Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0145680 | XP_013466045.1 | 97.820 | 367 | 8 | 0 | 1 | 367 | 1 | 367 | 0.0 | 745 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0145680 | sp|Q9S7G2|GATL2_ARATH | 68.539 | 356 | 87 | 6 | 13 | 365 | 5 | 338 | 2.61e-177 | 498 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0145680 | A0A072VDI5 | 97.820 | 367 | 8 | 0 | 1 | 367 | 1 | 367 | 0.0 | 745 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0036890 | Msa0145680 | 0.867441 | 1.365968e-65 | -8.615850e-47 |
| Msa0050950 | Msa0145680 | 0.909264 | 6.904563e-82 | -8.615850e-47 |
| Msa0084970 | Msa0145680 | 0.877093 | 8.281938e-69 | -8.615850e-47 |
| Msa0101340 | Msa0145680 | 0.993319 | 6.456056e-199 | -8.615850e-47 |
| Msa0130990 | Msa0145680 | 0.837682 | 4.500246e-57 | -8.615850e-47 |
| Msa0145680 | Msa0176900 | 0.854436 | 1.232874e-61 | -8.615850e-47 |
| Msa0145680 | Msa0235710 | 0.801530 | 8.622506e-49 | -8.615850e-47 |
| Msa0145680 | Msa0327670 | 0.804735 | 1.872856e-49 | -8.615850e-47 |
| Msa0145680 | Msa0389500 | 0.829530 | 4.889325e-55 | -8.615850e-47 |
| Msa0145680 | Msa0400420 | 0.801081 | 1.065182e-48 | -8.615850e-47 |
| Msa0145680 | Msa0519760 | 0.811275 | 7.593634e-51 | -8.615850e-47 |
| Msa0145680 | Msa0519810 | 0.802170 | 6.371533e-49 | -8.615850e-47 |
| Msa0145680 | Msa0519840 | 0.808909 | 2.456635e-50 | -8.615850e-47 |
| Msa0145680 | Msa0679230 | 0.813423 | 2.579353e-51 | -8.615850e-47 |
| Msa0145680 | Msa0783850 | 0.825097 | 5.642952e-54 | -8.615850e-47 |
| Msa0145680 | Msa0818710 | 0.820522 | 6.560031e-53 | -8.615850e-47 |
| Msa0145680 | Msa0993740 | 0.806652 | 7.413704e-50 | -8.615850e-47 |
| Msa0145680 | Msa1115740 | 0.814037 | 1.888754e-51 | -8.615850e-47 |
| Msa0145680 | Msa1427110 | 0.809646 | 1.707494e-50 | -8.615850e-47 |
| Msa0145680 | Msa1445050 | 0.826668 | 2.390278e-54 | -8.615850e-47 |
| Msa0145680 | Msa1459360 | 0.861948 | 7.163629e-64 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0145680 | MtrunA17_Chr1g0154521 | 97.820 | 367 | 8 | 0 | 1 | 367 | 1 | 367 | 0.0 | 745 |
| Msa0145680 | MtrunA17_Chr3g0141321 | 80.183 | 328 | 52 | 2 | 40 | 367 | 26 | 340 | 0.0 | 548 |
| Msa0145680 | MtrunA17_Chr5g0403501 | 76.205 | 332 | 68 | 3 | 46 | 367 | 37 | 367 | 0.0 | 530 |
| Msa0145680 | MtrunA17_Chr8g0373671 | 73.860 | 329 | 77 | 4 | 40 | 366 | 23 | 344 | 0.0 | 515 |
| Msa0145680 | MtrunA17_Chr3g0127611 | 62.145 | 317 | 101 | 4 | 46 | 360 | 34 | 333 | 1.47e-146 | 418 |
| Msa0145680 | MtrunA17_Chr6g0451981 | 55.432 | 359 | 141 | 6 | 10 | 358 | 10 | 359 | 1.63e-140 | 404 |
| Msa0145680 | MtrunA17_Chr7g0259321 | 59.048 | 315 | 108 | 2 | 46 | 360 | 51 | 344 | 1.29e-138 | 398 |
| Msa0145680 | MtrunA17_Chr7g0269751 | 54.775 | 356 | 137 | 6 | 12 | 358 | 10 | 350 | 1.41e-137 | 395 |
| Msa0145680 | MtrunA17_Chr5g0414981 | 55.072 | 345 | 142 | 5 | 20 | 360 | 39 | 374 | 8.29e-136 | 394 |
| Msa0145680 | MtrunA17_Chr4g0066331 | 58.675 | 317 | 112 | 4 | 46 | 361 | 42 | 340 | 2.52e-135 | 389 |
| Msa0145680 | MtrunA17_Chr1g0196511 | 58.466 | 313 | 109 | 2 | 46 | 358 | 54 | 345 | 6.10e-133 | 384 |
| Msa0145680 | MtrunA17_Chr2g0308241 | 32.642 | 193 | 118 | 6 | 165 | 356 | 340 | 521 | 3.31e-21 | 95.1 |
| Msa0145680 | MtrunA17_Chr4g0061711 | 33.161 | 193 | 117 | 6 | 165 | 356 | 340 | 521 | 2.46e-20 | 92.4 |
| Msa0145680 | MtrunA17_Chr3g0138381 | 27.843 | 255 | 171 | 8 | 111 | 363 | 414 | 657 | 4.06e-19 | 89.0 |
| Msa0145680 | MtrunA17_Chr2g0283461 | 31.351 | 185 | 119 | 5 | 165 | 349 | 339 | 515 | 6.37e-18 | 85.1 |
| Msa0145680 | MtrunA17_Chr2g0319311 | 30.151 | 199 | 122 | 8 | 165 | 356 | 338 | 526 | 6.77e-18 | 85.1 |
| Msa0145680 | MtrunA17_Chr8g0383241 | 29.444 | 180 | 114 | 5 | 165 | 341 | 295 | 464 | 1.19e-17 | 84.3 |
| Msa0145680 | MtrunA17_Chr7g0235161 | 28.643 | 199 | 132 | 6 | 165 | 363 | 364 | 552 | 2.49e-16 | 80.5 |
| Msa0145680 | MtrunA17_Chr2g0290961 | 29.444 | 180 | 114 | 5 | 165 | 341 | 471 | 640 | 3.49e-16 | 80.1 |
| Msa0145680 | MtrunA17_Chr7g0218571 | 27.638 | 199 | 127 | 7 | 165 | 356 | 334 | 522 | 4.43e-16 | 79.7 |
| Msa0145680 | MtrunA17_Chr7g0246371 | 27.136 | 199 | 135 | 5 | 165 | 363 | 468 | 656 | 6.60e-16 | 79.3 |
| Msa0145680 | MtrunA17_Chr8g0351091 | 28.249 | 177 | 116 | 5 | 165 | 339 | 416 | 583 | 9.07e-16 | 78.6 |
| Msa0145680 | MtrunA17_Chr6g0456071 | 28.646 | 192 | 127 | 6 | 165 | 356 | 359 | 540 | 1.23e-14 | 75.1 |
| Msa0145680 | MtrunA17_Chr3g0097091 | 21.835 | 316 | 188 | 10 | 86 | 356 | 214 | 515 | 1.35e-14 | 75.1 |
| Msa0145680 | MtrunA17_Chr7g0260711 | 26.441 | 295 | 185 | 14 | 64 | 345 | 356 | 631 | 9.53e-14 | 72.8 |
| Msa0145680 | MtrunA17_Chr6g0454101 | 28.947 | 114 | 73 | 3 | 245 | 356 | 410 | 517 | 1.59e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0145680 | AT3G50760.1 | 68.539 | 356 | 87 | 6 | 13 | 365 | 5 | 338 | 2.65e-178 | 498 |
| Msa0145680 | AT1G19300.1 | 76.061 | 330 | 76 | 2 | 40 | 367 | 23 | 351 | 1.14e-175 | 492 |
| Msa0145680 | AT4G02130.3 | 60.759 | 316 | 110 | 3 | 46 | 360 | 41 | 343 | 5.84e-145 | 414 |
| Msa0145680 | AT4G02130.1 | 60.759 | 316 | 110 | 3 | 46 | 360 | 41 | 343 | 5.84e-145 | 414 |
| Msa0145680 | AT4G02130.2 | 60.759 | 316 | 110 | 3 | 46 | 360 | 41 | 343 | 5.84e-145 | 414 |
| Msa0145680 | AT3G62660.1 | 67.138 | 283 | 89 | 2 | 76 | 358 | 77 | 355 | 4.35e-142 | 407 |
| Msa0145680 | AT1G02720.1 | 56.213 | 338 | 136 | 3 | 24 | 360 | 32 | 358 | 2.15e-139 | 400 |
| Msa0145680 | AT1G02720.2 | 56.213 | 338 | 136 | 3 | 24 | 360 | 32 | 358 | 2.15e-139 | 400 |
| Msa0145680 | AT1G70090.1 | 52.575 | 369 | 160 | 5 | 1 | 360 | 1 | 363 | 1.82e-138 | 399 |
| Msa0145680 | AT1G70090.2 | 52.575 | 369 | 160 | 5 | 1 | 360 | 1 | 363 | 1.82e-138 | 399 |
| Msa0145680 | AT1G13250.1 | 60.185 | 324 | 118 | 4 | 46 | 367 | 31 | 345 | 7.26e-138 | 396 |
| Msa0145680 | AT3G06260.1 | 57.729 | 317 | 115 | 3 | 46 | 361 | 46 | 344 | 1.59e-137 | 395 |
| Msa0145680 | AT1G24170.1 | 57.994 | 319 | 128 | 3 | 46 | 360 | 50 | 366 | 3.14e-136 | 394 |
| Msa0145680 | AT3G28340.1 | 57.595 | 316 | 124 | 4 | 48 | 361 | 44 | 351 | 1.68e-135 | 391 |
| Msa0145680 | AT1G18580.1 | 32.258 | 186 | 117 | 5 | 165 | 349 | 342 | 519 | 6.60e-21 | 94.4 |
| Msa0145680 | AT5G47780.1 | 31.667 | 180 | 110 | 5 | 165 | 341 | 420 | 589 | 1.21e-19 | 90.9 |
| Msa0145680 | AT5G54690.1 | 30.151 | 199 | 122 | 8 | 165 | 356 | 331 | 519 | 8.01e-19 | 88.2 |
| Msa0145680 | AT3G61130.1 | 30.198 | 202 | 125 | 7 | 165 | 363 | 477 | 665 | 1.00e-17 | 85.1 |
| Msa0145680 | AT4G38270.2 | 27.869 | 244 | 167 | 6 | 115 | 357 | 430 | 665 | 1.83e-17 | 84.3 |
| Msa0145680 | AT4G38270.1 | 27.869 | 244 | 167 | 6 | 115 | 357 | 434 | 669 | 2.05e-17 | 84.3 |
| Msa0145680 | AT3G25140.1 | 29.000 | 200 | 123 | 5 | 165 | 358 | 363 | 549 | 7.83e-17 | 82.4 |
| Msa0145680 | AT3G01040.1 | 25.287 | 261 | 172 | 9 | 110 | 356 | 233 | 484 | 8.08e-17 | 82.0 |
| Msa0145680 | AT2G30575.1 | 27.715 | 267 | 166 | 12 | 95 | 345 | 332 | 587 | 9.43e-17 | 82.0 |
| Msa0145680 | AT3G58790.2 | 30.000 | 200 | 122 | 8 | 165 | 356 | 204 | 393 | 1.72e-16 | 80.9 |
| Msa0145680 | AT3G01040.2 | 27.778 | 198 | 128 | 7 | 165 | 356 | 329 | 517 | 1.72e-16 | 81.3 |
| Msa0145680 | AT3G01040.3 | 27.778 | 198 | 128 | 7 | 165 | 356 | 329 | 517 | 1.72e-16 | 81.3 |
| Msa0145680 | AT3G58790.1 | 30.000 | 200 | 122 | 8 | 165 | 356 | 336 | 525 | 1.79e-16 | 81.3 |
| Msa0145680 | AT1G06780.1 | 27.586 | 261 | 162 | 9 | 95 | 339 | 311 | 560 | 2.11e-16 | 80.9 |
| Msa0145680 | AT1G06780.2 | 27.586 | 261 | 162 | 9 | 95 | 339 | 324 | 573 | 2.22e-16 | 80.9 |
| Msa0145680 | AT5G15470.1 | 26.768 | 198 | 130 | 7 | 165 | 356 | 329 | 517 | 6.38e-15 | 76.3 |
| Msa0145680 | AT2G46480.3 | 24.042 | 287 | 181 | 9 | 78 | 363 | 282 | 532 | 1.05e-14 | 75.9 |
| Msa0145680 | AT2G46480.4 | 24.042 | 287 | 181 | 9 | 78 | 363 | 295 | 545 | 1.07e-14 | 75.9 |
| Msa0145680 | AT2G20810.1 | 32.663 | 199 | 123 | 7 | 165 | 363 | 342 | 529 | 5.25e-13 | 70.5 |
| Msa0145680 | AT3G02350.1 | 29.167 | 192 | 126 | 6 | 165 | 356 | 365 | 546 | 7.03e-12 | 67.0 |
| Msa0145680 | AT2G46480.2 | 22.300 | 287 | 161 | 10 | 78 | 363 | 282 | 507 | 4.27e-11 | 64.7 |
| Msa0145680 | AT2G46480.1 | 22.300 | 287 | 161 | 10 | 78 | 363 | 295 | 520 | 5.44e-11 | 64.3 |
Find 72 sgRNAs with CRISPR-Local
Find 184 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGTCCTTTGGATGCTCTT+TGG | 0.179612 | 1_4:+5385168 | Msa0145680:CDS |
| TTGTCCTTTGGATGCTCTTT+GGG | 0.232558 | 1_4:+5385169 | Msa0145680:CDS |
| TTCGATGATTCAATCGTTTC+GGG | 0.244627 | 1_4:+5384561 | Msa0145680:CDS |
| CAATTATGCAAGAAGCTATT+TGG | 0.253341 | 1_4:+5384626 | Msa0145680:CDS |
| TTTACTTCACACCAACATTT+TGG | 0.256817 | 1_4:+5384799 | Msa0145680:CDS |
| TCATGTTCGGTGTCTTCTTC+TGG | 0.259724 | 1_4:-5384321 | None:intergenic |
| AATCAAGAATCAAGAGAAAA+TGG | 0.308067 | 1_4:-5385215 | None:intergenic |
| TTACTTTAATACCGGGGTTA+TGG | 0.328231 | 1_4:+5384866 | Msa0145680:CDS |
| TTTCGATGATTCAATCGTTT+CGG | 0.340870 | 1_4:+5384560 | Msa0145680:CDS |
| TGCTAATAGACCTTGTCCTT+TGG | 0.372206 | 1_4:+5385157 | Msa0145680:CDS |
| AAACCTTGTTACTTTAATAC+CGG | 0.397438 | 1_4:+5384858 | Msa0145680:CDS |
| TCACTGATGGAGGCACAATT+TGG | 0.401749 | 1_4:-5384297 | None:intergenic |
| GTCTTCTTCTGGTTCACTGA+TGG | 0.403834 | 1_4:-5384310 | None:intergenic |
| TTGTTCCTGTGGATCATAGA+TGG | 0.412121 | 1_4:+5385021 | Msa0145680:CDS |
| GTCCAGTGAGTTTATTGCAT+TGG | 0.440935 | 1_4:+5385102 | Msa0145680:CDS |
| TGCAATAAACTCACTGGACC+TGG | 0.441630 | 1_4:-5385098 | None:intergenic |
| AATTGTAGACTTGGAATTTG+AGG | 0.447752 | 1_4:-5384539 | None:intergenic |
| AGGTAAACCATGGGTGAGAT+TGG | 0.454495 | 1_4:+5385133 | Msa0145680:CDS |
| GCGAATGTTAAAGACAAAGA+TGG | 0.456493 | 1_4:-5384828 | None:intergenic |
| TTATTGCATTGGAGTGGAAA+AGG | 0.458081 | 1_4:+5385113 | Msa0145680:CDS |
| TGTAAGAAAAGTTGTGTACT+TGG | 0.460356 | 1_4:+5384668 | Msa0145680:CDS |
| TTTGGTGAGTTGTAGAATTG+AGG | 0.465286 | 1_4:-5384279 | None:intergenic |
| GACAGAGAGGATTGCAGCCA+TGG | 0.467068 | 1_4:-5384418 | None:intergenic |
| GGTGTCTGCAAAAGATCATA+AGG | 0.476961 | 1_4:-5385194 | None:intergenic |
| AGATGGAATCAACATGGTCT+TGG | 0.481062 | 1_4:+5385038 | Msa0145680:CDS |
| TTGGTGAGTTGTAGAATTGA+GGG | 0.481706 | 1_4:-5384278 | None:intergenic |
| TGCAGGGGAAATTGTTCCTG+TGG | 0.488544 | 1_4:+5385010 | Msa0145680:CDS |
| TTCTTCTGGTTCACTGATGG+AGG | 0.490980 | 1_4:-5384307 | None:intergenic |
| AATCATCGAAATTGTAGACT+TGG | 0.491592 | 1_4:-5384548 | None:intergenic |
| TAGACTTGGAATTTGAGGTA+AGG | 0.496272 | 1_4:-5384534 | None:intergenic |
| AACCTTGTTACTTTAATACC+GGG | 0.498666 | 1_4:+5384859 | Msa0145680:CDS |
| CTTTGTCGAGATCTTCATCC+AGG | 0.499442 | 1_4:+5385080 | Msa0145680:CDS |
| AGACTTGGAATTTGAGGTAA+GGG | 0.499769 | 1_4:-5384533 | None:intergenic |
| AACATATATCCGAGGTTCCA+TGG | 0.527756 | 1_4:+5384401 | Msa0145680:CDS |
| AACAAAGATTGAGGAATGGA+TGG | 0.528450 | 1_4:+5384926 | Msa0145680:CDS |
| CGATATCATCAACTAAGATA+AGG | 0.533837 | 1_4:-5384698 | None:intergenic |
| CGAATGTTAAAGACAAAGAT+GGG | 0.534888 | 1_4:-5384827 | None:intergenic |
| TGTTAAAGACAAAGATGGGT+TGG | 0.537673 | 1_4:-5384823 | None:intergenic |
| CTCCAATGCAATAAACTCAC+TGG | 0.539210 | 1_4:-5385104 | None:intergenic |
| ATGAAGAAGTGAAGTGTTTG+AGG | 0.542144 | 1_4:-5384490 | None:intergenic |
| AGGATGAGAATCTATGAACT+TGG | 0.551100 | 1_4:+5384960 | Msa0145680:CDS |
| TTTGTGGACATGATGAGTGT+TGG | 0.558842 | 1_4:-5384443 | None:intergenic |
| GTGAGTTTATTGCATTGGAG+TGG | 0.561039 | 1_4:+5385107 | Msa0145680:CDS |
| ATCAAGTGCTGATCGAATTG+AGG | 0.561859 | 1_4:-5384595 | None:intergenic |
| GTGGACATGATGAGTGTTGG+AGG | 0.566977 | 1_4:-5384440 | None:intergenic |
| AATGGATGGAATTACAAAAG+AGG | 0.570341 | 1_4:+5384940 | Msa0145680:CDS |
| TGATTCCATCTATGATCCAC+AGG | 0.576078 | 1_4:-5385026 | None:intergenic |
| TGGAATCAACATGGTCTTGG+TGG | 0.582134 | 1_4:+5385041 | Msa0145680:CDS |
| TTAGCATCCAATCTCACCCA+TGG | 0.582810 | 1_4:-5385140 | None:intergenic |
| TGGTGAGTTGTAGAATTGAG+GGG | 0.584816 | 1_4:-5384277 | None:intergenic |
| TAGCTTCTTGCATAATTGAG+TGG | 0.588805 | 1_4:-5384621 | None:intergenic |
| ATATGTGTCAGTGTCATGTT+CGG | 0.593341 | 1_4:-5384334 | None:intergenic |
| TGATTACACAACAAAGATTG+AGG | 0.596745 | 1_4:+5384917 | Msa0145680:CDS |
| CAAAGAGCATCCAAAGGACA+AGG | 0.605477 | 1_4:-5385167 | None:intergenic |
| GGATTGCAGCCATGGAACCT+CGG | 0.623683 | 1_4:-5384410 | None:intergenic |
| TAGAGATTGAAGACACAAGA+GGG | 0.627737 | 1_4:-5384184 | None:intergenic |
| ACCCCGGTATTAAAGTAACA+AGG | 0.631984 | 1_4:-5384861 | None:intergenic |
| AAATTTGCATTGCAATACTC+CGG | 0.633009 | 1_4:-5384771 | None:intergenic |
| ATGAGTGTTGGAGGACAGAG+AGG | 0.637026 | 1_4:-5384431 | None:intergenic |
| GGAGTGGAAAAGGTAAACCA+TGG | 0.642822 | 1_4:+5385123 | Msa0145680:CDS |
| CTCTGAGGAAGCAGTCCATG+TGG | 0.643941 | 1_4:+5384362 | Msa0145680:CDS |
| TAGATCAATTACCATAACCC+CGG | 0.646191 | 1_4:-5384877 | None:intergenic |
| GATGGGTTGGACCAAAATGT+TGG | 0.647131 | 1_4:-5384810 | None:intergenic |
| ACACAACAAAGATTGAGGAA+TGG | 0.651197 | 1_4:+5384922 | Msa0145680:CDS |
| TGTCTAATGTCATTGCCACA+TGG | 0.655175 | 1_4:-5384377 | None:intergenic |
| ATAGAGATTGAAGACACAAG+AGG | 0.656250 | 1_4:-5384185 | None:intergenic |
| GAGTGGAAAAGGTAAACCAT+GGG | 0.662161 | 1_4:+5385124 | Msa0145680:CDS |
| ACCTTGTTACTTTAATACCG+GGG | 0.664037 | 1_4:+5384860 | Msa0145680:CDS |
| GGTGCCCAAAGAGCATCCAA+AGG | 0.694592 | 1_4:-5385173 | None:intergenic |
| GATCATAGATGGAATCAACA+TGG | 0.708687 | 1_4:+5385032 | Msa0145680:CDS |
| TTAGACACAACATATATCCG+AGG | 0.716181 | 1_4:+5384393 | Msa0145680:CDS |
| TGACACATATATCTGCTCTG+AGG | 0.739745 | 1_4:+5384347 | Msa0145680:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAATAAGAGTTTTGGTTT+TGG | - | chr1_4:5384150-5384169 | None:intergenic | 20.0% |
| !!! | AGAAAGAAAAATAAGAGTTT+TGG | - | chr1_4:5384156-5384175 | None:intergenic | 20.0% |
| !!! | AATTGTTTTTCTTGTTTTTG+AGG | - | chr1_4:5384235-5384254 | None:intergenic | 20.0% |
| !!! | AAAAATAAGAGTTTTGGTTT+TGG | - | chr1_4:5384150-5384169 | None:intergenic | 20.0% |
| !!! | AGAAAGAAAAATAAGAGTTT+TGG | - | chr1_4:5384156-5384175 | None:intergenic | 20.0% |
| !!! | AATTGTTTTTCTTGTTTTTG+AGG | - | chr1_4:5384235-5384254 | None:intergenic | 20.0% |
| !!! | TGTTTTTGAGGCATTTTTTT+TGG | - | chr1_4:5384223-5384242 | None:intergenic | 25.0% |
| !! | ACAACTTTTCTTACACATAA+TGG | - | chr1_4:5384663-5384682 | None:intergenic | 25.0% |
| !!! | AAACCTTGTTACTTTAATAC+CGG | + | chr1_4:5384858-5384877 | Msa0145680:CDS | 25.0% |
| ! | TGGTAATTGATCTAGAAAAA+TGG | + | chr1_4:5384886-5384905 | Msa0145680:CDS | 25.0% |
| !!! | TGTTTTTGAGGCATTTTTTT+TGG | - | chr1_4:5384223-5384242 | None:intergenic | 25.0% |
| !! | ACAACTTTTCTTACACATAA+TGG | - | chr1_4:5384663-5384682 | None:intergenic | 25.0% |
| !!! | AAACCTTGTTACTTTAATAC+CGG | + | chr1_4:5384858-5384877 | Msa0145680:CDS | 25.0% |
| ! | TGGTAATTGATCTAGAAAAA+TGG | + | chr1_4:5384886-5384905 | Msa0145680:CDS | 25.0% |
| ! | AAGTGAAAGATGATGTTTTG+TGG | - | chr1_4:5384462-5384481 | None:intergenic | 30.0% |
| !!! | AGGGAATGATTTTGAGATTA+TGG | - | chr1_4:5384517-5384536 | None:intergenic | 30.0% |
| AATTGTAGACTTGGAATTTG+AGG | - | chr1_4:5384542-5384561 | None:intergenic | 30.0% | |
| AATCATCGAAATTGTAGACT+TGG | - | chr1_4:5384551-5384570 | None:intergenic | 30.0% | |
| TTTCGATGATTCAATCGTTT+CGG | + | chr1_4:5384560-5384579 | Msa0145680:CDS | 30.0% | |
| CAATTATGCAAGAAGCTATT+TGG | + | chr1_4:5384626-5384645 | Msa0145680:CDS | 30.0% | |
| TGTAAGAAAAGTTGTGTACT+TGG | + | chr1_4:5384668-5384687 | Msa0145680:CDS | 30.0% | |
| CGATATCATCAACTAAGATA+AGG | - | chr1_4:5384701-5384720 | None:intergenic | 30.0% | |
| !!! | TGCCAAAACTGCATTTTTTT+CGG | - | chr1_4:5384748-5384767 | None:intergenic | 30.0% |
| AAATTTGCATTGCAATACTC+CGG | - | chr1_4:5384774-5384793 | None:intergenic | 30.0% | |
| ! | TTTACTTCACACCAACATTT+TGG | + | chr1_4:5384799-5384818 | Msa0145680:CDS | 30.0% |
| CGAATGTTAAAGACAAAGAT+GGG | - | chr1_4:5384830-5384849 | None:intergenic | 30.0% | |
| !! | AACCTTGTTACTTTAATACC+GGG | + | chr1_4:5384859-5384878 | Msa0145680:CDS | 30.0% |
| TGATTACACAACAAAGATTG+AGG | + | chr1_4:5384917-5384936 | Msa0145680:CDS | 30.0% | |
| AATGGATGGAATTACAAAAG+AGG | + | chr1_4:5384940-5384959 | Msa0145680:CDS | 30.0% | |
| !!! | CTTTTTTGCTTGTTTTTGCA+GGG | + | chr1_4:5384994-5385013 | Msa0145680:CDS | 30.0% |
| !!! | TTTTTTGCTTGTTTTTGCAG+GGG | + | chr1_4:5384995-5385014 | Msa0145680:CDS | 30.0% |
| ! | AAGTGAAAGATGATGTTTTG+TGG | - | chr1_4:5384462-5384481 | None:intergenic | 30.0% |
| !!! | AGGGAATGATTTTGAGATTA+TGG | - | chr1_4:5384517-5384536 | None:intergenic | 30.0% |
| AATTGTAGACTTGGAATTTG+AGG | - | chr1_4:5384542-5384561 | None:intergenic | 30.0% | |
| AATCATCGAAATTGTAGACT+TGG | - | chr1_4:5384551-5384570 | None:intergenic | 30.0% | |
| TTTCGATGATTCAATCGTTT+CGG | + | chr1_4:5384560-5384579 | Msa0145680:CDS | 30.0% | |
| CAATTATGCAAGAAGCTATT+TGG | + | chr1_4:5384626-5384645 | Msa0145680:CDS | 30.0% | |
| TGTAAGAAAAGTTGTGTACT+TGG | + | chr1_4:5384668-5384687 | Msa0145680:CDS | 30.0% | |
| CGATATCATCAACTAAGATA+AGG | - | chr1_4:5384701-5384720 | None:intergenic | 30.0% | |
| !!! | TGCCAAAACTGCATTTTTTT+CGG | - | chr1_4:5384748-5384767 | None:intergenic | 30.0% |
| AAATTTGCATTGCAATACTC+CGG | - | chr1_4:5384774-5384793 | None:intergenic | 30.0% | |
| ! | TTTACTTCACACCAACATTT+TGG | + | chr1_4:5384799-5384818 | Msa0145680:CDS | 30.0% |
| CGAATGTTAAAGACAAAGAT+GGG | - | chr1_4:5384830-5384849 | None:intergenic | 30.0% | |
| !! | AACCTTGTTACTTTAATACC+GGG | + | chr1_4:5384859-5384878 | Msa0145680:CDS | 30.0% |
| TGATTACACAACAAAGATTG+AGG | + | chr1_4:5384917-5384936 | Msa0145680:CDS | 30.0% | |
| AATGGATGGAATTACAAAAG+AGG | + | chr1_4:5384940-5384959 | Msa0145680:CDS | 30.0% | |
| !!! | CTTTTTTGCTTGTTTTTGCA+GGG | + | chr1_4:5384994-5385013 | Msa0145680:CDS | 30.0% |
| !!! | TTTTTTGCTTGTTTTTGCAG+GGG | + | chr1_4:5384995-5385014 | Msa0145680:CDS | 30.0% |
| TAGAGATTGAAGACACAAGA+GGG | - | chr1_4:5384187-5384206 | None:intergenic | 35.0% | |
| ATAGAGATTGAAGACACAAG+AGG | - | chr1_4:5384188-5384207 | None:intergenic | 35.0% | |
| !!! | TGAGGCATTTTTTTTGGTGT+TGG | - | chr1_4:5384217-5384236 | None:intergenic | 35.0% |
| TTGGTGAGTTGTAGAATTGA+GGG | - | chr1_4:5384281-5384300 | None:intergenic | 35.0% | |
| TTTGGTGAGTTGTAGAATTG+AGG | - | chr1_4:5384282-5384301 | None:intergenic | 35.0% | |
| ATATGTGTCAGTGTCATGTT+CGG | - | chr1_4:5384337-5384356 | None:intergenic | 35.0% | |
| TTAGACACAACATATATCCG+AGG | + | chr1_4:5384393-5384412 | Msa0145680:CDS | 35.0% | |
| ! | ATGAAGAAGTGAAGTGTTTG+AGG | - | chr1_4:5384493-5384512 | None:intergenic | 35.0% |
| ! | AGACTTGGAATTTGAGGTAA+GGG | - | chr1_4:5384536-5384555 | None:intergenic | 35.0% |
| ! | TAGACTTGGAATTTGAGGTA+AGG | - | chr1_4:5384537-5384556 | None:intergenic | 35.0% |
| TTCGATGATTCAATCGTTTC+GGG | + | chr1_4:5384561-5384580 | Msa0145680:CDS | 35.0% | |
| TAGCTTCTTGCATAATTGAG+TGG | - | chr1_4:5384624-5384643 | None:intergenic | 35.0% | |
| !!! | ACTGCATTTTTTTCGGCTAA+TGG | - | chr1_4:5384741-5384760 | None:intergenic | 35.0% |
| ! | AGCCGAAAAAAATGCAGTTT+TGG | + | chr1_4:5384743-5384762 | Msa0145680:CDS | 35.0% |
| TGTTAAAGACAAAGATGGGT+TGG | - | chr1_4:5384826-5384845 | None:intergenic | 35.0% | |
| GCGAATGTTAAAGACAAAGA+TGG | - | chr1_4:5384831-5384850 | None:intergenic | 35.0% | |
| !! | ACCTTGTTACTTTAATACCG+GGG | + | chr1_4:5384860-5384879 | Msa0145680:CDS | 35.0% |
| TTACTTTAATACCGGGGTTA+TGG | + | chr1_4:5384866-5384885 | Msa0145680:CDS | 35.0% | |
| TAGATCAATTACCATAACCC+CGG | - | chr1_4:5384880-5384899 | None:intergenic | 35.0% | |
| ACACAACAAAGATTGAGGAA+TGG | + | chr1_4:5384922-5384941 | Msa0145680:CDS | 35.0% | |
| AACAAAGATTGAGGAATGGA+TGG | + | chr1_4:5384926-5384945 | Msa0145680:CDS | 35.0% | |
| AGGATGAGAATCTATGAACT+TGG | + | chr1_4:5384960-5384979 | Msa0145680:CDS | 35.0% | |
| GCAAAAACAAGCAAAAAAGG+TGG | - | chr1_4:5384993-5385012 | None:intergenic | 35.0% | |
| CCTGCAAAAACAAGCAAAAA+AGG | - | chr1_4:5384996-5385015 | None:intergenic | 35.0% | |
| !!! | CCTTTTTTGCTTGTTTTTGC+AGG | + | chr1_4:5384993-5385012 | Msa0145680:CDS | 35.0% |
| GATCATAGATGGAATCAACA+TGG | + | chr1_4:5385032-5385051 | Msa0145680:CDS | 35.0% | |
| TTATTGCATTGGAGTGGAAA+AGG | + | chr1_4:5385113-5385132 | Msa0145680:CDS | 35.0% | |
| TAGAGATTGAAGACACAAGA+GGG | - | chr1_4:5384187-5384206 | None:intergenic | 35.0% | |
| ATAGAGATTGAAGACACAAG+AGG | - | chr1_4:5384188-5384207 | None:intergenic | 35.0% | |
| !!! | TGAGGCATTTTTTTTGGTGT+TGG | - | chr1_4:5384217-5384236 | None:intergenic | 35.0% |
| TTGGTGAGTTGTAGAATTGA+GGG | - | chr1_4:5384281-5384300 | None:intergenic | 35.0% | |
| TTTGGTGAGTTGTAGAATTG+AGG | - | chr1_4:5384282-5384301 | None:intergenic | 35.0% | |
| ATATGTGTCAGTGTCATGTT+CGG | - | chr1_4:5384337-5384356 | None:intergenic | 35.0% | |
| TTAGACACAACATATATCCG+AGG | + | chr1_4:5384393-5384412 | Msa0145680:CDS | 35.0% | |
| ! | ATGAAGAAGTGAAGTGTTTG+AGG | - | chr1_4:5384493-5384512 | None:intergenic | 35.0% |
| ! | AGACTTGGAATTTGAGGTAA+GGG | - | chr1_4:5384536-5384555 | None:intergenic | 35.0% |
| ! | TAGACTTGGAATTTGAGGTA+AGG | - | chr1_4:5384537-5384556 | None:intergenic | 35.0% |
| TTCGATGATTCAATCGTTTC+GGG | + | chr1_4:5384561-5384580 | Msa0145680:CDS | 35.0% | |
| TAGCTTCTTGCATAATTGAG+TGG | - | chr1_4:5384624-5384643 | None:intergenic | 35.0% | |
| !!! | ACTGCATTTTTTTCGGCTAA+TGG | - | chr1_4:5384741-5384760 | None:intergenic | 35.0% |
| ! | AGCCGAAAAAAATGCAGTTT+TGG | + | chr1_4:5384743-5384762 | Msa0145680:CDS | 35.0% |
| TGTTAAAGACAAAGATGGGT+TGG | - | chr1_4:5384826-5384845 | None:intergenic | 35.0% | |
| GCGAATGTTAAAGACAAAGA+TGG | - | chr1_4:5384831-5384850 | None:intergenic | 35.0% | |
| !! | ACCTTGTTACTTTAATACCG+GGG | + | chr1_4:5384860-5384879 | Msa0145680:CDS | 35.0% |
| TTACTTTAATACCGGGGTTA+TGG | + | chr1_4:5384866-5384885 | Msa0145680:CDS | 35.0% | |
| TAGATCAATTACCATAACCC+CGG | - | chr1_4:5384880-5384899 | None:intergenic | 35.0% | |
| ACACAACAAAGATTGAGGAA+TGG | + | chr1_4:5384922-5384941 | Msa0145680:CDS | 35.0% | |
| AACAAAGATTGAGGAATGGA+TGG | + | chr1_4:5384926-5384945 | Msa0145680:CDS | 35.0% | |
| AGGATGAGAATCTATGAACT+TGG | + | chr1_4:5384960-5384979 | Msa0145680:CDS | 35.0% | |
| GCAAAAACAAGCAAAAAAGG+TGG | - | chr1_4:5384993-5385012 | None:intergenic | 35.0% | |
| CCTGCAAAAACAAGCAAAAA+AGG | - | chr1_4:5384996-5385015 | None:intergenic | 35.0% | |
| !!! | CCTTTTTTGCTTGTTTTTGC+AGG | + | chr1_4:5384993-5385012 | Msa0145680:CDS | 35.0% |
| GATCATAGATGGAATCAACA+TGG | + | chr1_4:5385032-5385051 | Msa0145680:CDS | 35.0% | |
| TTATTGCATTGGAGTGGAAA+AGG | + | chr1_4:5385113-5385132 | Msa0145680:CDS | 35.0% | |
| !!! | GGCATTTTTTTTGGTGTTGG+AGG | - | chr1_4:5384214-5384233 | None:intergenic | 40.0% |
| TGGTGAGTTGTAGAATTGAG+GGG | - | chr1_4:5384280-5384299 | None:intergenic | 40.0% | |
| TGACACATATATCTGCTCTG+AGG | + | chr1_4:5384347-5384366 | Msa0145680:CDS | 40.0% | |
| TGTCTAATGTCATTGCCACA+TGG | - | chr1_4:5384380-5384399 | None:intergenic | 40.0% | |
| AACATATATCCGAGGTTCCA+TGG | + | chr1_4:5384401-5384420 | Msa0145680:CDS | 40.0% | |
| TTTGTGGACATGATGAGTGT+TGG | - | chr1_4:5384446-5384465 | None:intergenic | 40.0% | |
| !! | ATCAAGTGCTGATCGAATTG+AGG | - | chr1_4:5384598-5384617 | None:intergenic | 40.0% |
| ACCCCGGTATTAAAGTAACA+AGG | - | chr1_4:5384864-5384883 | None:intergenic | 40.0% | |
| TTGTTCCTGTGGATCATAGA+TGG | + | chr1_4:5385021-5385040 | Msa0145680:CDS | 40.0% | |
| TGATTCCATCTATGATCCAC+AGG | - | chr1_4:5385029-5385048 | None:intergenic | 40.0% | |
| AGATGGAATCAACATGGTCT+TGG | + | chr1_4:5385038-5385057 | Msa0145680:CDS | 40.0% | |
| !!! | CTTGGTGGTGATAATTTTCG+AGG | + | chr1_4:5385056-5385075 | Msa0145680:CDS | 40.0% |
| GTCCAGTGAGTTTATTGCAT+TGG | + | chr1_4:5385102-5385121 | Msa0145680:CDS | 40.0% | |
| CTCCAATGCAATAAACTCAC+TGG | - | chr1_4:5385107-5385126 | None:intergenic | 40.0% | |
| GTGAGTTTATTGCATTGGAG+TGG | + | chr1_4:5385107-5385126 | Msa0145680:CDS | 40.0% | |
| GAGTGGAAAAGGTAAACCAT+GGG | + | chr1_4:5385124-5385143 | Msa0145680:CDS | 40.0% | |
| TGCTAATAGACCTTGTCCTT+TGG | + | chr1_4:5385157-5385176 | Msa0145680:CDS | 40.0% | |
| TTGTCCTTTGGATGCTCTTT+GGG | + | chr1_4:5385169-5385188 | Msa0145680:CDS | 40.0% | |
| GGTGTCTGCAAAAGATCATA+AGG | - | chr1_4:5385197-5385216 | None:intergenic | 40.0% | |
| !!! | GGCATTTTTTTTGGTGTTGG+AGG | - | chr1_4:5384214-5384233 | None:intergenic | 40.0% |
| TGGTGAGTTGTAGAATTGAG+GGG | - | chr1_4:5384280-5384299 | None:intergenic | 40.0% | |
| TGACACATATATCTGCTCTG+AGG | + | chr1_4:5384347-5384366 | Msa0145680:CDS | 40.0% | |
| TGTCTAATGTCATTGCCACA+TGG | - | chr1_4:5384380-5384399 | None:intergenic | 40.0% | |
| AACATATATCCGAGGTTCCA+TGG | + | chr1_4:5384401-5384420 | Msa0145680:CDS | 40.0% | |
| TTTGTGGACATGATGAGTGT+TGG | - | chr1_4:5384446-5384465 | None:intergenic | 40.0% | |
| !! | ATCAAGTGCTGATCGAATTG+AGG | - | chr1_4:5384598-5384617 | None:intergenic | 40.0% |
| ACCCCGGTATTAAAGTAACA+AGG | - | chr1_4:5384864-5384883 | None:intergenic | 40.0% | |
| TTGTTCCTGTGGATCATAGA+TGG | + | chr1_4:5385021-5385040 | Msa0145680:CDS | 40.0% | |
| TGATTCCATCTATGATCCAC+AGG | - | chr1_4:5385029-5385048 | None:intergenic | 40.0% | |
| AGATGGAATCAACATGGTCT+TGG | + | chr1_4:5385038-5385057 | Msa0145680:CDS | 40.0% | |
| !!! | CTTGGTGGTGATAATTTTCG+AGG | + | chr1_4:5385056-5385075 | Msa0145680:CDS | 40.0% |
| GTCCAGTGAGTTTATTGCAT+TGG | + | chr1_4:5385102-5385121 | Msa0145680:CDS | 40.0% | |
| CTCCAATGCAATAAACTCAC+TGG | - | chr1_4:5385107-5385126 | None:intergenic | 40.0% | |
| GTGAGTTTATTGCATTGGAG+TGG | + | chr1_4:5385107-5385126 | Msa0145680:CDS | 40.0% | |
| GAGTGGAAAAGGTAAACCAT+GGG | + | chr1_4:5385124-5385143 | Msa0145680:CDS | 40.0% | |
| TGCTAATAGACCTTGTCCTT+TGG | + | chr1_4:5385157-5385176 | Msa0145680:CDS | 40.0% | |
| TTGTCCTTTGGATGCTCTTT+GGG | + | chr1_4:5385169-5385188 | Msa0145680:CDS | 40.0% | |
| GGTGTCTGCAAAAGATCATA+AGG | - | chr1_4:5385197-5385216 | None:intergenic | 40.0% | |
| ! | TCACTGATGGAGGCACAATT+TGG | - | chr1_4:5384300-5384319 | None:intergenic | 45.0% |
| !! | TTCTTCTGGTTCACTGATGG+AGG | - | chr1_4:5384310-5384329 | None:intergenic | 45.0% |
| !! | GTCTTCTTCTGGTTCACTGA+TGG | - | chr1_4:5384313-5384332 | None:intergenic | 45.0% |
| !! | TCATGTTCGGTGTCTTCTTC+TGG | - | chr1_4:5384324-5384343 | None:intergenic | 45.0% |
| !! | AAATGCAGTTTTGGCAGCAC+CGG | + | chr1_4:5384752-5384771 | Msa0145680:CDS | 45.0% |
| !! | GATGGGTTGGACCAAAATGT+TGG | - | chr1_4:5384813-5384832 | None:intergenic | 45.0% |
| GATCTAGAAAAATGGCGCGA+CGG | + | chr1_4:5384894-5384913 | Msa0145680:CDS | 45.0% | |
| ! | TGGAATCAACATGGTCTTGG+TGG | + | chr1_4:5385041-5385060 | Msa0145680:CDS | 45.0% |
| CTTTGTCGAGATCTTCATCC+AGG | + | chr1_4:5385080-5385099 | Msa0145680:CDS | 45.0% | |
| TGCAATAAACTCACTGGACC+TGG | - | chr1_4:5385101-5385120 | None:intergenic | 45.0% | |
| GGAGTGGAAAAGGTAAACCA+TGG | + | chr1_4:5385123-5385142 | Msa0145680:CDS | 45.0% | |
| AGGTAAACCATGGGTGAGAT+TGG | + | chr1_4:5385133-5385152 | Msa0145680:CDS | 45.0% | |
| TTAGCATCCAATCTCACCCA+TGG | - | chr1_4:5385143-5385162 | None:intergenic | 45.0% | |
| !! | CAAAGAGCATCCAAAGGACA+AGG | - | chr1_4:5385170-5385189 | None:intergenic | 45.0% |
| CTTGTCCTTTGGATGCTCTT+TGG | + | chr1_4:5385168-5385187 | Msa0145680:CDS | 45.0% | |
| ! | TCACTGATGGAGGCACAATT+TGG | - | chr1_4:5384300-5384319 | None:intergenic | 45.0% |
| !! | TTCTTCTGGTTCACTGATGG+AGG | - | chr1_4:5384310-5384329 | None:intergenic | 45.0% |
| !! | GTCTTCTTCTGGTTCACTGA+TGG | - | chr1_4:5384313-5384332 | None:intergenic | 45.0% |
| !! | TCATGTTCGGTGTCTTCTTC+TGG | - | chr1_4:5384324-5384343 | None:intergenic | 45.0% |
| !! | AAATGCAGTTTTGGCAGCAC+CGG | + | chr1_4:5384752-5384771 | Msa0145680:CDS | 45.0% |
| !! | GATGGGTTGGACCAAAATGT+TGG | - | chr1_4:5384813-5384832 | None:intergenic | 45.0% |
| GATCTAGAAAAATGGCGCGA+CGG | + | chr1_4:5384894-5384913 | Msa0145680:CDS | 45.0% | |
| ! | TGGAATCAACATGGTCTTGG+TGG | + | chr1_4:5385041-5385060 | Msa0145680:CDS | 45.0% |
| CTTTGTCGAGATCTTCATCC+AGG | + | chr1_4:5385080-5385099 | Msa0145680:CDS | 45.0% | |
| TGCAATAAACTCACTGGACC+TGG | - | chr1_4:5385101-5385120 | None:intergenic | 45.0% | |
| GGAGTGGAAAAGGTAAACCA+TGG | + | chr1_4:5385123-5385142 | Msa0145680:CDS | 45.0% | |
| AGGTAAACCATGGGTGAGAT+TGG | + | chr1_4:5385133-5385152 | Msa0145680:CDS | 45.0% | |
| TTAGCATCCAATCTCACCCA+TGG | - | chr1_4:5385143-5385162 | None:intergenic | 45.0% | |
| !! | CAAAGAGCATCCAAAGGACA+AGG | - | chr1_4:5385170-5385189 | None:intergenic | 45.0% |
| CTTGTCCTTTGGATGCTCTT+TGG | + | chr1_4:5385168-5385187 | Msa0145680:CDS | 45.0% | |
| !! | ATGAGTGTTGGAGGACAGAG+AGG | - | chr1_4:5384434-5384453 | None:intergenic | 50.0% |
| !! | GTGGACATGATGAGTGTTGG+AGG | - | chr1_4:5384443-5384462 | None:intergenic | 50.0% |
| TGCAGGGGAAATTGTTCCTG+TGG | + | chr1_4:5385010-5385029 | Msa0145680:CDS | 50.0% | |
| !! | ATGAGTGTTGGAGGACAGAG+AGG | - | chr1_4:5384434-5384453 | None:intergenic | 50.0% |
| !! | GTGGACATGATGAGTGTTGG+AGG | - | chr1_4:5384443-5384462 | None:intergenic | 50.0% |
| TGCAGGGGAAATTGTTCCTG+TGG | + | chr1_4:5385010-5385029 | Msa0145680:CDS | 50.0% | |
| ! | CTCTGAGGAAGCAGTCCATG+TGG | + | chr1_4:5384362-5384381 | Msa0145680:CDS | 55.0% |
| GGATTGCAGCCATGGAACCT+CGG | - | chr1_4:5384413-5384432 | None:intergenic | 55.0% | |
| GACAGAGAGGATTGCAGCCA+TGG | - | chr1_4:5384421-5384440 | None:intergenic | 55.0% | |
| !! | GGTGCCCAAAGAGCATCCAA+AGG | - | chr1_4:5385176-5385195 | None:intergenic | 55.0% |
| ! | CTCTGAGGAAGCAGTCCATG+TGG | + | chr1_4:5384362-5384381 | Msa0145680:CDS | 55.0% |
| GGATTGCAGCCATGGAACCT+CGG | - | chr1_4:5384413-5384432 | None:intergenic | 55.0% | |
| GACAGAGAGGATTGCAGCCA+TGG | - | chr1_4:5384421-5384440 | None:intergenic | 55.0% | |
| !! | GGTGCCCAAAGAGCATCCAA+AGG | - | chr1_4:5385176-5385195 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 5384132 | 5385235 | 5384132 | ID=Msa0145680;Name=Msa0145680 |
| chr1_4 | mRNA | 5384132 | 5385235 | 5384132 | ID=Msa0145680-mRNA-1;Parent=Msa0145680;Name=Msa0145680-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|367 |
| chr1_4 | exon | 5384132 | 5385235 | 5384132 | ID=Msa0145680-mRNA-1:exon:2196;Parent=Msa0145680-mRNA-1 |
| chr1_4 | CDS | 5384132 | 5385235 | 5384132 | ID=Msa0145680-mRNA-1:cds;Parent=Msa0145680-mRNA-1 |
| Gene Sequence |
| Protein sequence |
