Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0036890 | sp|Q9SMK9|PAL2_CICAR | 90.997 | 722 | 60 | 2 | 1 | 722 | 2 | 718 | 0.0 | 1364 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001960 | Msa0036890 | 0.805590 | 1.240569e-49 | -8.615850e-47 |
| Msa0002680 | Msa0036890 | 0.816336 | 5.829777e-52 | -8.615850e-47 |
| Msa0028340 | Msa0036890 | 0.812197 | 4.785667e-51 | -8.615850e-47 |
| Msa0036890 | Msa0052870 | 0.823295 | 1.495935e-53 | -8.615850e-47 |
| Msa0036890 | Msa0071100 | 0.814426 | 1.549902e-51 | -8.615850e-47 |
| Msa0036890 | Msa0084970 | 0.987300 | 9.185621e-170 | -8.615850e-47 |
| Msa0036890 | Msa0089980 | 0.812136 | 4.934771e-51 | -8.615850e-47 |
| Msa0036890 | Msa0090010 | 0.807868 | 4.096881e-50 | -8.615850e-47 |
| Msa0036890 | Msa0101340 | 0.871802 | 5.176771e-67 | -8.615850e-47 |
| Msa0036890 | Msa0106620 | 0.815548 | 8.736149e-52 | -8.615850e-47 |
| Msa0036890 | Msa0116790 | 0.819854 | 9.333495e-53 | -8.615850e-47 |
| Msa0036890 | Msa0124200 | 0.803578 | 3.260824e-49 | -8.615850e-47 |
| Msa0036890 | Msa0130990 | 0.931715 | 2.506561e-94 | -8.615850e-47 |
| Msa0036890 | Msa0145680 | 0.867441 | 1.365968e-65 | -8.615850e-47 |
| Msa0036890 | Msa0155520 | 0.814353 | 1.608520e-51 | -8.615850e-47 |
| Msa0036890 | Msa0162440 | 0.809507 | 1.828935e-50 | -8.615850e-47 |
| Msa0036890 | Msa0168570 | 0.804988 | 1.657930e-49 | -8.615850e-47 |
| Msa0036890 | Msa0174450 | 0.822589 | 2.184465e-53 | -8.615850e-47 |
| Msa0036890 | Msa0176050 | 0.804930 | 1.705337e-49 | -8.615850e-47 |
| Msa0036890 | Msa0176900 | 0.949357 | 1.497548e-107 | -8.615850e-47 |
| Msa0036890 | Msa0187030 | 0.805716 | 1.167226e-49 | -8.615850e-47 |
| Msa0036890 | Msa0192910 | 0.820978 | 5.155249e-53 | -8.615850e-47 |
| Msa0036890 | Msa0211200 | 0.820660 | 6.100152e-53 | -8.615850e-47 |
| Msa0036890 | Msa0235110 | 0.808867 | 2.507745e-50 | -8.615850e-47 |
| Msa0036890 | Msa0244900 | 0.810522 | 1.105243e-50 | -8.615850e-47 |
| Msa0036890 | Msa0307270 | 0.801746 | 7.785337e-49 | -8.615850e-47 |
| Msa0036890 | Msa0307570 | 0.821989 | 3.010475e-53 | -8.615850e-47 |
| Msa0036890 | Msa0327670 | 0.836810 | 7.522755e-57 | -8.615850e-47 |
| Msa0036890 | Msa0328730 | 0.842437 | 2.587497e-58 | -8.615850e-47 |
| Msa0036890 | Msa0335360 | 0.803086 | 4.123780e-49 | -8.615850e-47 |
| Msa0036890 | Msa0400420 | 0.803134 | 4.029859e-49 | -8.615850e-47 |
| Msa0036890 | Msa0427700 | 0.841895 | 3.600998e-58 | -8.615850e-47 |
| Msa0036890 | Msa0519760 | 0.842499 | 2.491458e-58 | -8.615850e-47 |
| Msa0036890 | Msa0519810 | 0.832707 | 8.108773e-56 | -8.615850e-47 |
| Msa0036890 | Msa0519840 | 0.840408 | 8.856105e-58 | -8.615850e-47 |
| Msa0036890 | Msa0528570 | 0.800778 | 1.228509e-48 | -8.615850e-47 |
| Msa0036890 | Msa0549360 | 0.811973 | 5.353894e-51 | -8.615850e-47 |
| Msa0036890 | Msa0561410 | 0.824098 | 9.700922e-54 | -8.615850e-47 |
| Msa0036890 | Msa0568800 | 0.805491 | 1.301333e-49 | -8.615850e-47 |
| Msa0036890 | Msa0571290 | 0.828095 | 1.087421e-54 | -8.615850e-47 |
| Msa0036890 | Msa0572750 | 0.808293 | 3.326220e-50 | -8.615850e-47 |
| Msa0036890 | Msa0579660 | 0.810363 | 1.196538e-50 | -8.615850e-47 |
| Msa0036890 | Msa0586450 | 0.818796 | 1.625913e-52 | -8.615850e-47 |
| Msa0036890 | Msa0597770 | 0.801062 | 1.075156e-48 | -8.615850e-47 |
| Msa0036890 | Msa0601950 | 0.804466 | 2.130990e-49 | -8.615850e-47 |
| Msa0036890 | Msa0612350 | 0.816074 | 6.671188e-52 | -8.615850e-47 |
| Msa0036890 | Msa0615290 | 0.823213 | 1.563470e-53 | -8.615850e-47 |
| Msa0036890 | Msa0619050 | 0.809424 | 1.905535e-50 | -8.615850e-47 |
| Msa0036890 | Msa0626270 | 0.839693 | 1.359879e-57 | -8.615850e-47 |
| Msa0036890 | Msa0626450 | 0.816296 | 5.950121e-52 | -8.615850e-47 |
| Msa0036890 | Msa0626460 | 0.841115 | 5.779439e-58 | -8.615850e-47 |
| Msa0036890 | Msa0626490 | 0.812698 | 3.720077e-51 | -8.615850e-47 |
| Msa0036890 | Msa0630940 | 0.803285 | 3.749815e-49 | -8.615850e-47 |
| Msa0036890 | Msa0657660 | 0.828701 | 7.766992e-55 | -8.615850e-47 |
| Msa0036890 | Msa0659120 | 0.800404 | 1.464268e-48 | -8.615850e-47 |
| Msa0036890 | Msa0664090 | 0.804115 | 2.521543e-49 | -8.615850e-47 |
| Msa0036890 | Msa0664540 | 0.842933 | 1.909889e-58 | -8.615850e-47 |
| Msa0036890 | Msa0664600 | 0.823158 | 1.610191e-53 | -8.615850e-47 |
| Msa0036890 | Msa0687580 | 0.823560 | 1.297249e-53 | -8.615850e-47 |
| Msa0036890 | Msa0692880 | 0.815854 | 7.466556e-52 | -8.615850e-47 |
| Msa0036890 | Msa0698100 | 0.814257 | 1.689439e-51 | -8.615850e-47 |
| Msa0036890 | Msa0698290 | 0.811989 | 5.311945e-51 | -8.615850e-47 |
| Msa0036890 | Msa0702720 | 0.806729 | 7.140963e-50 | -8.615850e-47 |
| Msa0036890 | Msa0706760 | 0.813900 | 2.025399e-51 | -8.615850e-47 |
| Msa0036890 | Msa0751260 | 0.814648 | 1.384202e-51 | -8.615850e-47 |
| Msa0036890 | Msa0756620 | 0.826745 | 2.291913e-54 | -8.615850e-47 |
| Msa0036890 | Msa0783850 | 0.806589 | 7.643516e-50 | -8.615850e-47 |
| Msa0036890 | Msa0795070 | 0.806950 | 6.412635e-50 | -8.615850e-47 |
| Msa0036890 | Msa0797920 | 0.807402 | 5.143728e-50 | -8.615850e-47 |
| Msa0036890 | Msa0835970 | 0.812096 | 5.035653e-51 | -8.615850e-47 |
| Msa0036890 | Msa0871720 | 0.806983 | 6.311547e-50 | -8.615850e-47 |
| Msa0036890 | Msa0910150 | 0.808267 | 3.368467e-50 | -8.615850e-47 |
| Msa0036890 | Msa0945490 | 0.810837 | 9.451300e-51 | -8.615850e-47 |
| Msa0036890 | Msa0960420 | 0.803686 | 3.096940e-49 | -8.615850e-47 |
| Msa0036890 | Msa0979180 | 0.803669 | 3.121484e-49 | -8.615850e-47 |
| Msa0036890 | Msa0984540 | 0.811271 | 7.610652e-51 | -8.615850e-47 |
| Msa0036890 | Msa0993740 | 0.814954 | 1.184209e-51 | -8.615850e-47 |
| Msa0036890 | Msa1027990 | 0.802095 | 6.598976e-49 | -8.615850e-47 |
| Msa0036890 | Msa1028280 | 0.835493 | 1.624985e-56 | -8.615850e-47 |
| Msa0036890 | Msa1031390 | 0.815970 | 7.035042e-52 | -8.615850e-47 |
| Msa0036890 | Msa1074890 | 0.804638 | 1.962624e-49 | -8.615850e-47 |
| Msa0036890 | Msa1085330 | 0.861854 | 7.655496e-64 | -8.615850e-47 |
| Msa0036890 | Msa1115740 | 0.809293 | 2.032383e-50 | -8.615850e-47 |
| Msa0036890 | Msa1116400 | 0.815839 | 7.524735e-52 | -8.615850e-47 |
| Msa0036890 | Msa1155900 | 0.811734 | 6.036508e-51 | -8.615850e-47 |
| Msa0036890 | Msa1160920 | 0.802402 | 5.706793e-49 | -8.615850e-47 |
| Msa0036890 | Msa1175430 | 0.807903 | 4.026740e-50 | -8.615850e-47 |
| Msa0036890 | Msa1192120 | 0.822134 | 2.787277e-53 | -8.615850e-47 |
| Msa0036890 | Msa1196640 | 0.814308 | 1.646052e-51 | -8.615850e-47 |
| Msa0036890 | Msa1219830 | 0.801186 | 1.013894e-48 | -8.615850e-47 |
| Msa0036890 | Msa1267040 | 0.828912 | 6.905748e-55 | -8.615850e-47 |
| Msa0036890 | Msa1267170 | 0.829302 | 5.553416e-55 | -8.615850e-47 |
| Msa0036890 | Msa1341840 | 0.827324 | 1.665777e-54 | -8.615850e-47 |
| Msa0036890 | Msa1348090 | 0.839768 | 1.300163e-57 | -8.615850e-47 |
| Msa0036890 | Msa1382710 | 0.835256 | 1.865245e-56 | -8.615850e-47 |
| Msa0036890 | Msa1409490 | 0.813969 | 1.955872e-51 | -8.615850e-47 |
| Msa0036890 | Msa1427110 | 0.845483 | 3.948342e-59 | -8.615850e-47 |
| Msa0036890 | Msa1428740 | 0.843618 | 1.254371e-58 | -8.615850e-47 |
| Msa0036890 | Msa1440900 | 0.813283 | 2.768893e-51 | -8.615850e-47 |
| Msa0036890 | Msa1440960 | 0.812411 | 4.297335e-51 | -8.615850e-47 |
| Msa0036890 | Msa1459360 | 0.881353 | 2.575699e-70 | -8.615850e-47 |
| Msa0036890 | Msa1459460 | 0.842839 | 2.023647e-58 | -8.615850e-47 |
| Msa0036890 | Msa1461370 | 0.831841 | 1.327726e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0036890 | MtrunA17_Chr1g0199551 | 94.737 | 722 | 38 | 0 | 1 | 722 | 1 | 722 | 0.0 | 1426 |
| Msa0036890 | MtrunA17_Chr1g0181091 | 81.636 | 697 | 128 | 0 | 26 | 722 | 16 | 712 | 0.0 | 1209 |
| Msa0036890 | MtrunA17_Chr7g0264351 | 82.014 | 695 | 125 | 0 | 28 | 722 | 30 | 724 | 0.0 | 1206 |
| Msa0036890 | MtrunA17_Chr7g0264311 | 81.871 | 695 | 126 | 0 | 28 | 722 | 30 | 724 | 0.0 | 1206 |
| Msa0036890 | MtrunA17_Chr7g0264341 | 81.583 | 695 | 128 | 0 | 28 | 722 | 30 | 724 | 0.0 | 1202 |
| Msa0036890 | MtrunA17_Chr2g0326921 | 72.166 | 697 | 186 | 4 | 29 | 721 | 5 | 697 | 0.0 | 1033 |
| Msa0036890 | MtrunA17_Chr5g0448361 | 69.452 | 694 | 210 | 2 | 29 | 721 | 16 | 708 | 0.0 | 1019 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0036890 | AT3G53260.1 | 78.873 | 710 | 144 | 1 | 19 | 722 | 8 | 717 | 0.0 | 1193 |
| Msa0036890 | AT2G37040.1 | 77.686 | 726 | 157 | 2 | 1 | 722 | 1 | 725 | 0.0 | 1192 |
| Msa0036890 | AT3G10340.1 | 77.401 | 708 | 157 | 3 | 17 | 722 | 1 | 707 | 0.0 | 1155 |
| Msa0036890 | AT5G04230.1 | 70.977 | 696 | 186 | 6 | 30 | 722 | 12 | 694 | 0.0 | 1016 |
| Msa0036890 | AT5G04230.2 | 70.571 | 700 | 186 | 7 | 30 | 722 | 12 | 698 | 0.0 | 1009 |
Find 186 sgRNAs with CRISPR-Local
Find 384 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTTGGCCTTCCAATTAAA+AGG | 0.205075 | 1_1:-65733392 | None:intergenic |
| CCTCAAAAGCTCCAATCTTT+TGG | 0.213487 | 1_1:-65734598 | None:intergenic |
| TATTGATGTTTCAAGGAATA+TGG | 0.225643 | 1_1:+65733908 | Msa0036890:CDS |
| AATTGAGGCTGCTGCTATTA+TGG | 0.231999 | 1_1:+65733692 | Msa0036890:CDS |
| CAAAGGGTCATTGTTGTTAC+TGG | 0.232524 | 1_1:-65729016 | None:intergenic |
| CTACATTCCTTGATCATATT+AGG | 0.256307 | 1_1:-65734695 | None:intergenic |
| GAAGAAATTGAGGCTGATTA+AGG | 0.268813 | 1_1:-65728892 | None:intergenic |
| TATATATGTTATATTGTATA+GGG | 0.269837 | 1_1:-65728795 | None:intergenic |
| TGCTGACAGGTGAGAAAATT+AGG | 0.277184 | 1_1:+65734765 | Msa0036890:CDS |
| AAATAAACATTACATGAAAA+AGG | 0.283789 | 1_1:-65734957 | None:intergenic |
| CTAAGGGCACAACCGGTTTC+CGG | 0.296842 | 1_1:-65729110 | None:intergenic |
| TCAAAATCTATTGGACCTAA+TGG | 0.305142 | 1_1:+65733414 | Msa0036890:CDS |
| TGGATCAGGTTTGGCTTCAT+TGG | 0.306429 | 1_1:+65733542 | Msa0036890:CDS |
| GCATTCAGAACTTGTCCATT+AGG | 0.307197 | 1_1:-65733429 | None:intergenic |
| GCTAGGGTTCAAGTTGAAAA+TGG | 0.308466 | 1_1:+65734659 | Msa0036890:CDS |
| CAACAATGACCCTTTGAATT+GGG | 0.317046 | 1_1:+65729023 | Msa0036890:CDS |
| ACTAGTGCTAAACCTTCTTT+AGG | 0.318031 | 1_1:-65733504 | None:intergenic |
| CAACTAGCTGGAATTGAAAC+TGG | 0.324510 | 1_1:+65733465 | Msa0036890:CDS |
| TGCTAGCCGCAATCCAAGTT+TGG | 0.335095 | 1_1:+65734082 | Msa0036890:CDS |
| TCCACCATTGCAAAGATTCA+TGG | 0.339048 | 1_1:-65728986 | None:intergenic |
| AACCAAGATGTTAACTCTTT+AGG | 0.341255 | 1_1:+65734209 | Msa0036890:CDS |
| CGCAATCCAAGTTTGGATTA+CGG | 0.346277 | 1_1:+65734089 | Msa0036890:CDS |
| AGGCCAAATTCAAAATCTAT+TGG | 0.352492 | 1_1:+65733405 | Msa0036890:CDS |
| ACAACAATGACCCTTTGAAT+TGG | 0.354806 | 1_1:+65729022 | Msa0036890:CDS |
| GGGAGGAATTTGTGGGATAT+AGG | 0.356468 | 1_1:-65728774 | None:intergenic |
| ATTCCTTTAGCATATGTTGC+TGG | 0.359407 | 1_1:+65733369 | Msa0036890:CDS |
| TGTCTCAGCTTCTGCATTAG+AGG | 0.360021 | 1_1:-65734512 | None:intergenic |
| AGTTCATAAGAGAAACTTTA+GGG | 0.361370 | 1_1:+65734735 | Msa0036890:CDS |
| TACTGCAGTTGGATCAGGTT+TGG | 0.362782 | 1_1:+65733533 | Msa0036890:CDS |
| GCAGTGATTGTACCTCTTAA+TGG | 0.365126 | 1_1:-65733333 | None:intergenic |
| ACATTGCTTCAAGGATATTC+AGG | 0.370009 | 1_1:+65733246 | Msa0036890:CDS |
| AGATGGAAGTTATTATCTTA+AGG | 0.370273 | 1_1:+65733725 | Msa0036890:CDS |
| TCCTTCTCACAAAACCTTGA+TGG | 0.371743 | 1_1:-65734422 | None:intergenic |
| TGCAACAGATTTCTGAATGC+TGG | 0.371910 | 1_1:+65733144 | Msa0036890:intron |
| CCAATCACTACTAGCTTTAA+CGG | 0.372093 | 1_1:-65729223 | None:intergenic |
| TACCATCGTGGCGGTTGAAC+TGG | 0.393129 | 1_1:+65729182 | Msa0036890:CDS |
| ATCCACTTATTGATGTTTCA+AGG | 0.393519 | 1_1:+65733901 | Msa0036890:CDS |
| GTAGCACAATCCTAGCAAAT+AGG | 0.399936 | 1_1:-65734890 | None:intergenic |
| TCAAGGAATATGGCACTTCA+TGG | 0.407244 | 1_1:+65733918 | Msa0036890:CDS |
| GTTGATCATGCATTGCAAAA+TGG | 0.407281 | 1_1:+65734542 | Msa0036890:CDS |
| ATCGCGTATCTATCTTGTTT+AGG | 0.408011 | 1_1:-65733786 | None:intergenic |
| TTTCCACCTCTTTAGGCAAA+AGG | 0.408359 | 1_1:-65734634 | None:intergenic |
| CATGCCTGCTCTTGTGGCTG+TGG | 0.413922 | 1_1:-65733208 | None:intergenic |
| AGGAATCAGATTTGAAATCA+TGG | 0.416143 | 1_1:+65733266 | Msa0036890:CDS |
| CGGAAACCGGTTGTGCCCTT+AGG | 0.420331 | 1_1:+65729111 | Msa0036890:CDS |
| TGTGCCAAGCTATTGATCTA+AGG | 0.425341 | 1_1:+65734306 | Msa0036890:CDS |
| ACCTGATGAGTTCACTTTGA+AGG | 0.426969 | 1_1:-65729338 | None:intergenic |
| GATATAGGTGAATGGCAGTT+AGG | 0.429241 | 1_1:-65728759 | None:intergenic |
| AATGGTACTGCAGTTGGATC+AGG | 0.429438 | 1_1:+65733528 | Msa0036890:CDS |
| TTCCTTGAAACATCAATAAG+TGG | 0.432083 | 1_1:-65733903 | None:intergenic |
| AAGTTCATAAGAGAAACTTT+AGG | 0.433340 | 1_1:+65734734 | Msa0036890:CDS |
| TTTCCACCTAAGGGCACAAC+CGG | 0.434202 | 1_1:-65729117 | None:intergenic |
| TGATCATAGGAAATGGGAAA+TGG | 0.436122 | 1_1:-65728675 | None:intergenic |
| CGGCTAGCAGTGAGATTTGA+AGG | 0.436480 | 1_1:-65734068 | None:intergenic |
| GTGGTTGATAGTATGAATAA+AGG | 0.440659 | 1_1:+65729246 | Msa0036890:CDS |
| GGCGGTTGAACTGGCGGAAG+AGG | 0.442005 | 1_1:+65729191 | Msa0036890:CDS |
| TTGTATAGGGGAGGAATTTG+TGG | 0.444238 | 1_1:-65728782 | None:intergenic |
| GTATTGAAGTTCTGAACAAT+AGG | 0.446436 | 1_1:-65734141 | None:intergenic |
| CTATATATGTTATATTGTAT+AGG | 0.447469 | 1_1:-65728796 | None:intergenic |
| GAAGACATGGTGTTATGTTA+TGG | 0.450134 | 1_1:-65733311 | None:intergenic |
| CGTTTAGCCATTGCTTCCAT+TGG | 0.450648 | 1_1:+65733987 | Msa0036890:CDS |
| AACCAACATGCCTGCTCTTG+TGG | 0.452957 | 1_1:-65733214 | None:intergenic |
| TATGGAGTGACCACTGGGTT+TGG | 0.453303 | 1_1:+65729279 | Msa0036890:CDS |
| TGAGGTGAAGCGTATGGTAG+AGG | 0.454428 | 1_1:+65729083 | Msa0036890:CDS |
| CCGTTAAAGCTAGTAGTGAT+TGG | 0.454848 | 1_1:+65729223 | Msa0036890:CDS |
| ACACCATGTCTTCCATTAAG+AGG | 0.455708 | 1_1:+65733321 | Msa0036890:CDS |
| GTTTCAACTTATGAATCAAA+TGG | 0.458671 | 1_1:-65733656 | None:intergenic |
| AGAGGTACAATCACTGCATC+AGG | 0.458933 | 1_1:+65733339 | Msa0036890:CDS |
| TGCATTGCAAAATGGTGATA+AGG | 0.460091 | 1_1:+65734550 | Msa0036890:CDS |
| ATTCTCACAGTTGGTGTCAA+TGG | 0.460157 | 1_1:+65734389 | Msa0036890:CDS |
| CCCTTCAAAGTGAACTCATC+AGG | 0.460498 | 1_1:+65729337 | Msa0036890:CDS |
| CGAACATCACCGCAGTGGCT+TGG | 0.467832 | 1_1:+65733810 | Msa0036890:CDS |
| TTGAAGCCGTAATCCAAACT+TGG | 0.469165 | 1_1:-65734095 | None:intergenic |
| AAAGAGGCATTTCAACTAGC+TGG | 0.470037 | 1_1:+65733453 | Msa0036890:CDS |
| GATTTACTCAATGTTGTTGA+AGG | 0.472171 | 1_1:+65734443 | Msa0036890:CDS |
| TTCCACCTCTTTAGGCAAAA+GGG | 0.473173 | 1_1:-65734633 | None:intergenic |
| GATAGCTATGGAGTGACCAC+TGG | 0.474320 | 1_1:+65729273 | Msa0036890:CDS |
| TGGTTGATAGTATGAATAAA+GGG | 0.479080 | 1_1:+65729247 | Msa0036890:CDS |
| TGTATAGGGGAGGAATTTGT+GGG | 0.487300 | 1_1:-65728781 | None:intergenic |
| TTTGAGTTGCAACCTAAAGA+AGG | 0.487825 | 1_1:+65733492 | Msa0036890:CDS |
| GTTGTGCCCTTAGGTGGAAA+AGG | 0.495345 | 1_1:+65729120 | Msa0036890:CDS |
| TCCATGAATCTTTGCAATGG+TGG | 0.496445 | 1_1:+65728985 | Msa0036890:CDS |
| CCTGATGAGTTCACTTTGAA+GGG | 0.497056 | 1_1:-65729337 | None:intergenic |
| AGCCTAAAGAGTTAACATCT+TGG | 0.498300 | 1_1:-65734211 | None:intergenic |
| ATGCCTGCTCTTGTGGCTGT+GGG | 0.500154 | 1_1:-65733207 | None:intergenic |
| CTAAAGAGGTGGAAAATGCT+AGG | 0.500407 | 1_1:+65734642 | Msa0036890:CDS |
| TCCCATGTTGGATTGTCTAA+AGG | 0.502948 | 1_1:+65734847 | Msa0036890:CDS |
| CGTTAAAGCTAGTAGTGATT+GGG | 0.503606 | 1_1:+65729224 | Msa0036890:CDS |
| AAATTTACTAGTTGTTCTCT+CGG | 0.506721 | 1_1:+65733578 | Msa0036890:CDS |
| ATAATTAACAAATAAGATCA+TGG | 0.506881 | 1_1:+65728921 | Msa0036890:exon |
| ATCAAATGGTCAGTGAATTG+AGG | 0.509685 | 1_1:-65733642 | None:intergenic |
| TTCAGTTCCTAATATGATCA+AGG | 0.512088 | 1_1:+65734688 | Msa0036890:CDS |
| AACAATGACCCTTTGAATTG+GGG | 0.517697 | 1_1:+65729024 | Msa0036890:CDS |
| ACCAACTGTGAGAATTCTCT+TGG | 0.519185 | 1_1:-65734381 | None:intergenic |
| AGCAAACATAAGTTTACCAA+TGG | 0.521443 | 1_1:-65734003 | None:intergenic |
| AACAATAGCACAAGTGGCTG+CGG | 0.522595 | 1_1:+65729146 | Msa0036890:CDS |
| AGTTTGGATTACGGCTTCAA+AGG | 0.525060 | 1_1:+65734098 | Msa0036890:CDS |
| CCATACGCTTCACCTCATCT+AGG | 0.525749 | 1_1:-65729077 | None:intergenic |
| GGTAGAGGAATACCGGAAAC+CGG | 0.526167 | 1_1:+65729098 | Msa0036890:CDS |
| ACCTGGTGAGGAATGTGATA+AGG | 0.527766 | 1_1:+65734790 | Msa0036890:CDS |
| AAACCGGTTGTGCCCTTAGG+TGG | 0.529697 | 1_1:+65729114 | Msa0036890:CDS |
| CTAGTGAATGGTACTGCAGT+TGG | 0.530990 | 1_1:+65733522 | Msa0036890:CDS |
| TCTTGTTTAGGCTTCTGAAG+TGG | 0.531050 | 1_1:-65733774 | None:intergenic |
| TTAGGGACAAGTTTGCTGAC+AGG | 0.531897 | 1_1:+65734752 | Msa0036890:CDS |
| TCTCTTATGAACTTGTACAA+TGG | 0.534620 | 1_1:-65734725 | None:intergenic |
| AGCGTATGGTAGAGGAATAC+CGG | 0.537269 | 1_1:+65729091 | Msa0036890:CDS |
| TTGATCATATTAGGAACTGA+AGG | 0.538404 | 1_1:-65734686 | None:intergenic |
| TATGGCTGCAGATTCTATGA+AGG | 0.539419 | 1_1:+65729047 | Msa0036890:CDS |
| CTTTGAACATGAGTGGTGAC+AGG | 0.539854 | 1_1:-65734173 | None:intergenic |
| GAAGGTTTAGCACTAGTGAA+TGG | 0.540506 | 1_1:+65733510 | Msa0036890:CDS |
| TGCTCCTCTACCTATTTGCT+AGG | 0.540972 | 1_1:+65734880 | Msa0036890:CDS |
| ACTTCATCCTGGTCAAATTG+AGG | 0.542522 | 1_1:+65733677 | Msa0036890:CDS |
| AGAATCAACACATTGCTTCA+AGG | 0.544518 | 1_1:+65733237 | Msa0036890:CDS |
| CAATCCTAGCAAATAGGTAG+AGG | 0.545332 | 1_1:-65734884 | None:intergenic |
| CCTCCCACAGCCACAAGAGC+AGG | 0.545619 | 1_1:+65733204 | Msa0036890:CDS |
| AGGCCAGCAACATATGCTAA+AGG | 0.547360 | 1_1:-65733372 | None:intergenic |
| TCAAATGGAGATAATAGCAA+TGG | 0.548037 | 1_1:+65728949 | Msa0036890:CDS |
| TGACCCTTTGAATTGGGGTA+TGG | 0.549794 | 1_1:+65729029 | Msa0036890:CDS |
| ACAAGTTCTGAATGCTAAAG+AGG | 0.551455 | 1_1:+65733437 | Msa0036890:CDS |
| ATGGTGAGTTGCATCCATCA+AGG | 0.558706 | 1_1:+65734408 | Msa0036890:CDS |
| GAAAATTAGGTCACCTGGTG+AGG | 0.558787 | 1_1:+65734778 | Msa0036890:CDS |
| CAGCCATACCCCAATTCAAA+GGG | 0.559111 | 1_1:-65729032 | None:intergenic |
| GCCAAGAGAATTCTCACAGT+TGG | 0.559513 | 1_1:+65734380 | Msa0036890:CDS |
| TTATGATGATGAAGAAATTG+AGG | 0.560194 | 1_1:-65728902 | None:intergenic |
| AATAAGTGGATTGTCATTCA+CGG | 0.561129 | 1_1:-65733889 | None:intergenic |
| AGAGGGTATGTAGCACTGCA+AGG | 0.563580 | 1_1:-65734494 | None:intergenic |
| TCACAGCACTGTGTGATGGA+AGG | 0.566358 | 1_1:+65734816 | Msa0036890:CDS |
| AATTTCCAAGGTACACCGAT+TGG | 0.566709 | 1_1:+65733945 | Msa0036890:CDS |
| AAGGTTTATTGATCCCATGT+TGG | 0.570229 | 1_1:+65734835 | Msa0036890:CDS |
| ATACACCAATCGGTGTACCT+TGG | 0.570750 | 1_1:-65733950 | None:intergenic |
| TCTTCCATGAATCTTTGCAA+TGG | 0.570876 | 1_1:+65728982 | Msa0036890:CDS |
| CCTGCTCTTGTGGCTGTGGG+AGG | 0.571117 | 1_1:-65733204 | None:intergenic |
| ATTTGTGGGATATAGGTGAA+TGG | 0.573685 | 1_1:-65728767 | None:intergenic |
| TTGGCACAATGCTACTAAGA+AGG | 0.573844 | 1_1:-65734291 | None:intergenic |
| AATAAAGGGACTGATAGCTA+TGG | 0.573860 | 1_1:+65729261 | Msa0036890:CDS |
| ACGCAACAAAGATGATTGAG+AGG | 0.576256 | 1_1:+65733856 | Msa0036890:CDS |
| TTATCCATCGATACACCAAT+CGG | 0.577310 | 1_1:-65733960 | None:intergenic |
| TGTGCCTTAGATCAATAGCT+TGG | 0.582659 | 1_1:-65734310 | None:intergenic |
| TAAAGAGGTGGAAAATGCTA+GGG | 0.582840 | 1_1:+65734643 | Msa0036890:CDS |
| CTCCTTTAGACAATCCAACA+TGG | 0.584218 | 1_1:-65734849 | None:intergenic |
| CATAAGTTGAAACTTCATCC+TGG | 0.584696 | 1_1:+65733666 | Msa0036890:CDS |
| AAGTTTACCAATGGAAGCAA+TGG | 0.586687 | 1_1:-65733994 | None:intergenic |
| GATAATAGCAATGGTTGTAA+CGG | 0.587621 | 1_1:+65728958 | Msa0036890:CDS |
| GCAGCCATACCCCAATTCAA+AGG | 0.588052 | 1_1:-65729033 | None:intergenic |
| TGATCATATTAGGAACTGAA+GGG | 0.589476 | 1_1:-65734685 | None:intergenic |
| GGTGAGAAAATTAGGTCACC+TGG | 0.591426 | 1_1:+65734773 | Msa0036890:CDS |
| GTCTCAGCTTCTGCATTAGA+GGG | 0.593808 | 1_1:-65734511 | None:intergenic |
| AGGTTTAACAATAGCACAAG+TGG | 0.595101 | 1_1:+65729140 | Msa0036890:CDS |
| TATTGATCTAAGGCACATTG+AGG | 0.597254 | 1_1:+65734316 | Msa0036890:CDS |
| ACCTTATCACATTCCTCACC+AGG | 0.598892 | 1_1:-65734791 | None:intergenic |
| TGTTGGATTGTCTAAAGGAG+TGG | 0.600217 | 1_1:+65734852 | Msa0036890:CDS |
| CCTAGATGAGGTGAAGCGTA+TGG | 0.602524 | 1_1:+65729077 | Msa0036890:CDS |
| CATCGTGGCGGTTGAACTGG+CGG | 0.602744 | 1_1:+65729185 | Msa0036890:CDS |
| CTTCATGGAGGAAATTTCCA+AGG | 0.609850 | 1_1:+65733933 | Msa0036890:CDS |
| TACACCGATTGGTGTATCGA+TGG | 0.610433 | 1_1:+65733956 | Msa0036890:CDS |
| ATAGCTATGGAGTGACCACT+GGG | 0.616078 | 1_1:+65729274 | Msa0036890:CDS |
| GAGGGTATGTAGCACTGCAA+GGG | 0.617118 | 1_1:-65734493 | None:intergenic |
| GTGAATGACATCTATAGCAA+CGG | 0.618845 | 1_1:+65734041 | Msa0036890:CDS |
| ATATATGTTATATTGTATAG+GGG | 0.619769 | 1_1:-65728794 | None:intergenic |
| TAAAGCTAGTAGTGATTGGG+TGG | 0.624133 | 1_1:+65729227 | Msa0036890:CDS |
| GCACAATGCTACTAAGAAGG+TGG | 0.624197 | 1_1:-65734288 | None:intergenic |
| GTACCTCTTAATGGAAGACA+TGG | 0.627273 | 1_1:-65733324 | None:intergenic |
| CGCAACAAAGATGATTGAGA+GGG | 0.628498 | 1_1:+65733857 | Msa0036890:CDS |
| GCAGCAGCCTCAATTTGACC+AGG | 0.628904 | 1_1:-65733684 | None:intergenic |
| CGTAATCCAAACTTGGATTG+CGG | 0.630042 | 1_1:-65734088 | None:intergenic |
| ATGGCTGCAGATTCTATGAA+GGG | 0.630430 | 1_1:+65729048 | Msa0036890:CDS |
| TATGTTATATTGTATAGGGG+AGG | 0.631073 | 1_1:-65728791 | None:intergenic |
| CAAAGGAGCAGAAATTGCAA+TGG | 0.637084 | 1_1:+65734115 | Msa0036890:CDS |
| AGCCACAAGAGCAGGCATGT+TGG | 0.637350 | 1_1:+65733212 | Msa0036890:CDS |
| TCCTTTAGACAATCCAACAT+GGG | 0.644402 | 1_1:-65734848 | None:intergenic |
| TGTCGAATCACTTCAATCTG+CGG | 0.647914 | 1_1:-65733834 | None:intergenic |
| CGCCAGTTCAACCGCCACGA+TGG | 0.649629 | 1_1:-65729184 | None:intergenic |
| ATTGCAAAATGGTGATAAGG+AGG | 0.652869 | 1_1:+65734553 | Msa0036890:CDS |
| GAAGGGTAGTCACCTAGATG+AGG | 0.661131 | 1_1:+65729065 | Msa0036890:CDS |
| GAGTGGTGACAGGATTAGCA+AGG | 0.667400 | 1_1:-65734163 | None:intergenic |
| ATCACTACTAGCTTTAACGG+CGG | 0.674303 | 1_1:-65729220 | None:intergenic |
| TTCAGCACTTTGAACATGAG+TGG | 0.675639 | 1_1:-65734180 | None:intergenic |
| TCACACAGAAGAACAAAACA+AGG | 0.686755 | 1_1:+65729309 | Msa0036890:CDS |
| AGGAATATGGCACTTCATGG+AGG | 0.692048 | 1_1:+65733921 | Msa0036890:CDS |
| GATTGTCTAAAGGAGTGGAA+TGG | 0.692592 | 1_1:+65734857 | Msa0036890:CDS |
| AACTCATAGTACCATCGTGG+CGG | 0.702106 | 1_1:+65729173 | Msa0036890:CDS |
| CGATTCGAACATCACCGCAG+TGG | 0.703444 | 1_1:+65733805 | Msa0036890:CDS |
| ATCTGCGGTCCAAGCCACTG+CGG | 0.717350 | 1_1:-65733819 | None:intergenic |
| TGCAACTCATAGTACCATCG+TGG | 0.734476 | 1_1:+65729170 | Msa0036890:CDS |
| CACAGAAGAACAAAACAAGG+TGG | 0.749750 | 1_1:+65729312 | Msa0036890:CDS |
| TGAGGTTGCACCAAACCCAG+TGG | 0.771981 | 1_1:-65729289 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTTTTTTTTTT+TGG | - | chr1_1:65728647-65728666 | None:intergenic | 0.0% |
| !!! | TAAATAAATATTTTGATCAT+AGG | - | chr1_1:65728691-65728710 | None:intergenic | 10.0% |
| !! | TATATATGTTATATTGTATA+GGG | - | chr1_1:65728798-65728817 | None:intergenic | 10.0% |
| !!! | TTATGTCTAAAATATATTTT+GGG | + | chr1_1:65729965-65729984 | Msa0036890:intron | 10.0% |
| !!! | TAGTTTTTTTTTTTTGTTTT+TGG | - | chr1_1:65730337-65730356 | None:intergenic | 10.0% |
| !!! | TATATAAAAGTTGATTATTT+AGG | - | chr1_1:65730493-65730512 | None:intergenic | 10.0% |
| !! | CTGTAAATTTATTATATAAA+AGG | - | chr1_1:65730572-65730591 | None:intergenic | 10.0% |
| !!! | GAAATACTTAATATTTTATT+TGG | - | chr1_1:65731485-65731504 | None:intergenic | 10.0% |
| !! | TAAGAAAAATGTATAAATAA+AGG | + | chr1_1:65731820-65731839 | Msa0036890:intron | 10.0% |
| !! | AAGAAAAATGTATAAATAAA+GGG | + | chr1_1:65731821-65731840 | Msa0036890:intron | 10.0% |
| !! | AAGATAAATAATATCATATA+AGG | + | chr1_1:65732229-65732248 | Msa0036890:intron | 10.0% |
| !! | AATAAATATGTATAAATGAA+GGG | - | chr1_1:65732561-65732580 | None:intergenic | 10.0% |
| !! | AAATAAATATGTATAAATGA+AGG | - | chr1_1:65732562-65732581 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTTGGTTTGT+AGG | - | chr1_1:65728640-65728659 | None:intergenic | 15.0% |
| !! | ATATATGTTATATTGTATAG+GGG | - | chr1_1:65728797-65728816 | None:intergenic | 15.0% |
| !! | CTATATATGTTATATTGTAT+AGG | - | chr1_1:65728799-65728818 | None:intergenic | 15.0% |
| !! | ATAATTAACAAATAAGATCA+TGG | + | chr1_1:65728921-65728940 | Msa0036890:exon | 15.0% |
| !!! | AATCTAGTTTTTAAAAATCA+TGG | + | chr1_1:65729736-65729755 | Msa0036890:intron | 15.0% |
| !! | AAATCACAACTTAATATTAT+AGG | - | chr1_1:65729848-65729867 | None:intergenic | 15.0% |
| !!! | CTTATGTCTAAAATATATTT+TGG | + | chr1_1:65729964-65729983 | Msa0036890:intron | 15.0% |
| !!! | TATGTCTAAAATATATTTTG+GGG | + | chr1_1:65729966-65729985 | Msa0036890:intron | 15.0% |
| !! | AACTTATTTATAAAACAAGT+GGG | - | chr1_1:65730301-65730320 | None:intergenic | 15.0% |
| !! | TAACTTATTTATAAAACAAG+TGG | - | chr1_1:65730302-65730321 | None:intergenic | 15.0% |
| !! | TTTATTTATTCCATAAACTT+AGG | - | chr1_1:65731386-65731405 | None:intergenic | 15.0% |
| !! | AGTTTATGGAATAAATAAAA+TGG | + | chr1_1:65731387-65731406 | Msa0036890:intron | 15.0% |
| !! | GTTTATGGAATAAATAAAAT+GGG | + | chr1_1:65731388-65731407 | Msa0036890:intron | 15.0% |
| !! | AATATTGAAAAAAAAAACGA+GGG | - | chr1_1:65731537-65731556 | None:intergenic | 15.0% |
| !! | AAATATTGAAAAAAAAAACG+AGG | - | chr1_1:65731538-65731557 | None:intergenic | 15.0% |
| !! | TAACAGTAATAACTAATAAT+TGG | - | chr1_1:65731742-65731761 | None:intergenic | 15.0% |
| !! | AGAAAAATGTATAAATAAAG+GGG | + | chr1_1:65731822-65731841 | Msa0036890:intron | 15.0% |
| !! | AAATAAACATTACATGAAAA+AGG | - | chr1_1:65734960-65734979 | None:intergenic | 15.0% |
| !!! | ATATTTTGATCATAGGAAAT+GGG | - | chr1_1:65728684-65728703 | None:intergenic | 20.0% |
| !!! | AATATTTTGATCATAGGAAA+TGG | - | chr1_1:65728685-65728704 | None:intergenic | 20.0% |
| !! | ATAAGATCACTTTATAAAGT+TGG | - | chr1_1:65729490-65729509 | None:intergenic | 20.0% |
| !! | TGTAAAAAACATTTACCTTA+TGG | + | chr1_1:65729533-65729552 | Msa0036890:intron | 20.0% |
| !! | TTAATTGTTATGTAACCATA+AGG | - | chr1_1:65729551-65729570 | None:intergenic | 20.0% |
| !! | TATCTTCTTGCTAAAATTAT+TGG | - | chr1_1:65729685-65729704 | None:intergenic | 20.0% |
| !!! | TTGTAATTTTGACAAATCTA+TGG | + | chr1_1:65729766-65729785 | Msa0036890:intron | 20.0% |
| !!! | AATTTTATCAAATGCATGTA+TGG | - | chr1_1:65729799-65729818 | None:intergenic | 20.0% |
| !!! | GTTTTTAGTTGGTTTATTAA+TGG | + | chr1_1:65730057-65730076 | Msa0036890:intron | 20.0% |
| !!! | ATTTATATTTTCCCTTACTT+TGG | + | chr1_1:65730096-65730115 | Msa0036890:intron | 20.0% |
| !!! | TTTATATTTTCCCTTACTTT+GGG | + | chr1_1:65730097-65730116 | Msa0036890:intron | 20.0% |
| !! | TGTTCATAAAACGTAAAAAA+TGG | + | chr1_1:65730246-65730265 | Msa0036890:intron | 20.0% |
| !! | ATCATTAGGAAAAGAAATAT+AGG | + | chr1_1:65730415-65730434 | Msa0036890:intron | 20.0% |
| !! | AAATTATAGTTATAGTGCAA+AGG | + | chr1_1:65730918-65730937 | Msa0036890:intron | 20.0% |
| !! | AATGTTATCCTTATATTGTT+AGG | + | chr1_1:65731173-65731192 | Msa0036890:intron | 20.0% |
| !! | TACATTTACCTAACAATATA+AGG | - | chr1_1:65731184-65731203 | None:intergenic | 20.0% |
| !! | TCGCAATGTAATAAATTATA+TGG | - | chr1_1:65731244-65731263 | None:intergenic | 20.0% |
| !!! | TAAACTTAGGTATTGAATAA+TGG | - | chr1_1:65731373-65731392 | None:intergenic | 20.0% |
| !! | TTATTCAATACCTAAGTTTA+TGG | + | chr1_1:65731373-65731392 | Msa0036890:intron | 20.0% |
| !! | ATAAATAAAATGGGAAAAGA+TGG | + | chr1_1:65731397-65731416 | Msa0036890:intron | 20.0% |
| !! | TAAATAAAATGGGAAAAGAT+GGG | + | chr1_1:65731398-65731417 | Msa0036890:intron | 20.0% |
| !! | AAAAAAAAAAATCACATAGC+CGG | + | chr1_1:65731609-65731628 | Msa0036890:intron | 20.0% |
| !!! | TTTTCACTATAGTTATTAGA+CGG | - | chr1_1:65731648-65731667 | None:intergenic | 20.0% |
| !!! | AGTAGTATTGAAAATTGAAA+TGG | + | chr1_1:65731877-65731896 | Msa0036890:intron | 20.0% |
| !! | AGTATATGAATGACTTATAA+AGG | + | chr1_1:65731959-65731978 | Msa0036890:intron | 20.0% |
| !! | TAAAAAAACCATTCATTCAA+CGG | + | chr1_1:65731982-65732001 | Msa0036890:intron | 20.0% |
| !!! | TTTTAGTTACAAATTCATGT+CGG | + | chr1_1:65732098-65732117 | Msa0036890:intron | 20.0% |
| !! | AAATGTGGTCAAAATATATT+AGG | - | chr1_1:65732194-65732213 | None:intergenic | 20.0% |
| !! | TGTATATTAGTTGAAAAATG+TGG | - | chr1_1:65732209-65732228 | None:intergenic | 20.0% |
| !! | TAAAGATAAAACATATGCAT+TGG | + | chr1_1:65732330-65732349 | Msa0036890:intron | 20.0% |
| !! | AATGTAGATAGACTAATTAA+TGG | - | chr1_1:65732429-65732448 | None:intergenic | 20.0% |
| !!! | AGTCTATCTACATTTTATTA+TGG | + | chr1_1:65732435-65732454 | Msa0036890:intron | 20.0% |
| !! | TAAGGAGTTGTTAAATTAAA+TGG | + | chr1_1:65732657-65732676 | Msa0036890:intron | 20.0% |
| !! | AAAATGATTAAGAGTCAATT+AGG | - | chr1_1:65732893-65732912 | None:intergenic | 20.0% |
| !! | TAATATTAATTCATCAGTTG+AGG | + | chr1_1:65732915-65732934 | Msa0036890:intron | 20.0% |
| !!! | ATTATGGAACATATTTTAGA+TGG | + | chr1_1:65733708-65733727 | Msa0036890:CDS | 20.0% |
| !!! | TGTTTATTTTATGAAGATGT+TGG | + | chr1_1:65734971-65734990 | Msa0036890:three_prime_UTR | 20.0% |
| !!! | GTTTATTTTATGAAGATGTT+GGG | + | chr1_1:65734972-65734991 | Msa0036890:three_prime_UTR | 20.0% |
| !! | TTATGATGATGAAGAAATTG+AGG | - | chr1_1:65728905-65728924 | None:intergenic | 25.0% |
| !!! | TGGTTGATAGTATGAATAAA+GGG | + | chr1_1:65729247-65729266 | Msa0036890:CDS | 25.0% |
| ! | AAATGAAAACTACAACATCT+TGG | + | chr1_1:65729644-65729663 | Msa0036890:intron | 25.0% |
| !! | AAACTAGATTTGAAAGCTTT+TGG | - | chr1_1:65729726-65729745 | None:intergenic | 25.0% |
| ! | TATCGTATCTTAACATATGT+TGG | + | chr1_1:65730007-65730026 | Msa0036890:intron | 25.0% |
| !!! | TATTTTAATATCCTGTGTCT+CGG | + | chr1_1:65730035-65730054 | Msa0036890:intron | 25.0% |
| !! | TAGTTGGTTTATTAATGGAT+TGG | + | chr1_1:65730062-65730081 | Msa0036890:intron | 25.0% |
| !! | TTATATTTTCCCTTACTTTG+GGG | + | chr1_1:65730098-65730117 | Msa0036890:intron | 25.0% |
| !! | ACAAACAAAAGCACAAAAAA+GGG | - | chr1_1:65730217-65730236 | None:intergenic | 25.0% |
| !! | AACAAACAAAAGCACAAAAA+AGG | - | chr1_1:65730218-65730237 | None:intergenic | 25.0% |
| !!! | TATTTCTTTTGGGTTACAAA+TGG | - | chr1_1:65730368-65730387 | None:intergenic | 25.0% |
| ! | AACCCAAAAGAAATAAATGA+CGG | + | chr1_1:65730373-65730392 | Msa0036890:intron | 25.0% |
| !! | TTTTAGCACAAATCATCATT+AGG | + | chr1_1:65730401-65730420 | Msa0036890:intron | 25.0% |
| ! | AATTTATTACATTGCGAAAG+AGG | + | chr1_1:65731247-65731266 | Msa0036890:intron | 25.0% |
| ! | ATTTATTACATTGCGAAAGA+GGG | + | chr1_1:65731248-65731267 | Msa0036890:intron | 25.0% |
| !!! | TTTGTTTTTGCTTATGTGTT+TGG | + | chr1_1:65731694-65731713 | Msa0036890:intron | 25.0% |
| !!! | TTATGTGTTTGGTTTTAAGT+TGG | + | chr1_1:65731705-65731724 | Msa0036890:intron | 25.0% |
| !! | AATATCATATAAGGTGTCAT+TGG | + | chr1_1:65732238-65732257 | Msa0036890:intron | 25.0% |
| ! | ATTATGGTTATTATTCCTTC+AGG | + | chr1_1:65732451-65732470 | Msa0036890:intron | 25.0% |
| ! | TATGCAATTGAGTTTAGATA+TGG | - | chr1_1:65732500-65732519 | None:intergenic | 25.0% |
| ! | TGCCATTAATTTAATGTACT+TGG | + | chr1_1:65732737-65732756 | Msa0036890:intron | 25.0% |
| ! | GTCCAAGTACATTAAATTAA+TGG | - | chr1_1:65732742-65732761 | None:intergenic | 25.0% |
| !! | ACAACAATTTTGTTCCATAA+AGG | - | chr1_1:65732778-65732797 | None:intergenic | 25.0% |
| !!! | ACAAAATTGTTGTTTTGACT+CGG | + | chr1_1:65732785-65732804 | Msa0036890:intron | 25.0% |
| ! | AAATTTACTAGTTGTTCTCT+CGG | + | chr1_1:65733578-65733597 | Msa0036890:CDS | 25.0% |
| ! | GTTTCAACTTATGAATCAAA+TGG | - | chr1_1:65733659-65733678 | None:intergenic | 25.0% |
| ! | AGATGGAAGTTATTATCTTA+AGG | + | chr1_1:65733725-65733744 | Msa0036890:CDS | 25.0% |
| ! | TATTGATGTTTCAAGGAATA+TGG | + | chr1_1:65733908-65733927 | Msa0036890:CDS | 25.0% |
| ! | AAGTTCATAAGAGAAACTTT+AGG | + | chr1_1:65734734-65734753 | Msa0036890:CDS | 25.0% |
| ! | AGTTCATAAGAGAAACTTTA+GGG | + | chr1_1:65734735-65734754 | Msa0036890:CDS | 25.0% |
| AAAAACGGAAAGGATTAATG+TGG | - | chr1_1:65728730-65728749 | None:intergenic | 30.0% | |
| GTTAGGAATTGTGACAAAAA+CGG | - | chr1_1:65728745-65728764 | None:intergenic | 30.0% | |
| TATGTTATATTGTATAGGGG+AGG | - | chr1_1:65728794-65728813 | None:intergenic | 30.0% | |
| ! | AAGATCATGGAGTTTTCAAA+TGG | + | chr1_1:65728934-65728953 | Msa0036890:exon | 30.0% |
| TCAAATGGAGATAATAGCAA+TGG | + | chr1_1:65728949-65728968 | Msa0036890:CDS | 30.0% | |
| GATAATAGCAATGGTTGTAA+CGG | + | chr1_1:65728958-65728977 | Msa0036890:CDS | 30.0% | |
| !! | GTGGTTGATAGTATGAATAA+AGG | + | chr1_1:65729246-65729265 | Msa0036890:CDS | 30.0% |
| ACCCAAAAGAAATAAATGAC+GGG | + | chr1_1:65730374-65730393 | Msa0036890:intron | 30.0% | |
| !! | ACCCGTCATTTATTTCTTTT+GGG | - | chr1_1:65730378-65730397 | None:intergenic | 30.0% |
| !! | AACCCGTCATTTATTTCTTT+TGG | - | chr1_1:65730379-65730398 | None:intergenic | 30.0% |
| TGTTAAGGGAAAAATGTGAT+CGG | + | chr1_1:65730522-65730541 | Msa0036890:intron | 30.0% | |
| ! | ATACAAAGGACACTGATTAA+GGG | - | chr1_1:65731010-65731029 | None:intergenic | 30.0% |
| ! | TATACAAAGGACACTGATTA+AGG | - | chr1_1:65731011-65731030 | None:intergenic | 30.0% |
| TAGTCTATAGACCCTTAATT+AGG | + | chr1_1:65731029-65731048 | Msa0036890:intron | 30.0% | |
| TTAACCAGTGTCCTAATTAA+GGG | - | chr1_1:65731043-65731062 | None:intergenic | 30.0% | |
| ATTGATTGATTGATACCACT+GGG | - | chr1_1:65731137-65731156 | None:intergenic | 30.0% | |
| ! | TATTGATTGATTGATACCAC+TGG | - | chr1_1:65731138-65731157 | None:intergenic | 30.0% |
| TTTATTACATTGCGAAAGAG+GGG | + | chr1_1:65731249-65731268 | Msa0036890:intron | 30.0% | |
| ATAAGTGTGAAATAAGCCAA+TGG | - | chr1_1:65731800-65731819 | None:intergenic | 30.0% | |
| AATAGTGCACATTGTCAAAT+AGG | - | chr1_1:65732169-65732188 | None:intergenic | 30.0% | |
| !! | TCAACTGTGTCACTTAATAT+GGG | + | chr1_1:65732367-65732386 | Msa0036890:intron | 30.0% |
| CTCAATTGCATAACTTTACA+TGG | + | chr1_1:65732508-65732527 | Msa0036890:intron | 30.0% | |
| !! | ATCCTTGTTGTTTATGTTTG+TGG | + | chr1_1:65732827-65732846 | Msa0036890:intron | 30.0% |
| TGAATAAATTGTGAACAGCT+AGG | - | chr1_1:65732869-65732888 | None:intergenic | 30.0% | |
| CTTAACACAATTGTTTGACT+TGG | + | chr1_1:65732952-65732971 | Msa0036890:intron | 30.0% | |
| CTTGGCATGAATTAATCATT+TGG | + | chr1_1:65732970-65732989 | Msa0036890:intron | 30.0% | |
| ! | TTTCTGAATGCTGGAATTTT+CGG | + | chr1_1:65733153-65733172 | Msa0036890:CDS | 30.0% |
| ! | AGGAATCAGATTTGAAATCA+TGG | + | chr1_1:65733266-65733285 | Msa0036890:CDS | 30.0% |
| ! | AATTTGGCCTTCCAATTAAA+AGG | - | chr1_1:65733395-65733414 | None:intergenic | 30.0% |
| AGGCCAAATTCAAAATCTAT+TGG | + | chr1_1:65733405-65733424 | Msa0036890:CDS | 30.0% | |
| ! | GGTCCAATAGATTTTGAATT+TGG | - | chr1_1:65733411-65733430 | None:intergenic | 30.0% |
| TCAAAATCTATTGGACCTAA+TGG | + | chr1_1:65733414-65733433 | Msa0036890:CDS | 30.0% | |
| !! | AATAAGTGGATTGTCATTCA+CGG | - | chr1_1:65733892-65733911 | None:intergenic | 30.0% |
| ATCCACTTATTGATGTTTCA+AGG | + | chr1_1:65733901-65733920 | Msa0036890:CDS | 30.0% | |
| TTCCTTGAAACATCAATAAG+TGG | - | chr1_1:65733906-65733925 | None:intergenic | 30.0% | |
| AGCAAACATAAGTTTACCAA+TGG | - | chr1_1:65734006-65734025 | None:intergenic | 30.0% | |
| !! | GTATTGAAGTTCTGAACAAT+AGG | - | chr1_1:65734144-65734163 | None:intergenic | 30.0% |
| AACCAAGATGTTAACTCTTT+AGG | + | chr1_1:65734209-65734228 | Msa0036890:CDS | 30.0% | |
| GATTTACTCAATGTTGTTGA+AGG | + | chr1_1:65734443-65734462 | Msa0036890:CDS | 30.0% | |
| TGATCATATTAGGAACTGAA+GGG | - | chr1_1:65734688-65734707 | None:intergenic | 30.0% | |
| TTGATCATATTAGGAACTGA+AGG | - | chr1_1:65734689-65734708 | None:intergenic | 30.0% | |
| TTCAGTTCCTAATATGATCA+AGG | + | chr1_1:65734688-65734707 | Msa0036890:CDS | 30.0% | |
| CTACATTCCTTGATCATATT+AGG | - | chr1_1:65734698-65734717 | None:intergenic | 30.0% | |
| TCTCTTATGAACTTGTACAA+TGG | - | chr1_1:65734728-65734747 | None:intergenic | 30.0% | |
| TGATCATAGGAAATGGGAAA+TGG | - | chr1_1:65728678-65728697 | None:intergenic | 35.0% | |
| GAATTGTGACAAAAACGGAA+AGG | - | chr1_1:65728740-65728759 | None:intergenic | 35.0% | |
| ATTTGTGGGATATAGGTGAA+TGG | - | chr1_1:65728770-65728789 | None:intergenic | 35.0% | |
| GAAGAAATTGAGGCTGATTA+AGG | - | chr1_1:65728895-65728914 | None:intergenic | 35.0% | |
| TCTTCCATGAATCTTTGCAA+TGG | + | chr1_1:65728982-65729001 | Msa0036890:CDS | 35.0% | |
| ACAACAATGACCCTTTGAAT+TGG | + | chr1_1:65729022-65729041 | Msa0036890:CDS | 35.0% | |
| CAACAATGACCCTTTGAATT+GGG | + | chr1_1:65729023-65729042 | Msa0036890:CDS | 35.0% | |
| AACAATGACCCTTTGAATTG+GGG | + | chr1_1:65729024-65729043 | Msa0036890:CDS | 35.0% | |
| ! | GTTAAACCTTTTCCACCTAA+GGG | - | chr1_1:65729129-65729148 | None:intergenic | 35.0% |
| ! | TGTTAAACCTTTTCCACCTA+AGG | - | chr1_1:65729130-65729149 | None:intergenic | 35.0% |
| AGGTTTAACAATAGCACAAG+TGG | + | chr1_1:65729140-65729159 | Msa0036890:CDS | 35.0% | |
| !! | CCAATCACTACTAGCTTTAA+CGG | - | chr1_1:65729226-65729245 | None:intergenic | 35.0% |
| CGTTAAAGCTAGTAGTGATT+GGG | + | chr1_1:65729224-65729243 | Msa0036890:CDS | 35.0% | |
| AATAAAGGGACTGATAGCTA+TGG | + | chr1_1:65729261-65729280 | Msa0036890:CDS | 35.0% | |
| !! | TTGTTTTGTTCTTCTGTGTG+AGG | - | chr1_1:65729310-65729329 | None:intergenic | 35.0% |
| TCACACAGAAGAACAAAACA+AGG | + | chr1_1:65729309-65729328 | Msa0036890:CDS | 35.0% | |
| TATGTGAAACTTGTGATCGA+GGG | + | chr1_1:65730270-65730289 | Msa0036890:intron | 35.0% | |
| GTTAAGGGAAAAATGTGATC+GGG | + | chr1_1:65730523-65730542 | Msa0036890:intron | 35.0% | |
| AGGGTCTATAGACTATACAA+AGG | - | chr1_1:65731024-65731043 | None:intergenic | 35.0% | |
| GTTAACCAGTGTCCTAATTA+AGG | - | chr1_1:65731044-65731063 | None:intergenic | 35.0% | |
| ! | TATTGTTTGAAATCACCCAG+TGG | + | chr1_1:65731119-65731138 | Msa0036890:intron | 35.0% |
| CGATTTCACTCGCAAATAAA+TGG | - | chr1_1:65731301-65731320 | None:intergenic | 35.0% | |
| TTTATTTGCGAGTGAAATCG+TGG | + | chr1_1:65731301-65731320 | Msa0036890:intron | 35.0% | |
| TGCATGAATTCAGCACTTTA+TGG | - | chr1_1:65731432-65731451 | None:intergenic | 35.0% | |
| CACTATAGTTATTAGACGGT+TGG | - | chr1_1:65731644-65731663 | None:intergenic | 35.0% | |
| AATGGCTCAATTAATTGGGA+AGG | - | chr1_1:65731782-65731801 | None:intergenic | 35.0% | |
| TTCCCAATTAATTGAGCCAT+TGG | + | chr1_1:65731781-65731800 | Msa0036890:intron | 35.0% | |
| AGCCAATGGCTCAATTAATT+GGG | - | chr1_1:65731786-65731805 | None:intergenic | 35.0% | |
| AAGCCAATGGCTCAATTAAT+TGG | - | chr1_1:65731787-65731806 | None:intergenic | 35.0% | |
| ATGACTCAATTAATCCGAGA+CGG | + | chr1_1:65731932-65731951 | Msa0036890:intron | 35.0% | |
| TAGTTACAAATTCATGTCGG+TGG | + | chr1_1:65732101-65732120 | Msa0036890:intron | 35.0% | |
| AGTTACAAATTCATGTCGGT+GGG | + | chr1_1:65732102-65732121 | Msa0036890:intron | 35.0% | |
| GTCAAATAGGTCATCTATTG+CGG | - | chr1_1:65732156-65732175 | None:intergenic | 35.0% | |
| !! | GTCAACTGTGTCACTTAATA+TGG | + | chr1_1:65732366-65732385 | Msa0036890:intron | 35.0% |
| ! | ACGGAGGGAGTATATTATAA+TGG | + | chr1_1:65732390-65732409 | Msa0036890:intron | 35.0% |
| TTTCATAAGGCAGAACATCA+AGG | + | chr1_1:65732626-65732645 | Msa0036890:intron | 35.0% | |
| TTCATAAGGCAGAACATCAA+GGG | + | chr1_1:65732627-65732646 | Msa0036890:intron | 35.0% | |
| AACATCAAGGGATGTTCATA+AGG | + | chr1_1:65732639-65732658 | Msa0036890:intron | 35.0% | |
| ! | GAATTGTACACTCATTTTGC+AGG | + | chr1_1:65732688-65732707 | Msa0036890:intron | 35.0% |
| ! | ATTTTGCAGGCTTGATGTTT+TGG | + | chr1_1:65732701-65732720 | Msa0036890:intron | 35.0% |
| CAGTTACAGTTGTACCTTTA+TGG | + | chr1_1:65732761-65732780 | Msa0036890:intron | 35.0% | |
| AGCCACAAACATAAACAACA+AGG | - | chr1_1:65732832-65732851 | None:intergenic | 35.0% | |
| ATTCAGAATGAAGACGTGTT+TGG | - | chr1_1:65733075-65733094 | None:intergenic | 35.0% | |
| ACGTCTTCATTCTGAATTGT+TGG | + | chr1_1:65733078-65733097 | Msa0036890:intron | 35.0% | |
| AGAATCAACACATTGCTTCA+AGG | + | chr1_1:65733237-65733256 | Msa0036890:CDS | 35.0% | |
| ACATTGCTTCAAGGATATTC+AGG | + | chr1_1:65733246-65733265 | Msa0036890:CDS | 35.0% | |
| !! | GAAGACATGGTGTTATGTTA+TGG | - | chr1_1:65733314-65733333 | None:intergenic | 35.0% |
| ATTCCTTTAGCATATGTTGC+TGG | + | chr1_1:65733369-65733388 | Msa0036890:CDS | 35.0% | |
| !!! | TATGTTGCTGGCCTTTTAAT+TGG | + | chr1_1:65733381-65733400 | Msa0036890:CDS | 35.0% |
| !! | ACAAGTTCTGAATGCTAAAG+AGG | + | chr1_1:65733437-65733456 | Msa0036890:CDS | 35.0% |
| !! | TTTGAGTTGCAACCTAAAGA+AGG | + | chr1_1:65733492-65733511 | Msa0036890:CDS | 35.0% |
| ACTAGTGCTAAACCTTCTTT+AGG | - | chr1_1:65733507-65733526 | None:intergenic | 35.0% | |
| ATCAAATGGTCAGTGAATTG+AGG | - | chr1_1:65733645-65733664 | None:intergenic | 35.0% | |
| ! | CATAAGTTGAAACTTCATCC+TGG | + | chr1_1:65733666-65733685 | Msa0036890:CDS | 35.0% |
| ! | ATCGCGTATCTATCTTGTTT+AGG | - | chr1_1:65733789-65733808 | None:intergenic | 35.0% |
| TTATCCATCGATACACCAAT+CGG | - | chr1_1:65733963-65733982 | None:intergenic | 35.0% | |
| AAGTTTACCAATGGAAGCAA+TGG | - | chr1_1:65733997-65734016 | None:intergenic | 35.0% | |
| GTGAATGACATCTATAGCAA+CGG | + | chr1_1:65734041-65734060 | Msa0036890:CDS | 35.0% | |
| AGCCTAAAGAGTTAACATCT+TGG | - | chr1_1:65734214-65734233 | None:intergenic | 35.0% | |
| ! | TATTGATCTAAGGCACATTG+AGG | + | chr1_1:65734316-65734335 | Msa0036890:CDS | 35.0% |
| GTTGATCATGCATTGCAAAA+TGG | + | chr1_1:65734542-65734561 | Msa0036890:CDS | 35.0% | |
| TGCATTGCAAAATGGTGATA+AGG | + | chr1_1:65734550-65734569 | Msa0036890:CDS | 35.0% | |
| ATTGCAAAATGGTGATAAGG+AGG | + | chr1_1:65734553-65734572 | Msa0036890:CDS | 35.0% | |
| ! | ACCTCCATTTTCCAAAAGAT+TGG | + | chr1_1:65734587-65734606 | Msa0036890:CDS | 35.0% |
| !! | TCCAATCTTTTGGAAAATGG+AGG | - | chr1_1:65734591-65734610 | None:intergenic | 35.0% |
| !! | AGCTCCAATCTTTTGGAAAA+TGG | - | chr1_1:65734594-65734613 | None:intergenic | 35.0% |
| TAAAGAGGTGGAAAATGCTA+GGG | + | chr1_1:65734643-65734662 | Msa0036890:CDS | 35.0% | |
| AAGGTTTATTGATCCCATGT+TGG | + | chr1_1:65734835-65734854 | Msa0036890:CDS | 35.0% | |
| TCCTTTAGACAATCCAACAT+GGG | - | chr1_1:65734851-65734870 | None:intergenic | 35.0% | |
| GATATAGGTGAATGGCAGTT+AGG | - | chr1_1:65728762-65728781 | None:intergenic | 40.0% | |
| TGTATAGGGGAGGAATTTGT+GGG | - | chr1_1:65728784-65728803 | None:intergenic | 40.0% | |
| TTGTATAGGGGAGGAATTTG+TGG | - | chr1_1:65728785-65728804 | None:intergenic | 40.0% | |
| TCCATGAATCTTTGCAATGG+TGG | + | chr1_1:65728985-65729004 | Msa0036890:CDS | 40.0% | |
| TCCACCATTGCAAAGATTCA+TGG | - | chr1_1:65728989-65729008 | None:intergenic | 40.0% | |
| ! | CAAAGGGTCATTGTTGTTAC+TGG | - | chr1_1:65729019-65729038 | None:intergenic | 40.0% |
| TATGGCTGCAGATTCTATGA+AGG | + | chr1_1:65729047-65729066 | Msa0036890:CDS | 40.0% | |
| ATGGCTGCAGATTCTATGAA+GGG | + | chr1_1:65729048-65729067 | Msa0036890:CDS | 40.0% | |
| !! | ATCACTACTAGCTTTAACGG+CGG | - | chr1_1:65729223-65729242 | None:intergenic | 40.0% |
| CCGTTAAAGCTAGTAGTGAT+TGG | + | chr1_1:65729223-65729242 | Msa0036890:CDS | 40.0% | |
| TAAAGCTAGTAGTGATTGGG+TGG | + | chr1_1:65729227-65729246 | Msa0036890:CDS | 40.0% | |
| CACAGAAGAACAAAACAAGG+TGG | + | chr1_1:65729312-65729331 | Msa0036890:CDS | 40.0% | |
| CCTGATGAGTTCACTTTGAA+GGG | - | chr1_1:65729340-65729359 | None:intergenic | 40.0% | |
| ACCTGATGAGTTCACTTTGA+AGG | - | chr1_1:65729341-65729360 | None:intergenic | 40.0% | |
| !!! | ATTTTCCCTTACTTTGGGGT+AGG | + | chr1_1:65730102-65730121 | Msa0036890:intron | 40.0% |
| AACTTCATCAAGCAGATCAC+TGG | - | chr1_1:65730135-65730154 | None:intergenic | 40.0% | |
| GTGATCTGCTTGATGAAGTT+AGG | + | chr1_1:65730135-65730154 | Msa0036890:intron | 40.0% | |
| GCTTGATGAAGTTAGGTAGA+AGG | + | chr1_1:65730142-65730161 | Msa0036890:intron | 40.0% | |
| CTATGTGAAACTTGTGATCG+AGG | + | chr1_1:65730269-65730288 | Msa0036890:intron | 40.0% | |
| TAGACCCTTAATTAGGACAC+TGG | + | chr1_1:65731036-65731055 | Msa0036890:intron | 40.0% | |
| GCTCAATTAATTGGGAAGGA+GGG | - | chr1_1:65731778-65731797 | None:intergenic | 40.0% | |
| CACTTCTACCGTTGAATGAA+TGG | - | chr1_1:65731993-65732012 | None:intergenic | 40.0% | |
| !! | TGGGAGTATTGTGCAATTTC+TGG | - | chr1_1:65732128-65732147 | None:intergenic | 40.0% |
| ATAGGTCATCTATTGCGGAA+CGG | - | chr1_1:65732151-65732170 | None:intergenic | 40.0% | |
| !! | CTGTGTCACTTAATATGGGA+CGG | + | chr1_1:65732371-65732390 | Msa0036890:intron | 40.0% |
| !! | TTTGACTCGGCATGATGATT+TGG | + | chr1_1:65732798-65732817 | Msa0036890:intron | 40.0% |
| GTATGACTCATTCAACGTGT+CGG | + | chr1_1:65733046-65733065 | Msa0036890:intron | 40.0% | |
| TGCAACAGATTTCTGAATGC+TGG | + | chr1_1:65733144-65733163 | Msa0036890:intron | 40.0% | |
| ! | AATGCTGGAATTTTCGGCAA+TGG | + | chr1_1:65733159-65733178 | Msa0036890:CDS | 40.0% |
| ACACCATGTCTTCCATTAAG+AGG | + | chr1_1:65733321-65733340 | Msa0036890:CDS | 40.0% | |
| GTACCTCTTAATGGAAGACA+TGG | - | chr1_1:65733327-65733346 | None:intergenic | 40.0% | |
| GCAGTGATTGTACCTCTTAA+TGG | - | chr1_1:65733336-65733355 | None:intergenic | 40.0% | |
| !!! | TTGCTGGCCTTTTAATTGGA+AGG | + | chr1_1:65733385-65733404 | Msa0036890:CDS | 40.0% |
| GCATTCAGAACTTGTCCATT+AGG | - | chr1_1:65733432-65733451 | None:intergenic | 40.0% | |
| !! | AAAGAGGCATTTCAACTAGC+TGG | + | chr1_1:65733453-65733472 | Msa0036890:CDS | 40.0% |
| CAACTAGCTGGAATTGAAAC+TGG | + | chr1_1:65733465-65733484 | Msa0036890:CDS | 40.0% | |
| GAAGGTTTAGCACTAGTGAA+TGG | + | chr1_1:65733510-65733529 | Msa0036890:CDS | 40.0% | |
| ! | ACTTTTGTCTGCGATTTTCG+CGG | + | chr1_1:65733602-65733621 | Msa0036890:CDS | 40.0% |
| ! | ATTTTCGCGGAAGTTATGCT+AGG | + | chr1_1:65733615-65733634 | Msa0036890:CDS | 40.0% |
| ACTTCATCCTGGTCAAATTG+AGG | + | chr1_1:65733677-65733696 | Msa0036890:CDS | 40.0% | |
| AATTGAGGCTGCTGCTATTA+TGG | + | chr1_1:65733692-65733711 | Msa0036890:CDS | 40.0% | |
| ! | TCTTGTTTAGGCTTCTGAAG+TGG | - | chr1_1:65733777-65733796 | None:intergenic | 40.0% |
| TGTCGAATCACTTCAATCTG+CGG | - | chr1_1:65733837-65733856 | None:intergenic | 40.0% | |
| ACGCAACAAAGATGATTGAG+AGG | + | chr1_1:65733856-65733875 | Msa0036890:CDS | 40.0% | |
| CGCAACAAAGATGATTGAGA+GGG | + | chr1_1:65733857-65733876 | Msa0036890:CDS | 40.0% | |
| TCAAGGAATATGGCACTTCA+TGG | + | chr1_1:65733918-65733937 | Msa0036890:CDS | 40.0% | |
| CTTCATGGAGGAAATTTCCA+AGG | + | chr1_1:65733933-65733952 | Msa0036890:CDS | 40.0% | |
| AATTTCCAAGGTACACCGAT+TGG | + | chr1_1:65733945-65733964 | Msa0036890:CDS | 40.0% | |
| CGTAATCCAAACTTGGATTG+CGG | - | chr1_1:65734091-65734110 | None:intergenic | 40.0% | |
| CGCAATCCAAGTTTGGATTA+CGG | + | chr1_1:65734089-65734108 | Msa0036890:CDS | 40.0% | |
| TTGAAGCCGTAATCCAAACT+TGG | - | chr1_1:65734098-65734117 | None:intergenic | 40.0% | |
| AGTTTGGATTACGGCTTCAA+AGG | + | chr1_1:65734098-65734117 | Msa0036890:CDS | 40.0% | |
| CAAAGGAGCAGAAATTGCAA+TGG | + | chr1_1:65734115-65734134 | Msa0036890:CDS | 40.0% | |
| TTCAGCACTTTGAACATGAG+TGG | - | chr1_1:65734183-65734202 | None:intergenic | 40.0% | |
| TTGGCACAATGCTACTAAGA+AGG | - | chr1_1:65734294-65734313 | None:intergenic | 40.0% | |
| TGTGCCAAGCTATTGATCTA+AGG | + | chr1_1:65734306-65734325 | Msa0036890:CDS | 40.0% | |
| TGTGCCTTAGATCAATAGCT+TGG | - | chr1_1:65734313-65734332 | None:intergenic | 40.0% | |
| ACCAACTGTGAGAATTCTCT+TGG | - | chr1_1:65734384-65734403 | None:intergenic | 40.0% | |
| !! | ATTCTCACAGTTGGTGTCAA+TGG | + | chr1_1:65734389-65734408 | Msa0036890:CDS | 40.0% |
| !! | TCCATCAAGGTTTTGTGAGA+AGG | + | chr1_1:65734421-65734440 | Msa0036890:CDS | 40.0% |
| TCCTTCTCACAAAACCTTGA+TGG | - | chr1_1:65734425-65734444 | None:intergenic | 40.0% | |
| ! | CCTCAAAAGCTCCAATCTTT+TGG | - | chr1_1:65734601-65734620 | None:intergenic | 40.0% |
| ! | CCAAAAGATTGGAGCTTTTG+AGG | + | chr1_1:65734598-65734617 | Msa0036890:CDS | 40.0% |
| ! | TAAGACCCTTTTGCCTAAAG+AGG | + | chr1_1:65734628-65734647 | Msa0036890:CDS | 40.0% |
| TTCCACCTCTTTAGGCAAAA+GGG | - | chr1_1:65734636-65734655 | None:intergenic | 40.0% | |
| TTTCCACCTCTTTAGGCAAA+AGG | - | chr1_1:65734637-65734656 | None:intergenic | 40.0% | |
| ! | CTAGCATTTTCCACCTCTTT+AGG | - | chr1_1:65734644-65734663 | None:intergenic | 40.0% |
| CTAAAGAGGTGGAAAATGCT+AGG | + | chr1_1:65734642-65734661 | Msa0036890:CDS | 40.0% | |
| !! | GCTAGGGTTCAAGTTGAAAA+TGG | + | chr1_1:65734659-65734678 | Msa0036890:CDS | 40.0% |
| TGCTGACAGGTGAGAAAATT+AGG | + | chr1_1:65734765-65734784 | Msa0036890:CDS | 40.0% | |
| TCCCATGTTGGATTGTCTAA+AGG | + | chr1_1:65734847-65734866 | Msa0036890:CDS | 40.0% | |
| CTCCTTTAGACAATCCAACA+TGG | - | chr1_1:65734852-65734871 | None:intergenic | 40.0% | |
| TGTTGGATTGTCTAAAGGAG+TGG | + | chr1_1:65734852-65734871 | Msa0036890:CDS | 40.0% | |
| GATTGTCTAAAGGAGTGGAA+TGG | + | chr1_1:65734857-65734876 | Msa0036890:CDS | 40.0% | |
| CAATCCTAGCAAATAGGTAG+AGG | - | chr1_1:65734887-65734906 | None:intergenic | 40.0% | |
| GTAGCACAATCCTAGCAAAT+AGG | - | chr1_1:65734893-65734912 | None:intergenic | 40.0% | |
| GGGAGGAATTTGTGGGATAT+AGG | - | chr1_1:65728777-65728796 | None:intergenic | 45.0% | |
| TGACCCTTTGAATTGGGGTA+TGG | + | chr1_1:65729029-65729048 | Msa0036890:CDS | 45.0% | |
| CAGCCATACCCCAATTCAAA+GGG | - | chr1_1:65729035-65729054 | None:intergenic | 45.0% | |
| AGCGTATGGTAGAGGAATAC+CGG | + | chr1_1:65729091-65729110 | Msa0036890:CDS | 45.0% | |
| AACAATAGCACAAGTGGCTG+CGG | + | chr1_1:65729146-65729165 | Msa0036890:CDS | 45.0% | |
| TGCAACTCATAGTACCATCG+TGG | + | chr1_1:65729170-65729189 | Msa0036890:CDS | 45.0% | |
| AACTCATAGTACCATCGTGG+CGG | + | chr1_1:65729173-65729192 | Msa0036890:CDS | 45.0% | |
| ATAGCTATGGAGTGACCACT+GGG | + | chr1_1:65729274-65729293 | Msa0036890:CDS | 45.0% | |
| CCCTTCAAAGTGAACTCATC+AGG | + | chr1_1:65729337-65729356 | Msa0036890:CDS | 45.0% | |
| CCAACTAAAAACCGAGACAC+AGG | - | chr1_1:65730049-65730068 | None:intergenic | 45.0% | |
| !!! | CCTGTGTCTCGGTTTTTAGT+TGG | + | chr1_1:65730046-65730065 | Msa0036890:intron | 45.0% |
| CATGCAATTCCATAGCTGCA+GGG | - | chr1_1:65731341-65731360 | None:intergenic | 45.0% | |
| ACATGCAATTCCATAGCTGC+AGG | - | chr1_1:65731342-65731361 | None:intergenic | 45.0% | |
| AAAATCACATAGCCGGTGTG+TGG | + | chr1_1:65731616-65731635 | Msa0036890:intron | 45.0% | |
| AAATCACATAGCCGGTGTGT+GGG | + | chr1_1:65731617-65731636 | Msa0036890:intron | 45.0% | |
| GGCTCAATTAATTGGGAAGG+AGG | - | chr1_1:65731779-65731798 | None:intergenic | 45.0% | |
| ACTCAATTAATCCGAGACGG+AGG | + | chr1_1:65731935-65731954 | Msa0036890:intron | 45.0% | |
| CTCAATTAATCCGAGACGGA+GGG | + | chr1_1:65731936-65731955 | Msa0036890:intron | 45.0% | |
| TTCATATACTCCCTCCGTCT+CGG | - | chr1_1:65731949-65731968 | None:intergenic | 45.0% | |
| !! | AACGGTAGAAGTGTCAGTGT+CGG | + | chr1_1:65732000-65732019 | Msa0036890:intron | 45.0% |
| ! | TGTCACTTAATATGGGACGG+AGG | + | chr1_1:65732374-65732393 | Msa0036890:intron | 45.0% |
| GTCACTTAATATGGGACGGA+GGG | + | chr1_1:65732375-65732394 | Msa0036890:intron | 45.0% | |
| TTCCTTCAGGTCCATCTACA+TGG | + | chr1_1:65732464-65732483 | Msa0036890:intron | 45.0% | |
| TACCATGTAGATGGACCTGA+AGG | - | chr1_1:65732469-65732488 | None:intergenic | 45.0% | |
| GTGCTATGCTACCATGTAGA+TGG | - | chr1_1:65732478-65732497 | None:intergenic | 45.0% | |
| ! | AGAGGTACAATCACTGCATC+AGG | + | chr1_1:65733339-65733358 | Msa0036890:CDS | 45.0% |
| AGGCCAGCAACATATGCTAA+AGG | - | chr1_1:65733375-65733394 | None:intergenic | 45.0% | |
| CTAGTGAATGGTACTGCAGT+TGG | + | chr1_1:65733522-65733541 | Msa0036890:CDS | 45.0% | |
| AATGGTACTGCAGTTGGATC+AGG | + | chr1_1:65733528-65733547 | Msa0036890:CDS | 45.0% | |
| TACTGCAGTTGGATCAGGTT+TGG | + | chr1_1:65733533-65733552 | Msa0036890:CDS | 45.0% | |
| ! | TGGATCAGGTTTGGCTTCAT+TGG | + | chr1_1:65733542-65733561 | Msa0036890:CDS | 45.0% |
| AGGAATATGGCACTTCATGG+AGG | + | chr1_1:65733921-65733940 | Msa0036890:CDS | 45.0% | |
| ATACACCAATCGGTGTACCT+TGG | - | chr1_1:65733953-65733972 | None:intergenic | 45.0% | |
| ! | TACACCGATTGGTGTATCGA+TGG | + | chr1_1:65733956-65733975 | Msa0036890:CDS | 45.0% |
| CGTTTAGCCATTGCTTCCAT+TGG | + | chr1_1:65733987-65734006 | Msa0036890:CDS | 45.0% | |
| CTTTGAACATGAGTGGTGAC+AGG | - | chr1_1:65734176-65734195 | None:intergenic | 45.0% | |
| GCACAATGCTACTAAGAAGG+TGG | - | chr1_1:65734291-65734310 | None:intergenic | 45.0% | |
| GCCAAGAGAATTCTCACAGT+TGG | + | chr1_1:65734380-65734399 | Msa0036890:CDS | 45.0% | |
| ATGGTGAGTTGCATCCATCA+AGG | + | chr1_1:65734408-65734427 | Msa0036890:CDS | 45.0% | |
| GTCTCAGCTTCTGCATTAGA+GGG | - | chr1_1:65734514-65734533 | None:intergenic | 45.0% | |
| TGTCTCAGCTTCTGCATTAG+AGG | - | chr1_1:65734515-65734534 | None:intergenic | 45.0% | |
| !! | TTAGGGACAAGTTTGCTGAC+AGG | + | chr1_1:65734752-65734771 | Msa0036890:CDS | 45.0% |
| GGTGAGAAAATTAGGTCACC+TGG | + | chr1_1:65734773-65734792 | Msa0036890:CDS | 45.0% | |
| GAAAATTAGGTCACCTGGTG+AGG | + | chr1_1:65734778-65734797 | Msa0036890:CDS | 45.0% | |
| ACCTGGTGAGGAATGTGATA+AGG | + | chr1_1:65734790-65734809 | Msa0036890:CDS | 45.0% | |
| ACCTTATCACATTCCTCACC+AGG | - | chr1_1:65734794-65734813 | None:intergenic | 45.0% | |
| ! | GTTTTCACAGCACTGTGTGA+TGG | + | chr1_1:65734812-65734831 | Msa0036890:CDS | 45.0% |
| TGCTCCTCTACCTATTTGCT+AGG | + | chr1_1:65734880-65734899 | Msa0036890:CDS | 45.0% | |
| !! | TATATAATTAATTTATGTTA+AGG | + | chr1_1:65730507-65730526 | Msa0036890:intron | 5.0% |
| !! | ATATAATTAATTTATGTTAA+GGG | + | chr1_1:65730508-65730527 | Msa0036890:intron | 5.0% |
| !! | CTAAAATAAATAAAATATTT+AGG | - | chr1_1:65731074-65731093 | None:intergenic | 5.0% |
| !!! | CTAAATATTTTATTTATTTT+AGG | + | chr1_1:65731072-65731091 | Msa0036890:intron | 5.0% |
| !!! | AAATACTTAATATTTTATTT+GGG | - | chr1_1:65731484-65731503 | None:intergenic | 5.0% |
| !! | ATTATAACAATATTAAATAT+GGG | - | chr1_1:65732534-65732553 | None:intergenic | 5.0% |
| !! | AATTATAACAATATTAAATA+TGG | - | chr1_1:65732535-65732554 | None:intergenic | 5.0% |
| GCAGCCATACCCCAATTCAA+AGG | - | chr1_1:65729036-65729055 | None:intergenic | 50.0% | |
| GAAGGGTAGTCACCTAGATG+AGG | + | chr1_1:65729065-65729084 | Msa0036890:CDS | 50.0% | |
| CCATACGCTTCACCTCATCT+AGG | - | chr1_1:65729080-65729099 | None:intergenic | 50.0% | |
| CCTAGATGAGGTGAAGCGTA+TGG | + | chr1_1:65729077-65729096 | Msa0036890:CDS | 50.0% | |
| TGAGGTGAAGCGTATGGTAG+AGG | + | chr1_1:65729083-65729102 | Msa0036890:CDS | 50.0% | |
| GGTAGAGGAATACCGGAAAC+CGG | + | chr1_1:65729098-65729117 | Msa0036890:CDS | 50.0% | |
| ! | TTTCCACCTAAGGGCACAAC+CGG | - | chr1_1:65729120-65729139 | None:intergenic | 50.0% |
| GTTGTGCCCTTAGGTGGAAA+AGG | + | chr1_1:65729120-65729139 | Msa0036890:CDS | 50.0% | |
| GATAGCTATGGAGTGACCAC+TGG | + | chr1_1:65729273-65729292 | Msa0036890:CDS | 50.0% | |
| TATGGAGTGACCACTGGGTT+TGG | + | chr1_1:65729279-65729298 | Msa0036890:CDS | 50.0% | |
| GCACACCTACCCCAAAGTAA+GGG | - | chr1_1:65730110-65730129 | None:intergenic | 50.0% | |
| AGCACACCTACCCCAAAGTA+AGG | - | chr1_1:65730111-65730130 | None:intergenic | 50.0% | |
| TGTAGATCACCCTGCAGCTA+TGG | + | chr1_1:65731329-65731348 | Msa0036890:intron | 50.0% | |
| GTCATCTATTGCGGAACGGT+GGG | - | chr1_1:65732147-65732166 | None:intergenic | 50.0% | |
| AACCAACATGCCTGCTCTTG+TGG | - | chr1_1:65733217-65733236 | None:intergenic | 50.0% | |
| CGGCTAGCAGTGAGATTTGA+AGG | - | chr1_1:65734071-65734090 | None:intergenic | 50.0% | |
| TGCTAGCCGCAATCCAAGTT+TGG | + | chr1_1:65734082-65734101 | Msa0036890:CDS | 50.0% | |
| ! | GAGTGGTGACAGGATTAGCA+AGG | - | chr1_1:65734166-65734185 | None:intergenic | 50.0% |
| ! | GAGGGTATGTAGCACTGCAA+GGG | - | chr1_1:65734496-65734515 | None:intergenic | 50.0% |
| ! | AGAGGGTATGTAGCACTGCA+AGG | - | chr1_1:65734497-65734516 | None:intergenic | 50.0% |
| ! | GACCCTTTTGCCTAAAGAGG+TGG | + | chr1_1:65734631-65734650 | Msa0036890:CDS | 50.0% |
| ! | TCACAGCACTGTGTGATGGA+AGG | + | chr1_1:65734816-65734835 | Msa0036890:CDS | 50.0% |
| ! | CTAAGGGCACAACCGGTTTC+CGG | - | chr1_1:65729113-65729132 | None:intergenic | 55.0% |
| AAACCGGTTGTGCCCTTAGG+TGG | + | chr1_1:65729114-65729133 | Msa0036890:CDS | 55.0% | |
| TACCATCGTGGCGGTTGAAC+TGG | + | chr1_1:65729182-65729201 | Msa0036890:CDS | 55.0% | |
| TGAGGTTGCACCAAACCCAG+TGG | - | chr1_1:65729292-65729311 | None:intergenic | 55.0% | |
| GGTCATCTATTGCGGAACGG+TGG | - | chr1_1:65732148-65732167 | None:intergenic | 55.0% | |
| ATGCCTGCTCTTGTGGCTGT+GGG | - | chr1_1:65733210-65733229 | None:intergenic | 55.0% | |
| AGCCACAAGAGCAGGCATGT+TGG | + | chr1_1:65733212-65733231 | Msa0036890:CDS | 55.0% | |
| GCAGCAGCCTCAATTTGACC+AGG | - | chr1_1:65733687-65733706 | None:intergenic | 55.0% | |
| CGATTCGAACATCACCGCAG+TGG | + | chr1_1:65733805-65733824 | Msa0036890:CDS | 55.0% | |
| CGGAAACCGGTTGTGCCCTT+AGG | + | chr1_1:65729111-65729130 | Msa0036890:CDS | 60.0% | |
| CATCGTGGCGGTTGAACTGG+CGG | + | chr1_1:65729185-65729204 | Msa0036890:CDS | 60.0% | |
| AGACGGTTGGACCCACACAC+CGG | - | chr1_1:65731631-65731650 | None:intergenic | 60.0% | |
| CATGCCTGCTCTTGTGGCTG+TGG | - | chr1_1:65733211-65733230 | None:intergenic | 60.0% | |
| CGAACATCACCGCAGTGGCT+TGG | + | chr1_1:65733810-65733829 | Msa0036890:CDS | 60.0% | |
| ATCTGCGGTCCAAGCCACTG+CGG | - | chr1_1:65733822-65733841 | None:intergenic | 60.0% | |
| CGCCAGTTCAACCGCCACGA+TGG | - | chr1_1:65729187-65729206 | None:intergenic | 65.0% | |
| GGCGGTTGAACTGGCGGAAG+AGG | + | chr1_1:65729191-65729210 | Msa0036890:CDS | 65.0% | |
| CCTGCTCTTGTGGCTGTGGG+AGG | - | chr1_1:65733207-65733226 | None:intergenic | 65.0% | |
| CCTCCCACAGCCACAAGAGC+AGG | + | chr1_1:65733204-65733223 | Msa0036890:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 65728622 | 65735052 | 65728622 | ID=Msa0036890;Name=Msa0036890 |
| chr1_1 | mRNA | 65728622 | 65735052 | 65728622 | ID=Msa0036890-mRNA-1;Parent=Msa0036890;Name=Msa0036890-mRNA-1;_AED=0.00;_eAED=0.00;_QI=318|1|1|1|1|1|2|151|722 |
| chr1_1 | exon | 65728622 | 65729358 | 65728622 | ID=Msa0036890-mRNA-1:exon:21138;Parent=Msa0036890-mRNA-1 |
| chr1_1 | exon | 65733152 | 65735052 | 65733152 | ID=Msa0036890-mRNA-1:exon:21139;Parent=Msa0036890-mRNA-1 |
| chr1_1 | five_prime_UTR | 65728622 | 65728939 | 65728622 | ID=Msa0036890-mRNA-1:five_prime_utr;Parent=Msa0036890-mRNA-1 |
| chr1_1 | CDS | 65728940 | 65729358 | 65728940 | ID=Msa0036890-mRNA-1:cds;Parent=Msa0036890-mRNA-1 |
| chr1_1 | CDS | 65733152 | 65734901 | 65733152 | ID=Msa0036890-mRNA-1:cds;Parent=Msa0036890-mRNA-1 |
| chr1_1 | three_prime_UTR | 65734902 | 65735052 | 65734902 | ID=Msa0036890-mRNA-1:three_prime_utr;Parent=Msa0036890-mRNA-1 |
| Gene Sequence |
| Protein sequence |
