AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0594320


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0594320 MtrunA17_Chr4g0013171 94.393 321 18 0 1 321 1 321 0.0 635
Msa0594320 MtrunA17_Chr4g0013181 86.916 321 42 0 1 321 33 353 0.0 560
Msa0594320 MtrunA17_Chr5g0432341 59.692 325 123 5 1 321 1 321 7.75e-133 380
Msa0594320 MtrunA17_Chr5g0432331 59.937 317 121 4 9 321 38 352 1.15e-132 381
Msa0594320 MtrunA17_Chr5g0432441 60.372 323 124 2 2 321 5 326 1.12e-131 377
Msa0594320 MtrunA17_Chr5g0432351 58.462 325 127 5 1 321 1 321 1.84e-131 377
Msa0594320 MtrunA17_Chr3g0106921 58.280 314 127 3 11 321 8 320 5.20e-124 358
Msa0594320 MtrunA17_Chr3g0114451 57.407 324 129 5 1 321 1 318 3.51e-123 356
Msa0594320 MtrunA17_Chr3g0107881 56.442 326 135 5 1 321 1 324 6.59e-122 353
Msa0594320 MtrunA17_Chr5g0438021 55.591 313 134 4 11 321 16 325 7.13e-120 347
Msa0594320 MtrunA17_Chr3g0129051 54.777 314 138 3 10 321 11 322 1.59e-119 347
Msa0594320 MtrunA17_Chr7g0244461 58.644 295 120 2 27 321 20 312 1.66e-119 346
Msa0594320 MtrunA17_Chr2g0320061 55.096 314 138 3 9 321 7 318 1.68e-117 341
Msa0594320 MtrunA17_Chr7g0244451 57.143 308 130 2 14 321 11 316 9.18e-117 339
Msa0594320 MtrunA17_Chr2g0320031 55.238 315 137 4 9 321 7 319 9.72e-117 339
Msa0594320 MtrunA17_Chr4g0013201 54.545 308 138 2 14 321 33 338 1.94e-116 339
Msa0594320 MtrunA17_Chr2g0320071 52.532 316 148 2 6 321 4 317 1.17e-115 337
Msa0594320 MtrunA17_Chr4g0043391 53.681 326 144 5 1 321 1 324 1.46e-114 334
Msa0594320 MtrunA17_Chr2g0320101 52.532 316 148 2 6 321 4 317 2.27e-114 333
Msa0594320 MtrunA17_Chr2g0320051 53.822 314 142 3 9 321 7 318 5.87e-114 332
Msa0594320 MtrunA17_Chr3g0106901 54.517 321 144 2 1 321 5 323 1.13e-113 332
Msa0594320 MtrunA17_Chr3g0129061 54.938 324 141 4 1 321 1 322 2.68e-113 331
Msa0594320 MtrunA17_Chr4g0038161 53.231 325 143 5 1 321 1 320 5.57e-113 330
Msa0594320 MtrunA17_Chr3g0129041 56.731 312 130 4 13 321 13 322 1.44e-112 329
Msa0594320 MtrunA17_Chr2g0320091 52.050 317 149 3 6 321 4 318 2.01e-112 328
Msa0594320 MtrunA17_Chr4g0038151 52.778 324 144 6 3 321 2 321 2.62e-112 328
Msa0594320 MtrunA17_Chr4g0038171 53.674 313 138 5 14 321 11 321 1.42e-111 326
Msa0594320 MtrunA17_Chr5g0404721 54.785 303 127 4 27 321 30 330 9.10e-110 322
Msa0594320 MtrunA17_Chr4g0013191 54.949 293 128 3 31 321 50 340 1.91e-109 322
Msa0594320 MtrunA17_Chr1g0213061 51.125 311 146 4 14 321 14 321 2.36e-107 316
Msa0594320 MtrunA17_Chr7g0224371 52.716 313 145 3 9 321 13 322 2.62e-107 315
Msa0594320 MtrunA17_Chr8g0372601 53.443 305 132 4 25 321 28 330 1.30e-106 314
Msa0594320 MtrunA17_Chr5g0432401 49.842 317 111 6 11 320 10 285 3.31e-100 296
Msa0594320 MtrunA17_Chr1g0155611 50.492 305 140 4 26 321 45 347 9.12e-100 297
Msa0594320 MtrunA17_Chr7g0258811 47.130 331 161 6 1 321 45 371 3.62e-99 296
Msa0594320 MtrunA17_Chr4g0068621 50.163 307 145 4 21 321 32 336 4.54e-99 295
Msa0594320 MtrunA17_Chr2g0291751 48.949 333 155 6 1 321 1 330 1.06e-98 295
Msa0594320 MtrunA17_Chr4g0070951 49.091 330 153 5 3 321 4 329 1.17e-98 294
Msa0594320 MtrunA17_Chr5g0402571 45.897 329 164 5 1 321 4 326 1.00e-96 289
Msa0594320 MtrunA17_Chr5g0400331 51.456 309 133 5 27 321 26 331 1.51e-96 288
Msa0594320 MtrunA17_Chr2g0292151 47.799 318 155 4 13 321 15 330 5.67e-96 288
Msa0594320 MtrunA17_Chr1g0175561 46.749 323 156 6 9 321 10 326 9.54e-96 286
Msa0594320 MtrunA17_Chr2g0292271 47.516 322 156 5 11 321 11 330 4.24e-95 285
Msa0594320 MtrunA17_Chr5g0402581 46.012 326 161 5 4 321 8 326 5.81e-95 284
Msa0594320 MtrunA17_Chr2g0292211 46.914 324 161 4 7 321 20 341 1.05e-94 285
Msa0594320 MtrunA17_Chr2g0292181 47.799 318 155 4 13 321 24 339 1.24e-94 285
Msa0594320 MtrunA17_Chr2g0299691 49.511 307 139 5 27 321 56 358 1.53e-94 284
Msa0594320 MtrunA17_Chr2g0292241 47.484 318 156 4 13 321 15 330 3.44e-94 283
Msa0594320 MtrunA17_Chr2g0292251 48.355 304 146 4 27 321 28 329 1.64e-92 279
Msa0594320 MtrunA17_Chr2g0292261 46.855 318 158 4 13 321 15 330 2.28e-91 276
Msa0594320 MtrunA17_Chr2g0292091 45.714 315 158 5 17 321 14 325 3.60e-91 275
Msa0594320 MtrunA17_Chr2g0292111 46.541 318 159 4 13 321 15 330 4.80e-91 275
Msa0594320 MtrunA17_Chr2g0292291 45.455 319 162 5 13 321 16 332 5.29e-89 270
Msa0594320 MtrunA17_Chr4g0013721 46.926 309 152 5 20 321 93 396 8.28e-88 269
Msa0594320 MtrunA17_Chr2g0292101 45.455 319 161 5 13 321 11 326 2.21e-86 263
Msa0594320 MtrunA17_Chr5g0421411 49.655 290 126 8 47 321 1 285 4.86e-86 260
Msa0594320 MtrunA17_Chr4g0013821 44.375 320 164 6 9 321 12 324 4.98e-85 259
Msa0594320 MtrunA17_Chr2g0322861 42.679 321 171 7 10 321 70 386 2.86e-83 256
Msa0594320 MtrunA17_Chr1g0194151 43.202 331 173 6 4 321 5 333 1.41e-79 245
Msa0594320 MtrunA17_Chr6g0477071 40.000 315 175 7 14 321 35 342 1.72e-79 245
Msa0594320 MtrunA17_Chr8g0371381 42.857 308 161 7 21 321 20 319 2.58e-79 244
Msa0594320 MtrunA17_Chr1g0204011 42.121 330 171 10 1 321 4 322 1.12e-78 243
Msa0594320 MtrunA17_Chr5g0405991 41.693 319 170 8 10 321 7 316 9.27e-78 240
Msa0594320 MtrunA17_Chr4g0024121 39.514 329 186 6 1 321 3 326 1.49e-77 240
Msa0594320 MtrunA17_Chr1g0194271 43.068 339 169 7 4 321 5 340 1.60e-77 240
Msa0594320 MtrunA17_Chr7g0225221 41.121 321 175 7 9 321 6 320 1.21e-76 237
Msa0594320 MtrunA17_Chr2g0279041 40.979 327 174 7 7 321 6 325 3.31e-76 236
Msa0594320 MtrunA17_Chr3g0128061 40.506 316 178 4 14 321 13 326 4.76e-76 236
Msa0594320 MtrunA17_Chr1g0188431 41.554 296 165 6 27 321 39 327 5.72e-76 236
Msa0594320 MtrunA17_Chr1g0157051 41.139 316 171 7 9 317 7 314 2.17e-74 231
Msa0594320 MtrunA17_Chr1g0148021 39.879 331 186 7 1 321 1 328 2.31e-74 232
Msa0594320 MtrunA17_Chr7g0254231 40.878 296 168 5 27 321 22 311 1.77e-73 229
Msa0594320 MtrunA17_Chr4g0063671 40.625 320 171 6 14 321 8 320 9.48e-71 222
Msa0594320 MtrunA17_Chr1g0164891 41.722 302 163 6 31 321 93 392 1.54e-70 224
Msa0594320 MtrunA17_Chr6g0460711 37.421 318 183 7 9 321 8 314 4.97e-70 220
Msa0594320 MtrunA17_Chr3g0114461 56.614 189 80 2 134 321 5 192 2.27e-69 214
Msa0594320 MtrunA17_Chr1g0197411 38.298 329 188 8 6 321 4 330 1.76e-68 217
Msa0594320 MtrunA17_Chr7g0254201 37.624 303 177 5 24 321 17 312 2.73e-68 216
Msa0594320 MtrunA17_Chr7g0268501 37.963 324 187 7 5 321 4 320 5.66e-68 215
Msa0594320 MtrunA17_Chr7g0268521 37.963 324 187 7 5 321 4 320 5.66e-68 215
Msa0594320 MtrunA17_Chr2g0278671 41.558 308 163 6 25 321 22 323 6.11e-68 215
Msa0594320 MtrunA17_Chr6g0467161 37.462 331 192 7 1 321 11 336 3.47e-67 214
Msa0594320 MtrunA17_Chr4g0076211 37.353 340 178 9 6 321 5 333 6.21e-67 213
Msa0594320 MtrunA17_Chr4g0053871 37.578 322 194 5 1 317 1 320 8.49e-67 212
Msa0594320 MtrunA17_Chr5g0401431 36.562 320 189 6 8 317 10 325 3.35e-66 211
Msa0594320 MtrunA17_Chr2g0296621 42.244 303 156 8 27 321 50 341 8.87e-66 210
Msa0594320 MtrunA17_Chr4g0072091 39.145 304 172 6 27 321 24 323 8.90e-66 209
Msa0594320 MtrunA17_Chr4g0046131 40.317 315 174 7 15 317 30 342 2.01e-65 209
Msa0594320 MtrunA17_Chr2g0329641 38.871 319 176 7 15 321 24 335 1.40e-63 204
Msa0594320 MtrunA17_Chr8g0364291 36.308 325 195 6 6 321 3 324 7.50e-63 202
Msa0594320 MtrunA17_Chr2g0316791 38.323 334 164 8 25 319 74 404 1.89e-62 203
Msa0594320 MtrunA17_Chr6g0451571 35.913 323 194 7 7 321 17 334 1.32e-61 199
Msa0594320 MtrunA17_Chr2g0316481 37.725 334 166 8 25 319 74 404 7.22e-61 199
Msa0594320 MtrunA17_Chr2g0316831 37.725 334 166 8 25 319 110 440 1.15e-60 200
Msa0594320 MtrunA17_Chr6g0467121 36.593 317 192 6 7 321 54 363 1.39e-60 198
Msa0594320 MtrunA17_Chr6g0467251 37.710 297 179 5 27 321 36 328 2.10e-60 196
Msa0594320 MtrunA17_Chr2g0316191 37.612 335 166 8 25 319 74 405 3.44e-60 197
Msa0594320 MtrunA17_Chr2g0279061 43.511 262 130 6 71 321 12 266 6.29e-60 192
Msa0594320 MtrunA17_Chr3g0136751 37.461 323 187 4 8 321 6 322 6.06e-58 189
Msa0594320 MtrunA17_Chr4g0075241 34.219 301 190 4 27 321 29 327 4.34e-57 187
Msa0594320 MtrunA17_Chr2g0311251 36.716 335 169 9 25 320 9 339 9.31e-56 184
Msa0594320 MtrunA17_Chr2g0311241 32.512 406 183 11 2 320 28 429 3.25e-54 182
Msa0594320 MtrunA17_Chr1g0181431 34.323 303 191 5 24 321 24 323 2.19e-51 172
Msa0594320 MtrunA17_Chr1g0181511 35.430 302 187 5 25 321 25 323 2.74e-51 172
Msa0594320 MtrunA17_Chr4g0074851 34.106 302 191 5 25 321 30 328 5.85e-51 171
Msa0594320 MtrunA17_Chr1g0181481 35.430 302 187 5 25 321 25 323 6.30e-51 171
Msa0594320 MtrunA17_Chr5g0413051 32.248 307 194 6 27 321 73 377 3.46e-50 171
Msa0594320 MtrunA17_Chr2g0292281 44.340 212 96 5 120 321 17 216 9.26e-47 158
Msa0594320 MtrunA17_Chr5g0432321 62.712 118 42 2 149 266 17 132 1.80e-43 145
Msa0594320 MtrunA17_Chr3g0114491 64.545 110 38 1 27 136 18 126 1.01e-40 139
Msa0594320 MtrunA17_Chr2g0316141 36.431 269 146 8 73 319 11 276 2.46e-38 137
Msa0594320 MtrunA17_Chr2g0316181 36.431 269 146 8 73 319 11 276 2.46e-38 137
Msa0594320 MtrunA17_Chr4g0004591 28.037 321 162 6 27 320 77 355 3.70e-37 136
Msa0594320 MtrunA17_Chr2g0316811 33.333 288 135 9 25 258 48 332 1.88e-36 133
Msa0594320 MtrunA17_Chr3g0104101 45.833 144 60 6 193 321 9 149 3.46e-28 106
Msa0594320 MtrunA17_Chr1g0181501 31.217 189 123 4 138 321 3 189 6.05e-22 91.3
Msa0594320 MtrunA17_Chr5g0432361 48.387 93 45 2 230 320 17 108 8.36e-22 88.6
Msa0594320 MtrunA17_Chr2g0316771 31.250 176 84 3 179 317 7 182 2.84e-20 86.7
Msa0594320 MtrunA17_Chr6g0468731 56.338 71 26 3 66 136 22 87 1.36e-16 73.9
Msa0594320 MtrunA17_Chr4g0013811 50.000 74 36 1 139 212 6 78 3.22e-16 72.4
Msa0594320 MtrunA17_Chr1g0181491 39.286 112 63 4 25 135 10 117 8.86e-16 73.6
Msa0594320 MtrunA17_Chr7g0254181 38.318 107 60 3 89 195 22 122 1.28e-15 73.2
Msa0594320 MtrunA17_Chr3g0124821 29.615 260 140 11 61 303 121 354 1.55e-15 76.6
Msa0594320 MtrunA17_Chr1g0196191 55.224 67 28 2 69 135 27 91 1.77e-14 70.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0594320 AT5G05340.1 61.953 297 109 3 27 321 30 324 3.81e-127 366
Msa0594320 AT1G14550.1 52.978 319 145 4 7 321 4 321 1.23e-112 329
Msa0594320 AT5G58400.1 52.351 319 149 2 5 321 8 325 3.21e-111 326
Msa0594320 AT4G36430.1 53.465 303 131 4 27 321 30 330 1.26e-110 325
Msa0594320 AT5G58390.1 55.484 310 135 2 14 321 8 316 5.68e-110 322
Msa0594320 AT2G18150.1 52.805 303 133 4 27 321 36 336 3.54e-109 321
Msa0594320 AT2G18140.1 52.805 303 133 4 27 321 35 335 8.23e-107 315
Msa0594320 AT1G14540.1 51.420 317 150 4 7 321 1 315 5.10e-106 312
Msa0594320 AT1G44970.1 50.489 307 141 4 24 321 42 346 8.41e-103 305
Msa0594320 AT3G50990.1 49.677 310 146 4 20 321 34 341 1.97e-102 304
Msa0594320 AT5G66390.1 48.024 329 148 5 14 321 7 333 8.57e-102 302
Msa0594320 AT5G06720.1 47.950 317 154 4 14 321 19 333 9.87e-102 302
Msa0594320 AT5G06730.1 45.426 317 162 4 14 321 20 334 6.62e-96 288
Msa0594320 AT3G32980.1 48.039 306 146 5 27 321 31 334 3.22e-95 286
Msa0594320 AT3G49110.1 48.377 308 146 5 25 321 31 336 9.63e-95 285
Msa0594320 AT2G35380.1 47.734 331 152 7 9 321 8 335 3.43e-92 278
Msa0594320 AT3G49120.1 46.645 313 154 5 20 321 25 335 3.47e-92 278
Msa0594320 AT4G08770.1 48.039 306 146 5 27 321 24 327 5.40e-91 275
Msa0594320 AT5G19890.1 46.847 333 152 9 1 321 8 327 6.70e-91 274
Msa0594320 AT1G68850.1 45.779 308 152 6 27 321 30 335 1.03e-90 274
Msa0594320 AT4G08780.1 47.386 306 148 5 27 321 24 327 1.53e-90 274
Msa0594320 AT1G49570.1 47.525 303 147 5 25 317 46 346 9.54e-90 272
Msa0594320 AT4G16270.1 48.322 298 142 5 32 321 55 348 3.48e-89 271
Msa0594320 AT2G38380.1 45.820 323 158 7 13 321 14 333 1.97e-88 269
Msa0594320 AT2G38390.1 43.910 312 163 5 20 321 24 333 5.07e-85 260
Msa0594320 AT5G19880.1 45.603 307 153 5 27 321 25 329 6.86e-84 256
Msa0594320 AT2G22420.1 42.593 324 172 6 7 321 1 319 4.13e-82 252
Msa0594320 AT1G71695.1 43.289 298 164 4 27 321 44 339 1.17e-78 244
Msa0594320 AT3G01190.1 43.092 304 158 7 26 321 25 321 1.32e-78 243
Msa0594320 AT5G64120.1 42.761 297 157 5 31 321 39 328 4.00e-78 241
Msa0594320 AT5G42180.1 41.534 313 169 6 14 319 10 315 4.76e-78 241
Msa0594320 AT5G51890.1 41.667 324 170 9 7 321 9 322 2.76e-77 239
Msa0594320 AT5G15180.1 41.176 323 175 8 9 321 12 329 5.14e-77 239
Msa0594320 AT5G17820.1 40.439 319 171 6 10 321 7 313 6.82e-77 238
Msa0594320 AT1G05260.1 43.092 304 160 7 27 321 26 325 2.36e-76 237
Msa0594320 AT5G17820.2 40.439 319 171 6 10 321 60 366 6.97e-76 237
Msa0594320 AT3G03670.1 40.881 318 172 6 14 321 10 321 7.50e-76 236
Msa0594320 AT3G21770.1 40.446 314 174 7 16 320 18 327 1.52e-74 233
Msa0594320 AT4G11290.1 39.144 327 186 7 5 321 3 326 3.72e-74 231
Msa0594320 AT1G05240.1 41.311 305 164 7 27 321 26 325 2.61e-73 229
Msa0594320 AT1G05250.1 41.311 305 164 7 27 321 26 325 2.61e-73 229
Msa0594320 AT4G33420.1 41.158 311 173 7 14 321 22 325 5.11e-73 228
Msa0594320 AT4G33420.2 41.158 311 173 7 14 321 69 372 1.89e-72 228
Msa0594320 AT2G41480.1 39.818 329 179 6 5 321 7 328 1.56e-71 225
Msa0594320 AT5G39580.1 40.244 328 180 8 1 321 1 319 4.08e-70 221
Msa0594320 AT5G40150.1 40.000 315 178 6 11 321 21 328 4.70e-69 218
Msa0594320 AT2G18980.1 38.066 331 187 7 1 321 1 323 6.90e-69 218
Msa0594320 AT4G26010.1 38.141 312 181 7 8 318 6 306 3.18e-68 216
Msa0594320 AT2G35380.2 49.799 249 110 5 86 321 1 247 3.72e-68 213
Msa0594320 AT4G26010.2 38.141 312 181 7 8 318 34 334 5.73e-68 216
Msa0594320 AT5G14130.1 37.383 321 189 6 9 321 14 330 2.34e-67 214
Msa0594320 AT5G14130.2 37.383 321 189 6 9 321 55 371 5.26e-67 214
Msa0594320 AT5G67400.1 37.460 315 185 5 13 317 13 325 9.97e-67 213
Msa0594320 AT1G34510.1 38.636 308 180 6 15 321 10 309 3.40e-66 211
Msa0594320 AT3G28200.1 39.604 303 178 5 22 321 16 316 5.14e-66 210
Msa0594320 AT4G30170.1 38.235 306 175 6 25 321 25 325 8.27e-66 210
Msa0594320 AT5G47000.1 37.072 321 193 6 7 321 13 330 5.92e-65 208
Msa0594320 AT3G49960.1 36.943 314 186 5 14 317 14 325 6.04e-65 208
Msa0594320 AT1G30870.1 41.503 306 157 8 27 321 51 345 9.62e-65 208
Msa0594320 AT4G37530.1 38.742 302 175 4 25 317 25 325 2.15e-64 206
Msa0594320 AT5G64100.1 40.924 303 159 7 29 321 39 331 2.30e-64 206
Msa0594320 AT5G64110.1 40.498 321 170 7 14 321 18 330 1.77e-63 204
Msa0594320 AT4G33870.1 34.024 338 178 6 25 320 66 400 3.44e-63 206
Msa0594320 AT4G17690.1 38.127 299 179 5 27 321 26 322 5.10e-62 200
Msa0594320 AT4G37520.1 37.086 302 180 4 25 317 25 325 2.23e-60 196
Msa0594320 AT2G39040.1 40.129 309 167 10 27 321 46 350 4.60e-60 196
Msa0594320 AT5G22410.1 34.568 324 191 10 7 318 8 322 1.37e-59 194
Msa0594320 AT1G24110.1 37.624 303 179 6 27 321 22 322 1.45e-59 194
Msa0594320 AT4G31760.1 36.909 317 184 5 14 321 17 326 1.90e-59 194
Msa0594320 AT4G37520.2 36.755 302 178 5 25 317 25 322 1.15e-58 191
Msa0594320 AT5G24070.1 36.778 329 186 8 7 321 15 335 2.53e-57 189
Msa0594320 AT4G25980.1 36.334 311 180 6 23 321 22 326 8.05e-57 187
Msa0594320 AT1G77100.1 39.474 304 171 9 25 321 22 319 2.86e-56 185
Msa0594320 AT4G37530.2 40.000 255 143 4 25 270 25 278 4.03e-56 184
Msa0594320 AT2G34060.1 35.329 334 193 8 6 318 12 343 6.33e-56 185
Msa0594320 AT2G24800.1 36.393 305 178 5 27 321 31 329 7.35e-56 184
Msa0594320 AT2G43480.1 35.890 326 187 8 10 321 18 335 6.94e-55 182
Msa0594320 AT2G37130.1 36.213 301 183 6 27 321 30 327 7.64e-54 179
Msa0594320 AT2G37130.2 36.242 298 181 6 30 321 2 296 8.05e-54 178
Msa0594320 AT4G21960.1 33.951 324 200 6 9 321 7 327 1.03e-53 179
Msa0594320 AT3G17070.1 33.657 309 184 8 27 321 38 339 1.38e-45 158
Msa0594320 AT5G39580.2 40.094 212 114 7 5 216 5 203 5.14e-40 140
Msa0594320 AT4G25980.2 42.529 174 94 4 27 200 71 238 2.97e-37 135
Msa0594320 AT3G17070.2 33.708 267 155 9 69 321 18 276 1.44e-34 127
Msa0594320 AT2G24800.2 41.667 168 92 3 27 194 31 192 4.41e-34 125
Msa0594320 AT1G77490.2 25.385 260 151 8 61 303 106 339 3.39e-14 73.2
Msa0594320 AT1G77490.1 25.385 260 151 8 61 303 106 339 3.64e-14 73.2

Find 58 sgRNAs with CRISPR-Local

Find 186 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCTAGCTGAATTGATATT+TGG 0.122185 4_2:+21746492 None:intergenic
CAATATCTTGATGAATTAAT+TGG 0.179883 4_2:+21745151 None:intergenic
TGAAGTGATTGATGAGATTA+AGG 0.221980 4_2:-21746466 Msa0594320:CDS
CTAATAGTGCTCAGAGCATT+AGG 0.245488 4_2:+21746787 None:intergenic
GTTGGAGTCTCCTCCTTCTC+TGG 0.261467 4_2:+21745424 None:intergenic
TCGGATCAGGAATTATTAAA+TGG 0.273047 4_2:-21745317 Msa0594320:CDS
GGAAATATTATGACACTTAC+TGG 0.283136 4_2:-21745209 Msa0594320:CDS
AAAGACCTCGTTGCCCTATC+TGG 0.286567 4_2:-21745551 Msa0594320:CDS
TTATTAAATGGTGATTATAC+TGG 0.313939 4_2:-21745305 Msa0594320:CDS
GTATTTCTCAATGTTCTTCC+AGG 0.331196 4_2:-21746881 Msa0594320:CDS
AGTCGTGCCGATGCAGATTC+AGG 0.362977 4_2:-21745644 Msa0594320:CDS
TGCGAAATCTATGATTAAGA+TGG 0.368103 4_2:-21745231 Msa0594320:CDS
AAAGAAAGGGCTTCTTCATT+CGG 0.378097 4_2:-21745336 Msa0594320:CDS
CTATCTGGAGCACACACTAT+TGG 0.391267 4_2:-21745536 Msa0594320:CDS
TGTTCTTGTCATTGTAGATT+CGG 0.397423 4_2:+21745486 None:intergenic
CAATAGTGTGTGCTCCAGAT+AGG 0.400931 4_2:+21745537 None:intergenic
TAATAGTGCTCAGAGCATTA+GGG 0.413537 4_2:+21746788 None:intergenic
CCTAGCTGCACTTTCCATGA+TGG 0.425419 4_2:+21745689 None:intergenic
AGAAAGACTGAATGATGGTC+CGG 0.452732 4_2:+21745613 None:intergenic
TGTTTCTTGTGCAGACATAT+TGG 0.453461 4_2:-21746412 Msa0594320:CDS
AGGGCTTCTTCATTCGGATC+AGG 0.466116 4_2:-21745330 Msa0594320:CDS
TCTAGACTCTACACCTTCCA+TGG 0.474313 4_2:-21746535 Msa0594320:CDS
TTGGAGTCTCCTCCTTCTCT+GGG 0.488124 4_2:+21745425 None:intergenic
ATGTCTGCACAAGAAACAAC+TGG 0.493198 4_2:+21746417 None:intergenic
GCGAAATCTATGATTAAGAT+GGG 0.499275 4_2:-21745230 Msa0594320:CDS
GATCGTTGGTTAGAAAATAT+AGG 0.503912 4_2:-21745283 Msa0594320:CDS
GAGCTGCCAACACTATTGCC+TGG 0.503939 4_2:+21746863 None:intergenic
GTGAAATTCGTTCAAACTGC+AGG 0.508334 4_2:-21745178 Msa0594320:CDS
ATTTGATGTGTCATATTACC+AGG 0.518981 4_2:-21745369 Msa0594320:CDS
GAAAGACTGAATGATGGTCC+GGG 0.528311 4_2:+21745614 None:intergenic
ACAGTCTAGAGCTGCAAGGT+TGG 0.528477 4_2:+21745406 None:intergenic
CCAAATATCAATTCAGCTAG+AGG 0.539441 4_2:-21746492 Msa0594320:CDS
GACATTTGTCCCAGAGAAGG+AGG 0.539825 4_2:-21745434 Msa0594320:CDS
ATTGTGATTCAGGGTTGTGA+TGG 0.541677 4_2:-21746567 Msa0594320:intron
CAAGACATTTGTCCCAGAGA+AGG 0.543913 4_2:-21745437 Msa0594320:CDS
AATAGTGTGTGCTCCAGATA+GGG 0.548473 4_2:+21745538 None:intergenic
GCAGATTCAGGCAACATCCC+CGG 0.567065 4_2:-21745632 Msa0594320:CDS
TGCAGTTAGGAGGACCATCA+TGG 0.571529 4_2:-21745703 Msa0594320:intron
GTTCTTCCAGGCAATAGTGT+TGG 0.575808 4_2:-21746869 Msa0594320:CDS
TGGTGATTATACTGGATCGT+TGG 0.583357 4_2:-21745297 Msa0594320:CDS
TATATATGGATGCAGTTAGG+AGG 0.592979 4_2:-21745713 Msa0594320:intron
GATGTTGCCTGAATCTGCAT+CGG 0.594676 4_2:+21745637 None:intergenic
CCATCATGGAAAGTGCAGCT+AGG 0.599561 4_2:-21745689 Msa0594320:CDS
TGCAAGAGACTCCGTCGTTG+CGG 0.606891 4_2:-21746382 Msa0594320:intron
GAATCTGTTGATAAAGCATG+TGG 0.612974 4_2:-21746444 Msa0594320:CDS
ATGACACTTACTGGGAGTCA+AGG 0.618615 4_2:-21745200 Msa0594320:CDS
ATTATTACTAACCGCAACGA+CGG 0.620676 4_2:+21746371 None:intergenic
AGTTGAGAAAGACTGAATGA+TGG 0.626761 4_2:+21745608 None:intergenic
GTTCAAAGAGAGAACCGTAT+GGG 0.629967 4_2:-21746745 Msa0594320:CDS
AGTTCAAAGAGAGAACCGTA+TGG 0.633955 4_2:-21746746 Msa0594320:CDS
CAAAGAGAGAACCGTATGGG+TGG 0.637423 4_2:-21746742 Msa0594320:CDS
GTAGTAAAGAGCCACCCATA+CGG 0.639551 4_2:+21746731 None:intergenic
AGCTCTAGACTGTGTTACAC+CGG 0.650454 4_2:-21745396 Msa0594320:CDS
GAAATATTATGACACTTACT+GGG 0.662430 4_2:-21745208 Msa0594320:CDS
TAACACAGTCTAGAGCTGCA+AGG 0.710102 4_2:+21745402 None:intergenic
CATTGAGAAATACCTATGTG+AGG 0.711191 4_2:+21746891 None:intergenic
AAAGACTGAATGATGGTCCG+GGG 0.721286 4_2:+21745615 None:intergenic
GTGCTCCAGATAGGGCAACG+AGG 0.748414 4_2:+21745546 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAAAAATAAATAAAATT+GGG + chr4_2:21745477-21745496 None:intergenic 0.0%
!! AATAAAATAAATTTAATAAA+AGG - chr4_2:21745792-21745811 Msa0594320:intron 0.0%
!! AATAAAAAATAAATAAAATT+GGG + chr4_2:21745477-21745496 None:intergenic 0.0%
!! AATAAAATAAATTTAATAAA+AGG - chr4_2:21745792-21745811 Msa0594320:intron 0.0%
!! GATAATAAAAATTTATTTGA+TGG - chr4_2:21746095-21746114 Msa0594320:intron 10.0%
!! GATAATAAAAATTTATTTGA+TGG - chr4_2:21746095-21746114 Msa0594320:intron 10.0%
!!! TTTATTTTTTATTGTGATTC+AGG - chr4_2:21745484-21745503 Msa0594320:CDS 15.0%
!!! TTATTTTTTATTGTGATTCA+GGG - chr4_2:21745485-21745504 Msa0594320:CDS 15.0%
!! TAAATTTAATAAAAGGATGT+TGG - chr4_2:21745799-21745818 Msa0594320:intron 15.0%
!! CTGAAATTTACAATTATATA+TGG - chr4_2:21746334-21746353 Msa0594320:intron 15.0%
!!! TTTATTTTTTATTGTGATTC+AGG - chr4_2:21745484-21745503 Msa0594320:CDS 15.0%
!!! TTATTTTTTATTGTGATTCA+GGG - chr4_2:21745485-21745504 Msa0594320:CDS 15.0%
!! TAAATTTAATAAAAGGATGT+TGG - chr4_2:21745799-21745818 Msa0594320:intron 15.0%
!! CTGAAATTTACAATTATATA+TGG - chr4_2:21746334-21746353 Msa0594320:intron 15.0%
!!! AATTTTGATATATTCAGAGT+TGG + chr4_2:21745867-21745886 None:intergenic 20.0%
!! AAAATTATGTTAACTAGATC+AGG - chr4_2:21746132-21746151 Msa0594320:intron 20.0%
!! AATATATACACATCAATAGA+AGG + chr4_2:21746216-21746235 None:intergenic 20.0%
!!! TTGATGTGTATATATTGATT+TGG - chr4_2:21746220-21746239 Msa0594320:intron 20.0%
!! TTATTAAATGGTGATTATAC+TGG - chr4_2:21746756-21746775 Msa0594320:CDS 20.0%
!!! AATTTTGATATATTCAGAGT+TGG + chr4_2:21745867-21745886 None:intergenic 20.0%
!! AAAATTATGTTAACTAGATC+AGG - chr4_2:21746132-21746151 Msa0594320:intron 20.0%
!! AATATATACACATCAATAGA+AGG + chr4_2:21746216-21746235 None:intergenic 20.0%
!!! TTGATGTGTATATATTGATT+TGG - chr4_2:21746220-21746239 Msa0594320:intron 20.0%
!! TTATTAAATGGTGATTATAC+TGG - chr4_2:21746756-21746775 Msa0594320:CDS 20.0%
!! ATCTACAAATTTGCTTGTAA+GGG + chr4_2:21745452-21745471 None:intergenic 25.0%
!! TATCTACAAATTTGCTTGTA+AGG + chr4_2:21745453-21745472 None:intergenic 25.0%
! TGAGTTATTGGATATTAAAG+AGG + chr4_2:21746269-21746288 None:intergenic 25.0%
!!! ATTTTGCTCTTTTGAGTTAT+TGG + chr4_2:21746281-21746300 None:intergenic 25.0%
! AATTATATATGGATGCAGTT+AGG - chr4_2:21746345-21746364 Msa0594320:intron 25.0%
! AGGAACTGATTAAAAAGAAA+GGG - chr4_2:21746712-21746731 Msa0594320:CDS 25.0%
! GAAATATTATGACACTTACT+GGG - chr4_2:21746853-21746872 Msa0594320:CDS 25.0%
!! ATCTACAAATTTGCTTGTAA+GGG + chr4_2:21745452-21745471 None:intergenic 25.0%
!! TATCTACAAATTTGCTTGTA+AGG + chr4_2:21745453-21745472 None:intergenic 25.0%
! TGAGTTATTGGATATTAAAG+AGG + chr4_2:21746269-21746288 None:intergenic 25.0%
!!! ATTTTGCTCTTTTGAGTTAT+TGG + chr4_2:21746281-21746300 None:intergenic 25.0%
! AATTATATATGGATGCAGTT+AGG - chr4_2:21746345-21746364 Msa0594320:intron 25.0%
! AGGAACTGATTAAAAAGAAA+GGG - chr4_2:21746712-21746731 Msa0594320:CDS 25.0%
! GAAATATTATGACACTTACT+GGG - chr4_2:21746853-21746872 Msa0594320:CDS 25.0%
TGAAGTGATTGATGAGATTA+AGG - chr4_2:21745595-21745614 Msa0594320:CDS 30.0%
! GGTAAGAGTTAAGTTTTACT+CGG - chr4_2:21745820-21745839 Msa0594320:intron 30.0%
TTTGATATATTCAGAGTTGG+TGG + chr4_2:21745864-21745883 None:intergenic 30.0%
ATTAGCAAGTTACACAACTT+TGG + chr4_2:21745897-21745916 None:intergenic 30.0%
GATATTAAAGAGGATTTCGT+AGG + chr4_2:21746259-21746278 None:intergenic 30.0%
ATCAAAAATTTCGACAACCA+AGG - chr4_2:21746477-21746496 Msa0594320:CDS 30.0%
TGTTCTTGTCATTGTAGATT+CGG + chr4_2:21746578-21746597 None:intergenic 30.0%
! TATGACACATCAAATTTTGC+CGG + chr4_2:21746687-21746706 None:intergenic 30.0%
ATTTGATGTGTCATATTACC+AGG - chr4_2:21746692-21746711 Msa0594320:intron 30.0%
! CTTTCTTTTTAATCAGTTCC+TGG + chr4_2:21746713-21746732 None:intergenic 30.0%
CAGGAACTGATTAAAAAGAA+AGG - chr4_2:21746711-21746730 Msa0594320:CDS 30.0%
TCGGATCAGGAATTATTAAA+TGG - chr4_2:21746744-21746763 Msa0594320:CDS 30.0%
! GATCGTTGGTTAGAAAATAT+AGG - chr4_2:21746778-21746797 Msa0594320:CDS 30.0%
TGCGAAATCTATGATTAAGA+TGG - chr4_2:21746830-21746849 Msa0594320:CDS 30.0%
GCGAAATCTATGATTAAGAT+GGG - chr4_2:21746831-21746850 Msa0594320:CDS 30.0%
GGAAATATTATGACACTTAC+TGG - chr4_2:21746852-21746871 Msa0594320:CDS 30.0%
TGAAGTGATTGATGAGATTA+AGG - chr4_2:21745595-21745614 Msa0594320:CDS 30.0%
! GGTAAGAGTTAAGTTTTACT+CGG - chr4_2:21745820-21745839 Msa0594320:intron 30.0%
TTTGATATATTCAGAGTTGG+TGG + chr4_2:21745864-21745883 None:intergenic 30.0%
ATTAGCAAGTTACACAACTT+TGG + chr4_2:21745897-21745916 None:intergenic 30.0%
GATATTAAAGAGGATTTCGT+AGG + chr4_2:21746259-21746278 None:intergenic 30.0%
ATCAAAAATTTCGACAACCA+AGG - chr4_2:21746477-21746496 Msa0594320:CDS 30.0%
TGTTCTTGTCATTGTAGATT+CGG + chr4_2:21746578-21746597 None:intergenic 30.0%
! TATGACACATCAAATTTTGC+CGG + chr4_2:21746687-21746706 None:intergenic 30.0%
ATTTGATGTGTCATATTACC+AGG - chr4_2:21746692-21746711 Msa0594320:intron 30.0%
! CTTTCTTTTTAATCAGTTCC+TGG + chr4_2:21746713-21746732 None:intergenic 30.0%
CAGGAACTGATTAAAAAGAA+AGG - chr4_2:21746711-21746730 Msa0594320:CDS 30.0%
TCGGATCAGGAATTATTAAA+TGG - chr4_2:21746744-21746763 Msa0594320:CDS 30.0%
! GATCGTTGGTTAGAAAATAT+AGG - chr4_2:21746778-21746797 Msa0594320:CDS 30.0%
TGCGAAATCTATGATTAAGA+TGG - chr4_2:21746830-21746849 Msa0594320:CDS 30.0%
GCGAAATCTATGATTAAGAT+GGG - chr4_2:21746831-21746850 Msa0594320:CDS 30.0%
GGAAATATTATGACACTTAC+TGG - chr4_2:21746852-21746871 Msa0594320:CDS 30.0%
CATTGAGAAATACCTATGTG+AGG + chr4_2:21745173-21745192 None:intergenic 35.0%
GTATTTCTCAATGTTCTTCC+AGG - chr4_2:21745180-21745199 Msa0594320:CDS 35.0%
! TAATAGTGCTCAGAGCATTA+GGG + chr4_2:21745276-21745295 None:intergenic 35.0%
!!! TTTTTTTCACTGTCCATGGA+AGG + chr4_2:21745542-21745561 None:intergenic 35.0%
!!! TGCATTTTTTTCACTGTCCA+TGG + chr4_2:21745546-21745565 None:intergenic 35.0%
CCTCTAGCTGAATTGATATT+TGG + chr4_2:21745572-21745591 None:intergenic 35.0%
CCAAATATCAATTCAGCTAG+AGG - chr4_2:21745569-21745588 Msa0594320:CDS 35.0%
! GAATCTGTTGATAAAGCATG+TGG - chr4_2:21745617-21745636 Msa0594320:CDS 35.0%
TGTTTCTTGTGCAGACATAT+TGG - chr4_2:21745649-21745668 Msa0594320:CDS 35.0%
ATTATTACTAACCGCAACGA+CGG + chr4_2:21745693-21745712 None:intergenic 35.0%
TTGAACAGAATTAGTCAGCA+TGG - chr4_2:21745748-21745767 Msa0594320:intron 35.0%
TATATATGGATGCAGTTAGG+AGG - chr4_2:21746348-21746367 Msa0594320:intron 35.0%
AGTTGAGAAAGACTGAATGA+TGG + chr4_2:21746456-21746475 None:intergenic 35.0%
AAAGAAAGGGCTTCTTCATT+CGG - chr4_2:21746725-21746744 Msa0594320:CDS 35.0%
CATTGAGAAATACCTATGTG+AGG + chr4_2:21745173-21745192 None:intergenic 35.0%
GTATTTCTCAATGTTCTTCC+AGG - chr4_2:21745180-21745199 Msa0594320:CDS 35.0%
! TAATAGTGCTCAGAGCATTA+GGG + chr4_2:21745276-21745295 None:intergenic 35.0%
!!! TTTTTTTCACTGTCCATGGA+AGG + chr4_2:21745542-21745561 None:intergenic 35.0%
!!! TGCATTTTTTTCACTGTCCA+TGG + chr4_2:21745546-21745565 None:intergenic 35.0%
CCTCTAGCTGAATTGATATT+TGG + chr4_2:21745572-21745591 None:intergenic 35.0%
CCAAATATCAATTCAGCTAG+AGG - chr4_2:21745569-21745588 Msa0594320:CDS 35.0%
! GAATCTGTTGATAAAGCATG+TGG - chr4_2:21745617-21745636 Msa0594320:CDS 35.0%
TGTTTCTTGTGCAGACATAT+TGG - chr4_2:21745649-21745668 Msa0594320:CDS 35.0%
ATTATTACTAACCGCAACGA+CGG + chr4_2:21745693-21745712 None:intergenic 35.0%
TTGAACAGAATTAGTCAGCA+TGG - chr4_2:21745748-21745767 Msa0594320:intron 35.0%
TATATATGGATGCAGTTAGG+AGG - chr4_2:21746348-21746367 Msa0594320:intron 35.0%
AGTTGAGAAAGACTGAATGA+TGG + chr4_2:21746456-21746475 None:intergenic 35.0%
AAAGAAAGGGCTTCTTCATT+CGG - chr4_2:21746725-21746744 Msa0594320:CDS 35.0%
! CTAATAGTGCTCAGAGCATT+AGG + chr4_2:21745277-21745296 None:intergenic 40.0%
AGTTCAAAGAGAGAACCGTA+TGG - chr4_2:21745315-21745334 Msa0594320:CDS 40.0%
GTTCAAAGAGAGAACCGTAT+GGG - chr4_2:21745316-21745335 Msa0594320:CDS 40.0%
ATTGTGATTCAGGGTTGTGA+TGG - chr4_2:21745494-21745513 Msa0594320:CDS 40.0%
ATGTCTGCACAAGAAACAAC+TGG + chr4_2:21745647-21745666 None:intergenic 40.0%
ACAGAATTAGTCAGCATGGT+TGG - chr4_2:21745752-21745771 Msa0594320:intron 40.0%
! TGGAGTGTCTCTTAACTAGT+TGG + chr4_2:21746171-21746190 None:intergenic 40.0%
TGAAGACCAACAAACATGCA+TGG + chr4_2:21746191-21746210 None:intergenic 40.0%
AAAGAGGATTTCGTAGGACT+TGG + chr4_2:21746253-21746272 None:intergenic 40.0%
AGAAAGACTGAATGATGGTC+CGG + chr4_2:21746451-21746470 None:intergenic 40.0%
!! CAACGAGGTCTTTTTCGTTT+AGG + chr4_2:21746503-21746522 None:intergenic 40.0%
AATAGTGTGTGCTCCAGATA+GGG + chr4_2:21746526-21746545 None:intergenic 40.0%
TGGTGATTATACTGGATCGT+TGG - chr4_2:21746764-21746783 Msa0594320:CDS 40.0%
GTGAAATTCGTTCAAACTGC+AGG - chr4_2:21746883-21746902 Msa0594320:CDS 40.0%
! CTAATAGTGCTCAGAGCATT+AGG + chr4_2:21745277-21745296 None:intergenic 40.0%
AGTTCAAAGAGAGAACCGTA+TGG - chr4_2:21745315-21745334 Msa0594320:CDS 40.0%
GTTCAAAGAGAGAACCGTAT+GGG - chr4_2:21745316-21745335 Msa0594320:CDS 40.0%
ATTGTGATTCAGGGTTGTGA+TGG - chr4_2:21745494-21745513 Msa0594320:CDS 40.0%
ATGTCTGCACAAGAAACAAC+TGG + chr4_2:21745647-21745666 None:intergenic 40.0%
ACAGAATTAGTCAGCATGGT+TGG - chr4_2:21745752-21745771 Msa0594320:intron 40.0%
! TGGAGTGTCTCTTAACTAGT+TGG + chr4_2:21746171-21746190 None:intergenic 40.0%
TGAAGACCAACAAACATGCA+TGG + chr4_2:21746191-21746210 None:intergenic 40.0%
AAAGAGGATTTCGTAGGACT+TGG + chr4_2:21746253-21746272 None:intergenic 40.0%
AGAAAGACTGAATGATGGTC+CGG + chr4_2:21746451-21746470 None:intergenic 40.0%
!! CAACGAGGTCTTTTTCGTTT+AGG + chr4_2:21746503-21746522 None:intergenic 40.0%
AATAGTGTGTGCTCCAGATA+GGG + chr4_2:21746526-21746545 None:intergenic 40.0%
TGGTGATTATACTGGATCGT+TGG - chr4_2:21746764-21746783 Msa0594320:CDS 40.0%
GTGAAATTCGTTCAAACTGC+AGG - chr4_2:21746883-21746902 Msa0594320:CDS 40.0%
GTTCTTCCAGGCAATAGTGT+TGG - chr4_2:21745192-21745211 Msa0594320:CDS 45.0%
GTAGTAAAGAGCCACCCATA+CGG + chr4_2:21745333-21745352 None:intergenic 45.0%
TCTAGACTCTACACCTTCCA+TGG - chr4_2:21745526-21745545 Msa0594320:CDS 45.0%
GACACTCCATGCATGTTTGT+TGG - chr4_2:21746182-21746201 Msa0594320:intron 45.0%
GATGTTGCCTGAATCTGCAT+CGG + chr4_2:21746427-21746446 None:intergenic 45.0%
AAAGACTGAATGATGGTCCG+GGG + chr4_2:21746449-21746468 None:intergenic 45.0%
GAAAGACTGAATGATGGTCC+GGG + chr4_2:21746450-21746469 None:intergenic 45.0%
!! GGTCTTTTTCGTTTAGGCCT+TGG + chr4_2:21746497-21746516 None:intergenic 45.0%
CAATAGTGTGTGCTCCAGAT+AGG + chr4_2:21746527-21746546 None:intergenic 45.0%
! CTATCTGGAGCACACACTAT+TGG - chr4_2:21746525-21746544 Msa0594320:CDS 45.0%
CAAGACATTTGTCCCAGAGA+AGG - chr4_2:21746624-21746643 Msa0594320:intron 45.0%
! TAACACAGTCTAGAGCTGCA+AGG + chr4_2:21746662-21746681 None:intergenic 45.0%
!! AGCTCTAGACTGTGTTACAC+CGG - chr4_2:21746665-21746684 Msa0594320:intron 45.0%
ATGACACTTACTGGGAGTCA+AGG - chr4_2:21746861-21746880 Msa0594320:CDS 45.0%
GTTCTTCCAGGCAATAGTGT+TGG - chr4_2:21745192-21745211 Msa0594320:CDS 45.0%
GTAGTAAAGAGCCACCCATA+CGG + chr4_2:21745333-21745352 None:intergenic 45.0%
TCTAGACTCTACACCTTCCA+TGG - chr4_2:21745526-21745545 Msa0594320:CDS 45.0%
GACACTCCATGCATGTTTGT+TGG - chr4_2:21746182-21746201 Msa0594320:intron 45.0%
GATGTTGCCTGAATCTGCAT+CGG + chr4_2:21746427-21746446 None:intergenic 45.0%
AAAGACTGAATGATGGTCCG+GGG + chr4_2:21746449-21746468 None:intergenic 45.0%
GAAAGACTGAATGATGGTCC+GGG + chr4_2:21746450-21746469 None:intergenic 45.0%
!! GGTCTTTTTCGTTTAGGCCT+TGG + chr4_2:21746497-21746516 None:intergenic 45.0%
CAATAGTGTGTGCTCCAGAT+AGG + chr4_2:21746527-21746546 None:intergenic 45.0%
! CTATCTGGAGCACACACTAT+TGG - chr4_2:21746525-21746544 Msa0594320:CDS 45.0%
CAAGACATTTGTCCCAGAGA+AGG - chr4_2:21746624-21746643 Msa0594320:intron 45.0%
! TAACACAGTCTAGAGCTGCA+AGG + chr4_2:21746662-21746681 None:intergenic 45.0%
!! AGCTCTAGACTGTGTTACAC+CGG - chr4_2:21746665-21746684 Msa0594320:intron 45.0%
ATGACACTTACTGGGAGTCA+AGG - chr4_2:21746861-21746880 Msa0594320:CDS 45.0%
!! CAATAAAAAATAAATAAAAT+TGG + chr4_2:21745478-21745497 None:intergenic 5.0%
!! CAATAAAAAATAAATAAAAT+TGG + chr4_2:21745478-21745497 None:intergenic 5.0%
CAAAGAGAGAACCGTATGGG+TGG - chr4_2:21745319-21745338 Msa0594320:CDS 50.0%
TGCAGTTAGGAGGACCATCA+TGG - chr4_2:21746358-21746377 Msa0594320:intron 50.0%
CCTAGCTGCACTTTCCATGA+TGG + chr4_2:21746375-21746394 None:intergenic 50.0%
! CCATCATGGAAAGTGCAGCT+AGG - chr4_2:21746372-21746391 Msa0594320:intron 50.0%
AAAGACCTCGTTGCCCTATC+TGG - chr4_2:21746510-21746529 Msa0594320:CDS 50.0%
GACATTTGTCCCAGAGAAGG+AGG - chr4_2:21746627-21746646 Msa0594320:intron 50.0%
TTGGAGTCTCCTCCTTCTCT+GGG + chr4_2:21746639-21746658 None:intergenic 50.0%
! ACAGTCTAGAGCTGCAAGGT+TGG + chr4_2:21746658-21746677 None:intergenic 50.0%
AGGGCTTCTTCATTCGGATC+AGG - chr4_2:21746731-21746750 Msa0594320:CDS 50.0%
CAAAGAGAGAACCGTATGGG+TGG - chr4_2:21745319-21745338 Msa0594320:CDS 50.0%
TGCAGTTAGGAGGACCATCA+TGG - chr4_2:21746358-21746377 Msa0594320:intron 50.0%
CCTAGCTGCACTTTCCATGA+TGG + chr4_2:21746375-21746394 None:intergenic 50.0%
! CCATCATGGAAAGTGCAGCT+AGG - chr4_2:21746372-21746391 Msa0594320:intron 50.0%
AAAGACCTCGTTGCCCTATC+TGG - chr4_2:21746510-21746529 Msa0594320:CDS 50.0%
GACATTTGTCCCAGAGAAGG+AGG - chr4_2:21746627-21746646 Msa0594320:intron 50.0%
TTGGAGTCTCCTCCTTCTCT+GGG + chr4_2:21746639-21746658 None:intergenic 50.0%
! ACAGTCTAGAGCTGCAAGGT+TGG + chr4_2:21746658-21746677 None:intergenic 50.0%
AGGGCTTCTTCATTCGGATC+AGG - chr4_2:21746731-21746750 Msa0594320:CDS 50.0%
GAGCTGCCAACACTATTGCC+TGG + chr4_2:21745201-21745220 None:intergenic 55.0%
TGCAAGAGACTCCGTCGTTG+CGG - chr4_2:21745679-21745698 Msa0594320:CDS 55.0%
! AGTCGTGCCGATGCAGATTC+AGG - chr4_2:21746417-21746436 Msa0594320:CDS 55.0%
GCAGATTCAGGCAACATCCC+CGG - chr4_2:21746429-21746448 Msa0594320:CDS 55.0%
GTTGGAGTCTCCTCCTTCTC+TGG + chr4_2:21746640-21746659 None:intergenic 55.0%
GAGCTGCCAACACTATTGCC+TGG + chr4_2:21745201-21745220 None:intergenic 55.0%
TGCAAGAGACTCCGTCGTTG+CGG - chr4_2:21745679-21745698 Msa0594320:CDS 55.0%
! AGTCGTGCCGATGCAGATTC+AGG - chr4_2:21746417-21746436 Msa0594320:CDS 55.0%
GCAGATTCAGGCAACATCCC+CGG - chr4_2:21746429-21746448 Msa0594320:CDS 55.0%
GTTGGAGTCTCCTCCTTCTC+TGG + chr4_2:21746640-21746659 None:intergenic 55.0%
GTGCTCCAGATAGGGCAACG+AGG + chr4_2:21746518-21746537 None:intergenic 60.0%
GTGCTCCAGATAGGGCAACG+AGG + chr4_2:21746518-21746537 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 21745166 21746917 21745166 ID=Msa0594320;Name=Msa0594320
chr4_2 mRNA 21745166 21746917 21745166 ID=Msa0594320-mRNA-1;Parent=Msa0594320;Name=Msa0594320-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0|0|1|1|1|3|0|321
chr4_2 exon 21746702 21746917 21746702 ID=Msa0594320-mRNA-1:exon:6010;Parent=Msa0594320-mRNA-1
chr4_2 exon 21746383 21746577 21746383 ID=Msa0594320-mRNA-1:exon:6009;Parent=Msa0594320-mRNA-1
chr4_2 exon 21745166 21745720 21745166 ID=Msa0594320-mRNA-1:exon:6008;Parent=Msa0594320-mRNA-1
chr4_2 CDS 21746702 21746917 21746702 ID=Msa0594320-mRNA-1:cds;Parent=Msa0594320-mRNA-1
chr4_2 CDS 21746383 21746577 21746383 ID=Msa0594320-mRNA-1:cds;Parent=Msa0594320-mRNA-1
chr4_2 CDS 21745166 21745720 21745166 ID=Msa0594320-mRNA-1:cds;Parent=Msa0594320-mRNA-1
Gene Sequence

>Msa0594320

ATGTCCTCACATAGGTATTTCTCAATGTTCTTCCAGGCAATAGTGTTGGCAGCTCTTGCAACAACAACATTTTCAGCACTCACAACAAATTACTATGATTACACATGCCCTAATGCTCTGAGCACTATTAGAAATGTTGTTGAAGCTGCAGTTCAAAGAGAGAACCGTATGGGTGGCTCTTTACTACGCTTGCATTTTCATGATTGCTTTGTTAACGGTTGTGATGGTTCACTTCTTCTAGACTCTACACCTTCCATGGACAGTGAAAAAAATGCAAATCCAAATATCAATTCAGCTAGAGGATTTGAAGTGATTGATGAGATTAAGGAATCTGTTGATAAAGCATGTGGAAAACCAGTTGTTTCTTGTGCAGACATATTGGCTGTAGCTGCAAGAGACTCCGTCGTTGCGTTAGGAGGACCATCATGGAAAGTGCAGCTAGGAAGAAGAGACTCAAAGACAGCAAGTCGTGCCGATGCAGATTCAGGCAACATCCCCGGACCATCATTCAGTCTTTCTCAACTCATCAAAAATTTCGACAACCAAGGCCTAAACGAAAAAGACCTCGTTGCCCTATCTGGAGCACACACTATTGGATTTTCGCGCTGTCTTTTATTTAGAGACCGAATCTACAATGACAAGAACATCGATGCAAACTTCGCAAAACAGCTTCAAGACATTTGTCCCAGAGAAGGAGGAGACTCCAACCTTGCAGCTCTAGACTGTGTTACACCGGCAAAATTTGATGTGTCATATTACCAGGAACTGATTAAAAAGAAAGGGCTTCTTCATTCGGATCAGGAATTATTAAATGGTGATTATACTGGATCGTTGGTTAGAAAATATAGGCGCGATACAAGTTCTTTCTACAACGACTTTGCGAAATCTATGATTAAGATGGGAAATATTATGACACTTACTGGGAGTCAAGGTGAAATTCGTTCAAACTGCAGGAGAGCCAATTAA

Protein sequence

>Msa0594320

MSSHRYFSMFFQAIVLAALATTTFSALTTNYYDYTCPNALSTIRNVVEAAVQRENRMGGSLLRLHFHDCFVNGCDGSLLLDSTPSMDSEKNANPNINSARGFEVIDEIKESVDKACGKPVVSCADILAVAARDSVVALGGPSWKVQLGRRDSKTASRADADSGNIPGPSFSLSQLIKNFDNQGLNEKDLVALSGAHTIGFSRCLLFRDRIYNDKNIDANFAKQLQDICPREGGDSNLAALDCVTPAKFDVSYYQELIKKKGLLHSDQELLNGDYTGSLVRKYRRDTSSFYNDFAKSMIKMGNIMTLTGSQGEIRSNCRRAN*