGCAATCAACTTTTG+AGG | - | tig0040219:14997-15016 | Msa1459360:CDS | 30.0% |
| TACATCTCAAACGAAATTAC+CGG | - | tig0040219:15114-15133 | Msa1459360:CDS | 30.0% | |
| !!! | TTTGTTTTAGTTTGCCATCA+GGG | - | tig0040219:15167-15186 | Msa1459360:CDS | 30.0% |
| ! | GCAATCATATAATTTTCACC+AGG | + | tig0040219:15253-15272 | Msa1459360:intergenic | 30.0% |
| !! | ATGATTGCTGATTCAAGTTT+AGG | - | tig0040219:15265-15284 | Msa1459360:CDS | 30.0% |
| TCTAATGGAATGTCTATCTT+TGG | - | tig0040219:15313-15332 | Msa1459360:CDS | 30.0% | |
| CACAACTTATTACATTGAGT+TGG | + | tig0040219:15403-15422 | Msa1459360:intergenic | 30.0% | |
| TTGTTCAAAATGTGTCATGT+TGG | - | tig0040219:14088-14107 | Msa1459360:CDS | 30.0% | |
| TGTTTGTAACATTGTGAACA+AGG | + | tig0040219:14473-14492 | Msa1459360:intergenic | 30.0% | |
| !!! | GAAAAGGTTGAGGAATTTTT+TGG | + | tig0040219:14515-14534 | Msa1459360:intergenic | 30.0% |
| ACTACATGAGAGTTTAGAAA+AGG | + | tig0040219:14531-14550 | Msa1459360:intergenic | 30.0% | |
| !! | TCTATGACACAAGGTATTTT+AGG | - | tig0040219:14629-14648 | Msa1459360:CDS | 30.0% |
| !!! | AAAAACATTGGTTTTGGTTG+TGG | - | tig0040219:14701-14720 | Msa1459360:CDS | 30.0% |
| AATTGAGAAACCAAAGACAA+AGG | + | tig0040219:14788-14807 | Msa1459360:intergenic | 30.0% | |
| CTCTTATTGTTTAACCTCAA+TGG | - | tig0040219:14823-14842 | Msa1459360:CDS | 30.0% | |
| ! | TGTTTTGTGGCATTAACATT+TGG | + | tig0040219:14887-14906 | Msa1459360:intergenic | 30.0% |
| AAATGTTAATGCCACAAAAC+AGG | - | tig0040219:14886-14905 | Msa1459360:CDS | 30.0% | |
| ! | AATGGATTTGTAATAAGTGG+AGG | + | tig0040219:14917-14936 | Msa1459360:intergenic | 30.0% |
| ! | TGCAATGGATTTGTAATAAG+TGG | + | tig0040219:14920-14939 | Msa1459360:intergenic | 30.0% |
| ! | AATTGAGCAATCAACTTTTG+AGG | - | tig0040219:14997-15016 | Msa1459360:CDS | 30.0% |
| TACATCTCAAACGAAATTAC+CGG | - | tig0040219:15114-15133 | Msa1459360:CDS | 30.0% | |
| !!! | TTTGTTTTAGTTTGCCATCA+GGG | - | tig0040219:15167-15186 | Msa1459360:CDS | 30.0% |
| ! | GCAATCATATAATTTTCACC+AGG | + | tig0040219:15253-15272 | Msa1459360:intergenic | 30.0% |
| !! | ATGATTGCTGATTCAAGTTT+AGG | - | tig0040219:15265-15284 | Msa1459360:CDS | 30.0% |
| TCTAATGGAATGTCTATCTT+TGG | - | tig0040219:15313-15332 | Msa1459360:CDS | 30.0% | |
| CACAACTTATTACATTGAGT+TGG | + | tig0040219:15403-15422 | Msa1459360:intergenic | 30.0% | |
| AACCATCACCAAATTTCTCA+AGG | - | tig0040219:14173-14192 | Msa1459360:CDS | 35.0% | |
| !! | TTGCATTTAGTCTTTGGAGT+CGG | + | tig0040219:14289-14308 | Msa1459360:intergenic | 35.0% |
| ACTCCAAAGACTAAATGCAA+TGG | - | tig0040219:14289-14308 | Msa1459360:CDS | 35.0% | |
| ! | ACACCATTGCATTTAGTCTT+TGG | + | tig0040219:14295-14314 | Msa1459360:intergenic | 35.0% |
| AAAACTGCAGGGTAAGAAAT+TGG | + | tig0040219:14413-14432 | Msa1459360:intergenic | 35.0% | |
| ! | AATTTCTTACCCTGCAGTTT+TGG | - | tig0040219:14412-14431 | Msa1459360:CDS | 35.0% |
| ATACAGGAAGTGATCTCATA+TGG | - | tig0040219:14435-14454 | Msa1459360:CDS | 35.0% | |
| TGAGAGTTTAGAAAAGGTTG+AGG | + | tig0040219:14525-14544 | Msa1459360:intergenic | 35.0% | |
| GGTGATTATTCTATGACACA+AGG | - | tig0040219:14620-14639 | Msa1459360:CDS | 35.0% | |
| ! | GGTAGTGAAACATTCACTTT+TGG | - | tig0040219:14650-14669 | Msa1459360:CDS | 35.0% |
| ! | TTCTTTTGTGTCATCCATTG+AGG | + | tig0040219:14840-14859 | Msa1459360:intergenic | 35.0% |
| ! | TCACTTGAAGGTATATCTGT+TGG | - | tig0040219:14959-14978 | Msa1459360:CDS | 35.0% |
| !!! | ACTTTTGAGGTTAGTGATGA+TGG | - | tig0040219:15010-15029 | Msa1459360:CDS | 35.0% |
| !! | GGTGGTGTAATTATTGATTC+TGG | - | tig0040219:15037-15056 | Msa1459360:CDS | 35.0% |
| GAAATTACCGGTCGATAAAT+CGG | - | tig0040219:15126-15145 | Msa1459360:CDS | 35.0% | |
| AAATTACCGGTCGATAAATC+GGG | - | tig0040219:15127-15146 | Msa1459360:CDS | 35.0% | |
| !!! | GTTTGTTTTAGTTTGCCATC+AGG | - | tig0040219:15166-15185 | Msa1459360:CDS | 35.0% |
| TCATTTCAAAGGTGGTGATT+TGG | - | tig0040219:15222-15241 | Msa1459360:CDS | 35.0% | |
| GGTTAATCATGATCTTCAGA+AGG | - | tig0040219:15360-15379 | Msa1459360:CDS | 35.0% | |
| AACCATCACCAAATTTCTCA+AGG | - | tig0040219:14173-14192 | Msa1459360:CDS | 35.0% | |
| !! | TTGCATTTAGTCTTTGGAGT+CGG | + | tig0040219:14289-14308 | Msa1459360:intergenic | 35.0% |
| ACTCCAAAGACTAAATGCAA+TGG | - | tig0040219:14289-14308 | Msa1459360:CDS | 35.0% | |
| ! | ACACCATTGCATTTAGTCTT+TGG | + | tig0040219:14295-14314 | Msa1459360:intergenic | 35.0% |
| AAAACTGCAGGGTAAGAAAT+TGG | + | tig0040219:14413-14432 | Msa1459360:intergenic | 35.0% | |
| ! | AATTTCTTACCCTGCAGTTT+TGG | - | tig0040219:14412-14431 | Msa1459360:CDS | 35.0% |
| ATACAGGAAGTGATCTCATA+TGG | - | tig0040219:14435-14454 | Msa1459360:CDS | 35.0% | |
| TGAGAGTTTAGAAAAGGTTG+AGG | + | tig0040219:14525-14544 | Msa1459360:intergenic | 35.0% | |
| GGTGATTATTCTATGACACA+AGG | - | tig0040219:14620-14639 | Msa1459360:CDS | 35.0% | |
| ! | GGTAGTGAAACATTCACTTT+TGG | - | tig0040219:14650-14669 | Msa1459360:CDS | 35.0% |
| ! | TTCTTTTGTGTCATCCATTG+AGG | + | tig0040219:14840-14859 | Msa1459360:intergenic | 35.0% |
| ! | TCACTTGAAGGTATATCTGT+TGG | - | tig0040219:14959-14978 | Msa1459360:CDS | 35.0% |
| !!! | ACTTTTGAGGTTAGTGATGA+TGG | - | tig0040219:15010-15029 | Msa1459360:CDS | 35.0% |
| !! | GGTGGTGTAATTATTGATTC+TGG | - | tig0040219:15037-15056 | Msa1459360:CDS | 35.0% |
| GAAATTACCGGTCGATAAAT+CGG | - | tig0040219:15126-15145 | Msa1459360:CDS | 35.0% | |
| AAATTACCGGTCGATAAATC+GGG | - | tig0040219:15127-15146 | Msa1459360:CDS | 35.0% | |
| !!! | GTTTGTTTTAGTTTGCCATC+AGG | - | tig0040219:15166-15185 | Msa1459360:CDS | 35.0% |
| TCATTTCAAAGGTGGTGATT+TGG | - | tig0040219:15222-15241 | Msa1459360:CDS | 35.0% | |
| GGTTAATCATGATCTTCAGA+AGG | - | tig0040219:15360-15379 | Msa1459360:CDS | 35.0% | |
| CAACATCCTCAACATCAAGA+GGG | - | tig0040219:14144-14163 | Msa1459360:CDS | 40.0% | |
| CATCACCAAATTTCTCAAGG+CGG | - | tig0040219:14176-14195 | Msa1459360:CDS | 40.0% | |
| ATCACCAAATTTCTCAAGGC+GGG | - | tig0040219:14177-14196 | Msa1459360:CDS | 40.0% | |
| TTGAGATGAATCCTCAGTTG+TGG | + | tig0040219:14327-14346 | Msa1459360:intergenic | 40.0% | |
| AACTGAGGATTCATCTCAAG+TGG | - | tig0040219:14328-14347 | Msa1459360:CDS | 40.0% | |
| CATTAGATACTCACCGTTTC+CGG | + | tig0040219:14369-14388 | Msa1459360:intergenic | 40.0% | |
| !! | AGAAATTGGTGGTGTTCCAA+TGG | + | tig0040219:14399-14418 | Msa1459360:intergenic | 40.0% |
| TTCCTGTATCCAAAACTGCA+GGG | + | tig0040219:14424-14443 | Msa1459360:intergenic | 40.0% | |
| AACCATTGTTGCTGCAAGTT+GGG | + | tig0040219:14580-14599 | Msa1459360:intergenic | 40.0% | |
| GTGAAGACAATGAAGGACAA+GGG | - | tig0040219:14723-14742 | Msa1459360:CDS | 40.0% | |
| AAGGGTTTGAACAAGCTTCA+GGG | - | tig0040219:14741-14760 | Msa1459360:CDS | 40.0% | |
| ! | TCAACTTCTGTTTTCCCTGA+TGG | + | tig0040219:15184-15203 | Msa1459360:intergenic | 40.0% |
| !! | AGGTGTTGCTTGTTTAGCTA+TGG | - | tig0040219:15285-15304 | Msa1459360:CDS | 40.0% |
| !! | GGTGTTGCTTGTTTAGCTAT+GGG | - | tig0040219:15286-15305 | Msa1459360:CDS | 40.0% |
| TTAGCTATGGGAGCTTCTAA+TGG | - | tig0040219:15298-15317 | Msa1459360:CDS | 40.0% | |
| CAACATCCTCAACATCAAGA+GGG | - | tig0040219:14144-14163 | Msa1459360:CDS | 40.0% | |
| CATCACCAAATTTCTCAAGG+CGG | - | tig0040219:14176-14195 | Msa1459360:CDS | 40.0% | |
| ATCACCAAATTTCTCAAGGC+GGG | - | tig0040219:14177-14196 | Msa1459360:CDS | 40.0% | |
| TTGAGATGAATCCTCAGTTG+TGG | + | tig0040219:14327-14346 | Msa1459360:intergenic | 40.0% | |
| AACTGAGGATTCATCTCAAG+TGG | - | tig0040219:14328-14347 | Msa1459360:CDS | 40.0% | |
| CATTAGATACTCACCGTTTC+CGG | + | tig0040219:14369-14388 | Msa1459360:intergenic | 40.0% | |
| !! | AGAAATTGGTGGTGTTCCAA+TGG | + | tig0040219:14399-14418 | Msa1459360:intergenic | 40.0% |
| TTCCTGTATCCAAAACTGCA+GGG | + | tig0040219:14424-14443 | Msa1459360:intergenic | 40.0% | |
| AACCATTGTTGCTGCAAGTT+GGG | + | tig0040219:14580-14599 | Msa1459360:intergenic | 40.0% | |
| GTGAAGACAATGAAGGACAA+GGG | - | tig0040219:14723-14742 | Msa1459360:CDS | 40.0% | |
| AAGGGTTTGAACAAGCTTCA+GGG | - | tig0040219:14741-14760 | Msa1459360:CDS | 40.0% | |
| ! | TCAACTTCTGTTTTCCCTGA+TGG | + | tig0040219:15184-15203 | Msa1459360:intergenic | 40.0% |
| !! | AGGTGTTGCTTGTTTAGCTA+TGG | - | tig0040219:15285-15304 | Msa1459360:CDS | 40.0% |
| !! | GGTGTTGCTTGTTTAGCTAT+GGG | - | tig0040219:15286-15305 | Msa1459360:CDS | 40.0% |
| TTAGCTATGGGAGCTTCTAA+TGG | - | tig0040219:15298-15317 | Msa1459360:CDS | 40.0% | |
| !! | TGTCATGTTGGTGACACTAC+TGG | - | tig0040219:14100-14119 | Msa1459360:CDS | 45.0% |
| CCTCTTGATGTTGAGGATGT+TGG | + | tig0040219:14146-14165 | Msa1459360:intergenic | 45.0% | |
| CCAACATCCTCAACATCAAG+AGG | - | tig0040219:14143-14162 | Msa1459360:CDS | 45.0% | |
| GAGAAACCCTCTTGATGTTG+AGG | + | tig0040219:14153-14172 | Msa1459360:intergenic | 45.0% | |
| ! | CGCCTTGAGAAATTTGGTGA+TGG | + | tig0040219:14178-14197 | Msa1459360:intergenic | 45.0% |
| CAACATGGCGAAGAGTGATT+CGG | + | tig0040219:14205-14224 | Msa1459360:intergenic | 45.0% | |
| ! | CACTCTTCGCCATGTTGATT+CGG | - | tig0040219:14208-14227 | Msa1459360:CDS | 45.0% |
| !! | ACTCTTCGCCATGTTGATTC+GGG | - | tig0040219:14209-14228 | Msa1459360:CDS | 45.0% |
| AGTTCTTGCCCGAATCAACA+TGG | + | tig0040219:14220-14239 | Msa1459360:intergenic | 45.0% | |
| GTTAGCATCATCCACAACTG+AGG | - | tig0040219:14313-14332 | Msa1459360:CDS | 45.0% | |
| ! | TTCATCTCAAGTGGAAGCAC+CGG | - | tig0040219:14337-14356 | Msa1459360:CDS | 45.0% |
| CGGAAACGGTGAGTATCTAA+TGG | - | tig0040219:14367-14386 | Msa1459360:CDS | 45.0% | |
| ACTGCAGGGTAAGAAATTGG+TGG | + | tig0040219:14410-14429 | Msa1459360:intergenic | 45.0% | |
| !!! | TACCCTGCAGTTTTGGATAC+AGG | - | tig0040219:14419-14438 | Msa1459360:CDS | 45.0% |
| CTTCCTGTATCCAAAACTGC+AGG | + | tig0040219:14425-14444 | Msa1459360:intergenic | 45.0% | |
| !! | GGGAAGGTAAAGCATTGCAT+AGG | + | tig0040219:14559-14578 | Msa1459360:intergenic | 45.0% |
| ACCATTGTTGCTGCAAGTTG+GGG | + | tig0040219:14579-14598 | Msa1459360:intergenic | 45.0% | |
| CAACCATTGTTGCTGCAAGT+TGG | + | tig0040219:14581-14600 | Msa1459360:intergenic | 45.0% | |
| GGTTGTGGTGAAGACAATGA+AGG | - | tig0040219:14716-14735 | Msa1459360:CDS | 45.0% | |
| GGTGAAGACAATGAAGGACA+AGG | - | tig0040219:14722-14741 | Msa1459360:CDS | 45.0% | |
| CAAGGGTTTGAACAAGCTTC+AGG | - | tig0040219:14740-14759 | Msa1459360:CDS | 45.0% | |
| GTTTGAACAAGCTTCAGGGT+TGG | - | tig0040219:14745-14764 | Msa1459360:CDS | 45.0% | |
| !!! | TGGAGGTGTTACCTGTTTTG+TGG | + | tig0040219:14900-14919 | Msa1459360:intergenic | 45.0% |
| !! | GAGGTTAGTGATGATGGAAG+TGG | - | tig0040219:15016-15035 | Msa1459360:CDS | 45.0% |
| !! | GTTAGTGATGATGGAAGTGG+TGG | - | tig0040219:15019-15038 | Msa1459360:CDS | 45.0% |
| GTTGAACCCGATTTATCGAC+CGG | + | tig0040219:15136-15155 | Msa1459360:intergenic | 45.0% | |
| GTCGATAAATCGGGTTCAAC+TGG | - | tig0040219:15136-15155 | Msa1459360:CDS | 45.0% | |
| !! | TGTCATGTTGGTGACACTAC+TGG | - | tig0040219:14100-14119 | Msa1459360:CDS | 45.0% |
| CCTCTTGATGTTGAGGATGT+TGG | + | tig0040219:14146-14165 | Msa1459360:intergenic | 45.0% | |
| CCAACATCCTCAACATCAAG+AGG | - | tig0040219:14143-14162 | Msa1459360:CDS | 45.0% | |
| GAGAAACCCTCTTGATGTTG+AGG | + | tig0040219:14153-14172 | Msa1459360:intergenic | 45.0% | |
| ! | CGCCTTGAGAAATTTGGTGA+TGG | + | tig0040219:14178-14197 | Msa1459360:intergenic | 45.0% |
| CAACATGGCGAAGAGTGATT+CGG | + | tig0040219:14205-14224 | Msa1459360:intergenic | 45.0% | |
| ! | CACTCTTCGCCATGTTGATT+CGG | - | tig0040219:14208-14227 | Msa1459360:CDS | 45.0% |
| !! | ACTCTTCGCCATGTTGATTC+GGG | - | tig0040219:14209-14228 | Msa1459360:CDS | 45.0% |
| AGTTCTTGCCCGAATCAACA+TGG | + | tig0040219:14220-14239 | Msa1459360:intergenic | 45.0% | |
| GTTAGCATCATCCACAACTG+AGG | - | tig0040219:14313-14332 | Msa1459360:CDS | 45.0% | |
| ! | TTCATCTCAAGTGGAAGCAC+CGG | - | tig0040219:14337-14356 | Msa1459360:CDS | 45.0% |
| CGGAAACGGTGAGTATCTAA+TGG | - | tig0040219:14367-14386 | Msa1459360:CDS | 45.0% | |
| ACTGCAGGGTAAGAAATTGG+TGG | + | tig0040219:14410-14429 | Msa1459360:intergenic | 45.0% | |
| !!! | TACCCTGCAGTTTTGGATAC+AGG | - | tig0040219:14419-14438 | Msa1459360:CDS | 45.0% |
| CTTCCTGTATCCAAAACTGC+AGG | + | tig0040219:14425-14444 | Msa1459360:intergenic | 45.0% | |
| !! | GGGAAGGTAAAGCATTGCAT+AGG | + | tig0040219:14559-14578 | Msa1459360:intergenic | 45.0% |
| ACCATTGTTGCTGCAAGTTG+GGG | + | tig0040219:14579-14598 | Msa1459360:intergenic | 45.0% | |
| CAACCATTGTTGCTGCAAGT+TGG | + | tig0040219:14581-14600 | Msa1459360:intergenic | 45.0% | |
| GGTTGTGGTGAAGACAATGA+AGG | - | tig0040219:14716-14735 | Msa1459360:CDS | 45.0% | |
| GGTGAAGACAATGAAGGACA+AGG | - | tig0040219:14722-14741 | Msa1459360:CDS | 45.0% | |
| CAAGGGTTTGAACAAGCTTC+AGG | - | tig0040219:14740-14759 | Msa1459360:CDS | 45.0% | |
| GTTTGAACAAGCTTCAGGGT+TGG | - | tig0040219:14745-14764 | Msa1459360:CDS | 45.0% | |
| !!! | TGGAGGTGTTACCTGTTTTG+TGG | + | tig0040219:14900-14919 | Msa1459360:intergenic | 45.0% |
| !! | GAGGTTAGTGATGATGGAAG+TGG | - | tig0040219:15016-15035 | Msa1459360:CDS | 45.0% |
| !! | GTTAGTGATGATGGAAGTGG+TGG | - | tig0040219:15019-15038 | Msa1459360:CDS | 45.0% |
| GTTGAACCCGATTTATCGAC+CGG | + | tig0040219:15136-15155 | Msa1459360:intergenic | 45.0% | |
| GTCGATAAATCGGGTTCAAC+TGG | - | tig0040219:15136-15155 | Msa1459360:CDS | 45.0% | |
| GGAACCCGCCTTGAGAAATT+TGG | + | tig0040219:14184-14203 | Msa1459360:intergenic | 50.0% | |
| AAACTCGAGCGCGTTCAACA+TGG | - | tig0040219:14245-14264 | Msa1459360:CDS | 50.0% | |
| GCGTTCAACATGGCATCAAC+CGG | - | tig0040219:14255-14274 | Msa1459360:CDS | 50.0% | |
| CGTTCAACATGGCATCAACC+GGG | - | tig0040219:14256-14275 | Msa1459360:CDS | 50.0% | |
| GTTCAACATGGCATCAACCG+GGG | - | tig0040219:14257-14276 | Msa1459360:CDS | 50.0% | |
| ! | TTGTTGCTGCAAGTTGGGGA+AGG | + | tig0040219:14575-14594 | Msa1459360:intergenic | 50.0% |
| TCCCCAACTTGCAGCAACAA+TGG | - | tig0040219:14575-14594 | Msa1459360:CDS | 50.0% | |
| ! | GAACAAGCTTCAGGGTTGGT+TGG | - | tig0040219:14749-14768 | Msa1459360:CDS | 50.0% |
| !! | GCTTCAGGGTTGGTTGGATT+AGG | - | tig0040219:14755-14774 | Msa1459360:CDS | 50.0% |
| AGGACGTGGTCCTTTGTCTT+TGG | - | tig0040219:14775-14794 | Msa1459360:CDS | 50.0% | |
| ! | GGTGGTGATTTGGAATTGCC+TGG | - | tig0040219:15232-15251 | Msa1459360:CDS | 50.0% |
| GGAACCCGCCTTGAGAAATT+TGG | + | tig0040219:14184-14203 | Msa1459360:intergenic | 50.0% | |
| AAACTCGAGCGCGTTCAACA+TGG | - | tig0040219:14245-14264 | Msa1459360:CDS | 50.0% | |
| GCGTTCAACATGGCATCAAC+CGG | - | tig0040219:14255-14274 | Msa1459360:CDS | 50.0% | |
| CGTTCAACATGGCATCAACC+GGG | - | tig0040219:14256-14275 | Msa1459360:CDS | 50.0% | |
| GTTCAACATGGCATCAACCG+GGG | - | tig0040219:14257-14276 | Msa1459360:CDS | 50.0% | |
| ! | TTGTTGCTGCAAGTTGGGGA+AGG | + | tig0040219:14575-14594 | Msa1459360:intergenic | 50.0% |
| TCCCCAACTTGCAGCAACAA+TGG | - | tig0040219:14575-14594 | Msa1459360:CDS | 50.0% | |
| ! | GAACAAGCTTCAGGGTTGGT+TGG | - | tig0040219:14749-14768 | Msa1459360:CDS | 50.0% |
| !! | GCTTCAGGGTTGGTTGGATT+AGG | - | tig0040219:14755-14774 | Msa1459360:CDS | 50.0% |
| AGGACGTGGTCCTTTGTCTT+TGG | - | tig0040219:14775-14794 | Msa1459360:CDS | 50.0% | |
| ! | GGTGGTGATTTGGAATTGCC+TGG | - | tig0040219:15232-15251 | Msa1459360:CDS | 50.0% |
| ! | TTTGGAGTCGGCTATGTCCC+CGG | + | tig0040219:14277-14296 | Msa1459360:intergenic | 55.0% |
| !! | GGGTTGGTTGGATTAGGACG+TGG | - | tig0040219:14761-14780 | Msa1459360:CDS | 55.0% |
| ! | TTTGGAGTCGGCTATGTCCC+CGG | + | tig0040219:14277-14296 | Msa1459360:intergenic | 55.0% |
| !! | GGGTTGGTTGGATTAGGACG+TGG | - | tig0040219:14761-14780 | Msa1459360:CDS | 55.0% |
| TCACCGTTTCCGGCGTGAAC+CGG | + | tig0040219:14359-14378 | Msa1459360:intergenic | 60.0% | |
| TCACCGTTTCCGGCGTGAAC+CGG | + | tig0040219:14359-14378 | Msa1459360:intergenic | 60.0% | |
| !! | GTGGAAGCACCGGTTCACGC+CGG | - | tig0040219:14347-14366 | Msa1459360:CDS | 65.0% |
| !! | GCACCGGTTCACGCCGGAAA+CGG | - | tig0040219:14353-14372 | Msa1459360:CDS | 65.0% |
| !! | GTGGAAGCACCGGTTCACGC+CGG | - | tig0040219:14347-14366 | Msa1459360:CDS | 65.0% |
| !! | GCACCGGTTCACGCCGGAAA+CGG | - | tig0040219:14353-14372 | Msa1459360:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0040219 | gene | 14074 | 15423 | 14074 | ID=Msa1459360;Name=Msa1459360 |
| tig0040219 | mRNA | 14074 | 15423 | 14074 | ID=Msa1459360-mRNA-1;Parent=Msa1459360;Name=Msa1459360-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|449 |
| tig0040219 | exon | 14074 | 15423 | 14074 | ID=Msa1459360-mRNA-1:exon:22219;Parent=Msa1459360-mRNA-1 |
| tig0040219 | CDS | 14074 | 15423 | 14074 | ID=Msa1459360-mRNA-1:cds;Parent=Msa1459360-mRNA-1 |
| Gene Sequence |
| Protein sequence |
