AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0112810

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0112810 MtrunA17_Chr1g0203721 40.469 682 388 5 3 680 23 690 0.0 549
Msa0112810 MtrunA17_Chr6g0458391 44.237 590 306 5 28 613 195 765 0.0 544
Msa0112810 MtrunA17_Chr6g0458391 51.938 129 60 2 54 181 89 216 2.79e-33 137
Msa0112810 MtrunA17_Chr3g0082121 42.035 678 358 9 6 679 10 656 4.84e-175 521
Msa0112810 MtrunA17_Chr2g0324011 42.196 583 330 4 53 631 7 586 1.26e-160 480
Msa0112810 MtrunA17_Chr5g0448761 38.194 576 344 6 53 618 57 630 5.32e-132 412
Msa0112810 MtrunA17_Chr8g0363841 34.446 659 411 10 58 703 19 669 7.62e-123 385
Msa0112810 MtrunA17_Chr1g0202341 33.627 568 358 6 56 613 51 609 2.59e-111 355
Msa0112810 MtrunA17_Chr2g0287651 32.325 628 385 13 47 657 69 673 1.00e-99 330
Msa0112810 MtrunA17_Chr5g0441581 33.010 618 390 10 56 665 32 633 7.86e-99 322
Msa0112810 MtrunA17_Chr1g0164591 48.701 308 149 2 141 448 10 308 1.24e-98 310
Msa0112810 MtrunA17_Chr1g0207551 31.537 631 418 7 18 647 1 618 1.43e-98 325
Msa0112810 MtrunA17_Chr2g0329031 31.503 692 430 13 56 730 14 678 1.68e-96 317
Msa0112810 MtrunA17_Chr5g0440451 32.519 655 398 11 56 687 43 676 1.13e-95 320
Msa0112810 MtrunA17_Chr3g0080351 32.154 622 377 8 53 659 73 664 1.58e-95 317
Msa0112810 MtrunA17_Chr2g0287061 33.803 568 333 10 54 619 181 707 1.79e-93 311
Msa0112810 MtrunA17_Chr2g0287061 30.994 171 93 5 56 226 29 174 9.09e-11 65.9
Msa0112810 MtrunA17_Chr1g0203051 32.058 549 351 9 62 600 85 621 4.55e-91 300
Msa0112810 MtrunA17_Chr5g0448511 34.653 404 262 2 217 619 1 403 2.34e-87 288
Msa0112810 MtrunA17_Chr3g0118611 37.470 419 255 4 229 645 118 531 1.62e-84 286
Msa0112810 MtrunA17_Chr7g0258861 48.601 286 140 3 53 333 7 290 4.07e-82 266
Msa0112810 MtrunA17_Chr2g0296781 32.192 584 357 14 60 620 1 568 6.36e-82 278
Msa0112810 MtrunA17_Chr1g0198761 30.135 594 392 9 51 626 42 630 7.32e-76 262
Msa0112810 MtrunA17_Chr6g0477261 32.411 506 290 10 179 656 5 486 1.00e-75 259
Msa0112810 MtrunA17_Chr1g0196541 27.822 629 405 11 60 654 1 614 6.83e-70 245
Msa0112810 MtrunA17_Chr2g0276841 29.079 619 413 11 28 631 41 648 8.50e-68 238
Msa0112810 MtrunA17_Chr2g0291581 28.055 581 379 10 56 620 71 628 2.12e-64 229
Msa0112810 MtrunA17_Chr2g0291591 29.959 484 330 5 46 527 54 530 1.16e-63 224
Msa0112810 MtrunA17_Chr2g0294841 28.621 580 372 15 53 608 42 603 1.87e-61 222
Msa0112810 MtrunA17_Chr2g0290391 27.094 609 401 14 35 619 29 618 7.66e-58 210
Msa0112810 MtrunA17_Chr5g0431001 30.913 427 280 7 51 464 56 480 4.98e-56 201
Msa0112810 MtrunA17_Chr1g0149131 52.679 112 53 0 334 445 1 112 7.31e-35 129
Msa0112810 MtrunA17_Chr2g0308841 23.767 223 168 2 392 612 4 226 1.61e-19 89.4
Msa0112810 MtrunA17_Chr7g0233911 36.552 145 81 5 56 192 34 175 3.63e-18 84.3
Msa0112810 MtrunA17_Chr4g0033611 34.524 168 91 6 56 211 76 236 1.61e-17 83.2
Msa0112810 MtrunA17_Chr2g0329421 39.130 115 64 4 50 162 23 133 1.29e-16 79.7
Msa0112810 MtrunA17_Chr7g0238821 39.450 109 60 3 60 165 1 106 3.73e-15 72.4
Msa0112810 MtrunA17_Chr5g0401121 43.810 105 55 3 55 156 55 158 4.38e-15 73.9
Msa0112810 MtrunA17_Chr2g0329361 37.069 116 60 3 52 159 57 167 6.57e-15 75.5
Msa0112810 MtrunA17_Chr3g0078041 33.742 163 98 6 19 177 18 174 1.94e-14 73.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0112810 AT4G38180.1 37.713 586 357 4 41 620 58 641 1.37e-134 420
Msa0112810 AT4G15090.1 33.438 637 397 10 44 667 36 658 5.33e-106 345
Msa0112810 AT4G15090.5 33.438 637 397 10 44 667 36 658 5.33e-106 345
Msa0112810 AT4G15090.3 33.438 637 397 10 44 667 36 658 5.33e-106 345
Msa0112810 AT4G15090.2 33.438 637 397 10 44 667 36 658 5.33e-106 345
Msa0112810 AT4G15090.4 33.438 637 397 10 44 667 36 658 5.33e-106 345
Msa0112810 AT3G06250.2 31.861 634 383 10 3 634 139 725 7.55e-104 338
Msa0112810 AT3G06250.2 33.553 152 74 5 46 185 21 157 8.99e-14 75.9
Msa0112810 AT3G06250.1 31.861 634 383 10 3 634 139 725 7.55e-104 338
Msa0112810 AT3G06250.1 33.553 152 74 5 46 185 21 157 8.99e-14 75.9
Msa0112810 AT3G06250.3 31.861 634 383 10 3 634 139 725 7.55e-104 338
Msa0112810 AT3G06250.3 33.553 152 74 5 46 185 21 157 8.99e-14 75.9
Msa0112810 AT2G27110.2 31.385 650 405 11 37 679 26 641 3.01e-94 315
Msa0112810 AT2G27110.1 31.385 650 405 11 37 679 26 641 3.01e-94 315
Msa0112810 AT5G18960.2 31.904 583 349 10 56 634 211 749 2.49e-92 308
Msa0112810 AT5G18960.2 37.956 137 64 4 46 173 33 157 8.76e-16 82.4
Msa0112810 AT5G18960.1 31.904 583 349 10 56 634 211 749 2.49e-92 308
Msa0112810 AT5G18960.1 37.956 137 64 4 46 173 33 157 8.76e-16 82.4
Msa0112810 AT3G22170.2 30.323 620 387 7 53 657 67 656 6.28e-91 305
Msa0112810 AT3G22170.1 30.323 620 387 7 53 657 67 656 6.28e-91 305
Msa0112810 AT1G76320.3 31.553 599 393 7 60 657 1 583 2.37e-90 300
Msa0112810 AT1G76320.2 31.553 599 393 7 60 657 1 583 4.88e-90 300
Msa0112810 AT1G76320.1 31.553 599 393 7 60 657 1 583 5.65e-90 300
Msa0112810 AT1G76320.4 31.553 599 393 7 60 657 1 583 5.65e-90 300
Msa0112810 AT2G27110.3 34.038 473 298 6 210 679 35 496 1.17e-81 277
Msa0112810 AT4G19990.5 29.395 711 424 12 37 718 7 668 4.53e-79 271
Msa0112810 AT4G19990.3 29.395 711 424 12 37 718 7 668 5.06e-79 271
Msa0112810 AT4G19990.4 29.395 711 424 12 37 718 7 668 5.06e-79 271
Msa0112810 AT4G19990.6 29.395 711 424 12 37 718 7 668 6.25e-79 271
Msa0112810 AT4G19990.2 29.395 711 424 12 37 718 7 668 6.25e-79 271
Msa0112810 AT4G19990.7 29.395 711 424 12 37 718 21 682 6.87e-79 271
Msa0112810 AT4G38170.1 32.898 383 251 3 233 613 21 399 2.12e-74 253
Msa0112810 AT2G32250.5 29.392 609 383 6 59 667 41 602 6.05e-74 257
Msa0112810 AT2G32250.6 29.392 609 383 6 59 667 41 602 9.58e-74 258
Msa0112810 AT2G32250.1 29.392 609 383 6 59 667 41 602 9.58e-74 258
Msa0112810 AT2G32250.3 29.392 609 383 6 59 667 41 602 9.58e-74 258
Msa0112810 AT2G32250.2 29.392 609 383 6 59 667 41 602 9.65e-74 258
Msa0112810 AT2G32250.4 29.392 609 383 6 59 667 41 602 9.65e-74 258
Msa0112810 AT2G32250.8 29.276 608 383 6 60 667 1 561 5.78e-73 254
Msa0112810 AT2G32250.7 29.276 608 383 6 60 667 1 561 6.68e-73 254
Msa0112810 AT1G80010.1 29.831 590 377 13 47 613 86 661 4.28e-72 251
Msa0112810 AT4G19990.1 30.081 615 373 9 118 718 40 611 3.86e-71 248
Msa0112810 AT1G10240.2 28.231 588 389 11 46 614 35 608 1.21e-65 232
Msa0112810 AT1G10240.1 28.231 588 389 11 46 614 35 608 1.21e-65 232
Msa0112810 AT1G52520.1 29.038 582 377 14 55 620 84 645 1.22e-62 224
Msa0112810 AT5G28530.3 26.578 602 389 12 56 628 55 632 3.97e-57 208
Msa0112810 AT5G28530.2 26.578 602 389 12 56 628 55 632 3.97e-57 208
Msa0112810 AT5G28530.1 26.359 607 388 13 56 628 55 636 1.31e-56 207
Msa0112810 AT5G28530.5 21.922 593 365 17 56 628 55 569 6.52e-26 114
Msa0112810 AT5G28530.4 25.220 341 214 8 306 628 256 573 7.52e-25 110
Msa0112810 AT5G28530.4 26.776 183 124 5 56 231 55 234 8.49e-12 69.3
Msa0112810 AT3G59470.3 43.119 109 58 3 56 162 70 176 3.46e-18 85.5
Msa0112810 AT3G59470.1 43.119 109 58 3 56 162 70 176 3.46e-18 85.5
Msa0112810 AT3G59470.2 43.119 109 58 3 56 162 82 188 5.12e-18 85.5
Msa0112810 AT4G12850.4 35.714 112 68 3 45 156 2 109 3.09e-15 73.9
Msa0112810 AT4G12850.2 35.714 112 68 3 45 156 2 109 3.53e-15 73.6
Msa0112810 AT3G07500.1 40.000 105 60 2 54 156 31 134 1.39e-14 74.3
Msa0112810 AT4G12850.1 36.364 110 66 3 47 156 4 109 1.59e-14 73.2
Msa0112810 AT2G43280.1 36.765 136 78 6 54 184 20 152 3.68e-13 69.7

Find 127 sgRNAs with CRISPR-Local

Find 167 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATCTTGCATCCATTTATTT+TGG 0.162980 1_3:+28343251 None:intergenic
GAGTTGCAAAGTTGCATTTA+TGG 0.171824 1_3:-28343337 Msa0112810:CDS
ATCTAATAACAAACATCTTT+TGG 0.176504 1_3:-28343738 Msa0112810:CDS
CCTTGCTCTACCTGTATAAT+TGG 0.192215 1_3:+28342224 None:intergenic
CAATTAAGTGAGAGCTTTAA+TGG 0.201468 1_3:-28343157 Msa0112810:CDS
CATCTCTTAAGGATGTATTT+TGG 0.224916 1_3:+28342707 None:intergenic
AGAGCTTTAATGGCCGTTTA+AGG 0.266195 1_3:-28343147 Msa0112810:CDS
CATCGAGAAAGTGTGTTATT+TGG 0.271796 1_3:-28343598 Msa0112810:CDS
TAAATGATTGCTAATATCTT+TGG 0.285585 1_3:+28343879 None:intergenic
TTGAAAACATCTTGAGTAAA+AGG 0.286976 1_3:-28342493 Msa0112810:CDS
AAAATCATGTAATCTTGTTT+TGG 0.288784 1_3:-28342921 Msa0112810:CDS
TACGACATGGTTACAAATAT+AGG 0.291941 1_3:-28344604 Msa0112810:exon
CTTCAATGCATCTGAAGTTA+TGG 0.292580 1_3:-28342381 Msa0112810:CDS
GAATATGATGTGTGCTTGTT+TGG 0.292966 1_3:-28342869 Msa0112810:CDS
GAAATTGCCTTTGCCATTGC+AGG 0.294524 1_3:+28343466 None:intergenic
CATCCATCTTGTGAGGTTCT+TGG 0.298227 1_3:-28344565 Msa0112810:CDS
ACGACATGGTTACAAATATA+GGG 0.303330 1_3:-28344603 Msa0112810:exon
ATAATCTTCGCCAAAATAAA+TGG 0.309322 1_3:-28343261 Msa0112810:CDS
CGACCATTTGCTCCGTTTGT+TGG 0.314036 1_3:-28343631 Msa0112810:CDS
AATATGATGTGTGCTTGTTT+GGG 0.314379 1_3:-28342868 Msa0112810:CDS
GGGTTGCAAGTTCATGGTTA+TGG 0.320894 1_3:+28344055 None:intergenic
TGTTCAGCGCATTTGGTCAT+TGG 0.324780 1_3:-28344123 Msa0112810:CDS
TCAATGTGACTTGTTGAAAA+TGG 0.330148 1_3:+28341935 None:intergenic
GTTGTGGATTATGCTTATTT+TGG 0.330790 1_3:-28343700 Msa0112810:CDS
ATCCATCTTGTGAGGTTCTT+GGG 0.331730 1_3:-28344564 Msa0112810:CDS
ATTGATTGGAAGAAGACATT+TGG 0.334700 1_3:-28341917 Msa0112810:CDS
AACTGGTTGTTCAGCGCATT+TGG 0.336400 1_3:-28344130 Msa0112810:CDS
GCTAGATGATATGCGATATA+AGG 0.344976 1_3:-28343068 Msa0112810:CDS
TTTCAACAAGTCACATTGAT+TGG 0.348376 1_3:-28341931 Msa0112810:CDS
TATTCAATGATGGCATCTTC+TGG 0.352708 1_3:+28343020 None:intergenic
AGTTGTCTTAAATCGCTCTA+AGG 0.358984 1_3:-28342615 Msa0112810:CDS
CATTCTTAGTCCATCTCTTA+AGG 0.363154 1_3:+28342696 None:intergenic
TCAAATTCCATACCAACATT+TGG 0.374980 1_3:+28344342 None:intergenic
TTCAATGCATCTGAAGTTAT+GGG 0.383526 1_3:-28342380 Msa0112810:CDS
AATATGTACGCAGGCTTTGT+TGG 0.387200 1_3:-28344291 Msa0112810:CDS
TCTACCTGTATAATTGGAAT+TGG 0.389412 1_3:+28342230 None:intergenic
CTATTCGAGTACTTAATCAT+TGG 0.395437 1_3:-28342748 Msa0112810:CDS
TTTCTCTCTAGACAACTCTT+AGG 0.396099 1_3:+28342317 None:intergenic
ACTTTGATCTTCAGAGTTGA+AGG 0.396762 1_3:+28342823 None:intergenic
TATTGTGTTGAAAGGTAGAT+TGG 0.421876 1_3:+28344625 None:intergenic
TTGATTGGAAGAAGACATTT+GGG 0.424679 1_3:-28341916 Msa0112810:CDS
GGATGTGTTCTTGACAATAA+AGG 0.432868 1_3:-28342665 Msa0112810:CDS
TTCTAAAAGAATGAAGGAAA+TGG 0.436948 1_3:-28343854 Msa0112810:CDS
TGGTAACTTATGCCTACTCC+TGG 0.442738 1_3:+28344032 None:intergenic
ACCATGATCTGCACTCTGTA+TGG 0.447129 1_3:+28342466 None:intergenic
TTTAAATTCTAAAAGAATGA+AGG 0.449329 1_3:-28343860 Msa0112810:CDS
TCAAGCTACTGAAGTTGAAA+TGG 0.456331 1_3:-28343986 Msa0112810:CDS
ATTGTGTTGAAAGGTAGATT+GGG 0.456337 1_3:+28344626 None:intergenic
ATACTGAAGATCATGCATAT+AGG 0.460388 1_3:-28344320 Msa0112810:CDS
TCTGCCACCTCGGATTCTAA+TGG 0.462986 1_3:-28344505 Msa0112810:intron
CATTTATGGTTTCGAGTATG+AGG 0.463305 1_3:-28343323 Msa0112810:CDS
GGCTGATGCTAAAATGGTTG+TGG 0.464524 1_3:-28343716 Msa0112810:CDS
CATGCCAATTCCAATTATAC+AGG 0.465016 1_3:-28342234 Msa0112810:CDS
GTTGAAATGGCGAACCGGTC+CGG 0.468344 1_3:-28343973 Msa0112810:CDS
CGATTTAAGACAACTAACTT+AGG 0.473995 1_3:+28342623 None:intergenic
AATCCAACAAACGGAGCAAA+TGG 0.481640 1_3:+28343628 None:intergenic
GCTTCATGTAAAGCCTTAAA+CGG 0.485722 1_3:+28343134 None:intergenic
TGTCAAGATACACTAGCAAT+TGG 0.487500 1_3:-28342152 Msa0112810:CDS
AATTAGTTTCTGACGTATGC+CGG 0.490277 1_3:+28343954 None:intergenic
CTGAAGTTGAAATGGCGAAC+CGG 0.490381 1_3:-28343978 Msa0112810:CDS
ATTCTTATTAGTGCGATAAG+TGG 0.490993 1_3:+28343657 None:intergenic
GTTTCTGACGTATGCCGGAC+CGG 0.493182 1_3:+28343959 None:intergenic
TGCGGTAGCAATATCATGTA+AGG 0.495096 1_3:-28342579 Msa0112810:CDS
GATGGTGTATCCAGAGGAAA+AGG 0.496843 1_3:-28342344 Msa0112810:CDS
CATATCATCGTTTATGCTTG+TGG 0.499690 1_3:-28343426 Msa0112810:CDS
CATTGAAAATGATGTAACCT+TGG 0.502984 1_3:-28344376 Msa0112810:CDS
GGTAACTTATGCCTACTCCT+GGG 0.504717 1_3:+28344033 None:intergenic
CTCGAATAGCATGGCAGCAA+AGG 0.509751 1_3:+28342762 None:intergenic
TGATCTGTTAAAATTGTCAT+CGG 0.512471 1_3:+28343493 None:intergenic
TATAGTTCCAAATGTTGGTA+TGG 0.518391 1_3:-28344349 Msa0112810:CDS
GTAACTTATGCCTACTCCTG+GGG 0.521725 1_3:+28344034 None:intergenic
GACGATATAGTTCCAAATGT+TGG 0.524084 1_3:-28344354 Msa0112810:CDS
ACTCGCAAAGATATCAGAAC+TGG 0.524113 1_3:-28344147 Msa0112810:CDS
CAAAATACATCCTTAAGAGA+TGG 0.525845 1_3:-28342706 Msa0112810:CDS
AGACAGCTGAATCATTTAAG+TGG 0.526677 1_3:-28343555 Msa0112810:CDS
CAAGAACCTCACAAGATGGA+TGG 0.528873 1_3:+28344566 None:intergenic
AAGAGAATAAAAGATGAAGA+AGG 0.531444 1_3:-28344177 Msa0112810:CDS
TTCATTAGTCGACAAGTTGG+AGG 0.532160 1_3:-28343925 Msa0112810:CDS
TGATGATTAAATCCAACAAA+CGG 0.536884 1_3:+28343619 None:intergenic
ATGATGTTCATATTCAATGA+TGG 0.538522 1_3:+28343010 None:intergenic
CTCCCAAGAACCTCACAAGA+TGG 0.539182 1_3:+28344562 None:intergenic
TGTGCTTGTTTGGGGCTATG+AGG 0.552398 1_3:-28342859 Msa0112810:CDS
TTGTGTTGAAAGGTAGATTG+GGG 0.557908 1_3:+28344627 None:intergenic
TAAAAGAATGAAGGAAATGG+AGG 0.559231 1_3:-28343851 Msa0112810:CDS
TTTCTTATGCAAATAAACAA+TGG 0.564955 1_3:+28341828 None:intergenic
AGAATCCAATGGAAAATATG+TGG 0.565466 1_3:-28344097 Msa0112810:CDS
GAAGGAAATGGAGGAAGGTG+AGG 0.568120 1_3:-28343842 Msa0112810:CDS
AAACAAAAGTAAATTAGATG+AGG 0.568540 1_3:-28344244 Msa0112810:CDS
TCCATACAGAGTGCAGATCA+TGG 0.570905 1_3:-28342467 Msa0112810:CDS
AATTCTAACACATTAAAGGT+AGG 0.573003 1_3:+28343112 None:intergenic
CCATGTCGTATTGTGTTGAA+AGG 0.573143 1_3:+28344617 None:intergenic
CAATACAACTTCTGCCACCT+CGG 0.585992 1_3:-28344515 Msa0112810:CDS
ATTTGGAACTATATCGTCCA+AGG 0.586186 1_3:+28344359 None:intergenic
GAGTTCATTAGTCGACAAGT+TGG 0.587463 1_3:-28343928 Msa0112810:CDS
AATGGCAAAGGCAATTTCAG+AGG 0.588293 1_3:-28343461 Msa0112810:CDS
AATTGGTATTAATGCAACAC+AGG 0.588865 1_3:-28342135 Msa0112810:intron
TCAAGATCCTGCAATGGCAA+AGG 0.589517 1_3:-28343473 Msa0112810:CDS
AGAATGAAGGAAATGGAGGA+AGG 0.591377 1_3:-28343847 Msa0112810:CDS
CATAAACGATGATATGACTC+GGG 0.591415 1_3:+28343433 None:intergenic
AAGAACCTCACAAGATGGAT+GGG 0.595753 1_3:+28344567 None:intergenic
GTCATTGGTCGAGAATCCAA+TGG 0.597725 1_3:-28344108 Msa0112810:CDS
TCCTACCCATCCATCTTGTG+AGG 0.599686 1_3:-28344572 Msa0112810:CDS
TAATTGTGTTGTTGTAGCAC+CGG 0.601043 1_3:+28343174 None:intergenic
AACAGATCAAGATCCTGCAA+TGG 0.602312 1_3:-28343479 Msa0112810:CDS
GCATAAACGATGATATGACT+CGG 0.604014 1_3:+28343432 None:intergenic
CCTTTCAACACAATACGACA+TGG 0.604312 1_3:-28344617 Msa0112810:exon
AAAATAATTAGATCGCTGAA+AGG 0.605255 1_3:+28343366 None:intergenic
CGACATGGTTACAAATATAG+GGG 0.608427 1_3:-28344602 Msa0112810:exon
TCAATTACCATTAGAATCCG+AGG 0.608459 1_3:+28344498 None:intergenic
TCATTAGTCGACAAGTTGGA+GGG 0.610088 1_3:-28343924 Msa0112810:CDS
GTTGGAGGGAGAGAAAATGT+TGG 0.613113 1_3:-28343910 Msa0112810:CDS
ACCTCACAAGATGGATGGGT+AGG 0.620207 1_3:+28344571 None:intergenic
ATATGATGTGTGCTTGTTTG+GGG 0.629556 1_3:-28342867 Msa0112810:CDS
TGGACTAAGAATGCTCGAAG+TGG 0.632229 1_3:-28342686 Msa0112810:CDS
CCAATTATACAGGTAGAGCA+AGG 0.633531 1_3:-28342224 Msa0112810:CDS
ATAATTGGAATTGGCATGGT+GGG 0.635857 1_3:+28342239 None:intergenic
CTGTATAATTGGAATTGGCA+TGG 0.648417 1_3:+28342235 None:intergenic
TCAATGCATCTGAAGTTATG+GGG 0.650769 1_3:-28342379 Msa0112810:CDS
TTCAGAGATAACGAATGCAG+AGG 0.657872 1_3:-28341966 Msa0112810:CDS
GATTAAGTACTCGAATAGCA+TGG 0.658504 1_3:+28342753 None:intergenic
TAACTTATGCCTACTCCTGG+GGG 0.660240 1_3:+28344035 None:intergenic
AGATGATATGCGATATAAGG+AGG 0.661490 1_3:-28343065 Msa0112810:CDS
AAGAAGGATGGTGTATCCAG+AGG 0.663396 1_3:-28342350 Msa0112810:CDS
TATAATTGGAATTGGCATGG+TGG 0.708131 1_3:+28342238 None:intergenic
TAAGGATTTGTGTCGCACTG+CGG 0.718952 1_3:-28342597 Msa0112810:CDS
TTATTGCTAGAAGAAAGTAG+TGG 0.737366 1_3:+28341794 None:intergenic
ATTACCATTAGAATCCGAGG+TGG 0.754496 1_3:+28344501 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATTTTCTTGTTTTAAAGA+AGG - chr1_3:28342265-28342284 Msa0112810:CDS 15.0%
!!! TTTAAATTCTAAAAGAATGA+AGG - chr1_3:28342609-28342628 Msa0112810:CDS 15.0%
!! TCTTTAACAAAAATGAAAAA+TGG - chr1_3:28343241-28343260 Msa0112810:CDS 15.0%
!! CTTTAACAAAAATGAAAAAT+GGG - chr1_3:28343242-28343261 Msa0112810:CDS 15.0%
!!! AATAAAAATTGATTTCAACA+TGG + chr1_3:28344433-28344452 None:intergenic 15.0%
!! AAACAAAAGTAAATTAGATG+AGG - chr1_3:28342225-28342244 Msa0112810:CDS 20.0%
!! TAAATGATTGCTAATATCTT+TGG + chr1_3:28342593-28342612 None:intergenic 20.0%
!!! ATCTAATAACAAACATCTTT+TGG - chr1_3:28342731-28342750 Msa0112810:CDS 20.0%
!!! TCTAATAACAAACATCTTTT+GGG - chr1_3:28342732-28342751 Msa0112810:CDS 20.0%
!! GAAAAATTCTAACACATTAA+AGG + chr1_3:28343364-28343383 None:intergenic 20.0%
!!! AAAATCATGTAATCTTGTTT+TGG - chr1_3:28343548-28343567 Msa0112810:CDS 20.0%
!! GTCATATTTAGCTAAAAAAT+TGG - chr1_3:28343935-28343954 Msa0112810:CDS 20.0%
!! ATATTTAGCTAAAAAATTGG+TGG - chr1_3:28343938-28343957 Msa0112810:CDS 20.0%
!! TTTCTTATGCAAATAAACAA+TGG + chr1_3:28344644-28344663 None:intergenic 20.0%
!!! TTACTGATAGCTTTAATATG+TGG - chr1_3:28341998-28342017 Msa0112810:CDS 25.0%
!! TGTTTATTTCTCCTTTGAAT+TGG - chr1_3:28342029-28342048 Msa0112810:intron 25.0%
! CTATATTAAGACCAATTCAA+AGG + chr1_3:28342043-28342062 None:intergenic 25.0%
! AAGAGAATAAAAGATGAAGA+AGG - chr1_3:28342292-28342311 Msa0112810:CDS 25.0%
!! TTCTAAAAGAATGAAGGAAA+TGG - chr1_3:28342615-28342634 Msa0112810:CDS 25.0%
! TGATGATTAAATCCAACAAA+CGG + chr1_3:28342853-28342872 None:intergenic 25.0%
! TGATCTGTTAAAATTGTCAT+CGG + chr1_3:28342979-28342998 None:intergenic 25.0%
! AAAATAATTAGATCGCTGAA+AGG + chr1_3:28343106-28343125 None:intergenic 25.0%
! ATAATCTTCGCCAAAATAAA+TGG - chr1_3:28343208-28343227 Msa0112810:CDS 25.0%
!! AATCTTGCATCCATTTATTT+TGG + chr1_3:28343221-28343240 None:intergenic 25.0%
! AATTCTAACACATTAAAGGT+AGG + chr1_3:28343360-28343379 None:intergenic 25.0%
! ATGATGTTCATATTCAATGA+TGG + chr1_3:28343462-28343481 None:intergenic 25.0%
!!! TGTCAACTTTTTCAATTTGT+TGG - chr1_3:28343681-28343700 Msa0112810:CDS 25.0%
! TTGAAAACATCTTGAGTAAA+AGG - chr1_3:28343976-28343995 Msa0112810:CDS 25.0%
ATTGTGTTGAAAGGTAGATT+GGG + chr1_3:28341846-28341865 None:intergenic 30.0%
TATTGTGTTGAAAGGTAGAT+TGG + chr1_3:28341847-28341866 None:intergenic 30.0%
TACGACATGGTTACAAATAT+AGG - chr1_3:28341865-28341884 Msa0112810:three_prime_UTR 30.0%
ACGACATGGTTACAAATATA+GGG - chr1_3:28341866-28341885 Msa0112810:three_prime_UTR 30.0%
! CTCTTTTACAGTGAAATTCA+AGG - chr1_3:28342066-28342085 Msa0112810:intron 30.0%
CATTGAAAATGATGTAACCT+TGG - chr1_3:28342093-28342112 Msa0112810:intron 30.0%
TATAGTTCCAAATGTTGGTA+TGG - chr1_3:28342120-28342139 Msa0112810:intron 30.0%
TCAAATTCCATACCAACATT+TGG + chr1_3:28342130-28342149 None:intergenic 30.0%
ATACTGAAGATCATGCATAT+AGG - chr1_3:28342149-28342168 Msa0112810:CDS 30.0%
!! AGGTTTTATAATATGTACGC+AGG - chr1_3:28342169-28342188 Msa0112810:CDS 30.0%
!! GTTTTAGCGTTAGAAAAGAT+TGG - chr1_3:28342200-28342219 Msa0112810:CDS 30.0%
AGAATCCAATGGAAAATATG+TGG - chr1_3:28342372-28342391 Msa0112810:CDS 30.0%
! TGTAACCACATATTTTCCAT+TGG + chr1_3:28342380-28342399 None:intergenic 30.0%
! ACAGAAACTTTTCTTTGTGA+TGG + chr1_3:28342460-28342479 None:intergenic 30.0%
TAAAAGAATGAAGGAAATGG+AGG - chr1_3:28342618-28342637 Msa0112810:CDS 30.0%
!! GTTGTGGATTATGCTTATTT+TGG - chr1_3:28342769-28342788 Msa0112810:CDS 30.0%
ATTCTTATTAGTGCGATAAG+TGG + chr1_3:28342815-28342834 None:intergenic 30.0%
! ACTTTTCTTAAAGCTATGTG+TGG - chr1_3:28342946-28342965 Msa0112810:CDS 30.0%
! CAAAAATGAAAAATGGGCTT+CGG - chr1_3:28343248-28343267 Msa0112810:CDS 30.0%
! CAATTAAGTGAGAGCTTTAA+TGG - chr1_3:28343312-28343331 Msa0112810:CDS 30.0%
CGAACAAGAGAAAAAATTGT+CGG + chr1_3:28343516-28343535 None:intergenic 30.0%
!!! ACAATTTTTTCTCTTGTTCG+TGG - chr1_3:28343516-28343535 Msa0112810:CDS 30.0%
!!! CAATTTTTTCTCTTGTTCGT+GGG - chr1_3:28343517-28343536 Msa0112810:CDS 30.0%
!!! AATTTTTTCTCTTGTTCGTG+GGG - chr1_3:28343518-28343537 Msa0112810:CDS 30.0%
AATATGATGTGTGCTTGTTT+GGG - chr1_3:28343601-28343620 Msa0112810:CDS 30.0%
CTATTCGAGTACTTAATCAT+TGG - chr1_3:28343721-28343740 Msa0112810:CDS 30.0%
! CATCTCTTAAGGATGTATTT+TGG + chr1_3:28343765-28343784 None:intergenic 30.0%
CAAAATACATCCTTAAGAGA+TGG - chr1_3:28343763-28343782 Msa0112810:CDS 30.0%
! CGATTTAAGACAACTAACTT+AGG + chr1_3:28343849-28343868 None:intergenic 30.0%
GCTAAAAAATTGGTGGAAAT+TGG - chr1_3:28343945-28343964 Msa0112810:CDS 30.0%
! TTCAATGCATCTGAAGTTAT+GGG - chr1_3:28344089-28344108 Msa0112810:CDS 30.0%
AGTTATGGGGATAAAAAAGA+AGG - chr1_3:28344103-28344122 Msa0112810:CDS 30.0%
TCTACCTGTATAATTGGAAT+TGG + chr1_3:28344242-28344261 None:intergenic 30.0%
! CAGAATGTATTGTTTTCACA+TGG - chr1_3:28344293-28344312 Msa0112810:CDS 30.0%
AATTGGTATTAATGCAACAC+AGG - chr1_3:28344334-28344353 Msa0112810:CDS 30.0%
!!! TCTTTTTTGTATGTGTCAGA+AGG - chr1_3:28344452-28344471 Msa0112810:intron 30.0%
!! TCAATGTGACTTGTTGAAAA+TGG + chr1_3:28344537-28344556 None:intergenic 30.0%
TTTCAACAAGTCACATTGAT+TGG - chr1_3:28344538-28344557 Msa0112810:CDS 30.0%
ATTGATTGGAAGAAGACATT+TGG - chr1_3:28344552-28344571 Msa0112810:CDS 30.0%
TTGATTGGAAGAAGACATTT+GGG - chr1_3:28344553-28344572 Msa0112810:CDS 30.0%
TTGTGTTGAAAGGTAGATTG+GGG + chr1_3:28341845-28341864 None:intergenic 35.0%
CGACATGGTTACAAATATAG+GGG - chr1_3:28341867-28341886 Msa0112810:three_prime_UTR 35.0%
TCAATTACCATTAGAATCCG+AGG + chr1_3:28341974-28341993 None:intergenic 35.0%
! ATTTGGAACTATATCGTCCA+AGG + chr1_3:28342113-28342132 None:intergenic 35.0%
GACGATATAGTTCCAAATGT+TGG - chr1_3:28342115-28342134 Msa0112810:intron 35.0%
TCAAGCTACTGAAGTTGAAA+TGG - chr1_3:28342483-28342502 Msa0112810:CDS 35.0%
! AATTAGTTTCTGACGTATGC+CGG + chr1_3:28342518-28342537 None:intergenic 35.0%
! CATCGAGAAAGTGTGTTATT+TGG - chr1_3:28342871-28342890 Msa0112810:CDS 35.0%
AGACAGCTGAATCATTTAAG+TGG - chr1_3:28342914-28342933 Msa0112810:CDS 35.0%
CATAAACGATGATATGACTC+GGG + chr1_3:28343039-28343058 None:intergenic 35.0%
GCATAAACGATGATATGACT+CGG + chr1_3:28343040-28343059 None:intergenic 35.0%
CATATCATCGTTTATGCTTG+TGG - chr1_3:28343043-28343062 Msa0112810:CDS 35.0%
GAGTTGCAAAGTTGCATTTA+TGG - chr1_3:28343132-28343151 Msa0112810:CDS 35.0%
! CATTTATGGTTTCGAGTATG+AGG - chr1_3:28343146-28343165 Msa0112810:CDS 35.0%
! AGGATGATTTTCTGAATGCT+TGG - chr1_3:28343166-28343185 Msa0112810:CDS 35.0%
! GGATGATTTTCTGAATGCTT+GGG - chr1_3:28343167-28343186 Msa0112810:CDS 35.0%
! AAAAATGGGCTTCGGTATAT+GGG - chr1_3:28343256-28343275 Msa0112810:CDS 35.0%
! TAATTGTGTTGTTGTAGCAC+CGG + chr1_3:28343298-28343317 None:intergenic 35.0%
GCTTCATGTAAAGCCTTAAA+CGG + chr1_3:28343338-28343357 None:intergenic 35.0%
GCTAGATGATATGCGATATA+AGG - chr1_3:28343401-28343420 Msa0112810:CDS 35.0%
AGATGATATGCGATATAAGG+AGG - chr1_3:28343404-28343423 Msa0112810:CDS 35.0%
TATTCAATGATGGCATCTTC+TGG + chr1_3:28343452-28343471 None:intergenic 35.0%
GAATATGATGTGTGCTTGTT+TGG - chr1_3:28343600-28343619 Msa0112810:CDS 35.0%
ATATGATGTGTGCTTGTTTG+GGG - chr1_3:28343602-28343621 Msa0112810:CDS 35.0%
ACTTTGATCTTCAGAGTTGA+AGG + chr1_3:28343649-28343668 None:intergenic 35.0%
GATTAAGTACTCGAATAGCA+TGG + chr1_3:28343719-28343738 None:intergenic 35.0%
!! CTCTTAAGGATGTATTTTGG+AGG + chr1_3:28343762-28343781 None:intergenic 35.0%
CATTCTTAGTCCATCTCTTA+AGG + chr1_3:28343776-28343795 None:intergenic 35.0%
GGATGTGTTCTTGACAATAA+AGG - chr1_3:28343804-28343823 Msa0112810:CDS 35.0%
AGTTGTCTTAAATCGCTCTA+AGG - chr1_3:28343854-28343873 Msa0112810:CDS 35.0%
! CTTCAATGCATCTGAAGTTA+TGG - chr1_3:28344088-28344107 Msa0112810:CDS 35.0%
! TCAATGCATCTGAAGTTATG+GGG - chr1_3:28344090-28344109 Msa0112810:CDS 35.0%
ATGGGGATAAAAAAGAAGGA+TGG - chr1_3:28344107-28344126 Msa0112810:CDS 35.0%
TTTCTCTCTAGACAACTCTT+AGG + chr1_3:28344155-28344174 None:intergenic 35.0%
ATAATTGGAATTGGCATGGT+GGG + chr1_3:28344233-28344252 None:intergenic 35.0%
TATAATTGGAATTGGCATGG+TGG + chr1_3:28344234-28344253 None:intergenic 35.0%
CTGTATAATTGGAATTGGCA+TGG + chr1_3:28344237-28344256 None:intergenic 35.0%
CATGCCAATTCCAATTATAC+AGG - chr1_3:28344235-28344254 Msa0112810:CDS 35.0%
TGTCAAGATACACTAGCAAT+TGG - chr1_3:28344317-28344336 Msa0112810:CDS 35.0%
! TTTTCTATTGTGCCTGAGAG+AGG - chr1_3:28341815-28341834 Msa0112810:three_prime_UTR 40.0%
CCATGTCGTATTGTGTTGAA+AGG + chr1_3:28341855-28341874 None:intergenic 40.0%
CCTTTCAACACAATACGACA+TGG - chr1_3:28341852-28341871 Msa0112810:three_prime_UTR 40.0%
AAGAACCTCACAAGATGGAT+GGG + chr1_3:28341905-28341924 None:intergenic 40.0%
ATCCATCTTGTGAGGTTCTT+GGG - chr1_3:28341905-28341924 Msa0112810:exon 40.0%
ATTACCATTAGAATCCGAGG+TGG + chr1_3:28341971-28341990 None:intergenic 40.0%
! AATATGTACGCAGGCTTTGT+TGG - chr1_3:28342178-28342197 Msa0112810:CDS 40.0%
ACTCGCAAAGATATCAGAAC+TGG - chr1_3:28342322-28342341 Msa0112810:CDS 40.0%
GAGTTCATTAGTCGACAAGT+TGG - chr1_3:28342541-28342560 Msa0112810:CDS 40.0%
! TTCATTAGTCGACAAGTTGG+AGG - chr1_3:28342544-28342563 Msa0112810:CDS 40.0%
! TCATTAGTCGACAAGTTGGA+GGG - chr1_3:28342545-28342564 Msa0112810:CDS 40.0%
AGAATGAAGGAAATGGAGGA+AGG - chr1_3:28342622-28342641 Msa0112810:CDS 40.0%
! CTTTTGGGCTGATGCTAAAA+TGG - chr1_3:28342747-28342766 Msa0112810:CDS 40.0%
AATCCAACAAACGGAGCAAA+TGG + chr1_3:28342844-28342863 None:intergenic 40.0%
AACAGATCAAGATCCTGCAA+TGG - chr1_3:28342990-28343009 Msa0112810:CDS 40.0%
AATGGCAAAGGCAATTTCAG+AGG - chr1_3:28343008-28343027 Msa0112810:CDS 40.0%
! GAAAAATGGGCTTCGGTATA+TGG - chr1_3:28343255-28343274 Msa0112810:CDS 40.0%
! AGAGCTTTAATGGCCGTTTA+AGG - chr1_3:28343322-28343341 Msa0112810:CDS 40.0%
TGCGGTAGCAATATCATGTA+AGG - chr1_3:28343890-28343909 Msa0112810:CDS 40.0%
CCTTGCTCTACCTGTATAAT+TGG + chr1_3:28344248-28344267 None:intergenic 40.0%
CCAATTATACAGGTAGAGCA+AGG - chr1_3:28344245-28344264 Msa0112810:CDS 40.0%
TTCAGAGATAACGAATGCAG+AGG - chr1_3:28344503-28344522 Msa0112810:intron 40.0%
CAAGAACCTCACAAGATGGA+TGG + chr1_3:28341906-28341925 None:intergenic 45.0%
CATCCATCTTGTGAGGTTCT+TGG - chr1_3:28341904-28341923 Msa0112810:exon 45.0%
CAATACAACTTCTGCCACCT+CGG - chr1_3:28341954-28341973 Msa0112810:CDS 45.0%
AACTGGTTGTTCAGCGCATT+TGG - chr1_3:28342339-28342358 Msa0112810:CDS 45.0%
TGTTCAGCGCATTTGGTCAT+TGG - chr1_3:28342346-28342365 Msa0112810:CDS 45.0%
GTCATTGGTCGAGAATCCAA+TGG - chr1_3:28342361-28342380 Msa0112810:CDS 45.0%
GGGTTGCAAGTTCATGGTTA+TGG + chr1_3:28342417-28342436 None:intergenic 45.0%
TAACTTATGCCTACTCCTGG+GGG + chr1_3:28342437-28342456 None:intergenic 45.0%
GTAACTTATGCCTACTCCTG+GGG + chr1_3:28342438-28342457 None:intergenic 45.0%
GGTAACTTATGCCTACTCCT+GGG + chr1_3:28342439-28342458 None:intergenic 45.0%
TGGTAACTTATGCCTACTCC+TGG + chr1_3:28342440-28342459 None:intergenic 45.0%
CTGAAGTTGAAATGGCGAAC+CGG - chr1_3:28342491-28342510 Msa0112810:CDS 45.0%
GTTGGAGGGAGAGAAAATGT+TGG - chr1_3:28342559-28342578 Msa0112810:CDS 45.0%
GGCTGATGCTAAAATGGTTG+TGG - chr1_3:28342753-28342772 Msa0112810:CDS 45.0%
TCAAGATCCTGCAATGGCAA+AGG - chr1_3:28342996-28343015 Msa0112810:CDS 45.0%
GAAATTGCCTTTGCCATTGC+AGG + chr1_3:28343006-28343025 None:intergenic 45.0%
TGGACTAAGAATGCTCGAAG+TGG - chr1_3:28343783-28343802 Msa0112810:CDS 45.0%
TAAGGATTTGTGTCGCACTG+CGG - chr1_3:28343872-28343891 Msa0112810:CDS 45.0%
TCCATACAGAGTGCAGATCA+TGG - chr1_3:28344002-28344021 Msa0112810:CDS 45.0%
ACCATGATCTGCACTCTGTA+TGG + chr1_3:28344006-28344025 None:intergenic 45.0%
AAGAAGGATGGTGTATCCAG+AGG - chr1_3:28344119-28344138 Msa0112810:CDS 45.0%
GATGGTGTATCCAGAGGAAA+AGG - chr1_3:28344125-28344144 Msa0112810:CDS 45.0%
! CTTAGGTCTACCTTTTCCTC+TGG + chr1_3:28344138-28344157 None:intergenic 45.0%
! GATTGGGGTTTTCCTCTCTC+AGG + chr1_3:28341830-28341849 None:intergenic 50.0%
TCCTACCCATCCATCTTGTG+AGG - chr1_3:28341897-28341916 Msa0112810:exon 50.0%
ACCTCACAAGATGGATGGGT+AGG + chr1_3:28341901-28341920 None:intergenic 50.0%
CTCCCAAGAACCTCACAAGA+TGG + chr1_3:28341910-28341929 None:intergenic 50.0%
TCTGCCACCTCGGATTCTAA+TGG - chr1_3:28341964-28341983 Msa0112810:CDS 50.0%
GAAGGAAATGGAGGAAGGTG+AGG - chr1_3:28342627-28342646 Msa0112810:CDS 50.0%
CGACCATTTGCTCCGTTTGT+TGG - chr1_3:28342838-28342857 Msa0112810:CDS 50.0%
! TGTGCTTGTTTGGGGCTATG+AGG - chr1_3:28343610-28343629 Msa0112810:CDS 50.0%
CTCGAATAGCATGGCAGCAA+AGG + chr1_3:28343710-28343729 None:intergenic 50.0%
ACCATGAACTTGCAACCCCC+AGG - chr1_3:28342419-28342438 Msa0112810:CDS 55.0%
TCCTGGGGGTTGCAAGTTCA+TGG + chr1_3:28342423-28342442 None:intergenic 55.0%
AACTTGCAACCCCCAGGAGT+AGG - chr1_3:28342425-28342444 Msa0112810:CDS 55.0%
GTTGAAATGGCGAACCGGTC+CGG - chr1_3:28342496-28342515 Msa0112810:CDS 55.0%
GTTTCTGACGTATGCCGGAC+CGG + chr1_3:28342513-28342532 None:intergenic 55.0%
!!! GGGCGACACACTTTTTCAGC+CGG - chr1_3:28343276-28343295 Msa0112810:CDS 55.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 28341799 28344692 28341799 ID=Msa0112810;Name=Msa0112810
chr1_3 mRNA 28341799 28344692 28341799 ID=Msa0112810-mRNA-1;Parent=Msa0112810;Name=Msa0112810-mRNA-1;_AED=0.00;_eAED=0.00;_QI=72|1|1|1|1|1|3|108|835
chr1_3 exon 28341799 28342020 28341799 ID=Msa0112810-mRNA-1:exon:9344;Parent=Msa0112810-mRNA-1
chr1_3 exon 28342136 28344414 28342136 ID=Msa0112810-mRNA-1:exon:9343;Parent=Msa0112810-mRNA-1
chr1_3 exon 28344506 28344692 28344506 ID=Msa0112810-mRNA-1:exon:9342;Parent=Msa0112810-mRNA-1
chr1_3 five_prime_UTR 28344621 28344692 28344621 ID=Msa0112810-mRNA-1:five_prime_utr;Parent=Msa0112810-mRNA-1
chr1_3 CDS 28344506 28344620 28344506 ID=Msa0112810-mRNA-1:cds;Parent=Msa0112810-mRNA-1
chr1_3 CDS 28342136 28344414 28342136 ID=Msa0112810-mRNA-1:cds;Parent=Msa0112810-mRNA-1
chr1_3 CDS 28341907 28342020 28341907 ID=Msa0112810-mRNA-1:cds;Parent=Msa0112810-mRNA-1
chr1_3 three_prime_UTR 28341799 28341906 28341799 ID=Msa0112810-mRNA-1:three_prime_utr;Parent=Msa0112810-mRNA-1
Gene Sequence

>Msa0112810

ATGGTTACAAATATAGGGGATTTAATTCCTACCCATCCATCTTGTGAGGTTCTTGGGAGCAATGTCAATGAATCAAGAAATTGCAATACAACTTCTGCCACCTCGGATTCTAATGTGAAATTCAAGGACAACATTGAAAATGATGTAACCTTGGACGATATAGTTCCAAATGTTGGTATGGAATTTGATACTGAAGATCATGCATATAGGTTTTATAATATGTACGCAGGCTTTGTTGGTTTTAGCGTTAGAAAAGATTGGAGAAACAAAAGTAAATTAGATGAGGAGATTGTGATATCTCGAAAATTTTCTTGTTTTAAAGAAGGCTTCAAGAGAATAAAAGATGAAGAAGGAAAAGTGACTCGCAAAGATATCAGAACTGGTTGTTCAGCGCATTTGGTCATTGGTCGAGAATCCAATGGAAAATATGTGGTTACATCTTTTGTCAAAGACCATAACCATGAACTTGCAACCCCCAGGAGTAGGCATAAGTTACCATCACAAAGAAAAGTTTCTGTCGCTCAAGCTACTGAAGTTGAAATGGCGAACCGGTCCGGCATACGTCAGAAACTAATTTTTGAGTTCATTAGTCGACAAGTTGGAGGGAGAGAAAATGTTGGTTGCACTGCCAAAGATATTAGCAATCATTTAAATTCTAAAAGAATGAAGGAAATGGAGGAAGGTGAGGCATATACTCTTCTTCATTATTTTAAATCAAAGCAATCAGAGAATTCATCATTCTTTTATGAAATTCAACTAGACATTGATAATCTAATAACAAACATCTTTTGGGCTGATGCTAAAATGGTTGTGGATTATGCTTATTTTGGAGATGTAGTGTGTTTTGATACCACTTATCGCACTAATAAGAATTTACGACCATTTGCTCCGTTTGTTGGATTTAATCATCATCGAGAAAGTGTGTTATTTGGTGCAGCATTGTTATATGATGAGACAGCTGAATCATTTAAGTGGTTGTTCAAGACTTTTCTTAAAGCTATGTGTGGTAAAAAGCCGATGACAATTTTAACAGATCAAGATCCTGCAATGGCAAAGGCAATTTCAGAGGTTTTTCCCGAGTCATATCATCGTTTATGCTTGTGGCATTTATTTCAAAATGCACTAAAGAATGTTAATCATGCCTTTCAGCGATCTAATTATTTTGCTAGCGAGTTGCAAAGTTGCATTTATGGTTTCGAGTATGAGGATGATTTTCTGAATGCTTGGGAGTCATTACTTGACAAGCATAATCTTCGCCAAAATAAATGGATGCAAGATTTCTTTAACAAAAATGAAAAATGGGCTTCGGTATATGGGCGACACACTTTTTCAGCCGGTGCTACAACAACACAATTAAGTGAGAGCTTTAATGGCCGTTTAAGGCTTTACATGAAGCCTACCTTTAATGTGTTAGAATTTTTCAGAAATTTTGAGAGATTGCTAGATGATATGCGATATAAGGAGGTAGAGTCTAAATATGAAATGAGCCAGAAGATGCCATCATTGAATATGAACATCATGTTATTGAGAAATGCAAGAGATGTCTATACACCGACAATTTTTTCTCTTGTTCGTGGGGAATATGAAAAATCATGTAATCTTGTTTTGGCAATATGCACGCAGAACTTAGTGTTATATGAATATGATGTGTGCTTGTTTGGGGCTATGAGGAAGCATAAAGTTACCTTCAACTCTGAAGATCAAAGTGTTGAGTGTAGCTGTCAACTTTTTCAATTTGTTGGTATCCTTTGCTGCCATGCTATTCGAGTACTTAATCATTGGAATATAATTGTAATTCCTCCAAAATACATCCTTAAGAGATGGACTAAGAATGCTCGAAGTGGATGTGTTCTTGACAATAAAGGACAAATCATCAAAGAAGATCCTAAGTTAGTTGTCTTAAATCGCTCTAAGGATTTGTGTCGCACTGCGGTAGCAATATCATGTAAGGCTGCTAATTCTGAAGATGCTTCGTCATATTTAGCTAAAAAATTGGTGGAAATTGGACTTGAAGTTGAAAACATCTTGAGTAAAAGGTCTTCCATACAGAGTGCAGATCATGGTGATATAACTTGTCAAACAAATGATGTTAACTCTGATGACAGAACAATTGTTTTGAATGAAAACTTCAATGCATCTGAAGTTATGGGGATAAAAAAGAAGGATGGTGTATCCAGAGGAAAAGGTAGACCTAAGAGTTGTCTAGAGAGAAAATATAAAAGAAGAAAAGACACTCAAAAGTATAGTTCTGTGAGACATAATTTTTCTCCCACCATGCCAATTCCAATTATACAGGTAGAGCAAGGTAGTACTTATACAGCTACAACAAGACAGAATGTATTGTTTTCACATGGATGTCAAGATACACTAGCAATTGGTATTAATGCAACACAGAAGGAAGATATTCAAGTCTGTCAAAATGTAATTTCAGAGATAACGAATGCAGAGGCTGAGACACCATTTTCAACAAGTCACATTGATTGGAAGAAGACATTTGGGTGCAACTAA
Protein sequence

>Msa0112810

MVTNIGDLIPTHPSCEVLGSNVNESRNCNTTSATSDSNVKFKDNIENDVTLDDIVPNVGMEFDTEDHAYRFYNMYAGFVGFSVRKDWRNKSKLDEEIVISRKFSCFKEGFKRIKDEEGKVTRKDIRTGCSAHLVIGRESNGKYVVTSFVKDHNHELATPRSRHKLPSQRKVSVAQATEVEMANRSGIRQKLIFEFISRQVGGRENVGCTAKDISNHLNSKRMKEMEEGEAYTLLHYFKSKQSENSSFFYEIQLDIDNLITNIFWADAKMVVDYAYFGDVVCFDTTYRTNKNLRPFAPFVGFNHHRESVLFGAALLYDETAESFKWLFKTFLKAMCGKKPMTILTDQDPAMAKAISEVFPESYHRLCLWHLFQNALKNVNHAFQRSNYFASELQSCIYGFEYEDDFLNAWESLLDKHNLRQNKWMQDFFNKNEKWASVYGRHTFSAGATTTQLSESFNGRLRLYMKPTFNVLEFFRNFERLLDDMRYKEVESKYEMSQKMPSLNMNIMLLRNARDVYTPTIFSLVRGEYEKSCNLVLAICTQNLVLYEYDVCLFGAMRKHKVTFNSEDQSVECSCQLFQFVGILCCHAIRVLNHWNIIVIPPKYILKRWTKNARSGCVLDNKGQIIKEDPKLVVLNRSKDLCRTAVAISCKAANSEDASSYLAKKLVEIGLEVENILSKRSSIQSADHGDITCQTNDVNSDDRTIVLNENFNASEVMGIKKKDGVSRGKGRPKSCLERKYKRRKDTQKYSSVRHNFSPTMPIPIIQVEQGSTYTATTRQNVLFSHGCQDTLAIGINATQKEDIQVCQNVISEITNAEAETPFSTSHIDWKKTFGCN*