AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0121050

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0121050 MtrunA17_Chr1g0179801 92.021 376 13 2 6 364 1 376 0.0 706
Msa0121050 MtrunA17_Chr7g0265221 66.053 380 105 4 6 361 1 380 0.0 515
Msa0121050 MtrunA17_Chr7g0250511 40.057 352 182 7 28 361 11 351 2.61e-85 262
Msa0121050 MtrunA17_Chr8g0345831 41.693 319 160 4 39 341 15 323 4.79e-76 238
Msa0121050 MtrunA17_Chr3g0128001 37.576 330 181 6 42 357 15 333 9.07e-68 217
Msa0121050 MtrunA17_Chr5g0426891 34.384 349 193 7 31 357 4 338 1.12e-67 216
Msa0121050 MtrunA17_Chr4g0050031 38.658 313 163 6 70 361 62 366 4.47e-67 216
Msa0121050 MtrunA17_Chr7g0242551 35.196 358 189 9 31 358 15 359 1.29e-61 201
Msa0121050 MtrunA17_Chr4g0006371 34.626 361 196 8 31 358 14 367 1.08e-60 199
Msa0121050 MtrunA17_Chr8g0375671 32.591 359 209 6 24 361 11 357 1.80e-58 193
Msa0121050 MtrunA17_Chr3g0126741 36.972 284 145 6 70 330 59 331 1.24e-57 191
Msa0121050 MtrunA17_Chr8g0375681 36.364 286 169 6 80 361 9 285 4.64e-57 187
Msa0121050 MtrunA17_Chr2g0314381 32.948 346 199 8 36 361 48 380 1.30e-56 189
Msa0121050 MtrunA17_Chr5g0421091 31.805 349 208 7 31 361 11 347 1.88e-56 188
Msa0121050 MtrunA17_Chr8g0375601 31.445 353 213 7 31 363 11 354 2.52e-56 188
Msa0121050 MtrunA17_Chr5g0420981 31.073 354 207 7 30 361 17 355 4.06e-56 187
Msa0121050 MtrunA17_Chr8g0365241 31.429 350 210 6 30 361 22 359 6.95e-56 187
Msa0121050 MtrunA17_Chr5g0420901 32.578 353 199 8 31 361 12 347 1.17e-55 186
Msa0121050 MtrunA17_Chr2g0314391 32.386 352 205 7 30 361 35 373 1.76e-55 186
Msa0121050 MtrunA17_Chr1g0184151 33.234 334 191 6 31 344 1 322 3.40e-55 184
Msa0121050 MtrunA17_Chr7g0239111 33.807 352 197 10 31 361 20 356 3.91e-55 185
Msa0121050 MtrunA17_Chr3g0113641 33.708 356 196 9 31 360 15 356 2.71e-54 182
Msa0121050 MtrunA17_Chr5g0423221 32.386 352 204 9 30 361 36 373 3.97e-54 182
Msa0121050 MtrunA17_Chr2g0314401 31.624 351 209 7 30 361 16 354 1.13e-53 181
Msa0121050 MtrunA17_Chr5g0420941 30.659 349 211 9 31 361 11 346 1.20e-53 181
Msa0121050 MtrunA17_Chr3g0109041 32.861 353 209 9 31 363 10 354 3.19e-53 179
Msa0121050 MtrunA17_Chr5g0423191 32.033 359 196 11 31 368 13 344 4.62e-53 179
Msa0121050 MtrunA17_Chr1g0184161 33.333 324 185 6 39 344 12 322 1.23e-52 177
Msa0121050 MtrunA17_Chr1g0184101 31.722 331 196 6 31 342 1 320 3.00e-52 177
Msa0121050 MtrunA17_Chr5g0420951 31.161 353 206 10 31 361 18 355 5.39e-52 176
Msa0121050 MtrunA17_Chr7g0239101 31.161 353 209 9 31 363 20 358 1.87e-51 175
Msa0121050 MtrunA17_Chr8g0375571 30.685 365 214 8 22 362 2 351 2.44e-51 174
Msa0121050 MtrunA17_Chr1g0184121 32.923 325 188 6 37 343 9 321 5.30e-51 173
Msa0121050 MtrunA17_Chr5g0423201 34.507 284 168 5 85 361 77 349 5.88e-51 174
Msa0121050 MtrunA17_Chr2g0311831 33.154 371 204 11 15 361 21 371 1.69e-50 173
Msa0121050 MtrunA17_Chr5g0421101 30.925 346 206 8 31 357 13 344 1.84e-50 172
Msa0121050 MtrunA17_Chr5g0398291 32.047 337 202 8 31 344 8 340 2.29e-50 172
Msa0121050 MtrunA17_Chr5g0437181 33.053 357 197 9 31 360 14 355 2.73e-50 172
Msa0121050 MtrunA17_Chr7g0239121 33.631 336 186 11 31 344 16 336 3.02e-50 172
Msa0121050 MtrunA17_Chr8g0336851 30.986 355 205 8 30 361 27 364 3.19e-50 172
Msa0121050 MtrunA17_Chr5g0423251 29.345 351 215 8 30 361 12 348 3.43e-50 171
Msa0121050 MtrunA17_Chr5g0421011 30.532 357 213 8 25 361 7 348 3.64e-50 171
Msa0121050 MtrunA17_Chr2g0311631 30.919 359 209 7 29 363 20 363 3.93e-50 172
Msa0121050 MtrunA17_Chr2g0311711 33.526 346 186 8 30 348 30 358 7.54e-50 171
Msa0121050 MtrunA17_Chr5g0424201 33.129 326 177 10 41 342 19 327 1.10e-49 170
Msa0121050 MtrunA17_Chr8g0371931 39.256 242 131 6 85 320 72 303 1.15e-49 171
Msa0121050 MtrunA17_Chr5g0412651 35.897 273 165 4 85 353 71 337 1.31e-49 170
Msa0121050 MtrunA17_Chr7g0239821 32.390 318 185 8 69 366 63 370 1.51e-49 170
Msa0121050 MtrunA17_Chr5g0423211 29.060 351 216 8 31 361 13 350 5.93e-49 168
Msa0121050 MtrunA17_Chr7g0220011 32.628 331 196 7 41 356 15 333 7.84e-49 167
Msa0121050 MtrunA17_Chr5g0412671 35.587 281 171 4 85 361 71 345 9.97e-49 167
Msa0121050 MtrunA17_Chr1g0184111 32.000 325 191 6 37 343 9 321 1.31e-48 167
Msa0121050 MtrunA17_Chr2g0296371 29.508 366 219 7 20 361 6 356 1.66e-48 167
Msa0121050 MtrunA17_Chr6g0472861 32.941 340 193 10 30 344 27 356 3.25e-48 167
Msa0121050 MtrunA17_Chr8g0370711 33.103 290 167 6 64 333 46 328 4.66e-48 166
Msa0121050 MtrunA17_Chr7g0239071 34.875 281 170 6 85 361 30 301 5.95e-48 164
Msa0121050 MtrunA17_Chr5g0412681 34.007 297 176 5 70 352 33 323 1.03e-47 164
Msa0121050 MtrunA17_Chr1g0170631 43.147 197 102 5 168 361 3 192 1.45e-47 160
Msa0121050 MtrunA17_Chr3g0093761 30.220 364 228 7 13 361 1 353 1.85e-47 164
Msa0121050 MtrunA17_Chr8g0370721 34.483 290 163 6 64 333 46 328 2.31e-47 164
Msa0121050 MtrunA17_Chr3g0093741 29.972 357 225 6 20 361 8 354 2.39e-47 164
Msa0121050 MtrunA17_Chr7g0266651 30.163 368 218 10 17 361 11 362 2.72e-47 164
Msa0121050 MtrunA17_Chr3g0093751 29.692 357 226 6 20 361 8 354 3.72e-47 164
Msa0121050 MtrunA17_Chr5g0421041 30.556 360 200 11 30 368 12 342 4.66e-47 163
Msa0121050 MtrunA17_Chr8g0348081 31.180 356 203 8 30 361 27 364 5.27e-47 163
Msa0121050 MtrunA17_Chr5g0405411 38.174 241 135 5 85 320 72 303 5.41e-47 163
Msa0121050 MtrunA17_Chr8g0371921 37.917 240 137 5 85 320 72 303 5.57e-47 163
Msa0121050 MtrunA17_Chr5g0424211 32.581 310 178 7 41 330 17 315 8.82e-47 162
Msa0121050 MtrunA17_Chr8g0336861 30.973 339 193 9 30 344 27 348 1.09e-46 162
Msa0121050 MtrunA17_Chr7g0225881 31.642 335 199 8 30 343 27 352 1.60e-46 162
Msa0121050 MtrunA17_Chr8g0354261 33.138 341 189 8 30 345 32 358 2.36e-46 162
Msa0121050 MtrunA17_Chr8g0336761 29.775 356 208 8 30 361 27 364 3.46e-46 161
Msa0121050 MtrunA17_Chr3g0145171 31.908 304 174 7 64 341 46 342 5.06e-46 160
Msa0121050 MtrunA17_Chr8g0336631 30.252 357 206 10 30 361 27 365 5.45e-46 161
Msa0121050 MtrunA17_Chr3g0102041 37.449 243 134 6 85 320 72 303 8.29e-46 160
Msa0121050 MtrunA17_Chr2g0311761 31.831 355 205 9 30 361 32 372 8.39e-46 160
Msa0121050 MtrunA17_Chr6g0455481 33.213 277 175 4 85 358 70 339 1.02e-45 159
Msa0121050 MtrunA17_Chr1g0187821 31.933 357 206 9 29 361 27 370 1.08e-45 160
Msa0121050 MtrunA17_Chr1g0187831 31.268 339 199 8 30 344 29 357 1.25e-45 160
Msa0121050 MtrunA17_Chr7g0232161 31.962 316 177 10 31 325 25 323 1.88e-45 158
Msa0121050 MtrunA17_Chr8g0375701 30.245 367 223 10 14 361 3 355 5.51e-45 158
Msa0121050 MtrunA17_Chr8g0354241 30.556 360 211 8 30 364 32 377 5.95e-45 158
Msa0121050 MtrunA17_Chr2g0311701 31.085 341 196 8 30 344 32 359 8.86e-45 158
Msa0121050 MtrunA17_Chr1g0162191 30.499 341 199 10 39 356 20 345 1.07e-44 157
Msa0121050 MtrunA17_Chr2g0311681 31.195 343 193 7 30 344 26 353 1.09e-44 157
Msa0121050 MtrunA17_Chr2g0311691 31.487 343 192 8 30 344 26 353 3.42e-44 156
Msa0121050 MtrunA17_Chr1g0161041 31.944 360 207 9 17 355 47 389 4.79e-44 156
Msa0121050 MtrunA17_Chr8g0336781 29.296 355 212 7 30 361 62 400 6.82e-44 156
Msa0121050 MtrunA17_Chr3g0114861 31.707 328 195 9 31 341 6 321 7.74e-44 154
Msa0121050 MtrunA17_Chr3g0125201 34.155 284 152 6 68 329 1 271 4.69e-43 151
Msa0121050 MtrunA17_Chr1g0187811 30.278 360 213 8 30 361 144 493 5.22e-43 155
Msa0121050 MtrunA17_Chr4g0066121 33.033 333 176 12 31 336 28 340 5.27e-43 153
Msa0121050 MtrunA17_Chr2g0311921 30.978 368 209 12 15 357 7 354 1.46e-42 152
Msa0121050 MtrunA17_Chr2g0311861 32.941 340 200 9 30 361 28 347 1.84e-42 151
Msa0121050 MtrunA17_Chr2g0311741 35.521 259 155 4 85 341 60 308 8.36e-42 149
Msa0121050 MtrunA17_Chr2g0332191 30.233 344 210 6 37 366 23 350 9.93e-42 150
Msa0121050 MtrunA17_Chr1g0161081 31.653 357 212 10 17 355 24 366 1.43e-41 149
Msa0121050 MtrunA17_Chr1g0184241 29.155 367 209 8 6 343 5 349 1.80e-41 149
Msa0121050 MtrunA17_Chr3g0126761 41.104 163 92 1 168 330 44 202 2.12e-41 145
Msa0121050 MtrunA17_Chr7g0235951 29.839 372 215 10 16 361 22 373 2.59e-41 149
Msa0121050 MtrunA17_Chr8g0336751 29.545 352 208 9 14 343 46 379 2.95e-41 149
Msa0121050 MtrunA17_Chr1g0167911 31.395 344 204 8 30 354 19 349 3.48e-41 148
Msa0121050 MtrunA17_Chr1g0161111 31.085 341 200 8 29 349 94 419 4.55e-41 149
Msa0121050 MtrunA17_Chr4g0064781 33.083 266 162 6 85 341 78 336 7.26e-41 147
Msa0121050 MtrunA17_Chr7g0220001 31.154 260 170 3 85 342 69 321 7.36e-41 146
Msa0121050 MtrunA17_Chr4g0045411 33.955 268 156 6 85 341 68 325 7.80e-41 147
Msa0121050 MtrunA17_Chr1g0204181 31.818 330 180 8 42 342 38 351 9.01e-41 147
Msa0121050 MtrunA17_Chr4g0055591 28.612 353 216 9 30 361 24 361 2.30e-40 146
Msa0121050 MtrunA17_Chr8g0364471 30.000 340 198 9 30 344 32 356 3.17e-40 145
Msa0121050 MtrunA17_Chr4g0045471 32.281 285 169 7 85 353 63 339 3.02e-39 142
Msa0121050 MtrunA17_Chr1g0162351 32.414 290 164 7 85 357 108 382 4.39e-39 143
Msa0121050 MtrunA17_Chr7g0247991 32.402 358 200 9 30 361 32 373 7.26e-39 142
Msa0121050 MtrunA17_Chr1g0191201 29.248 359 203 10 40 363 31 373 9.99e-39 142
Msa0121050 MtrunA17_Chr6g0474391 31.153 321 180 7 42 335 43 349 1.09e-38 142
Msa0121050 MtrunA17_Chr7g0235981 31.232 349 203 9 20 361 9 327 1.49e-38 140
Msa0121050 MtrunA17_Chr1g0167951 30.725 345 199 11 14 336 4 330 1.56e-38 140
Msa0121050 MtrunA17_Chr3g0145181 29.545 352 206 11 23 346 5 342 1.58e-38 140
Msa0121050 MtrunA17_Chr1g0167961 31.092 357 202 13 15 346 20 357 2.11e-38 141
Msa0121050 MtrunA17_Chr8g0335411 32.222 360 198 11 30 361 32 373 3.39e-38 140
Msa0121050 MtrunA17_Chr5g0420721 32.830 265 150 8 110 368 4 246 6.03e-38 137
Msa0121050 MtrunA17_Chr4g0045441 31.879 298 172 8 85 366 63 345 7.95e-38 139
Msa0121050 MtrunA17_Chr1g0158011 32.234 273 169 6 93 362 3 262 7.96e-38 136
Msa0121050 MtrunA17_Chr3g0087031 30.108 279 183 6 85 361 92 360 1.10e-37 139
Msa0121050 MtrunA17_Chr1g0162321 31.834 289 167 7 85 357 108 382 1.24e-37 139
Msa0121050 MtrunA17_Chr4g0045431 32.155 283 173 4 85 354 63 339 3.76e-37 137
Msa0121050 MtrunA17_Chr7g0239091 30.990 313 176 10 69 361 159 451 3.90e-37 139
Msa0121050 MtrunA17_Chr1g0162361 33.667 300 173 10 85 368 55 344 5.63e-37 136
Msa0121050 MtrunA17_Chr4g0045451 31.522 276 164 7 85 344 63 329 5.98e-37 136
Msa0121050 MtrunA17_Chr5g0420881 41.958 143 82 1 220 361 2 144 2.76e-36 129
Msa0121050 MtrunA17_Chr8g0362741 31.907 257 156 7 30 282 32 273 4.03e-36 132
Msa0121050 MtrunA17_Chr3g0130391 29.023 348 200 9 42 357 45 377 1.60e-35 133
Msa0121050 MtrunA17_Chr7g0265351 29.749 279 186 3 85 361 67 337 4.81e-35 131
Msa0121050 MtrunA17_Chr4g0011311 28.475 295 176 7 30 306 32 309 2.49e-34 128
Msa0121050 MtrunA17_Chr3g0145201 31.081 296 166 9 65 333 679 963 2.80e-34 134
Msa0121050 MtrunA17_Chr8g0351101 29.179 329 189 7 42 342 33 345 6.45e-34 129
Msa0121050 MtrunA17_Chr3g0114871 30.797 276 157 8 40 297 16 275 1.21e-33 125
Msa0121050 MtrunA17_Chr3g0121141 30.794 315 177 10 70 358 4 303 1.46e-33 126
Msa0121050 MtrunA17_Chr3g0125421 30.000 330 185 10 42 342 16 328 3.47e-33 127
Msa0121050 MtrunA17_Chr2g0289341 32.000 250 143 7 85 325 35 266 9.54e-33 124
Msa0121050 MtrunA17_Chr7g0236011 29.888 358 209 9 30 361 32 373 5.93e-32 123
Msa0121050 MtrunA17_Chr8g0336801 37.671 146 88 1 219 361 11 156 6.26e-32 117
Msa0121050 MtrunA17_Chr1g0167931 28.869 336 189 12 30 356 19 313 3.64e-31 120
Msa0121050 MtrunA17_Chr5g0439011 29.514 288 166 7 68 333 3 275 7.02e-31 119
Msa0121050 MtrunA17_Chr2g0314371 29.299 314 166 11 30 301 16 315 1.09e-29 116
Msa0121050 MtrunA17_Chr4g0053251 31.174 247 151 8 86 320 50 289 2.00e-29 115
Msa0121050 MtrunA17_Chr4g0066991 32.277 347 195 13 30 361 32 353 2.70e-29 116
Msa0121050 MtrunA17_Chr4g0045461 29.537 281 180 6 85 353 63 337 6.13e-29 115
Msa0121050 MtrunA17_Chr4g0075471 45.714 105 56 1 222 325 32 136 1.38e-28 109
Msa0121050 MtrunA17_Chr8g0384481 28.060 335 201 8 42 352 38 356 4.50e-28 113
Msa0121050 MtrunA17_Chr8g0384461 28.409 264 176 4 85 342 81 337 1.26e-27 111
Msa0121050 MtrunA17_Chr1g0148771 29.560 318 192 9 39 336 27 332 2.20e-27 110
Msa0121050 MtrunA17_Chr3g0092531 32.099 243 148 7 85 324 41 269 3.18e-26 107
Msa0121050 MtrunA17_Chr2g0319491 29.167 240 157 5 85 323 66 293 1.66e-25 105
Msa0121050 MtrunA17_Chr8g0336871 33.742 163 91 4 185 343 7 156 8.87e-25 99.4
Msa0121050 MtrunA17_Chr4g0068891 27.703 296 161 10 85 346 47 323 5.54e-24 100
Msa0121050 MtrunA17_Chr6g0488511 27.551 294 173 8 68 338 1 277 1.06e-23 99.8
Msa0121050 MtrunA17_Chr8g0358941 27.626 257 159 8 85 325 52 297 4.03e-23 98.6
Msa0121050 MtrunA17_Chr2g0285931 26.415 265 171 7 85 335 53 307 4.89e-23 98.6
Msa0121050 MtrunA17_Chr4g0064771 34.091 176 102 4 174 341 32 201 6.47e-23 95.5
Msa0121050 MtrunA17_Chr1g0194321 28.996 269 161 8 85 333 47 305 2.08e-22 96.7
Msa0121050 MtrunA17_Chr1g0158021 27.386 241 141 6 55 274 34 261 4.80e-22 94.4
Msa0121050 MtrunA17_Chr6g0486831 29.304 273 158 6 86 333 50 312 1.07e-21 94.7
Msa0121050 MtrunA17_Chr4g0037611 37.008 127 78 2 194 318 10 136 4.00e-21 89.7
Msa0121050 MtrunA17_Chr2g0313111 27.481 262 173 9 85 339 53 304 8.02e-21 92.0
Msa0121050 MtrunA17_Chr4g0004071 29.442 197 131 4 160 355 117 306 1.07e-20 91.3
Msa0121050 MtrunA17_Chr7g0233661 34.815 135 82 1 217 351 19 147 1.11e-20 87.8
Msa0121050 MtrunA17_Chr1g0170641 36.111 144 81 2 36 168 18 161 1.62e-20 87.4
Msa0121050 MtrunA17_Chr1g0158031 30.688 189 117 5 179 362 2 181 1.64e-20 87.8
Msa0121050 MtrunA17_Chr8g0364171 32.031 128 81 1 155 282 5 126 4.04e-20 85.9
Msa0121050 MtrunA17_Chr5g0394071 39.655 116 68 1 220 333 48 163 9.00e-20 85.9
Msa0121050 MtrunA17_Chr2g0293931 37.762 143 79 5 172 307 11 150 3.71e-19 85.1
Msa0121050 MtrunA17_Chr8g0389941 27.306 271 164 6 86 333 63 323 6.70e-19 86.7
Msa0121050 MtrunA17_Chr4g0004061 31.156 199 126 6 160 355 117 307 9.08e-19 85.9
Msa0121050 MtrunA17_Chr4g0055911 27.119 295 178 10 67 333 6 291 1.06e-17 83.2
Msa0121050 MtrunA17_Chr3g0105281 28.205 234 143 9 85 307 58 277 1.47e-17 82.8
Msa0121050 MtrunA17_Chr1g0161101 45.977 87 38 1 214 300 401 478 1.48e-17 84.0
Msa0121050 MtrunA17_Chr8g0375581 47.761 67 34 1 213 278 19 85 1.75e-17 76.6
Msa0121050 MtrunA17_Chr3g0092581 36.667 120 73 2 205 322 21 139 3.14e-16 76.3
Msa0121050 MtrunA17_Chr8g0336831 27.586 232 130 8 29 239 26 240 3.47e-16 77.4
Msa0121050 MtrunA17_Chr2g0311611 45.714 70 31 1 220 282 2 71 5.41e-16 72.0
Msa0121050 MtrunA17_Chr4g0009561 24.275 276 180 11 91 353 51 310 1.10e-15 77.0
Msa0121050 MtrunA17_Chr4g0052251 25.692 253 166 7 85 325 54 296 1.17e-15 77.0
Msa0121050 MtrunA17_Chr3g0138351 27.179 195 135 4 160 351 118 308 1.58e-15 76.6
Msa0121050 MtrunA17_Chr7g0219991 39.655 116 62 4 163 277 243 351 1.66e-15 77.0
Msa0121050 MtrunA17_Chr4g0055871 24.031 258 177 5 86 333 38 286 2.84e-15 75.9
Msa0121050 MtrunA17_Chr1g0184141 30.469 128 81 3 100 226 8 128 1.24e-14 70.1
Msa0121050 MtrunA17_Chr4g0009541 22.756 312 186 9 69 344 6 298 3.70e-14 72.4
Msa0121050 MtrunA17_Chr1g0167921 30.075 133 82 3 153 281 31 156 6.40e-14 69.3
Msa0121050 MtrunA17_Chr2g0311641 30.464 151 82 3 29 162 20 164 1.02e-13 68.6
Msa0121050 MtrunA17_Chr7g0247741 23.175 315 200 9 64 352 5 303 1.09e-12 68.2
Msa0121050 MtrunA17_Chr2g0319521 34.454 119 63 3 185 300 29 135 1.30e-12 64.7
Msa0121050 MtrunA17_Chr5g0407781 24.901 253 170 6 85 333 33 269 1.21e-11 64.7
Msa0121050 MtrunA17_Chr7g0256741 29.940 167 94 7 177 336 138 288 1.33e-11 65.1
Msa0121050 MtrunA17_Chr8g0375641 27.108 166 93 5 24 168 11 169 1.67e-11 62.8
Msa0121050 MtrunA17_Chr8g0348951 31.132 106 72 1 229 333 179 284 4.36e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0121050 AT2G36690.2 59.151 377 125 5 6 364 1 366 8.35e-158 447
Msa0121050 AT2G36690.1 59.151 377 125 5 6 364 1 366 8.35e-158 447
Msa0121050 AT3G60290.1 39.326 356 188 5 23 360 8 353 1.50e-86 266
Msa0121050 AT2G44800.1 39.943 348 181 5 34 363 19 356 7.93e-86 264
Msa0121050 AT4G10490.1 39.564 321 156 5 27 327 7 309 3.22e-77 242
Msa0121050 AT4G10500.1 41.176 306 146 4 42 327 20 311 3.46e-77 242
Msa0121050 AT5G07480.1 35.380 342 181 7 36 352 18 344 3.26e-68 219
Msa0121050 AT5G24530.1 37.261 314 162 7 33 326 4 302 8.95e-64 207
Msa0121050 AT2G38240.1 34.444 360 189 10 31 362 12 352 3.39e-59 195
Msa0121050 AT3G11180.1 34.294 347 202 6 31 358 56 395 4.14e-59 196
Msa0121050 AT3G11180.2 33.714 350 202 7 31 357 56 398 6.77e-57 191
Msa0121050 AT1G55290.1 35.329 334 185 7 29 344 24 344 5.27e-56 187
Msa0121050 AT5G05600.1 34.426 366 208 8 15 358 11 366 5.22e-54 182
Msa0121050 AT5G07480.2 38.017 242 136 4 118 352 1 235 1.25e-53 177
Msa0121050 AT1G17010.1 31.534 352 210 9 31 361 17 358 1.30e-51 176
Msa0121050 AT3G13610.1 32.537 335 192 7 29 344 25 344 7.22e-51 174
Msa0121050 AT3G12900.1 31.928 332 194 7 29 342 20 337 9.38e-51 173
Msa0121050 AT3G55970.1 32.011 353 211 8 31 360 14 360 1.84e-50 173
Msa0121050 AT4G16330.2 35.985 264 154 6 85 343 93 346 2.33e-49 170
Msa0121050 AT3G21420.1 31.755 359 210 8 28 361 14 362 5.84e-49 169
Msa0121050 AT1G17020.1 28.962 366 231 8 16 361 2 358 9.95e-49 168
Msa0121050 AT4G25310.1 34.164 281 170 7 85 361 84 353 2.81e-47 164
Msa0121050 AT4G25300.1 31.534 352 209 10 31 361 16 356 8.37e-47 163
Msa0121050 AT4G16330.1 35.409 257 152 5 106 358 9 255 1.43e-46 159
Msa0121050 AT3G51240.1 37.603 242 135 6 85 320 71 302 1.48e-46 162
Msa0121050 AT1G04350.1 32.773 357 200 12 29 361 20 360 3.65e-46 161
Msa0121050 AT5G59530.1 33.728 338 182 12 30 341 23 344 6.83e-46 161
Msa0121050 AT1G06620.1 33.033 333 191 8 29 341 25 345 9.58e-46 160
Msa0121050 AT5G43450.1 31.707 369 218 10 10 356 1 357 1.35e-45 160
Msa0121050 AT4G25420.1 32.817 323 185 6 42 342 40 352 2.48e-45 160
Msa0121050 AT2G30840.1 31.653 357 199 11 14 344 8 345 9.90e-45 158
Msa0121050 AT2G30830.1 32.362 343 193 9 25 344 15 341 2.42e-44 157
Msa0121050 AT1G03400.1 31.195 343 207 8 30 355 19 349 9.26e-44 155
Msa0121050 AT4G22880.1 29.377 337 212 7 31 344 7 340 1.77e-43 154
Msa0121050 AT4G22880.2 29.377 337 212 7 31 344 7 340 1.77e-43 154
Msa0121050 AT4G22880.3 29.377 337 212 7 31 344 7 340 1.77e-43 154
Msa0121050 AT1G78550.1 29.032 341 212 7 36 357 23 352 1.83e-43 154
Msa0121050 AT5G43440.1 31.902 326 193 8 30 335 23 339 2.30e-43 154
Msa0121050 AT1G78550.2 32.000 275 178 5 85 357 7 274 3.23e-43 151
Msa0121050 AT1G06650.2 31.768 362 193 12 14 342 13 353 9.58e-43 152
Msa0121050 AT1G03410.2 32.047 337 193 10 29 341 18 342 1.86e-42 152
Msa0121050 AT3G51240.2 37.719 228 126 6 99 320 1 218 3.23e-42 149
Msa0121050 AT1G03410.1 32.047 337 193 10 29 341 55 379 3.52e-42 152
Msa0121050 AT5G59540.1 32.143 336 191 10 30 341 24 346 5.94e-42 150
Msa0121050 AT5G08640.2 31.988 322 184 7 41 341 18 325 1.56e-41 149
Msa0121050 AT5G08640.1 31.988 322 184 7 41 341 18 325 1.56e-41 149
Msa0121050 AT5G20550.1 30.675 326 192 9 31 333 9 323 1.98e-41 149
Msa0121050 AT5G54000.2 33.597 253 156 5 85 333 79 323 3.91e-41 148
Msa0121050 AT3G19010.1 31.844 358 189 12 46 366 8 347 4.34e-41 148
Msa0121050 AT3G19010.4 31.844 358 189 12 46 366 8 347 4.34e-41 148
Msa0121050 AT2G30840.3 31.373 357 194 12 14 344 8 339 5.38e-41 148
Msa0121050 AT2G06960.1 45.509 167 72 3 185 351 1 148 5.39e-41 141
Msa0121050 AT5G12270.1 33.067 375 212 12 10 361 1 359 8.02e-41 147
Msa0121050 AT3G61400.1 29.024 379 228 10 6 356 1 366 1.60e-40 147
Msa0121050 AT1G06645.1 30.376 372 206 13 5 347 18 365 1.84e-40 147
Msa0121050 AT5G54000.1 33.068 251 156 5 87 333 1 243 1.86e-40 144
Msa0121050 AT1G77330.1 30.405 296 175 6 68 342 1 286 4.72e-40 144
Msa0121050 AT1G04380.1 32.588 313 176 9 42 335 23 319 1.15e-39 144
Msa0121050 AT1G06640.1 30.084 359 203 11 14 342 13 353 5.18e-39 143
Msa0121050 AT1G49390.1 29.358 327 194 9 31 333 9 322 1.61e-38 141
Msa0121050 AT5G51810.1 30.960 323 187 7 42 342 42 350 2.75e-38 141
Msa0121050 AT1G03400.2 28.841 371 207 9 30 355 19 377 7.56e-38 140
Msa0121050 AT5G05600.2 33.942 274 149 8 31 282 27 290 1.97e-37 137
Msa0121050 AT1G49390.2 32.016 253 156 6 87 333 1 243 2.19e-37 136
Msa0121050 AT5G20400.1 28.793 323 201 7 31 333 9 322 2.24e-37 138
Msa0121050 AT5G07200.1 28.235 340 200 7 33 342 28 353 3.81e-37 138
Msa0121050 AT1G60980.1 29.819 332 184 8 42 342 36 349 6.97e-37 137
Msa0121050 AT3G55970.2 32.364 275 157 8 31 282 14 282 2.94e-36 134
Msa0121050 AT1G15550.1 29.856 278 190 4 85 360 82 356 4.12e-36 135
Msa0121050 AT3G19000.1 29.930 284 174 5 85 352 65 339 5.25e-36 134
Msa0121050 AT2G25450.1 29.552 335 197 8 30 340 20 339 1.12e-35 134
Msa0121050 AT4G25300.2 36.224 196 119 3 167 361 72 262 1.54e-35 130
Msa0121050 AT1G06620.2 33.333 270 151 7 29 281 25 282 1.63e-35 131
Msa0121050 AT2G30840.2 32.414 290 156 9 14 281 8 279 1.23e-34 129
Msa0121050 AT5G43440.2 30.882 272 162 6 30 284 23 285 1.69e-34 129
Msa0121050 AT3G19010.3 29.330 358 168 11 46 366 8 317 2.46e-34 129
Msa0121050 AT5G43450.2 30.928 291 170 8 10 281 1 279 1.26e-33 126
Msa0121050 AT5G63590.1 33.712 264 159 6 85 338 42 299 1.67e-33 127
Msa0121050 AT1G80340.1 29.605 304 191 7 70 357 50 346 4.27e-33 126
Msa0121050 AT1G44090.1 29.245 318 182 8 42 332 43 344 1.45e-32 125
Msa0121050 AT1G12010.1 29.474 285 164 8 65 327 2 271 6.34e-32 122
Msa0121050 AT1G80330.1 28.615 325 205 11 39 342 16 334 1.14e-31 122
Msa0121050 AT1G06650.1 30.696 316 174 9 14 301 13 311 2.62e-31 121
Msa0121050 AT4G25420.2 32.046 259 144 6 42 278 40 288 2.88e-31 120
Msa0121050 AT4G25310.2 30.249 281 153 8 85 361 84 325 1.23e-30 119
Msa0121050 AT5G59540.2 31.387 274 154 9 30 282 24 284 1.33e-30 118
Msa0121050 AT4G21200.1 30.182 275 160 7 66 321 38 299 1.36e-30 119
Msa0121050 AT1G62380.1 27.719 285 169 7 65 327 2 271 1.43e-29 116
Msa0121050 AT5G43935.1 32.567 261 149 8 85 342 47 283 1.99e-29 115
Msa0121050 AT3G49620.1 31.984 247 150 7 86 320 76 316 6.72e-29 115
Msa0121050 AT1G04380.2 30.116 259 149 7 42 284 23 265 7.77e-29 113
Msa0121050 AT1G05010.1 30.216 278 158 7 70 325 4 267 1.23e-28 114
Msa0121050 AT1G50960.1 30.466 279 161 7 50 307 20 286 3.10e-28 113
Msa0121050 AT3G61400.2 28.428 299 181 7 6 282 1 288 3.16e-28 112
Msa0121050 AT3G50210.4 32.031 256 143 10 86 320 50 295 3.47e-28 113
Msa0121050 AT3G50210.1 32.031 256 143 10 86 320 50 295 3.47e-28 113
Msa0121050 AT3G50210.3 32.031 256 143 10 86 320 50 295 3.47e-28 113
Msa0121050 AT1G06640.2 29.252 294 175 7 14 288 13 292 5.18e-28 112
Msa0121050 AT3G19010.2 31.868 273 134 10 46 282 8 264 9.08e-28 111
Msa0121050 AT2G19590.1 27.599 279 172 6 65 325 6 272 1.04e-27 111
Msa0121050 AT1G06640.3 29.577 284 167 7 14 278 13 282 1.42e-27 110
Msa0121050 AT5G63600.1 26.625 323 195 9 56 357 19 320 1.02e-26 108
Msa0121050 AT5G63595.1 30.631 222 128 4 85 305 53 249 1.73e-26 107
Msa0121050 AT3G49630.1 30.364 247 154 7 86 320 51 291 3.00e-26 107
Msa0121050 AT5G63600.2 26.543 324 195 10 56 357 19 321 3.30e-26 107
Msa0121050 AT3G49630.3 30.364 247 154 7 86 320 47 287 4.16e-26 107
Msa0121050 AT5G51810.2 30.451 266 149 7 42 285 42 293 4.35e-26 106
Msa0121050 AT4G21690.1 26.642 274 191 5 85 351 72 342 1.25e-25 106
Msa0121050 AT2G19590.2 30.612 245 152 6 85 325 27 257 2.13e-25 104
Msa0121050 AT3G19000.2 28.829 222 133 5 85 290 65 277 4.90e-25 103
Msa0121050 AT1G78440.1 26.236 263 173 6 85 335 43 296 8.08e-25 103
Msa0121050 AT5G63580.2 33.333 201 124 4 85 282 47 240 7.10e-24 99.0
Msa0121050 AT5G63580.1 33.668 199 122 4 85 280 47 238 1.11e-23 99.0
Msa0121050 AT3G46500.5 30.035 283 157 8 86 344 46 311 2.15e-22 96.7
Msa0121050 AT1G30040.1 24.812 266 182 7 85 341 56 312 6.95e-20 90.1
Msa0121050 AT3G50210.2 32.738 168 102 5 159 320 51 213 3.03e-19 86.7
Msa0121050 AT3G46500.7 30.290 241 128 7 86 302 46 270 1.28e-18 85.5
Msa0121050 AT3G49630.2 32.927 164 102 4 159 320 61 218 2.18e-18 84.3
Msa0121050 AT3G46490.1 27.465 284 168 7 86 343 46 317 2.22e-18 85.5
Msa0121050 AT2G34555.1 24.399 291 201 8 85 365 52 333 1.17e-17 83.6
Msa0121050 AT3G46500.4 40.171 117 64 2 233 344 60 175 1.26e-17 80.5
Msa0121050 AT1G35190.1 28.881 277 173 7 86 343 41 312 1.37e-17 83.2
Msa0121050 AT1G35190.2 28.159 277 152 8 86 343 41 289 1.98e-17 82.4
Msa0121050 AT3G46490.2 28.782 271 145 8 86 326 46 298 2.17e-17 82.4
Msa0121050 AT3G46500.10 31.068 206 124 5 145 344 44 237 3.29e-17 80.9
Msa0121050 AT3G46500.1 31.068 206 124 5 145 344 44 237 3.29e-17 80.9
Msa0121050 AT1G02400.1 23.548 310 199 12 50 333 4 301 5.55e-17 81.3
Msa0121050 AT3G47190.1 24.373 279 181 6 49 304 8 279 5.77e-17 81.3
Msa0121050 AT1G14130.1 26.667 255 165 7 85 333 37 275 1.01e-16 80.5
Msa0121050 AT1G52820.1 27.551 196 130 5 160 352 120 306 3.08e-16 79.0
Msa0121050 AT5G58660.1 30.899 178 107 6 167 340 161 326 3.60e-16 79.3
Msa0121050 AT3G46480.1 40.678 118 64 2 232 344 155 271 3.76e-15 75.5
Msa0121050 AT4G22870.1 37.895 95 58 1 251 344 2 96 5.98e-15 70.9
Msa0121050 AT4G23340.2 28.261 138 95 2 216 349 44 181 3.85e-14 71.2
Msa0121050 AT4G23340.1 25.267 281 179 10 86 352 39 302 8.61e-14 72.0
Msa0121050 AT4G16765.3 30.481 187 116 6 156 333 46 227 1.57e-13 70.1
Msa0121050 AT3G46500.3 31.707 164 95 4 145 302 44 196 1.75e-13 69.7
Msa0121050 AT3G46500.6 46.667 75 35 1 233 302 91 165 1.94e-13 68.9
Msa0121050 AT3G46500.8 46.667 75 35 1 233 302 91 165 1.94e-13 68.9
Msa0121050 AT1G47990.1 26.174 298 173 12 85 361 42 313 2.13e-13 70.9
Msa0121050 AT4G03070.1 26.183 317 202 13 60 352 2 310 3.42e-13 70.1
Msa0121050 AT4G16765.5 37.037 108 62 2 231 333 75 181 3.63e-13 68.2
Msa0121050 AT4G16765.6 29.947 187 117 6 156 333 46 227 7.29e-13 68.2
Msa0121050 AT4G16765.1 29.947 187 117 6 156 333 46 227 7.29e-13 68.2
Msa0121050 AT4G16765.2 29.947 187 117 6 156 333 46 227 7.29e-13 68.2
Msa0121050 AT1G28030.1 25.243 309 179 13 68 342 11 301 1.01e-12 68.9
Msa0121050 AT1G14120.2 25.896 251 170 4 86 333 37 274 1.09e-12 68.6
Msa0121050 AT1G14120.1 25.896 251 170 4 86 333 37 274 1.09e-12 68.6
Msa0121050 AT1G14120.3 25.896 251 170 4 86 333 37 274 1.09e-12 68.6
Msa0121050 AT4G03050.2 31.746 126 84 2 229 352 271 396 1.32e-12 68.9
Msa0121050 AT4G03050.1 31.746 126 84 2 229 352 271 396 1.32e-12 68.9
Msa0121050 AT4G22870.2 36.364 88 55 1 258 344 50 137 5.24e-12 63.9

Find 85 sgRNAs with CRISPR-Local

Find 272 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAAGGACTTGAGGCCTATT+TGG 0.218488 1_3:-46453299 None:intergenic
ACACTTATTTCTAAGGTTAA+TGG 0.222487 1_3:+46455710 Msa0121050:CDS
ACAACGAATGCATTATTAAT+AGG 0.241440 1_3:-46455972 None:intergenic
AAACCAAACACTTATTTCTA+AGG 0.253076 1_3:+46455703 Msa0121050:CDS
TGAACCATTGTTCTTGGAAT+TGG 0.275458 1_3:-46455941 None:intergenic
CTGATTTGATTGGTCCAAAT+AGG 0.288891 1_3:+46453285 Msa0121050:CDS
ATCGGTGTCTGCGTAACGTT+TGG 0.310799 1_3:-46457962 None:intergenic
GAATCTTCAGTATTCTTAAC+AGG 0.331015 1_3:-46453218 None:intergenic
GGACAATATTATCAAAGAAT+TGG 0.341222 1_3:+46455782 Msa0121050:CDS
TCACTAAATATTGTCATTCC+AGG 0.352095 1_3:-46453080 None:intergenic
GAACCGTGAACCATTGTTCT+TGG 0.352914 1_3:-46455947 None:intergenic
CTTAAGTCCACGGGTGAATC+AGG 0.362636 1_3:-46454113 None:intergenic
ATAGATTTCTCTGATTTGAT+TGG 0.378631 1_3:+46453275 Msa0121050:CDS
TACTTACCTCTTTCCTCAAA+TGG 0.387893 1_3:-46453960 None:intergenic
GGAAGATGGGAGCCAGCTTA+TGG 0.392686 1_3:+46455803 Msa0121050:CDS
CTGATTCACCCGTGGACTTA+AGG 0.394075 1_3:+46454114 Msa0121050:CDS
TATACCTAAACTCTCTACTA+TGG 0.399689 1_3:-46455736 None:intergenic
GGCCAATGGGGAAGATAATC+AGG 0.400544 1_3:-46454092 None:intergenic
ATGAGAGCAGCAGTTCGATA+TGG 0.411261 1_3:+46453996 Msa0121050:CDS
GTGAAGCAGCTAGTTGATAA+TGG 0.414485 1_3:+46453149 Msa0121050:CDS
TAACCTTAGAAATAAGTGTT+TGG 0.414596 1_3:-46455706 None:intergenic
ACTCTTTCTCTTGGTTTCGT+TGG 0.418266 1_3:-46458013 None:intergenic
TCGGTGTCTGCGTAACGTTT+GGG 0.421674 1_3:-46457961 None:intergenic
GAAGCCATAGTAGAGAGTTT+AGG 0.422645 1_3:+46455732 Msa0121050:CDS
GTCTGCGTAACGTTTGGGAT+TGG 0.431669 1_3:-46457956 None:intergenic
CTCCAGAAAACTCTTTCTCT+TGG 0.443477 1_3:-46458022 None:intergenic
CACGGGTGAATCAGGCCAAT+GGG 0.444035 1_3:-46454105 None:intergenic
GGCAAGAAAAGTTTCAAAAT+CGG 0.448587 1_3:-46457980 None:intergenic
TTAATTAAAATGTAGGAAAG+TGG 0.466796 1_3:+46455662 Msa0121050:intron
ATTATCAAAGAATTGGAAGA+TGG 0.467688 1_3:+46455789 Msa0121050:CDS
TGCCTGATTATCTTCCCCAT+TGG 0.469148 1_3:+46454090 Msa0121050:CDS
AATACAAGAGTGTGCTACAT+AGG 0.473985 1_3:+46457833 Msa0121050:CDS
TGAAGCCAACAAAGAAGAAA+AGG 0.484492 1_3:+46455761 Msa0121050:CDS
GGCATCCCTAGGGTTAGGTC+AGG 0.492951 1_3:-46455855 None:intergenic
GATCTTCCATTTGAGGAAAG+AGG 0.501424 1_3:+46453954 Msa0121050:CDS
TATTTAGTGAAGATATCAAA+GGG 0.504869 1_3:+46453093 Msa0121050:CDS
AAATCAGAGAAATCTATGAT+TGG 0.515757 1_3:-46453269 None:intergenic
GGTTTCGTTGGTTGAAATGT+GGG 0.516096 1_3:-46458001 None:intergenic
GTTAGGTCAGGTTGAGGACA+TGG 0.520576 1_3:-46455843 None:intergenic
TGGTTTCGTTGGTTGAAATG+TGG 0.525695 1_3:-46458002 None:intergenic
CCTTCTTCAAGATGAGGTAG+AGG 0.529153 1_3:+46455908 Msa0121050:CDS
ATAGAAAATCAATTTCTGAA+TGG 0.536962 1_3:+46453125 Msa0121050:CDS
ATTCCAAGAACAATGGTTCA+CGG 0.541633 1_3:+46455944 Msa0121050:CDS
TAACATCTTCTGAGATCCCA+TGG 0.547430 1_3:-46453896 None:intergenic
AGGAATCCATAGTCAGAATG+AGG 0.549394 1_3:-46455879 None:intergenic
AATCTATGATTGGTAGCTGT+AGG 0.551270 1_3:-46453259 None:intergenic
CCTCTACCTCATCTTGAAGA+AGG 0.552637 1_3:-46455908 None:intergenic
TTCTTAACAGGACGTTCAGA+AGG 0.564901 1_3:-46453206 None:intergenic
CCACGGGTGAATCAGGCCAA+TGG 0.566357 1_3:-46454106 None:intergenic
GTGTTTGGTTTCTTCTGCGT+AGG 0.567429 1_3:-46455691 None:intergenic
TTATCAAAGAATTGGAAGAT+GGG 0.570568 1_3:+46455790 Msa0121050:CDS
CTTCTTCAAGATGAGGTAGA+GGG 0.575550 1_3:+46455909 Msa0121050:CDS
TTGATAAAGGTGGTAAACCA+TGG 0.576959 1_3:+46453879 Msa0121050:intron
AATGCATTCGTTGTCAATGT+TGG 0.578383 1_3:+46455981 Msa0121050:CDS
ATACAAGAGTGTGCTACATA+GGG 0.579473 1_3:+46457834 Msa0121050:CDS
CCTCAACCTGACCTAACCCT+AGG 0.580697 1_3:+46455849 Msa0121050:CDS
AAATACACACCTTAAGTCCA+CGG 0.583362 1_3:-46454123 None:intergenic
AGATGTTATCAACAACATGA+TGG 0.583825 1_3:+46453911 Msa0121050:CDS
CCTAGGGTTAGGTCAGGTTG+AGG 0.589376 1_3:-46455849 None:intergenic
TGATAAAGGTGGTAAACCAT+GGG 0.593471 1_3:+46453880 Msa0121050:intron
ATTAAAATGTAGGAAAGTGG+CGG 0.593821 1_3:+46455665 Msa0121050:intron
GAAGATAATCAGGCAAAGGA+TGG 0.594394 1_3:-46454082 None:intergenic
TTAACAGGACGTTCAGAAGG+AGG 0.597751 1_3:-46453203 None:intergenic
CTCAACCTGACCTAACCCTA+GGG 0.597884 1_3:+46455850 Msa0121050:CDS
AGTTGATAATGGACTTCGTA+CGG 0.603305 1_3:+46453160 Msa0121050:CDS
AATGCTATGCAATGAAGCAA+TGG 0.614624 1_3:-46457887 None:intergenic
TTGGCTTTGTCAATGAGTGT+AGG 0.614803 1_3:-46457937 None:intergenic
AATACACACCTTAAGTCCAC+GGG 0.616230 1_3:-46454122 None:intergenic
ATATTGCATAACATGTCACC+TGG 0.616301 1_3:+46453062 Msa0121050:CDS
ATATTTAGTGAAGATATCAA+AGG 0.617640 1_3:+46453092 Msa0121050:CDS
TGGGGAAGATAATCAGGCAA+AGG 0.620881 1_3:-46454086 None:intergenic
CCATTGGCCTGATTCACCCG+TGG 0.623004 1_3:+46454106 Msa0121050:CDS
CACACTCCTTCTTCAAGATG+AGG 0.627054 1_3:+46455902 Msa0121050:CDS
GGAATCCATAGTCAGAATGA+GGG 0.629331 1_3:-46455878 None:intergenic
AAGTCCAATTCCAAGAACAA+TGG 0.641965 1_3:+46455937 Msa0121050:CDS
CATCTTGAAGAAGGAGTGTG+AGG 0.647975 1_3:-46455899 None:intergenic
AGATGGGAGCCAGCTTATGG+CGG 0.651529 1_3:+46455806 Msa0121050:CDS
TTGTCAATGAGTGTAGGTGA+CGG 0.654799 1_3:-46457931 None:intergenic
CAATGTTGGTGATCACCTTG+AGG 0.661702 1_3:+46455995 Msa0121050:CDS
GAATCCATAGTCAGAATGAG+GGG 0.688282 1_3:-46455877 None:intergenic
AACAACATGATGGATGTGTG+TGG 0.693738 1_3:+46453921 Msa0121050:CDS
ACGGGTGAATCAGGCCAATG+GGG 0.696556 1_3:-46454104 None:intergenic
AATCCATAGTCAGAATGAGG+GGG 0.703984 1_3:-46455876 None:intergenic
AGGTCAGGTTGAGGACATGG+TGG 0.710387 1_3:-46455840 None:intergenic
ATTTAGTGAAGATATCAAAG+GGG 0.746024 1_3:+46453094 Msa0121050:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAATAAATTATATAATA+TGG + chr1_3:46457517-46457536 Msa0121050:intron 0.0%
!! TGAAAAAAAATAAAATTGTA+CGG - chr1_3:46453555-46453574 None:intergenic 10.0%
!!! TAATATTTTGAACAATTATT+AGG - chr1_3:46454380-46454399 None:intergenic 10.0%
!! ATTGTATATATATACATTAA+GGG - chr1_3:46454703-46454722 None:intergenic 10.0%
!! AATTGTATATATATACATTA+AGG - chr1_3:46454704-46454723 None:intergenic 10.0%
!! CATTATATCAATAATAAATA+AGG + chr1_3:46454879-46454898 Msa0121050:intron 10.0%
!!! TTGATTTTTAATTAAAATGT+AGG + chr1_3:46455655-46455674 Msa0121050:intron 10.0%
!!! TTTTTATCTTCTTAATAATT+TGG + chr1_3:46456782-46456801 Msa0121050:intron 10.0%
!! TATAACAAGATAAATTATAT+TGG - chr1_3:46457330-46457349 None:intergenic 10.0%
!!! TTGTGTATTATAATTTGTTT+AGG + chr1_3:46454314-46454333 Msa0121050:intron 15.0%
!!! TGTGTATTATAATTTGTTTA+GGG + chr1_3:46454315-46454334 Msa0121050:intron 15.0%
!!! TTTTTAAAGATACAAATTAG+TGG + chr1_3:46455073-46455092 Msa0121050:intron 15.0%
!!! ATGATATATGTAATCATTTT+TGG + chr1_3:46456398-46456417 Msa0121050:intron 15.0%
!!! TGATATATGTAATCATTTTT+GGG + chr1_3:46456399-46456418 Msa0121050:intron 15.0%
!!! ATTTTCTTCTTTATTCTTTT+GGG + chr1_3:46456439-46456458 Msa0121050:intron 15.0%
!! TAAGAATAAGAAATAAAAAG+TGG + chr1_3:46457126-46457145 Msa0121050:intron 15.0%
!! ATATTTAGTGAAGATATCAA+AGG + chr1_3:46453092-46453111 Msa0121050:CDS 20.0%
!! TATTTAGTGAAGATATCAAA+GGG + chr1_3:46453093-46453112 Msa0121050:CDS 20.0%
!! ATAGAAAATCAATTTCTGAA+TGG + chr1_3:46453125-46453144 Msa0121050:CDS 20.0%
!!! TTAACTATAACTAAGTTTTG+TGG - chr1_3:46453377-46453396 None:intergenic 20.0%
!!! AATTTGTAATTTGTCTGTAA+AGG + chr1_3:46453430-46453449 Msa0121050:intron 20.0%
!!! ATTTGTAATTTGTCTGTAAA+GGG + chr1_3:46453431-46453450 Msa0121050:intron 20.0%
!!! TAGTCTTTATTTTGCATTTA+TGG + chr1_3:46453579-46453598 Msa0121050:intron 20.0%
!!! AAATGAGTTTTTTTAGTCAT+TGG - chr1_3:46453621-46453640 None:intergenic 20.0%
!!! TTTTGTGTTTTGATTGATAA+AGG + chr1_3:46453866-46453885 Msa0121050:intron 20.0%
!!! GTGTATTATAATTTGTTTAG+GGG + chr1_3:46454316-46454335 Msa0121050:intron 20.0%
!! TACTTATAATTATGAAGAGA+AGG - chr1_3:46454504-46454523 None:intergenic 20.0%
!! TCTCTTCATAATTATAAGTA+TGG + chr1_3:46454504-46454523 Msa0121050:intron 20.0%
!!! AAACAACACGTATTTTAAAA+CGG + chr1_3:46454968-46454987 Msa0121050:intron 20.0%
!! CAAAATTTAACCTAAAACAA+TGG + chr1_3:46455346-46455365 Msa0121050:intron 20.0%
!! AATTAGTAGATATACTTACA+AGG - chr1_3:46455398-46455417 None:intergenic 20.0%
!! AGTATATCTACTAATTTGAT+AGG + chr1_3:46455402-46455421 Msa0121050:intron 20.0%
!!! AATGTTTTTTTGTCAATGAA+TGG + chr1_3:46455441-46455460 Msa0121050:intron 20.0%
!!! ATGTTTTTTTGTCAATGAAT+GGG + chr1_3:46455442-46455461 Msa0121050:intron 20.0%
!! TCCCTCAAAAAAATTAATAT+AGG + chr1_3:46455470-46455489 Msa0121050:intron 20.0%
!!! CCCTATATTAATTTTTTTGA+GGG - chr1_3:46455474-46455493 None:intergenic 20.0%
!! CCCTCAAAAAAATTAATATA+GGG + chr1_3:46455471-46455490 Msa0121050:intron 20.0%
!!! TCCCTATATTAATTTTTTTG+AGG - chr1_3:46455475-46455494 None:intergenic 20.0%
!! ATACTATATTGTAATTGTTG+AGG - chr1_3:46455622-46455641 None:intergenic 20.0%
!! TTAATTAAAATGTAGGAAAG+TGG + chr1_3:46455662-46455681 Msa0121050:intron 20.0%
!! TTAAACTTACAACTAACTAA+TGG - chr1_3:46456035-46456054 None:intergenic 20.0%
!! TTAGTTAGTTGTAAGTTTAA+TGG + chr1_3:46456035-46456054 Msa0121050:intron 20.0%
!! GTAATCAGATATCATATAAT+TGG + chr1_3:46456145-46456164 Msa0121050:intron 20.0%
!!! TTAGTTTTGTCTTAACTAAT+AGG + chr1_3:46456313-46456332 Msa0121050:intron 20.0%
!! TCTCTATAAATAAATCGTTA+TGG - chr1_3:46456377-46456396 None:intergenic 20.0%
!!! CATTTTCTTCTTTATTCTTT+TGG + chr1_3:46456438-46456457 Msa0121050:intron 20.0%
!!! GAAAAAAAAATCACGAATTT+TGG - chr1_3:46456854-46456873 None:intergenic 20.0%
!! AATAAGAAATAAAAAGTGGT+GGG + chr1_3:46457130-46457149 Msa0121050:intron 20.0%
!! AAAAAATTTCCCATTGTATA+TGG + chr1_3:46457269-46457288 Msa0121050:intron 20.0%
!!! ATATTGGTACAAACTTATTT+TGG - chr1_3:46457314-46457333 None:intergenic 20.0%
!! TCTTAAAAAATATGTGTAGA+TGG - chr1_3:46457447-46457466 None:intergenic 20.0%
! ATTTAGTGAAGATATCAAAG+GGG + chr1_3:46453094-46453113 Msa0121050:CDS 25.0%
! AAATCAGAGAAATCTATGAT+TGG - chr1_3:46453272-46453291 None:intergenic 25.0%
!! ATAGATTTCTCTGATTTGAT+TGG + chr1_3:46453275-46453294 Msa0121050:CDS 25.0%
!!! ACAATTTTTTTTTGCTAAGC+CGG - chr1_3:46453525-46453544 None:intergenic 25.0%
!!! TGCAACATGCAATATTTTTA+GGG - chr1_3:46453743-46453762 None:intergenic 25.0%
!!! ATTTTTTGATCTTCCATTTG+AGG + chr1_3:46453947-46453966 Msa0121050:CDS 25.0%
! CATAATCATATAATAAGTCC+TGG + chr1_3:46454258-46454277 Msa0121050:intron 25.0%
! TATTAGGTATCCATTTACAA+TGG - chr1_3:46454364-46454383 None:intergenic 25.0%
! AATCAACCAACTTTCTTAAT+TGG + chr1_3:46454421-46454440 Msa0121050:intron 25.0%
! TTTGTACCAATTAAGAAAGT+TGG - chr1_3:46454430-46454449 None:intergenic 25.0%
! AATTATTTAGAGGACACAAT+TGG - chr1_3:46454839-46454858 None:intergenic 25.0%
!! ACAAATTAGTGGTCTTAATT+AGG + chr1_3:46455084-46455103 Msa0121050:intron 25.0%
! ATTAGGTTATGTTTGGTAAA+AGG + chr1_3:46455101-46455120 Msa0121050:intron 25.0%
!! TGTGAAGTTTGAAATCTTAA+AGG + chr1_3:46455141-46455160 Msa0121050:intron 25.0%
!!! AAACCAAACACTTATTTCTA+AGG + chr1_3:46455703-46455722 Msa0121050:CDS 25.0%
! TAACCTTAGAAATAAGTGTT+TGG - chr1_3:46455709-46455728 None:intergenic 25.0%
!!! ACACTTATTTCTAAGGTTAA+TGG + chr1_3:46455710-46455729 Msa0121050:CDS 25.0%
! GGACAATATTATCAAAGAAT+TGG + chr1_3:46455782-46455801 Msa0121050:CDS 25.0%
! ATTATCAAAGAATTGGAAGA+TGG + chr1_3:46455789-46455808 Msa0121050:CDS 25.0%
! TTATCAAAGAATTGGAAGAT+GGG + chr1_3:46455790-46455809 Msa0121050:CDS 25.0%
! ACAACGAATGCATTATTAAT+AGG - chr1_3:46455975-46455994 None:intergenic 25.0%
! CATAAAACAATAAACTCTCA+TGG + chr1_3:46456204-46456223 Msa0121050:intron 25.0%
! ATGAAATTCTGATATTCCAA+TGG + chr1_3:46456282-46456301 Msa0121050:intron 25.0%
! AAAACTAAAGAATCTACCAT+TGG - chr1_3:46456301-46456320 None:intergenic 25.0%
! GAATAAGAAATAAAAAGTGG+TGG + chr1_3:46457129-46457148 Msa0121050:intron 25.0%
! ATAAGAAATAAAAAGTGGTG+GGG + chr1_3:46457131-46457150 Msa0121050:intron 25.0%
!! TCTTTTAGACCATATACAAT+GGG - chr1_3:46457281-46457300 None:intergenic 25.0%
!!! TGCTTTGTTGTTAGAAATTT+TGG - chr1_3:46457600-46457619 None:intergenic 25.0%
! ATCTTACCATTGAGTTAAAA+TGG + chr1_3:46457625-46457644 Msa0121050:intron 25.0%
! GAAGAATTAGCAACTTAAAT+AGG - chr1_3:46457777-46457796 None:intergenic 25.0%
TCACTAAATATTGTCATTCC+AGG - chr1_3:46453083-46453102 None:intergenic 30.0%
GAATCTTCAGTATTCTTAAC+AGG - chr1_3:46453221-46453240 None:intergenic 30.0%
AAGCATTAGCTAATGATTGA+AGG - chr1_3:46453319-46453338 None:intergenic 30.0%
!!! CAATTTTTTTTTGCTAAGCC+GGG - chr1_3:46453524-46453543 None:intergenic 30.0%
! GTGCAACATGCAATATTTTT+AGG - chr1_3:46453744-46453763 None:intergenic 30.0%
!!! TGTGTTTTGATTGATAAAGG+TGG + chr1_3:46453869-46453888 Msa0121050:intron 30.0%
AGATGTTATCAACAACATGA+TGG + chr1_3:46453911-46453930 Msa0121050:CDS 30.0%
!! CAAAAGACAAAGTGTTTTGT+TGG + chr1_3:46454036-46454055 Msa0121050:CDS 30.0%
TAATCAATTCAATCTCTACG+TGG + chr1_3:46454176-46454195 Msa0121050:intron 30.0%
CTCTTCAATAAATTAGTACC+AGG - chr1_3:46454279-46454298 None:intergenic 30.0%
TTGGTACAAATTTGTCAATG+AGG + chr1_3:46454440-46454459 Msa0121050:intron 30.0%
AACAAATGCAGCACTTATTA+AGG + chr1_3:46454534-46454553 Msa0121050:intron 30.0%
AAATGTTAAAGAATGCCCAT+AGG - chr1_3:46454680-46454699 None:intergenic 30.0%
!! AAACGACACTCATTTTGAAA+CGG - chr1_3:46454748-46454767 None:intergenic 30.0%
! AGTGTCACTCAATTATTTAG+AGG - chr1_3:46454849-46454868 None:intergenic 30.0%
GGTCTTAATTAGGTTATGTT+TGG + chr1_3:46455094-46455113 Msa0121050:intron 30.0%
! TATTTTCTTCTGCTAACAGA+TGG - chr1_3:46455244-46455263 None:intergenic 30.0%
ATATCATCACTAGTACGTAA+TGG + chr1_3:46455297-46455316 Msa0121050:intron 30.0%
ATTAAAATGTAGGAAAGTGG+CGG + chr1_3:46455665-46455684 Msa0121050:intron 30.0%
TATACCTAAACTCTCTACTA+TGG - chr1_3:46455739-46455758 None:intergenic 30.0%
! ATTGTCCTTTTCTTCTTTGT+TGG - chr1_3:46455769-46455788 None:intergenic 30.0%
!!! TCATTTTTGGGACAACTTTT+AGG + chr1_3:46456411-46456430 Msa0121050:intron 30.0%
GAGTATAAGACCATTTACAA+TGG + chr1_3:46456504-46456523 Msa0121050:intron 30.0%
ATTCAACAAGCCATTGTAAA+TGG - chr1_3:46456517-46456536 None:intergenic 30.0%
AACATGTTGAAACCATTGTA+GGG + chr1_3:46456546-46456565 Msa0121050:intron 30.0%
GTTATTGAAAATGAGAGAAG+AGG + chr1_3:46456570-46456589 Msa0121050:intron 30.0%
AAACATGTTGAATATCTGAC+CGG + chr1_3:46456613-46456632 Msa0121050:intron 30.0%
TTTCTCTACAAATAGAGACT+TGG + chr1_3:46456870-46456889 Msa0121050:intron 30.0%
ACTTAAGAGAGTGAAAAACT+TGG - chr1_3:46456924-46456943 None:intergenic 30.0%
! TTCAATTTTTACCACTCCAA+TGG - chr1_3:46457175-46457194 None:intergenic 30.0%
TTGGAGTGGTAAAAATTGAA+TGG + chr1_3:46457175-46457194 Msa0121050:intron 30.0%
TGGAGTGGTAAAAATTGAAT+GGG + chr1_3:46457176-46457195 Msa0121050:intron 30.0%
TTAAGAGAGAGAAAATGATG+TGG + chr1_3:46457206-46457225 Msa0121050:intron 30.0%
! CTCTTTTAGACCATATACAA+TGG - chr1_3:46457282-46457301 None:intergenic 30.0%
GGCAAGAAAAGTTTCAAAAT+CGG - chr1_3:46457983-46458002 None:intergenic 30.0%
ATATTGCATAACATGTCACC+TGG + chr1_3:46453062-46453081 Msa0121050:CDS 35.0%
!! AGTTGATAATGGACTTCGTA+CGG + chr1_3:46453160-46453179 Msa0121050:CDS 35.0%
!!! GGAGGAAGTATGTACTTTTT+TGG - chr1_3:46453188-46453207 None:intergenic 35.0%
! AATCTATGATTGGTAGCTGT+AGG - chr1_3:46453262-46453281 None:intergenic 35.0%
! CTGATTTGATTGGTCCAAAT+AGG + chr1_3:46453285-46453304 Msa0121050:CDS 35.0%
! TGAACGTTATGGATTTTTCC+AGG + chr1_3:46453340-46453359 Msa0121050:intron 35.0%
TTGATAAAGGTGGTAAACCA+TGG + chr1_3:46453879-46453898 Msa0121050:intron 35.0%
TGATAAAGGTGGTAAACCAT+GGG + chr1_3:46453880-46453899 Msa0121050:intron 35.0%
TACTTACCTCTTTCCTCAAA+TGG - chr1_3:46453963-46453982 None:intergenic 35.0%
AAATACACACCTTAAGTCCA+CGG - chr1_3:46454126-46454145 None:intergenic 35.0%
GATAGTTGGTCCATTGTAAA+TGG + chr1_3:46454351-46454370 Msa0121050:intron 35.0%
!! ACCTAAAACAATGGTTTTGC+TGG + chr1_3:46455355-46455374 Msa0121050:intron 35.0%
TGAAGCCAACAAAGAAGAAA+AGG + chr1_3:46455761-46455780 Msa0121050:CDS 35.0%
AAGTCCAATTCCAAGAACAA+TGG + chr1_3:46455937-46455956 Msa0121050:CDS 35.0%
TGAACCATTGTTCTTGGAAT+TGG - chr1_3:46455944-46455963 None:intergenic 35.0%
ATTCCAAGAACAATGGTTCA+CGG + chr1_3:46455944-46455963 Msa0121050:CDS 35.0%
AATGCATTCGTTGTCAATGT+TGG + chr1_3:46455981-46456000 Msa0121050:CDS 35.0%
AAAACACTAGAGAGAGAAAG+AGG + chr1_3:46456464-46456483 Msa0121050:intron 35.0%
AAACACTAGAGAGAGAAAGA+GGG + chr1_3:46456465-46456484 Msa0121050:intron 35.0%
CAACATGTTGAAACCATTGT+AGG + chr1_3:46456545-46456564 Msa0121050:intron 35.0%
ACATGTTGAAACCATTGTAG+GGG + chr1_3:46456547-46456566 Msa0121050:intron 35.0%
! TTTTCAATAACCCCCTACAA+TGG - chr1_3:46456561-46456580 None:intergenic 35.0%
AACATGTTGAATATCTGACC+GGG + chr1_3:46456614-46456633 Msa0121050:intron 35.0%
ATTCATAAAGCTGTGACACT+TGG + chr1_3:46456736-46456755 Msa0121050:intron 35.0%
GAGACTTGGATCATTTGATT+TGG + chr1_3:46456884-46456903 Msa0121050:intron 35.0%
! AAATAAAAAGTGGTGGGGTA+GGG + chr1_3:46457136-46457155 Msa0121050:intron 35.0%
TTGAATGTTTACCATTGGAG+TGG + chr1_3:46457161-46457180 Msa0121050:intron 35.0%
! AGAAAATGATGTGGAGTGTT+GGG + chr1_3:46457215-46457234 Msa0121050:intron 35.0%
! AGTGTTGGGAATTGAAAAAG+TGG + chr1_3:46457229-46457248 Msa0121050:intron 35.0%
GTGTTGGGAATTGAAAAAGT+GGG + chr1_3:46457230-46457249 Msa0121050:intron 35.0%
!! ATTGAAAAAGTGGGTGTTGA+AGG + chr1_3:46457239-46457258 Msa0121050:intron 35.0%
ACCATTGAGTTAAAATGGCA+TGG + chr1_3:46457630-46457649 Msa0121050:intron 35.0%
!!! TCCATGCCATTTTAACTCAA+TGG - chr1_3:46457634-46457653 None:intergenic 35.0%
!!! GCTTCTCAGATTTTTAGCAA+CGG + chr1_3:46457808-46457827 Msa0121050:intron 35.0%
!!! CTTCTCAGATTTTTAGCAAC+GGG + chr1_3:46457809-46457828 Msa0121050:intron 35.0%
! AATACAAGAGTGTGCTACAT+AGG + chr1_3:46457833-46457852 Msa0121050:CDS 35.0%
! ATACAAGAGTGTGCTACATA+GGG + chr1_3:46457834-46457853 Msa0121050:CDS 35.0%
AATGCTATGCAATGAAGCAA+TGG - chr1_3:46457890-46457909 None:intergenic 35.0%
! AACCAAGAGAAAGAGTTTTC+TGG + chr1_3:46458020-46458039 Msa0121050:CDS 35.0%
!! GTGAAGCAGCTAGTTGATAA+TGG + chr1_3:46453149-46453168 Msa0121050:CDS 40.0%
TTCTTAACAGGACGTTCAGA+AGG - chr1_3:46453209-46453228 None:intergenic 40.0%
!!! TGGTAGCTGTAGGTTTTGTT+TGG - chr1_3:46453252-46453271 None:intergenic 40.0%
GCTAATGATTGAAGGACTTG+AGG - chr1_3:46453311-46453330 None:intergenic 40.0%
GCTAATGCTTGTGAACGTTA+TGG + chr1_3:46453329-46453348 Msa0121050:intron 40.0%
! GTAAAGGGTATGAGTGTCTT+CGG + chr1_3:46453446-46453465 Msa0121050:intron 40.0%
! TAAAGGGTATGAGTGTCTTC+GGG + chr1_3:46453447-46453466 Msa0121050:intron 40.0%
! TTGATACCTGTCATTTCTCC+CGG + chr1_3:46453503-46453522 Msa0121050:intron 40.0%
!! TAACATCTTCTGAGATCCCA+TGG - chr1_3:46453899-46453918 None:intergenic 40.0%
!! AACAACATGATGGATGTGTG+TGG + chr1_3:46453921-46453940 Msa0121050:CDS 40.0%
GATCTTCCATTTGAGGAAAG+AGG + chr1_3:46453954-46453973 Msa0121050:CDS 40.0%
GAAGATAATCAGGCAAAGGA+TGG - chr1_3:46454085-46454104 None:intergenic 40.0%
AATACACACCTTAAGTCCAC+GGG - chr1_3:46454125-46454144 None:intergenic 40.0%
TGTTTAGGGGACAAGTTCTA+CGG + chr1_3:46454329-46454348 Msa0121050:intron 40.0%
! TGTCAATGAGGTCTTATACC+TGG + chr1_3:46454452-46454471 Msa0121050:intron 40.0%
! GTCAATGAGGTCTTATACCT+GGG + chr1_3:46454453-46454472 Msa0121050:intron 40.0%
! CCATAGGACATTGGTTAAGA+GGG - chr1_3:46454664-46454683 None:intergenic 40.0%
CCTCTTAACCAATGTCCTAT+GGG + chr1_3:46454662-46454681 Msa0121050:intron 40.0%
AAAGAATGCCCATAGGACAT+TGG - chr1_3:46454673-46454692 None:intergenic 40.0%
ATCATTGTCACAGATGTGCT+TGG - chr1_3:46455190-46455209 None:intergenic 40.0%
! GCCAGCAAAACCATTGTTTT+AGG - chr1_3:46455359-46455378 None:intergenic 40.0%
GAAGCCATAGTAGAGAGTTT+AGG + chr1_3:46455732-46455751 Msa0121050:CDS 40.0%
AAAAATTTGCCGCCATAAGC+TGG - chr1_3:46455818-46455837 None:intergenic 40.0%
AATCCATAGTCAGAATGAGG+GGG - chr1_3:46455879-46455898 None:intergenic 40.0%
GAATCCATAGTCAGAATGAG+GGG - chr1_3:46455880-46455899 None:intergenic 40.0%
GGAATCCATAGTCAGAATGA+GGG - chr1_3:46455881-46455900 None:intergenic 40.0%
AGGAATCCATAGTCAGAATG+AGG - chr1_3:46455882-46455901 None:intergenic 40.0%
CTTCTTCAAGATGAGGTAGA+GGG + chr1_3:46455909-46455928 Msa0121050:CDS 40.0%
GAATATCCATCCATACCTCA+AGG - chr1_3:46456013-46456032 None:intergenic 40.0%
GGTCACTAATTGTAGATGAC+AGG - chr1_3:46456356-46456375 None:intergenic 40.0%
CATGTTGAAACCATTGTAGG+GGG + chr1_3:46456548-46456567 Msa0121050:intron 40.0%
AAAATGAGAGAAGAGGAGAG+AGG + chr1_3:46456577-46456596 Msa0121050:intron 40.0%
AGCTTGCATTGGACTGAAAA+TGG + chr1_3:46456650-46456669 Msa0121050:intron 40.0%
! GAAATAAAAAGTGGTGGGGT+AGG + chr1_3:46457135-46457154 Msa0121050:intron 40.0%
!! GGGTGTTGAATGTTTACCAT+TGG + chr1_3:46457156-46457175 Msa0121050:intron 40.0%
GAGAAAATGATGTGGAGTGT+TGG + chr1_3:46457214-46457233 Msa0121050:intron 40.0%
TTGTCAATGAGTGTAGGTGA+CGG - chr1_3:46457934-46457953 None:intergenic 40.0%
!! TTGGCTTTGTCAATGAGTGT+AGG - chr1_3:46457940-46457959 None:intergenic 40.0%
! GGTTTCGTTGGTTGAAATGT+GGG - chr1_3:46458004-46458023 None:intergenic 40.0%
! TGGTTTCGTTGGTTGAAATG+TGG - chr1_3:46458005-46458024 None:intergenic 40.0%
ACTCTTTCTCTTGGTTTCGT+TGG - chr1_3:46458016-46458035 None:intergenic 40.0%
CTCCAGAAAACTCTTTCTCT+TGG - chr1_3:46458025-46458044 None:intergenic 40.0%
!!! GAAAGAGTTTTCTGGAGTCT+AGG + chr1_3:46458028-46458047 Msa0121050:CDS 40.0%
TTAACAGGACGTTCAGAAGG+AGG - chr1_3:46453206-46453225 None:intergenic 45.0%
TGAAGGACTTGAGGCCTATT+TGG - chr1_3:46453302-46453321 None:intergenic 45.0%
TTTGTGGTTGATTGCTCACC+TGG - chr1_3:46453361-46453380 None:intergenic 45.0%
! AAAGGGTATGAGTGTCTTCG+GGG + chr1_3:46453448-46453467 Msa0121050:intron 45.0%
GGGAGAAATGACAGGTATCA+AGG - chr1_3:46453504-46453523 None:intergenic 45.0%
ATGAGAGCAGCAGTTCGATA+TGG + chr1_3:46453996-46454015 Msa0121050:CDS 45.0%
TGGGGAAGATAATCAGGCAA+AGG - chr1_3:46454089-46454108 None:intergenic 45.0%
TGCCTGATTATCTTCCCCAT+TGG + chr1_3:46454090-46454109 Msa0121050:CDS 45.0%
GGACAAGTTCTACGGATAGT+TGG + chr1_3:46454337-46454356 Msa0121050:intron 45.0%
! GAGGTCTTATACCTGGGAAA+TGG + chr1_3:46454459-46454478 Msa0121050:intron 45.0%
ACCTGGGAAATGGAAAGTAG+TGG + chr1_3:46454469-46454488 Msa0121050:intron 45.0%
ACCACTACTTTCCATTTCCC+AGG - chr1_3:46454473-46454492 None:intergenic 45.0%
CCCTCTTAACCAATGTCCTA+TGG + chr1_3:46454661-46454680 Msa0121050:intron 45.0%
! CCCATAGGACATTGGTTAAG+AGG - chr1_3:46454665-46454684 None:intergenic 45.0%
! TGCTGGCCTGATGATTCATA+CGG + chr1_3:46455372-46455391 Msa0121050:intron 45.0%
ACAAGGCCGTATGAATCATC+AGG - chr1_3:46455381-46455400 None:intergenic 45.0%
TTCCCAACAAAGTTGCAACG+AGG + chr1_3:46455560-46455579 Msa0121050:intron 45.0%
TCCCAACAAAGTTGCAACGA+GGG + chr1_3:46455561-46455580 Msa0121050:intron 45.0%
! GTGTTTGGTTTCTTCTGCGT+AGG - chr1_3:46455694-46455713 None:intergenic 45.0%
! CATCTTGAAGAAGGAGTGTG+AGG - chr1_3:46455902-46455921 None:intergenic 45.0%
CACACTCCTTCTTCAAGATG+AGG + chr1_3:46455902-46455921 Msa0121050:CDS 45.0%
CCTCTACCTCATCTTGAAGA+AGG - chr1_3:46455911-46455930 None:intergenic 45.0%
CCTTCTTCAAGATGAGGTAG+AGG + chr1_3:46455908-46455927 Msa0121050:CDS 45.0%
GAACCGTGAACCATTGTTCT+TGG - chr1_3:46455950-46455969 None:intergenic 45.0%
!! CAATGTTGGTGATCACCTTG+AGG + chr1_3:46455995-46456014 Msa0121050:CDS 45.0%
! TTGGTGATCACCTTGAGGTA+TGG + chr1_3:46456000-46456019 Msa0121050:intron 45.0%
TGATCACCTTGAGGTATGGA+TGG + chr1_3:46456004-46456023 Msa0121050:intron 45.0%
ATGTTGAATATCTGACCGGG+AGG + chr1_3:46456617-46456636 Msa0121050:intron 45.0%
GACACTTGGCATGTTACGAT+TGG + chr1_3:46456750-46456769 Msa0121050:intron 45.0%
!!! TAAAAACATATATTTTTTTA+AGG - chr1_3:46453401-46453420 None:intergenic 5.0%
!! TGTATAAATTAATAAAAATA+TGG + chr1_3:46453643-46453662 Msa0121050:intron 5.0%
!!! AAATTAAATAAATTTTTTGT+TGG + chr1_3:46453670-46453689 Msa0121050:intron 5.0%
!!! AATTAAATAAATTTTTTGTT+GGG + chr1_3:46453671-46453690 Msa0121050:intron 5.0%
!!! ATTTATTTTTTAGTTTTTTT+TGG - chr1_3:46457032-46457051 None:intergenic 5.0%
!!! ATTATTTATATTTTTATGAT+AGG - chr1_3:46457417-46457436 None:intergenic 5.0%
!! TTTATTTCATATAAAATTTA+TGG - chr1_3:46457485-46457504 None:intergenic 5.0%
! TTCGGGGTGTCAACCTAGTT+GGG + chr1_3:46453464-46453483 Msa0121050:intron 50.0%
GGCCAATGGGGAAGATAATC+AGG - chr1_3:46454095-46454114 None:intergenic 50.0%
CTTAAGTCCACGGGTGAATC+AGG - chr1_3:46454116-46454135 None:intergenic 50.0%
CTGATTCACCCGTGGACTTA+AGG + chr1_3:46454114-46454133 Msa0121050:CDS 50.0%
GCCCTCGTTGCAACTTTGTT+GGG - chr1_3:46455565-46455584 None:intergenic 50.0%
TGCCCTCGTTGCAACTTTGT+TGG - chr1_3:46455566-46455585 None:intergenic 50.0%
!! GTTAGGTCAGGTTGAGGACA+TGG - chr1_3:46455846-46455865 None:intergenic 50.0%
CTCAACCTGACCTAACCCTA+GGG + chr1_3:46455850-46455869 Msa0121050:CDS 50.0%
ATGCCCCCTCATTCTGACTA+TGG + chr1_3:46455873-46455892 Msa0121050:CDS 50.0%
ATTGGACTGAAAATGGCGCG+TGG + chr1_3:46456657-46456676 Msa0121050:intron 50.0%
! AGCGTGGGAGAAGTTTTCTG+CGG + chr1_3:46456699-46456718 Msa0121050:intron 50.0%
! GCATGTTACGATTGGCTGCT+TGG + chr1_3:46456758-46456777 Msa0121050:intron 50.0%
! GTCTGCGTAACGTTTGGGAT+TGG - chr1_3:46457959-46457978 None:intergenic 50.0%
! TCGGTGTCTGCGTAACGTTT+GGG - chr1_3:46457964-46457983 None:intergenic 50.0%
! ATCGGTGTCTGCGTAACGTT+TGG - chr1_3:46457965-46457984 None:intergenic 50.0%
! CTTCGGGGTGTCAACCTAGT+TGG + chr1_3:46453463-46453482 Msa0121050:intron 55.0%
GAGTCGTCGACATCCCAACT+AGG - chr1_3:46453480-46453499 None:intergenic 55.0%
GCTAAGCCGGGAGAAATGAC+AGG - chr1_3:46453512-46453531 None:intergenic 55.0%
ACGGGTGAATCAGGCCAATG+GGG - chr1_3:46454107-46454126 None:intergenic 55.0%
CACGGGTGAATCAGGCCAAT+GGG - chr1_3:46454108-46454127 None:intergenic 55.0%
GGAAGATGGGAGCCAGCTTA+TGG + chr1_3:46455803-46455822 Msa0121050:CDS 55.0%
AGATGGGAGCCAGCTTATGG+CGG + chr1_3:46455806-46455825 Msa0121050:CDS 55.0%
!! AGGTCAGGTTGAGGACATGG+TGG - chr1_3:46455843-46455862 None:intergenic 55.0%
! CCTAGGGTTAGGTCAGGTTG+AGG - chr1_3:46455852-46455871 None:intergenic 55.0%
CCTCAACCTGACCTAACCCT+AGG + chr1_3:46455849-46455868 Msa0121050:CDS 55.0%
!! AGAATGAGGGGGCATCCCTA+GGG - chr1_3:46455868-46455887 None:intergenic 55.0%
GACACGTGGCAAGCTTGCAT+TGG + chr1_3:46456639-46456658 Msa0121050:intron 55.0%
CCACGGGTGAATCAGGCCAA+TGG - chr1_3:46454109-46454128 None:intergenic 60.0%
! CCATTGGCCTGATTCACCCG+TGG + chr1_3:46454106-46454125 Msa0121050:CDS 60.0%
GGCATCCCTAGGGTTAGGTC+AGG - chr1_3:46455858-46455877 None:intergenic 60.0%
!! CAGAATGAGGGGGCATCCCT+AGG - chr1_3:46455869-46455888 None:intergenic 60.0%
TATCTGACCGGGAGGACACG+TGG + chr1_3:46456625-46456644 Msa0121050:intron 60.0%
AAGCTTGCCACGTGTCCTCC+CGG - chr1_3:46456635-46456654 None:intergenic 60.0%
!! GAGGGGGCATCCCTAGGGTT+AGG - chr1_3:46455863-46455882 None:intergenic 65.0%
GTGGCATGCACGCGCAGACA+GGG + chr1_3:46456676-46456695 Msa0121050:intron 65.0%
CGTGGCATGCACGCGCAGAC+AGG + chr1_3:46456675-46456694 Msa0121050:intron 70.0%
! CACGCGCAGACAGGGAGCGT+GGG + chr1_3:46456684-46456703 Msa0121050:intron 70.0%
GCACGCGCAGACAGGGAGCG+TGG + chr1_3:46456683-46456702 Msa0121050:intron 75.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 46453059 46458080 46453059 ID=Msa0121050;Name=Msa0121050
chr1_3 mRNA 46453059 46458080 46453059 ID=Msa0121050-mRNA-1;Parent=Msa0121050;Name=Msa0121050-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0|0|1|1|1|4|0|368
chr1_3 exon 46453059 46453313 46453059 ID=Msa0121050-mRNA-1:exon:13993;Parent=Msa0121050-mRNA-1
chr1_3 exon 46453888 46454135 46453888 ID=Msa0121050-mRNA-1:exon:13994;Parent=Msa0121050-mRNA-1
chr1_3 exon 46455677 46456016 46455677 ID=Msa0121050-mRNA-1:exon:13995;Parent=Msa0121050-mRNA-1
chr1_3 exon 46457817 46458080 46457817 ID=Msa0121050-mRNA-1:exon:13996;Parent=Msa0121050-mRNA-1
chr1_3 CDS 46453059 46453313 46453059 ID=Msa0121050-mRNA-1:cds;Parent=Msa0121050-mRNA-1
chr1_3 CDS 46453888 46454135 46453888 ID=Msa0121050-mRNA-1:cds;Parent=Msa0121050-mRNA-1
chr1_3 CDS 46455677 46456016 46455677 ID=Msa0121050-mRNA-1:cds;Parent=Msa0121050-mRNA-1
chr1_3 CDS 46457817 46458080 46457817 ID=Msa0121050-mRNA-1:cds;Parent=Msa0121050-mRNA-1
Gene Sequence

>Msa0121050

GATATATTGCATAACATGTCACCTGGAATGACAATATTTAGTGAAGATATCAAAGGGGTCGATGATATAGAAAATCAATTTCTGAATGGAGTGAAGCAGCTAGTTGATAATGGACTTCGTACGGTACCAAAAAAGTACATACTTCCTCCTTCTGAACGTCCTGTTAAGAATACTGAAGATTCAAATTTTGCCAAACAAAACCTACAGCTACCAATCATAGATTTCTCTGATTTGATTGGTCCAAATAGGCCTCAAGTGGTAAACCATGGGATCTCAGAAGATGTTATCAACAACATGATGGATGTGTGTGGAAAATTTTTTGATCTTCCATTTGAGGAAAGAGGTAAGTACATGACATCTGATATGAGAGCAGCAGTTCGATATGGAACTAGCTTTAGTCAAACAAAAGACAAAGTGTTTTGTTGGAGAGATTTCTTGAAACTTATCTGCCATCCTTTGCCTGATTATCTTCCCCATTGGCCTGATTCACCCGTGGACTTAAGGAAAGTGGCGGCTACCTACGCAGAAGAAACCAAACACTTATTTCTAAGGTTAATGGAAGCCATAGTAGAGAGTTTAGGTATAGTTGAAGCCAACAAAGAAGAAAAGGACAATATTATCAAAGAATTGGAAGATGGGAGCCAGCTTATGGCGGCAAATTTTTATCCACCATGTCCTCAACCTGACCTAACCCTAGGGATGCCCCCTCATTCTGACTATGGATTCCTCACACTCCTTCTTCAAGATGAGGTAGAGGGTTTGCAAGTCCAATTCCAAGAACAATGGTTCACGGTTCAACCTATTAATAATGCATTCGTTGTCAATGTTGGTGATCACCTTGAGATTTTTAGCAACGGGAAATACAAGAGTGTGCTACATAGGGTTCTAGTGAATTCAAGTAAGCGTAGAAGATCCATTGCTTCATTGCATAGCATTTCGTTCAACAGTACTGTGAGACCGTCACCTACACTCATTGACAAAGCCAATCCCAAACGTTACGCAGACACCGATTTTGAAACTTTTCTTGCCCACATTTCAACCAACGAAACCAAGAGAAAGAGTTTTCTGGAGTCTAGGAAATTGACTTCTATCTCAGTACTTGACTAA
Protein sequence

>Msa0121050

DILHNMSPGMTIFSEDIKGVDDIENQFLNGVKQLVDNGLRTVPKKYILPPSERPVKNTEDSNFAKQNLQLPIIDFSDLIGPNRPQVVNHGISEDVINNMMDVCGKFFDLPFEERGKYMTSDMRAAVRYGTSFSQTKDKVFCWRDFLKLICHPLPDYLPHWPDSPVDLRKVAATYAEETKHLFLRLMEAIVESLGIVEANKEEKDNIIKELEDGSQLMAANFYPPCPQPDLTLGMPPHSDYGFLTLLLQDEVEGLQVQFQEQWFTVQPINNAFVVNVGDHLEIFSNGKYKSVLHRVLVNSSKRRRSIASLHSISFNSTVRPSPTLIDKANPKRYADTDFETFLAHISTNETKRKSFLESRKLTSISVLD*