AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0025370

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0025370 MtrunA17_Chr1g0179801 88.976 381 20 3 1 364 1 376 0.0 678
Msa0025370 MtrunA17_Chr7g0265221 63.918 388 105 6 1 361 1 380 1.57e-175 493
Msa0025370 MtrunA17_Chr7g0250511 38.655 357 185 8 23 361 11 351 6.14e-78 243
Msa0025370 MtrunA17_Chr8g0345831 40.123 324 163 5 34 341 15 323 1.78e-69 221
Msa0025370 MtrunA17_Chr5g0426891 33.520 358 191 8 25 357 3 338 1.25e-64 209
Msa0025370 MtrunA17_Chr4g0050031 36.494 348 176 9 43 361 35 366 7.98e-62 202
Msa0025370 MtrunA17_Chr3g0128001 36.095 338 180 7 37 357 15 333 2.42e-60 197
Msa0025370 MtrunA17_Chr4g0006371 33.333 366 199 9 26 358 14 367 1.30e-55 186
Msa0025370 MtrunA17_Chr7g0242551 33.884 363 192 10 26 358 15 359 4.01e-55 185
Msa0025370 MtrunA17_Chr3g0126741 36.332 289 145 7 65 330 59 331 4.02e-55 185
Msa0025370 MtrunA17_Chr8g0375671 33.060 366 203 10 19 361 11 357 1.06e-54 184
Msa0025370 MtrunA17_Chr8g0375601 31.285 358 212 8 26 363 11 354 1.78e-54 183
Msa0025370 MtrunA17_Chr5g0421091 31.073 354 209 8 26 361 11 347 2.85e-53 179
Msa0025370 MtrunA17_Chr2g0314381 31.909 351 201 9 31 361 48 380 4.37e-53 180
Msa0025370 MtrunA17_Chr5g0420981 30.303 363 203 9 25 361 17 355 6.31e-53 179
Msa0025370 MtrunA17_Chr5g0420901 31.844 358 200 9 26 361 12 347 8.60e-53 178
Msa0025370 MtrunA17_Chr8g0375681 35.395 291 170 7 75 361 9 285 1.17e-52 176
Msa0025370 MtrunA17_Chr8g0365241 30.641 359 206 8 25 361 22 359 1.37e-52 178
Msa0025370 MtrunA17_Chr5g0423221 31.653 357 205 10 25 361 36 373 2.22e-51 175
Msa0025370 MtrunA17_Chr5g0420941 29.859 355 213 10 25 361 10 346 7.42e-51 173
Msa0025370 MtrunA17_Chr2g0314391 31.373 357 207 8 25 361 35 373 8.02e-51 174
Msa0025370 MtrunA17_Chr7g0239111 33.053 357 200 11 25 361 19 356 1.68e-50 172
Msa0025370 MtrunA17_Chr2g0314401 31.006 358 207 8 25 361 16 354 3.89e-50 171
Msa0025370 MtrunA17_Chr5g0423191 31.492 362 199 12 26 368 13 344 1.56e-49 170
Msa0025370 MtrunA17_Chr8g0375571 30.081 369 216 9 17 362 2 351 2.24e-49 169
Msa0025370 MtrunA17_Chr3g0113641 32.687 361 198 10 26 360 15 356 2.98e-49 169
Msa0025370 MtrunA17_Chr5g0421011 30.110 362 213 9 20 361 7 348 1.14e-48 167
Msa0025370 MtrunA17_Chr5g0423201 33.564 289 169 5 80 361 77 349 1.63e-48 167
Msa0025370 MtrunA17_Chr5g0420951 30.278 360 205 11 26 361 18 355 3.37e-48 166
Msa0025370 MtrunA17_Chr5g0421101 29.915 351 208 8 26 357 13 344 5.23e-48 166
Msa0025370 MtrunA17_Chr1g0184151 32.164 342 189 8 26 344 1 322 9.70e-48 165
Msa0025370 MtrunA17_Chr5g0423211 29.213 356 214 10 26 361 13 350 1.27e-47 165
Msa0025370 MtrunA17_Chr2g0311711 33.333 351 185 9 25 348 30 358 1.29e-47 165
Msa0025370 MtrunA17_Chr5g0412651 35.971 278 163 5 80 353 71 337 2.06e-47 164
Msa0025370 MtrunA17_Chr1g0170631 43.523 193 99 5 174 363 9 194 5.50e-47 158
Msa0025370 MtrunA17_Chr5g0412671 35.315 286 170 5 80 361 71 345 6.44e-47 163
Msa0025370 MtrunA17_Chr5g0423251 28.814 354 218 9 25 361 12 348 8.54e-47 162
Msa0025370 MtrunA17_Chr6g0472861 31.519 349 191 10 25 344 27 356 3.72e-46 161
Msa0025370 MtrunA17_Chr3g0109041 30.685 365 206 10 26 363 10 354 4.65e-46 160
Msa0025370 MtrunA17_Chr8g0336851 30.278 360 206 9 25 361 27 364 5.00e-46 161
Msa0025370 MtrunA17_Chr2g0311831 32.021 381 200 12 10 361 21 371 5.57e-46 161
Msa0025370 MtrunA17_Chr7g0239101 29.945 364 204 10 26 363 20 358 8.90e-46 160
Msa0025370 MtrunA17_Chr3g0093761 30.108 372 223 10 8 361 1 353 1.04e-45 160
Msa0025370 MtrunA17_Chr3g0093751 29.589 365 221 9 15 361 8 354 1.37e-45 159
Msa0025370 MtrunA17_Chr5g0437181 31.768 362 200 9 26 360 14 355 1.64e-45 159
Msa0025370 MtrunA17_Chr7g0266651 30.053 376 213 11 12 361 11 362 1.86e-45 159
Msa0025370 MtrunA17_Chr1g0184161 31.928 332 184 8 34 344 12 322 2.07e-45 159
Msa0025370 MtrunA17_Chr3g0093741 29.620 368 217 8 15 361 8 354 4.74e-45 158
Msa0025370 MtrunA17_Chr7g0225881 31.105 344 194 9 25 343 27 352 6.55e-45 158
Msa0025370 MtrunA17_Chr8g0354261 32.659 346 189 8 25 345 32 358 7.73e-45 158
Msa0025370 MtrunA17_Chr2g0296371 29.201 363 213 7 23 361 14 356 7.81e-45 157
Msa0025370 MtrunA17_Chr5g0412681 33.882 304 172 7 65 352 33 323 8.43e-45 157
Msa0025370 MtrunA17_Chr2g0311631 29.945 364 211 7 24 363 20 363 9.06e-45 157
Msa0025370 MtrunA17_Chr7g0239121 32.081 346 183 11 26 344 16 336 1.29e-44 157
Msa0025370 MtrunA17_Chr1g0184101 30.383 339 195 8 26 342 1 320 1.83e-44 156
Msa0025370 MtrunA17_Chr5g0398291 31.322 348 195 11 26 344 8 340 3.76e-44 155
Msa0025370 MtrunA17_Chr7g0239821 30.793 328 182 9 64 366 63 370 4.98e-44 155
Msa0025370 MtrunA17_Chr8g0336861 30.029 343 196 9 25 344 27 348 6.86e-44 155
Msa0025370 MtrunA17_Chr5g0421041 29.752 363 204 12 25 368 12 342 1.15e-43 154
Msa0025370 MtrunA17_Chr1g0187831 31.105 344 198 9 25 344 29 357 1.21e-43 155
Msa0025370 MtrunA17_Chr1g0187821 31.507 365 202 11 24 361 27 370 1.45e-43 154
Msa0025370 MtrunA17_Chr1g0184121 31.832 333 186 8 32 343 9 321 1.85e-43 154
Msa0025370 MtrunA17_Chr5g0424201 32.530 332 176 11 36 342 19 327 2.54e-43 153
Msa0025370 MtrunA17_Chr8g0371931 37.349 249 131 7 80 320 72 303 4.10e-43 153
Msa0025370 MtrunA17_Chr2g0311701 30.595 353 195 9 25 348 32 363 8.87e-43 152
Msa0025370 MtrunA17_Chr2g0311681 30.769 351 189 8 25 344 26 353 9.29e-43 152
Msa0025370 MtrunA17_Chr8g0354241 29.863 365 212 8 25 364 32 377 1.71e-42 152
Msa0025370 MtrunA17_Chr7g0239071 33.219 292 165 7 80 361 30 301 1.78e-42 150
Msa0025370 MtrunA17_Chr2g0311761 31.579 361 203 12 25 361 32 372 2.43e-42 151
Msa0025370 MtrunA17_Chr2g0311691 31.054 351 188 9 25 344 26 353 2.72e-42 151
Msa0025370 MtrunA17_Chr8g0348081 29.917 361 206 9 25 361 27 364 2.83e-42 151
Msa0025370 MtrunA17_Chr7g0220011 31.548 336 198 8 36 356 15 333 4.47e-42 149
Msa0025370 MtrunA17_Chr1g0161041 31.522 368 203 11 12 355 47 389 8.01e-42 150
Msa0025370 MtrunA17_Chr1g0204181 32.335 334 178 9 37 342 38 351 9.53e-42 150
Msa0025370 MtrunA17_Chr8g0371921 36.437 247 136 6 80 320 72 303 1.87e-41 149
Msa0025370 MtrunA17_Chr1g0184111 30.606 330 194 7 32 343 9 321 1.93e-41 148
Msa0025370 MtrunA17_Chr8g0336631 29.282 362 208 11 25 361 27 365 2.19e-41 149
Msa0025370 MtrunA17_Chr8g0336781 29.444 360 210 9 25 361 62 400 2.40e-41 149
Msa0025370 MtrunA17_Chr8g0336761 28.532 361 211 9 25 361 27 364 2.75e-41 148
Msa0025370 MtrunA17_Chr8g0370711 31.650 297 167 7 59 333 46 328 7.67e-41 147
Msa0025370 MtrunA17_Chr1g0187811 30.435 368 207 11 25 361 144 493 8.93e-41 150
Msa0025370 MtrunA17_Chr3g0145171 30.573 314 170 8 59 341 46 342 1.32e-40 146
Msa0025370 MtrunA17_Chr1g0161081 30.811 370 203 12 12 355 24 366 1.38e-40 147
Msa0025370 MtrunA17_Chr8g0370721 32.993 294 167 6 59 333 46 328 1.51e-40 146
Msa0025370 MtrunA17_Chr3g0126761 40.741 162 92 1 169 330 45 202 1.58e-40 143
Msa0025370 MtrunA17_Chr1g0184241 29.396 364 217 8 1 343 5 349 2.07e-40 146
Msa0025370 MtrunA17_Chr3g0102041 36.000 250 133 7 80 320 72 303 3.20e-40 145
Msa0025370 MtrunA17_Chr8g0375701 29.301 372 225 11 9 361 3 355 4.75e-40 145
Msa0025370 MtrunA17_Chr1g0162191 30.145 345 200 11 34 356 20 345 6.57e-40 144
Msa0025370 MtrunA17_Chr6g0474391 31.627 332 183 8 37 342 43 356 8.02e-40 145
Msa0025370 MtrunA17_Chr5g0424211 30.892 314 183 7 36 330 17 315 1.16e-39 143
Msa0025370 MtrunA17_Chr2g0311921 30.435 368 196 14 10 347 7 344 1.45e-39 144
Msa0025370 MtrunA17_Chr5g0405411 36.179 246 138 6 80 320 72 303 1.59e-39 143
Msa0025370 MtrunA17_Chr2g0332191 29.692 357 200 8 32 366 23 350 2.26e-39 143
Msa0025370 MtrunA17_Chr1g0161111 30.925 346 199 8 24 349 94 419 2.42e-39 144
Msa0025370 MtrunA17_Chr2g0311741 34.848 264 155 5 80 341 60 308 4.16e-39 142
Msa0025370 MtrunA17_Chr6g0455481 31.915 282 177 5 80 358 70 339 5.20e-39 142
Msa0025370 MtrunA17_Chr3g0125201 33.103 290 152 7 63 329 1 271 6.55e-39 140
Msa0025370 MtrunA17_Chr7g0235951 28.871 381 212 10 11 361 22 373 6.83e-39 142
Msa0025370 MtrunA17_Chr2g0311861 32.184 348 197 11 25 361 28 347 7.22e-39 141
Msa0025370 MtrunA17_Chr3g0114861 30.240 334 197 10 26 341 6 321 1.74e-38 140
Msa0025370 MtrunA17_Chr4g0066121 31.953 338 178 13 26 336 28 340 1.89e-38 141
Msa0025370 MtrunA17_Chr7g0232161 30.031 323 179 10 26 325 25 323 2.36e-38 139
Msa0025370 MtrunA17_Chr8g0336751 28.889 360 205 10 9 343 46 379 2.67e-38 141
Msa0025370 MtrunA17_Chr1g0191201 28.926 363 204 10 35 363 31 373 3.28e-38 140
Msa0025370 MtrunA17_Chr4g0045471 31.650 297 160 7 80 353 63 339 1.25e-37 138
Msa0025370 MtrunA17_Chr7g0247991 31.781 365 198 10 25 361 32 373 1.29e-37 139
Msa0025370 MtrunA17_Chr8g0364471 29.565 345 198 10 25 344 32 356 1.60e-37 139
Msa0025370 MtrunA17_Chr1g0167911 30.372 349 206 9 25 354 19 349 5.79e-37 137
Msa0025370 MtrunA17_Chr4g0055591 28.255 361 212 11 25 361 24 361 7.01e-37 136
Msa0025370 MtrunA17_Chr1g0158011 32.258 279 166 7 88 362 3 262 7.98e-37 134
Msa0025370 MtrunA17_Chr3g0130391 29.261 352 199 9 37 357 45 377 9.62e-37 137
Msa0025370 MtrunA17_Chr5g0420881 41.958 143 82 1 220 361 2 144 2.76e-36 129
Msa0025370 MtrunA17_Chr8g0335411 31.335 367 197 11 25 361 32 373 3.11e-36 135
Msa0025370 MtrunA17_Chr7g0235981 30.882 340 187 11 15 344 9 310 5.77e-36 133
Msa0025370 MtrunA17_Chr1g0167951 30.141 355 193 13 9 336 4 330 1.56e-35 133
Msa0025370 MtrunA17_Chr1g0167961 30.245 367 197 15 10 346 20 357 1.98e-35 133
Msa0025370 MtrunA17_Chr8g0351101 29.607 331 190 7 37 342 33 345 2.43e-35 132
Msa0025370 MtrunA17_Chr5g0420721 36.041 197 108 4 173 368 67 246 3.61e-35 129
Msa0025370 MtrunA17_Chr4g0045411 32.836 268 164 7 80 341 68 325 6.97e-35 131
Msa0025370 MtrunA17_Chr4g0045441 30.100 299 181 7 80 366 63 345 1.47e-34 130
Msa0025370 MtrunA17_Chr7g0239091 29.907 321 174 10 64 361 159 451 2.12e-34 132
Msa0025370 MtrunA17_Chr7g0220001 29.811 265 172 4 80 342 69 321 2.14e-34 129
Msa0025370 MtrunA17_Chr8g0362741 30.943 265 153 7 25 282 32 273 2.43e-34 128
Msa0025370 MtrunA17_Chr4g0064781 32.000 275 158 8 80 341 78 336 3.91e-34 129
Msa0025370 MtrunA17_Chr1g0162351 32.414 290 169 9 80 357 108 382 4.50e-34 130
Msa0025370 MtrunA17_Chr4g0045431 39.037 187 106 2 170 354 159 339 9.17e-34 128
Msa0025370 MtrunA17_Chr4g0045451 30.325 277 171 7 80 344 63 329 1.41e-33 127
Msa0025370 MtrunA17_Chr1g0162361 31.410 312 169 10 80 368 55 344 3.14e-33 126
Msa0025370 MtrunA17_Chr3g0145181 29.050 358 205 14 18 346 5 342 6.33e-33 125
Msa0025370 MtrunA17_Chr3g0125421 30.211 331 188 10 37 342 16 328 8.43e-33 125
Msa0025370 MtrunA17_Chr7g0265351 29.617 287 181 6 80 361 67 337 9.21e-33 125
Msa0025370 MtrunA17_Chr8g0336801 37.671 146 88 1 219 361 11 156 5.52e-32 118
Msa0025370 MtrunA17_Chr1g0162321 31.058 293 169 8 80 357 108 382 6.00e-32 124
Msa0025370 MtrunA17_Chr3g0087031 28.671 286 183 7 80 361 92 360 9.05e-31 120
Msa0025370 MtrunA17_Chr4g0011311 28.000 300 176 8 25 306 32 309 1.15e-30 119
Msa0025370 MtrunA17_Chr8g0384481 27.826 345 194 10 37 352 38 356 1.20e-30 120
Msa0025370 MtrunA17_Chr7g0236011 29.508 366 205 11 25 361 32 373 1.58e-30 119
Msa0025370 MtrunA17_Chr3g0121141 30.000 320 178 10 65 358 4 303 8.53e-30 116
Msa0025370 MtrunA17_Chr1g0167931 27.072 362 167 10 25 356 19 313 4.19e-29 114
Msa0025370 MtrunA17_Chr2g0314371 29.747 316 177 12 25 307 16 319 4.30e-29 115
Msa0025370 MtrunA17_Chr3g0145201 30.464 302 165 12 60 333 679 963 4.90e-29 119
Msa0025370 MtrunA17_Chr4g0075471 45.714 105 56 1 222 325 32 136 1.17e-28 109
Msa0025370 MtrunA17_Chr2g0289341 37.195 164 87 4 169 325 112 266 1.41e-28 113
Msa0025370 MtrunA17_Chr3g0114871 30.070 286 151 9 35 297 16 275 8.47e-28 110
Msa0025370 MtrunA17_Chr5g0439011 30.385 260 155 6 80 333 36 275 2.84e-27 109
Msa0025370 MtrunA17_Chr4g0066991 30.811 370 199 14 11 361 22 353 7.98e-27 109
Msa0025370 MtrunA17_Chr8g0384461 28.623 276 165 7 80 342 81 337 9.39e-27 109
Msa0025370 MtrunA17_Chr4g0045461 26.333 300 170 5 80 353 63 337 3.08e-25 105
Msa0025370 MtrunA17_Chr8g0336871 33.742 163 91 4 185 343 7 156 8.60e-25 99.4
Msa0025370 MtrunA17_Chr2g0319491 28.455 246 156 6 80 323 66 293 1.04e-24 102
Msa0025370 MtrunA17_Chr4g0053251 30.556 252 151 9 81 320 50 289 3.33e-24 101
Msa0025370 MtrunA17_Chr1g0148771 28.793 323 193 11 34 336 27 332 2.12e-23 99.8
Msa0025370 MtrunA17_Chr4g0068891 27.243 301 161 10 80 346 47 323 2.76e-23 99.0
Msa0025370 MtrunA17_Chr4g0064771 40.310 129 70 2 220 341 73 201 8.17e-23 95.1
Msa0025370 MtrunA17_Chr3g0092531 31.048 248 149 8 80 324 41 269 4.14e-22 95.5
Msa0025370 MtrunA17_Chr4g0037611 37.008 127 78 2 194 318 10 136 2.73e-21 90.1
Msa0025370 MtrunA17_Chr6g0488511 26.214 309 163 10 63 338 1 277 3.03e-21 92.8
Msa0025370 MtrunA17_Chr1g0194321 28.676 272 163 9 80 333 47 305 3.36e-21 93.2
Msa0025370 MtrunA17_Chr7g0233661 35.606 132 79 1 220 351 22 147 9.87e-21 87.8
Msa0025370 MtrunA17_Chr1g0158031 32.044 181 113 5 185 362 8 181 1.40e-20 88.2
Msa0025370 MtrunA17_Chr8g0358941 27.099 262 159 9 80 325 52 297 2.51e-20 90.9
Msa0025370 MtrunA17_Chr2g0285931 26.103 272 168 9 80 335 53 307 4.44e-20 90.1
Msa0025370 MtrunA17_Chr5g0394071 39.655 116 68 1 220 333 48 163 6.53e-20 86.3
Msa0025370 MtrunA17_Chr8g0364171 31.579 133 77 2 150 282 8 126 1.69e-19 84.0
Msa0025370 MtrunA17_Chr2g0293931 36.601 153 87 5 162 307 1 150 2.40e-19 85.5
Msa0025370 MtrunA17_Chr2g0313111 26.316 266 176 8 80 339 53 304 6.54e-19 86.7
Msa0025370 MtrunA17_Chr1g0158021 26.423 246 142 8 50 274 34 261 1.34e-18 84.7
Msa0025370 MtrunA17_Chr4g0004071 29.891 184 121 4 173 355 130 306 4.85e-18 84.0
Msa0025370 MtrunA17_Chr1g0161101 45.977 87 38 1 214 300 401 478 1.56e-17 84.0
Msa0025370 MtrunA17_Chr6g0486831 43.925 107 54 2 232 333 207 312 1.59e-17 82.8
Msa0025370 MtrunA17_Chr8g0375581 47.761 67 34 1 213 278 19 85 1.60e-17 76.6
Msa0025370 MtrunA17_Chr4g0055911 25.806 310 168 10 62 333 6 291 1.17e-16 80.1
Msa0025370 MtrunA17_Chr8g0389941 27.574 272 167 7 81 333 63 323 1.99e-16 79.7
Msa0025370 MtrunA17_Chr3g0105281 27.615 239 143 10 80 307 58 277 2.42e-16 79.0
Msa0025370 MtrunA17_Chr3g0092581 36.066 122 75 2 205 324 21 141 2.88e-16 76.3
Msa0025370 MtrunA17_Chr2g0311611 45.714 70 31 1 220 282 2 71 3.93e-16 72.4
Msa0025370 MtrunA17_Chr1g0170641 32.143 140 70 2 31 152 18 150 4.66e-16 75.1
Msa0025370 MtrunA17_Chr4g0004061 31.053 190 120 6 169 355 126 307 5.18e-16 78.2
Msa0025370 MtrunA17_Chr3g0138351 28.415 183 124 4 172 351 130 308 1.71e-15 76.6
Msa0025370 MtrunA17_Chr7g0219991 40.000 110 58 4 169 277 249 351 1.93e-15 76.6
Msa0025370 MtrunA17_Chr4g0052251 25.781 256 167 8 80 325 54 296 6.75e-15 75.1
Msa0025370 MtrunA17_Chr1g0167921 31.667 120 74 2 163 281 44 156 9.16e-15 71.6
Msa0025370 MtrunA17_Chr4g0009561 29.333 150 102 4 207 353 162 310 2.51e-14 73.2
Msa0025370 MtrunA17_Chr8g0336831 26.271 236 133 8 24 239 26 240 6.31e-14 70.9
Msa0025370 MtrunA17_Chr7g0247741 22.857 315 206 8 59 352 5 303 9.70e-13 68.6
Msa0025370 MtrunA17_Chr2g0319521 34.454 119 63 3 185 300 29 135 1.32e-12 64.7
Msa0025370 MtrunA17_Chr4g0009541 26.404 178 125 3 169 344 125 298 1.45e-12 67.8
Msa0025370 MtrunA17_Chr7g0256741 28.205 195 111 8 155 336 110 288 3.88e-12 66.6
Msa0025370 MtrunA17_Chr2g0311641 30.435 138 73 3 24 144 20 151 3.26e-11 61.6
Msa0025370 MtrunA17_Chr8g0348951 31.132 106 72 1 229 333 179 284 3.73e-11 63.5
Msa0025370 MtrunA17_Chr5g0407781 28.144 167 108 3 169 333 113 269 5.69e-11 62.8
Msa0025370 MtrunA17_Chr8g0375641 26.875 160 90 4 19 158 11 163 6.11e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0025370 AT2G36690.2 57.068 382 130 6 1 364 1 366 3.74e-149 426
Msa0025370 AT2G36690.1 57.068 382 130 6 1 364 1 366 3.74e-149 426
Msa0025370 AT3G60290.1 38.420 367 181 8 18 360 8 353 2.95e-80 250
Msa0025370 AT2G44800.1 38.997 359 174 8 29 363 19 356 1.04e-79 248
Msa0025370 AT4G10500.1 39.228 311 150 5 37 327 20 311 1.50e-68 219
Msa0025370 AT4G10490.1 38.037 326 159 6 22 327 7 309 1.77e-68 219
Msa0025370 AT5G07480.1 34.582 347 182 8 31 352 18 344 5.07e-61 200
Msa0025370 AT5G24530.1 37.086 302 150 8 28 309 4 285 2.81e-56 187
Msa0025370 AT2G38240.1 34.072 361 194 11 26 362 12 352 8.10e-54 181
Msa0025370 AT3G11180.1 32.479 351 208 6 26 358 56 395 1.08e-52 180
Msa0025370 AT1G55290.1 33.724 341 186 8 24 344 24 344 9.31e-51 174
Msa0025370 AT3G11180.2 31.921 354 208 7 26 357 56 398 1.47e-50 174
Msa0025370 AT5G05600.1 32.615 371 213 8 10 358 11 366 1.78e-48 168
Msa0025370 AT1G17010.1 31.111 360 208 10 25 361 16 358 4.93e-48 166
Msa0025370 AT4G25420.1 33.333 324 187 7 37 342 40 352 1.92e-47 165
Msa0025370 AT3G13610.1 30.994 342 193 8 24 344 25 344 1.05e-46 163
Msa0025370 AT5G07480.2 36.842 247 137 5 113 352 1 235 1.36e-46 159
Msa0025370 AT3G12900.1 31.157 337 195 8 24 342 20 337 1.33e-45 160
Msa0025370 AT1G17020.1 28.686 373 228 9 11 361 2 358 3.03e-45 159
Msa0025370 AT3G21420.1 31.148 366 208 10 23 361 14 362 5.82e-45 158
Msa0025370 AT3G55970.1 31.044 364 205 10 26 360 14 360 6.73e-45 158
Msa0025370 AT5G59530.1 32.277 347 180 12 25 341 23 344 1.24e-43 155
Msa0025370 AT4G25310.1 33.217 286 171 8 80 361 84 353 1.33e-43 154
Msa0025370 AT4G25300.1 33.217 286 174 6 80 361 84 356 2.50e-43 154
Msa0025370 AT1G06620.1 32.070 343 186 10 24 341 25 345 1.24e-42 152
Msa0025370 AT4G16330.2 34.201 269 157 7 80 343 93 346 1.30e-42 152
Msa0025370 AT5G43450.1 31.830 377 212 11 5 356 1 357 1.59e-42 152
Msa0025370 AT2G30840.1 30.623 369 192 12 9 344 8 345 5.33e-42 150
Msa0025370 AT1G04350.1 31.694 366 197 14 24 361 20 360 1.07e-41 150
Msa0025370 AT1G78550.1 28.613 346 212 8 31 357 23 352 1.21e-41 149
Msa0025370 AT3G51240.1 35.743 249 135 7 80 320 71 302 2.00e-41 149
Msa0025370 AT1G78550.2 31.429 280 178 6 80 357 7 274 2.19e-41 147
Msa0025370 AT1G06645.1 29.620 368 202 11 9 347 26 365 3.84e-41 149
Msa0025370 AT2G06960.1 45.509 167 72 3 185 351 1 148 5.87e-41 141
Msa0025370 AT1G03400.1 30.460 348 208 9 25 355 19 349 6.14e-41 147
Msa0025370 AT5G51810.1 31.804 327 184 8 37 342 42 350 3.40e-40 146
Msa0025370 AT5G43440.1 31.642 335 187 11 25 335 23 339 3.95e-40 145
Msa0025370 AT4G16330.1 33.588 262 155 6 101 358 9 255 1.02e-39 142
Msa0025370 AT1G06650.2 30.541 370 192 13 9 342 13 353 1.30e-39 144
Msa0025370 AT1G03410.2 30.994 342 195 10 24 341 18 342 1.73e-39 144
Msa0025370 AT2G30830.1 31.034 348 196 10 20 344 15 341 1.96e-39 144
Msa0025370 AT5G12270.1 32.368 380 213 12 5 361 1 359 3.12e-39 143
Msa0025370 AT1G03410.1 30.994 342 195 10 24 341 55 379 3.75e-39 144
Msa0025370 AT5G59540.1 30.747 348 185 11 25 341 24 346 5.64e-39 142
Msa0025370 AT2G30840.3 30.352 369 187 13 9 344 8 339 2.76e-38 140
Msa0025370 AT3G61400.1 28.312 385 228 11 1 356 1 366 3.27e-38 140
Msa0025370 AT4G22880.1 28.152 341 216 7 26 344 7 340 4.48e-37 137
Msa0025370 AT4G22880.2 28.152 341 216 7 26 344 7 340 4.48e-37 137
Msa0025370 AT4G22880.3 28.152 341 216 7 26 344 7 340 4.48e-37 137
Msa0025370 AT1G77330.1 30.233 301 174 7 63 342 1 286 4.61e-37 136
Msa0025370 AT3G51240.2 35.745 235 126 7 94 320 1 218 7.19e-37 134
Msa0025370 AT1G60980.1 29.518 332 190 8 37 342 36 349 2.21e-36 136
Msa0025370 AT5G07200.1 28.152 341 204 7 28 342 28 353 3.31e-36 135
Msa0025370 AT5G08640.2 30.793 328 185 9 36 341 18 325 3.71e-36 134
Msa0025370 AT5G08640.1 30.793 328 185 9 36 341 18 325 3.71e-36 134
Msa0025370 AT3G19010.1 31.092 357 198 13 41 366 8 347 1.18e-35 133
Msa0025370 AT3G19010.4 31.092 357 198 13 41 366 8 347 1.18e-35 133
Msa0025370 AT1G06640.1 29.121 364 205 12 9 342 13 353 1.34e-35 134
Msa0025370 AT4G25300.2 37.037 189 113 3 174 361 79 262 2.04e-35 130
Msa0025370 AT1G03400.2 28.191 376 208 10 25 355 19 377 3.66e-35 132
Msa0025370 AT1G04380.1 31.132 318 179 9 37 335 23 319 4.15e-35 132
Msa0025370 AT5G54000.2 32.171 258 158 5 80 333 79 323 1.22e-34 130
Msa0025370 AT5G20550.1 28.994 338 187 11 26 333 9 323 2.48e-34 130
Msa0025370 AT5G54000.1 31.641 256 158 5 82 333 1 243 5.66e-34 127
Msa0025370 AT2G25450.1 29.326 341 195 10 25 340 20 339 1.90e-33 127
Msa0025370 AT4G25420.2 32.692 260 146 7 37 278 40 288 3.28e-33 125
Msa0025370 AT1G49390.1 28.060 335 193 10 26 333 9 322 5.03e-33 126
Msa0025370 AT1G44090.1 29.814 322 180 9 37 332 43 344 1.38e-32 126
Msa0025370 AT1G06620.2 32.143 280 146 9 24 281 25 282 2.18e-32 123
Msa0025370 AT3G19010.3 28.530 347 190 9 41 366 8 317 4.61e-32 123
Msa0025370 AT5G05600.2 31.541 279 154 8 26 282 27 290 5.69e-32 122
Msa0025370 AT1G49390.2 30.268 261 155 7 82 333 1 243 7.41e-32 121
Msa0025370 AT2G30840.2 31.126 302 149 10 9 281 8 279 7.97e-32 122
Msa0025370 AT5G20400.1 27.190 331 201 8 26 333 9 322 2.09e-31 122
Msa0025370 AT1G15550.1 28.975 283 191 5 80 360 82 356 2.94e-31 122
Msa0025370 AT5G43440.2 30.605 281 156 9 25 284 23 285 4.11e-31 120
Msa0025370 AT3G19000.1 28.873 284 182 5 80 352 65 339 7.87e-31 120
Msa0025370 AT3G55970.2 31.119 286 151 10 26 282 14 282 8.04e-31 119
Msa0025370 AT5G43450.2 31.104 299 164 9 5 281 1 279 9.43e-31 119
Msa0025370 AT4G21200.1 28.929 280 162 6 61 321 38 299 1.17e-29 117
Msa0025370 AT1G80330.1 29.080 337 193 13 34 342 16 334 2.40e-29 116
Msa0025370 AT5G63590.1 31.227 269 164 6 80 338 42 299 3.71e-29 115
Msa0025370 AT1G80340.1 28.387 310 194 9 65 358 50 347 6.12e-29 115
Msa0025370 AT1G06650.1 29.321 324 173 10 9 301 13 311 2.84e-28 112
Msa0025370 AT1G12010.1 27.931 290 167 9 60 327 2 271 2.86e-28 112
Msa0025370 AT5G51810.2 31.481 270 146 8 37 285 42 293 5.03e-28 111
Msa0025370 AT5G59540.2 29.720 286 148 10 25 282 24 284 1.10e-27 110
Msa0025370 AT4G25310.2 29.371 286 154 9 80 361 84 325 3.96e-27 110
Msa0025370 AT1G62380.1 26.224 286 177 8 60 327 2 271 7.81e-27 108
Msa0025370 AT3G61400.2 27.687 307 178 9 1 282 1 288 5.10e-26 106
Msa0025370 AT5G43935.1 30.258 271 147 7 80 342 47 283 7.05e-26 105
Msa0025370 AT2G19590.1 27.972 286 167 8 60 325 6 272 5.01e-25 103
Msa0025370 AT1G50960.1 29.577 284 162 6 45 307 20 286 5.20e-25 104
Msa0025370 AT1G05010.1 37.975 158 85 4 174 325 117 267 6.27e-25 103
Msa0025370 AT1G06640.2 28.094 299 177 8 9 288 13 292 9.20e-25 103
Msa0025370 AT1G04380.2 28.409 264 152 7 37 284 23 265 1.85e-24 101
Msa0025370 AT1G06640.3 28.374 289 169 8 9 278 13 282 2.85e-24 101
Msa0025370 AT3G49620.1 31.660 259 140 10 81 320 76 316 1.26e-23 100
Msa0025370 AT3G50210.4 30.451 266 139 9 81 320 50 295 5.40e-23 98.6
Msa0025370 AT3G50210.1 30.451 266 139 9 81 320 50 295 5.40e-23 98.6
Msa0025370 AT3G50210.3 30.451 266 139 9 81 320 50 295 5.40e-23 98.6
Msa0025370 AT2G19590.2 30.952 252 147 8 80 325 27 257 1.11e-22 97.1
Msa0025370 AT5G63595.1 28.319 226 133 3 80 305 53 249 2.58e-22 95.9
Msa0025370 AT3G19010.2 31.136 273 141 12 41 282 8 264 3.16e-22 95.9
Msa0025370 AT1G78440.1 25.000 272 182 7 80 341 43 302 6.70e-22 95.5
Msa0025370 AT5G63600.1 26.061 330 193 10 51 357 19 320 1.90e-21 94.4
Msa0025370 AT4G21690.1 25.347 288 182 6 80 351 72 342 3.70e-21 93.6
Msa0025370 AT3G49630.1 29.008 262 143 8 81 320 51 291 7.16e-21 92.8
Msa0025370 AT5G63600.2 24.923 325 204 9 51 357 19 321 7.23e-21 92.4
Msa0025370 AT3G49630.3 29.008 262 143 8 81 320 47 287 1.01e-20 92.0
Msa0025370 AT3G46500.5 29.514 288 157 8 81 344 46 311 1.97e-20 91.3
Msa0025370 AT3G19000.2 27.477 222 141 5 80 290 65 277 1.13e-19 88.2
Msa0025370 AT5G63580.2 31.579 209 122 6 80 282 47 240 6.29e-18 82.8
Msa0025370 AT1G30040.1 24.254 268 186 7 80 341 56 312 6.29e-18 84.3
Msa0025370 AT5G63580.1 31.884 207 120 6 80 280 47 238 6.59e-18 82.8
Msa0025370 AT3G46500.4 40.171 117 64 2 233 344 60 175 1.69e-17 80.1
Msa0025370 AT3G50210.2 42.708 96 53 2 227 320 118 213 1.82e-17 81.6
Msa0025370 AT3G46500.7 29.675 246 128 7 81 302 46 270 6.78e-17 80.9
Msa0025370 AT3G46500.10 40.171 117 64 2 233 344 122 237 7.76e-17 79.7
Msa0025370 AT3G46500.1 40.171 117 64 2 233 344 122 237 7.76e-17 79.7
Msa0025370 AT1G02400.1 23.226 310 205 11 45 333 4 301 3.43e-16 79.0
Msa0025370 AT3G49630.2 39.130 115 67 3 208 320 105 218 5.21e-16 77.4
Msa0025370 AT3G47190.1 29.630 135 88 2 170 304 152 279 6.40e-16 78.2
Msa0025370 AT5G58660.1 31.579 171 101 6 174 340 168 326 7.08e-16 78.6
Msa0025370 AT3G46490.1 26.644 289 169 7 81 343 46 317 7.31e-16 78.2
Msa0025370 AT3G46480.1 40.678 118 64 2 232 344 155 271 4.59e-15 75.1
Msa0025370 AT3G46490.2 27.899 276 146 8 81 326 46 298 4.65e-15 75.5
Msa0025370 AT4G22870.1 37.895 95 58 1 251 344 2 96 5.52e-15 70.9
Msa0025370 AT2G34555.1 24.080 299 197 11 80 365 52 333 1.09e-14 74.7
Msa0025370 AT1G35190.2 39.286 112 62 2 237 343 179 289 1.57e-14 73.9
Msa0025370 AT1G35190.1 39.286 112 62 2 237 343 202 312 2.38e-14 73.6
Msa0025370 AT4G23340.2 28.261 138 95 2 216 349 44 181 3.96e-14 71.2
Msa0025370 AT1G52820.1 28.415 183 119 5 173 352 133 306 4.07e-14 72.8
Msa0025370 AT1G14130.1 25.969 258 168 8 80 333 37 275 6.00e-14 72.4
Msa0025370 AT3G46500.6 46.667 75 35 1 233 302 91 165 2.05e-13 68.9
Msa0025370 AT3G46500.8 46.667 75 35 1 233 302 91 165 2.05e-13 68.9
Msa0025370 AT4G16765.3 37.963 108 61 2 231 333 121 227 2.60e-13 69.3
Msa0025370 AT4G16765.5 37.037 108 62 2 231 333 75 181 3.84e-13 68.2
Msa0025370 AT3G46500.3 46.667 75 35 1 233 302 122 196 5.97e-13 68.2
Msa0025370 AT4G23340.1 27.660 141 98 2 216 352 162 302 6.59e-13 69.3
Msa0025370 AT4G16765.6 37.037 108 62 2 231 333 121 227 1.01e-12 67.8
Msa0025370 AT4G16765.1 37.037 108 62 2 231 333 121 227 1.01e-12 67.8
Msa0025370 AT4G16765.2 37.037 108 62 2 231 333 121 227 1.01e-12 67.8
Msa0025370 AT4G03050.2 31.746 126 84 2 229 352 271 396 1.08e-12 69.3
Msa0025370 AT4G03050.1 31.746 126 84 2 229 352 271 396 1.08e-12 69.3
Msa0025370 AT4G03070.1 26.646 319 203 14 55 352 2 310 3.16e-12 67.4
Msa0025370 AT4G22870.2 36.364 88 55 1 258 344 50 137 4.85e-12 63.9
Msa0025370 AT1G47990.1 27.941 204 119 8 174 361 122 313 1.08e-11 65.9
Msa0025370 AT1G14120.2 30.357 168 105 3 169 333 116 274 6.11e-11 63.2
Msa0025370 AT1G14120.1 30.357 168 105 3 169 333 116 274 6.11e-11 63.2
Msa0025370 AT1G14120.3 30.357 168 105 3 169 333 116 274 6.11e-11 63.2

Find 82 sgRNAs with CRISPR-Local

Find 218 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTCCCCATTGCCTGATTA+AGG 0.210502 1_1:-48393466 Msa0025370:intron
TGAAGGACTTGAGGCCTATT+TGG 0.218488 1_1:+48394267 None:intergenic
ACACTTATTTCTAAGGTTAA+TGG 0.222487 1_1:-48391871 Msa0025370:CDS
ACAACGAATGCATTATTAAT+AGG 0.241440 1_1:+48391609 None:intergenic
AAACCAAACACTTATTTCTA+AGG 0.253076 1_1:-48391878 Msa0025370:CDS
TGAACCATTGTTCTTGGAAT+TGG 0.275458 1_1:+48391640 None:intergenic
CTGATTTGATTGGTCCAAAT+AGG 0.288891 1_1:-48394281 Msa0025370:CDS
ATCGGTGTCTGCGTAACGTT+TGG 0.310799 1_1:+48390403 None:intergenic
GAATCTTCAGTATTCTTAAC+AGG 0.331015 1_1:+48394348 None:intergenic
GGACAATATTATCAAAGAAT+TGG 0.341222 1_1:-48391799 Msa0025370:CDS
TCACTAAATATTGTCATTCC+AGG 0.352095 1_1:+48394486 None:intergenic
GAACCGTGAACCATTGTTCT+TGG 0.352914 1_1:+48391634 None:intergenic
ATAGATTTCTCTGATTTGAT+TGG 0.378631 1_1:-48394291 Msa0025370:CDS
TACTTACCTCTTTCCTCAAA+TGG 0.387893 1_1:+48393606 None:intergenic
TATACCTAAACTCTCTACTA+TGG 0.399689 1_1:+48391845 None:intergenic
TTAAAATACACACCTTAATC+AGG 0.402000 1_1:+48393454 None:intergenic
GGAAGATGGAAGCCAGCTTA+TGG 0.408489 1_1:-48391778 Msa0025370:CDS
ATGAGAGCAGCAGTTCGATA+TGG 0.411261 1_1:-48393570 Msa0025370:CDS
AGGCAATGGGGAAGATAATC+AGG 0.411706 1_1:+48393474 None:intergenic
GTGAAGCAGCTAGTTGATAA+TGG 0.414485 1_1:-48394417 Msa0025370:CDS
TAACCTTAGAAATAAGTGTT+TGG 0.414596 1_1:+48391875 None:intergenic
ACTCTTTCTCTTGGTTTCGT+TGG 0.418266 1_1:+48390352 None:intergenic
TCGGTGTCTGCGTAACGTTT+GGG 0.421674 1_1:+48390404 None:intergenic
GAAGCCATAGTAGAGAGTTT+AGG 0.422645 1_1:-48391849 Msa0025370:CDS
GTCTGCGTAACGTTTGGGAT+TGG 0.431669 1_1:+48390409 None:intergenic
ACACACCTTAATCAGGCAAT+GGG 0.440448 1_1:+48393461 None:intergenic
CTCCAGAAAACTCTTTCTCT+TGG 0.443477 1_1:+48390343 None:intergenic
GGCAAGAAAAGTTTCAAAAT+CGG 0.448587 1_1:+48390385 None:intergenic
TTAATTAAAATGTAGGAAAG+TGG 0.466796 1_1:-48391919 Msa0025370:intron
AATACAAGAGTGTGCTACAT+AGG 0.473985 1_1:-48390532 Msa0025370:CDS
TGAAGCCAACAAAGAAGAAA+AGG 0.484492 1_1:-48391820 Msa0025370:CDS
GGCATCCCTAGGGTTAGGTC+AGG 0.492951 1_1:+48391726 None:intergenic
GATCTTCCATTTGAGGAAAG+AGG 0.501424 1_1:-48393612 Msa0025370:CDS
TATTTAGTGAAGATATCAAA+GGG 0.504869 1_1:-48394473 Msa0025370:CDS
AAATCAGAGAAATCTATGAT+TGG 0.515757 1_1:+48394297 None:intergenic
GGTTTCGTTGGTTGAAATGT+GGG 0.516096 1_1:+48390364 None:intergenic
ATTATCAAAGAATTGGAAGA+TGG 0.516585 1_1:-48391792 Msa0025370:CDS
GTTAGGTCAGGTTGAGGACA+TGG 0.520576 1_1:+48391738 None:intergenic
TGGTTTCGTTGGTTGAAATG+TGG 0.525695 1_1:+48390363 None:intergenic
TGTTTAAGGGACAAGTTCTA+CGG 0.529012 1_1:-48393250 Msa0025370:intron
CCTTCTTCAAGATGAGGTAG+AGG 0.529153 1_1:-48391673 Msa0025370:CDS
ATAGAAAATCAATTTCTGAA+TGG 0.536962 1_1:-48394441 Msa0025370:CDS
ATTCCAAGAACAATGGTTCA+CGG 0.541633 1_1:-48391637 Msa0025370:CDS
TAACATCTTCTGAGATCCCA+TGG 0.547430 1_1:+48393670 None:intergenic
AGGAATCCATAGTCAGAATG+AGG 0.549394 1_1:+48391702 None:intergenic
GGACAAGTTCTACGGATAGT+TGG 0.550319 1_1:-48393242 Msa0025370:CDS
AATCTATGATTGGTAGCTGT+AGG 0.551270 1_1:+48394307 None:intergenic
CCTCTACCTCATCTTGAAGA+AGG 0.552637 1_1:+48391673 None:intergenic
TACACACCTTAATCAGGCAA+TGG 0.559365 1_1:+48393460 None:intergenic
TTCTTAACAGGACGTTCAGA+AGG 0.564901 1_1:+48394360 None:intergenic
GTGTTTGGTTTCTTCTGCGT+AGG 0.567429 1_1:+48391890 None:intergenic
CTTCTTCAAGATGAGGTAGA+GGG 0.575550 1_1:-48391672 Msa0025370:CDS
TTGATAAAGGTGGTAAACCA+TGG 0.576959 1_1:-48393687 Msa0025370:intron
AATGCATTCGTTGTCAATGT+TGG 0.578383 1_1:-48391600 Msa0025370:CDS
ATACAAGAGTGTGCTACATA+GGG 0.579473 1_1:-48390531 Msa0025370:CDS
CCTCAACCTGACCTAACCCT+AGG 0.580697 1_1:-48391732 Msa0025370:CDS
AGATGTTATCAACAACATGA+TGG 0.583825 1_1:-48393655 Msa0025370:CDS
CCTAGGGTTAGGTCAGGTTG+AGG 0.589376 1_1:+48391732 None:intergenic
TGATAAAGGTGGTAAACCAT+GGG 0.593471 1_1:-48393686 Msa0025370:intron
ATTAAAATGTAGGAAAGTGG+CGG 0.593821 1_1:-48391916 Msa0025370:intron
GAAGATAATCAGGCAAAGGA+TGG 0.594394 1_1:+48393484 None:intergenic
TTAACAGGACGTTCAGAAGG+AGG 0.597751 1_1:+48394363 None:intergenic
CTCAACCTGACCTAACCCTA+GGG 0.597884 1_1:-48391731 Msa0025370:CDS
AGTTGATAATGGACTTCGTA+CGG 0.603305 1_1:-48394406 Msa0025370:CDS
AATGCTATGCAATGAAGCAA+TGG 0.614624 1_1:+48390478 None:intergenic
TTGGCTTTGTCAATGAGTGT+AGG 0.614803 1_1:+48390428 None:intergenic
ATATTGCATAACATGTCACC+TGG 0.616301 1_1:-48394504 None:intergenic
ATATTTAGTGAAGATATCAA+AGG 0.617640 1_1:-48394474 Msa0025370:CDS
CACACTCCTTCTTCAAGATG+AGG 0.627054 1_1:-48391679 Msa0025370:CDS
GGAATCCATAGTCAGAATGA+GGG 0.629331 1_1:+48391703 None:intergenic
TGGGGAAGATAATCAGGCAA+AGG 0.640332 1_1:+48393480 None:intergenic
AAGTCCAATTCCAAGAACAA+TGG 0.641965 1_1:-48391644 Msa0025370:CDS
CATCTTGAAGAAGGAGTGTG+AGG 0.647975 1_1:+48391682 None:intergenic
AGATGGAAGCCAGCTTATGG+CGG 0.651529 1_1:-48391775 Msa0025370:CDS
TTGTCAATGAGTGTAGGTGA+CGG 0.654799 1_1:+48390434 None:intergenic
CAATGTTGGTGATCACCTTG+AGG 0.661702 1_1:-48391586 Msa0025370:intron
GAATCCATAGTCAGAATGAG+GGG 0.688282 1_1:+48391704 None:intergenic
AACAACATGATGGATGTGTG+TGG 0.693738 1_1:-48393645 Msa0025370:CDS
AATCCATAGTCAGAATGAGG+GGG 0.703984 1_1:+48391705 None:intergenic
AGGTCAGGTTGAGGACATGG+TGG 0.710387 1_1:+48391741 None:intergenic
CACACCTTAATCAGGCAATG+GGG 0.715726 1_1:+48393462 None:intergenic
ATTTAGTGAAGATATCAAAG+GGG 0.746024 1_1:-48394472 Msa0025370:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAATAAATTATATAATA+TGG - chr1_1:48393950-48393969 Msa0025370:intron 0.0%
!! TGAAAAAAAATAAAATTGTA+CGG + chr1_1:48390788-48390807 None:intergenic 10.0%
!!! TAATATTTTGAACAATTATT+AGG + chr1_1:48391600-48391619 None:intergenic 10.0%
!! ATTGTATATATATACATTAA+GGG + chr1_1:48391923-48391942 None:intergenic 10.0%
!! AATTGTATATATATACATTA+AGG + chr1_1:48391924-48391943 None:intergenic 10.0%
!! CATTATATCAATAATAAATA+AGG - chr1_1:48392099-48392118 Msa0025370:intron 10.0%
!!! TTGATTTTTAATTAAAATGT+AGG - chr1_1:48392873-48392892 Msa0025370:intron 10.0%
!! TATAACAAGATAAATTATAT+TGG + chr1_1:48393763-48393782 None:intergenic 10.0%
!!! TGTGTATTATAATTTGTTTA+AGG - chr1_1:48391535-48391554 Msa0025370:intron 15.0%
!!! GTGTATTATAATTTGTTTAA+GGG - chr1_1:48391536-48391555 Msa0025370:intron 15.0%
!!! TTTTTAAAGATACAAATTAG+TGG - chr1_1:48392291-48392310 Msa0025370:intron 15.0%
!!! ATGATATATGTAATCATTTT+TGG - chr1_1:48393616-48393635 Msa0025370:CDS 15.0%
!!! TGATATATGTAATCATTTTT+GGG - chr1_1:48393617-48393636 Msa0025370:CDS 15.0%
!!! ATTTTCTTCTTTATTCTTTT+GGG - chr1_1:48393657-48393676 Msa0025370:CDS 15.0%
!! ATATTTAGTGAAGATATCAA+AGG - chr1_1:48390325-48390344 Msa0025370:CDS 20.0%
!! TATTTAGTGAAGATATCAAA+GGG - chr1_1:48390326-48390345 Msa0025370:CDS 20.0%
!! ATAGAAAATCAATTTCTGAA+TGG - chr1_1:48390358-48390377 Msa0025370:CDS 20.0%
!!! TTAACTATAACTAAGTTTTG+TGG + chr1_1:48390610-48390629 None:intergenic 20.0%
!!! AATTTGTAATTTGTCTGTAA+AGG - chr1_1:48390663-48390682 Msa0025370:intron 20.0%
!!! ATTTGTAATTTGTCTGTAAA+GGG - chr1_1:48390664-48390683 Msa0025370:intron 20.0%
!!! TAGTCTTTATTTTGCATTTA+TGG - chr1_1:48390812-48390831 Msa0025370:intron 20.0%
!!! AAATGAGTTTTTTTAGTCAT+TGG + chr1_1:48390854-48390873 None:intergenic 20.0%
!!! TTTTGTGTTTTGATTGATAA+AGG - chr1_1:48391099-48391118 Msa0025370:intron 20.0%
!! TACTTATAATTATGAAGAGA+AGG + chr1_1:48391724-48391743 None:intergenic 20.0%
!! TCTCTTCATAATTATAAGTA+TGG - chr1_1:48391724-48391743 Msa0025370:CDS 20.0%
!!! AAACAACACGTATTTTAAAA+CGG - chr1_1:48392188-48392207 Msa0025370:intron 20.0%
!! CAAAATTTAACCTAAAACAA+TGG - chr1_1:48392564-48392583 Msa0025370:intron 20.0%
!! AATTAGTAGATATACTTACA+AGG + chr1_1:48392616-48392635 None:intergenic 20.0%
!! AGTATATCTACTAATTTGAT+AGG - chr1_1:48392620-48392639 Msa0025370:intron 20.0%
!!! AATGTTTTTTTGTCAATGAA+TGG - chr1_1:48392659-48392678 Msa0025370:intron 20.0%
!!! ATGTTTTTTTGTCAATGAAT+GGG - chr1_1:48392660-48392679 Msa0025370:intron 20.0%
!! TCCCTCAAAAAAATTAATAT+AGG - chr1_1:48392688-48392707 Msa0025370:intron 20.0%
!!! CCCTATATTAATTTTTTTGA+GGG + chr1_1:48392692-48392711 None:intergenic 20.0%
!! CCCTCAAAAAAATTAATATA+GGG - chr1_1:48392689-48392708 Msa0025370:intron 20.0%
!!! TCCCTATATTAATTTTTTTG+AGG + chr1_1:48392693-48392712 None:intergenic 20.0%
!! ATACTATATTGTAATTGTTG+AGG + chr1_1:48392840-48392859 None:intergenic 20.0%
!! TTAATTAAAATGTAGGAAAG+TGG - chr1_1:48392880-48392899 Msa0025370:intron 20.0%
!! TTAAACTTACAACTAACTAA+TGG + chr1_1:48393253-48393272 None:intergenic 20.0%
!! TTAGTTAGTTGTAAGTTTAA+TGG - chr1_1:48393253-48393272 Msa0025370:intron 20.0%
!! GTAATCAGATATCATATAAT+TGG - chr1_1:48393363-48393382 Msa0025370:intron 20.0%
!!! TTAGTTTTGTCTTAACTAAT+AGG - chr1_1:48393531-48393550 Msa0025370:CDS 20.0%
!! TCTCTATAAATAAATCGTTA+TGG + chr1_1:48393595-48393614 None:intergenic 20.0%
!!! CATTTTCTTCTTTATTCTTT+TGG - chr1_1:48393656-48393675 Msa0025370:CDS 20.0%
!!! ATATTGGTACAAACTTATTT+TGG + chr1_1:48393747-48393766 None:intergenic 20.0%
!! TCTTAAAAAATATGTGTAGA+TGG + chr1_1:48393880-48393899 None:intergenic 20.0%
!! ATGTAATATTTAAACGTGTA+GGG + chr1_1:48393976-48393995 None:intergenic 20.0%
!! AATGTAATATTTAAACGTGT+AGG + chr1_1:48393977-48393996 None:intergenic 20.0%
!! GAAGAATTAACAACTTAAAT+AGG + chr1_1:48394211-48394230 None:intergenic 20.0%
! ATTTAGTGAAGATATCAAAG+GGG - chr1_1:48390327-48390346 Msa0025370:CDS 25.0%
! AAATCAGAGAAATCTATGAT+TGG + chr1_1:48390505-48390524 None:intergenic 25.0%
!! ATAGATTTCTCTGATTTGAT+TGG - chr1_1:48390508-48390527 Msa0025370:CDS 25.0%
!!! ACAATTTTTTTTTGCTAAGC+CGG + chr1_1:48390758-48390777 None:intergenic 25.0%
!!! TGCAACATGCAATATTTTTA+GGG + chr1_1:48390976-48390995 None:intergenic 25.0%
!!! ATTTTTTGATCTTCCATTTG+AGG - chr1_1:48391180-48391199 Msa0025370:intron 25.0%
! TTAAAATACACACCTTAATC+AGG + chr1_1:48391348-48391367 None:intergenic 25.0%
! CATAATCATATAATAAGTCC+TGG - chr1_1:48391478-48391497 Msa0025370:intron 25.0%
! TATTAGGTATCCATTTACAA+TGG + chr1_1:48391584-48391603 None:intergenic 25.0%
! AATCAACCAACTTTCTTAAT+TGG - chr1_1:48391641-48391660 Msa0025370:CDS 25.0%
! TTTGTACCAATTAAGAAAGT+TGG + chr1_1:48391650-48391669 None:intergenic 25.0%
! AATTATTTAGAGGACACAAT+TGG + chr1_1:48392059-48392078 None:intergenic 25.0%
!! ACAAATTAGTGGTCTTAATT+AGG - chr1_1:48392302-48392321 Msa0025370:intron 25.0%
! ATTAGGTTATGTTTGGTAAA+AGG - chr1_1:48392319-48392338 Msa0025370:intron 25.0%
!! TGTGAAGTTTGAAATCTTAA+AGG - chr1_1:48392359-48392378 Msa0025370:intron 25.0%
!! TATTTTCTTCTACTAACAGA+TGG + chr1_1:48392462-48392481 None:intergenic 25.0%
!!! AAACCAAACACTTATTTCTA+AGG - chr1_1:48392921-48392940 Msa0025370:intron 25.0%
! TAACCTTAGAAATAAGTGTT+TGG + chr1_1:48392927-48392946 None:intergenic 25.0%
!!! ACACTTATTTCTAAGGTTAA+TGG - chr1_1:48392928-48392947 Msa0025370:intron 25.0%
! GGACAATATTATCAAAGAAT+TGG - chr1_1:48393000-48393019 Msa0025370:intron 25.0%
! ATTATCAAAGAATTGGAAGA+TGG - chr1_1:48393007-48393026 Msa0025370:intron 25.0%
! ACAACGAATGCATTATTAAT+AGG + chr1_1:48393193-48393212 None:intergenic 25.0%
! CATAAAACAATAAACTCTCA+TGG - chr1_1:48393422-48393441 Msa0025370:intron 25.0%
! ATGAAATTCTGATATTCCAA+TGG - chr1_1:48393500-48393519 Msa0025370:CDS 25.0%
! AAAACTAAAGAATCTACCAT+TGG + chr1_1:48393519-48393538 None:intergenic 25.0%
! ATCTTACCATTGAGTTAAAA+TGG - chr1_1:48394059-48394078 Msa0025370:intron 25.0%
TCACTAAATATTGTCATTCC+AGG + chr1_1:48390316-48390335 None:intergenic 30.0%
GAATCTTCAGTATTCTTAAC+AGG + chr1_1:48390454-48390473 None:intergenic 30.0%
AAGCATTAGCTAATGATTGA+AGG + chr1_1:48390552-48390571 None:intergenic 30.0%
!!! CAATTTTTTTTTGCTAAGCC+GGG + chr1_1:48390757-48390776 None:intergenic 30.0%
! GTGCAACATGCAATATTTTT+AGG + chr1_1:48390977-48390996 None:intergenic 30.0%
!!! TGTGTTTTGATTGATAAAGG+TGG - chr1_1:48391102-48391121 Msa0025370:intron 30.0%
AGATGTTATCAACAACATGA+TGG - chr1_1:48391144-48391163 Msa0025370:intron 30.0%
!! CAAAAGACAAAGTGTTTTGT+TGG - chr1_1:48391269-48391288 Msa0025370:intron 30.0%
TAATCAATTCAATCTCTACG+TGG - chr1_1:48391395-48391414 Msa0025370:intron 30.0%
CTCTTCAATAAATTAGTACC+AGG + chr1_1:48391499-48391518 None:intergenic 30.0%
TTGGTACAAATTTGTCAATG+AGG - chr1_1:48391660-48391679 Msa0025370:CDS 30.0%
AACAAATGCAGCACTTATTA+AGG - chr1_1:48391754-48391773 Msa0025370:CDS 30.0%
AAATGTTAAAGAATGCCCAT+AGG + chr1_1:48391900-48391919 None:intergenic 30.0%
!! AAACGACACTCATTTTGAAA+CGG + chr1_1:48391968-48391987 None:intergenic 30.0%
! AGTGTCACTCAATTATTTAG+AGG + chr1_1:48392069-48392088 None:intergenic 30.0%
GGTCTTAATTAGGTTATGTT+TGG - chr1_1:48392312-48392331 Msa0025370:intron 30.0%
ATATCATCACTAGTACGTAA+TGG - chr1_1:48392515-48392534 Msa0025370:intron 30.0%
ATTAAAATGTAGGAAAGTGG+CGG - chr1_1:48392883-48392902 Msa0025370:intron 30.0%
TATACCTAAACTCTCTACTA+TGG + chr1_1:48392957-48392976 None:intergenic 30.0%
! ATTGTCCTTTTCTTCTTTGT+TGG + chr1_1:48392987-48393006 None:intergenic 30.0%
!!! TCATTTTTGGGACAACTTTT+AGG - chr1_1:48393629-48393648 Msa0025370:CDS 30.0%
!!! GGCTTTGTTGTTAGAAATTT+TGG + chr1_1:48394033-48394052 None:intergenic 30.0%
ACTCAATGGTAAGATAAGTT+TGG + chr1_1:48394054-48394073 None:intergenic 30.0%
ACAAAATTAAGTGTGAACTG+TGG - chr1_1:48394128-48394147 Msa0025370:intron 30.0%
GGCAAGAAAAGTTTCAAAAT+CGG + chr1_1:48394417-48394436 None:intergenic 30.0%
!! AGTTGATAATGGACTTCGTA+CGG - chr1_1:48390393-48390412 Msa0025370:CDS 35.0%
!!! GGAGGAAGTATGTACTTTTT+TGG + chr1_1:48390421-48390440 None:intergenic 35.0%
! AATCTATGATTGGTAGCTGT+AGG + chr1_1:48390495-48390514 None:intergenic 35.0%
! CTGATTTGATTGGTCCAAAT+AGG - chr1_1:48390518-48390537 Msa0025370:CDS 35.0%
! TGAACGTTATGGATTTTTCC+AGG - chr1_1:48390573-48390592 Msa0025370:intron 35.0%
TTGATAAAGGTGGTAAACCA+TGG - chr1_1:48391112-48391131 Msa0025370:intron 35.0%
TGATAAAGGTGGTAAACCAT+GGG - chr1_1:48391113-48391132 Msa0025370:intron 35.0%
TACTTACCTCTTTCCTCAAA+TGG + chr1_1:48391196-48391215 None:intergenic 35.0%
TGTTTAAGGGACAAGTTCTA+CGG - chr1_1:48391549-48391568 Msa0025370:intron 35.0%
GATAGTTGGTCCATTGTAAA+TGG - chr1_1:48391571-48391590 Msa0025370:intron 35.0%
!! ACCTAAAACAATGGTTTTGC+TGG - chr1_1:48392573-48392592 Msa0025370:intron 35.0%
TGAAGCCAACAAAGAAGAAA+AGG - chr1_1:48392979-48392998 Msa0025370:intron 35.0%
AAGTCCAATTCCAAGAACAA+TGG - chr1_1:48393155-48393174 Msa0025370:intron 35.0%
TGAACCATTGTTCTTGGAAT+TGG + chr1_1:48393162-48393181 None:intergenic 35.0%
ATTCCAAGAACAATGGTTCA+CGG - chr1_1:48393162-48393181 Msa0025370:intron 35.0%
AATGCATTCGTTGTCAATGT+TGG - chr1_1:48393199-48393218 Msa0025370:intron 35.0%
AAAACACTAGAGAGAGAAAG+AGG - chr1_1:48393682-48393701 Msa0025370:intron 35.0%
AAACACTAGAGAGAGAAAGA+GGG - chr1_1:48393683-48393702 Msa0025370:intron 35.0%
ACCATTGAGTTAAAATGGCA+TGG - chr1_1:48394064-48394083 Msa0025370:intron 35.0%
!!! TCCATGCCATTTTAACTCAA+TGG + chr1_1:48394068-48394087 None:intergenic 35.0%
!!! GCTTCTCAGATTTTTAGCAA+CGG - chr1_1:48394242-48394261 Msa0025370:intron 35.0%
!!! CTTCTCAGATTTTTAGCAAC+GGG - chr1_1:48394243-48394262 Msa0025370:intron 35.0%
! AATACAAGAGTGTGCTACAT+AGG - chr1_1:48394267-48394286 Msa0025370:intron 35.0%
! ATACAAGAGTGTGCTACATA+GGG - chr1_1:48394268-48394287 Msa0025370:intron 35.0%
AATGCTATGCAATGAAGCAA+TGG + chr1_1:48394324-48394343 None:intergenic 35.0%
! AACCAAGAGAAAGAGTTTTC+TGG - chr1_1:48394454-48394473 Msa0025370:CDS 35.0%
!! GTGAAGCAGCTAGTTGATAA+TGG - chr1_1:48390382-48390401 Msa0025370:CDS 40.0%
TTCTTAACAGGACGTTCAGA+AGG + chr1_1:48390442-48390461 None:intergenic 40.0%
!!! TGGTAGCTGTAGGTTTTGTT+TGG + chr1_1:48390485-48390504 None:intergenic 40.0%
GCTAATGATTGAAGGACTTG+AGG + chr1_1:48390544-48390563 None:intergenic 40.0%
GCTAATGCTTGTGAACGTTA+TGG - chr1_1:48390562-48390581 Msa0025370:intron 40.0%
! GTAAAGGGTATGAGTGTCTT+CGG - chr1_1:48390679-48390698 Msa0025370:intron 40.0%
! TAAAGGGTATGAGTGTCTTC+GGG - chr1_1:48390680-48390699 Msa0025370:intron 40.0%
! TTGATACCTGTCATTTCTCC+CGG - chr1_1:48390736-48390755 Msa0025370:intron 40.0%
!! TAACATCTTCTGAGATCCCA+TGG + chr1_1:48391132-48391151 None:intergenic 40.0%
!! AACAACATGATGGATGTGTG+TGG - chr1_1:48391154-48391173 Msa0025370:intron 40.0%
GATCTTCCATTTGAGGAAAG+AGG - chr1_1:48391187-48391206 Msa0025370:intron 40.0%
GAAGATAATCAGGCAAAGGA+TGG + chr1_1:48391318-48391337 None:intergenic 40.0%
ACACACCTTAATCAGGCAAT+GGG + chr1_1:48391341-48391360 None:intergenic 40.0%
TACACACCTTAATCAGGCAA+TGG + chr1_1:48391342-48391361 None:intergenic 40.0%
! TGTCAATGAGGTCTTATACC+TGG - chr1_1:48391672-48391691 Msa0025370:CDS 40.0%
! GTCAATGAGGTCTTATACCT+GGG - chr1_1:48391673-48391692 Msa0025370:CDS 40.0%
! CCATAGGACATTGGTTAAGA+GGG + chr1_1:48391884-48391903 None:intergenic 40.0%
CCTCTTAACCAATGTCCTAT+GGG - chr1_1:48391882-48391901 Msa0025370:CDS 40.0%
AAAGAATGCCCATAGGACAT+TGG + chr1_1:48391893-48391912 None:intergenic 40.0%
ATCATTGTCACAGATGTGCT+TGG + chr1_1:48392408-48392427 None:intergenic 40.0%
! GCCAGCAAAACCATTGTTTT+AGG + chr1_1:48392577-48392596 None:intergenic 40.0%
GAAGCCATAGTAGAGAGTTT+AGG - chr1_1:48392950-48392969 Msa0025370:intron 40.0%
AAAAATTTGCCGCCATAAGC+TGG + chr1_1:48393036-48393055 None:intergenic 40.0%
AATCCATAGTCAGAATGAGG+GGG + chr1_1:48393097-48393116 None:intergenic 40.0%
GAATCCATAGTCAGAATGAG+GGG + chr1_1:48393098-48393117 None:intergenic 40.0%
GGAATCCATAGTCAGAATGA+GGG + chr1_1:48393099-48393118 None:intergenic 40.0%
AGGAATCCATAGTCAGAATG+AGG + chr1_1:48393100-48393119 None:intergenic 40.0%
CTTCTTCAAGATGAGGTAGA+GGG - chr1_1:48393127-48393146 Msa0025370:intron 40.0%
GAATATCCATCCATACCTCA+AGG + chr1_1:48393231-48393250 None:intergenic 40.0%
GGTCACTAATTGTAGATGAC+AGG + chr1_1:48393574-48393593 None:intergenic 40.0%
TTGTCAATGAGTGTAGGTGA+CGG + chr1_1:48394368-48394387 None:intergenic 40.0%
!! TTGGCTTTGTCAATGAGTGT+AGG + chr1_1:48394374-48394393 None:intergenic 40.0%
! GGTTTCGTTGGTTGAAATGT+GGG + chr1_1:48394438-48394457 None:intergenic 40.0%
! TGGTTTCGTTGGTTGAAATG+TGG + chr1_1:48394439-48394458 None:intergenic 40.0%
ACTCTTTCTCTTGGTTTCGT+TGG + chr1_1:48394450-48394469 None:intergenic 40.0%
CTCCAGAAAACTCTTTCTCT+TGG + chr1_1:48394459-48394478 None:intergenic 40.0%
!!! GAAAGAGTTTTCTGGAGTCT+AGG - chr1_1:48394462-48394481 Msa0025370:CDS 40.0%
TTAACAGGACGTTCAGAAGG+AGG + chr1_1:48390439-48390458 None:intergenic 45.0%
TGAAGGACTTGAGGCCTATT+TGG + chr1_1:48390535-48390554 None:intergenic 45.0%
TTTGTGGTTGATTGCTCACC+TGG + chr1_1:48390594-48390613 None:intergenic 45.0%
! AAAGGGTATGAGTGTCTTCG+GGG - chr1_1:48390681-48390700 Msa0025370:intron 45.0%
GGGAGAAATGACAGGTATCA+AGG + chr1_1:48390737-48390756 None:intergenic 45.0%
ATGAGAGCAGCAGTTCGATA+TGG - chr1_1:48391229-48391248 Msa0025370:intron 45.0%
TGGGGAAGATAATCAGGCAA+AGG + chr1_1:48391322-48391341 None:intergenic 45.0%
AGGCAATGGGGAAGATAATC+AGG + chr1_1:48391328-48391347 None:intergenic 45.0%
TCTTCCCCATTGCCTGATTA+AGG - chr1_1:48391333-48391352 Msa0025370:intron 45.0%
CACACCTTAATCAGGCAATG+GGG + chr1_1:48391340-48391359 None:intergenic 45.0%
GGACAAGTTCTACGGATAGT+TGG - chr1_1:48391557-48391576 Msa0025370:intron 45.0%
! GAGGTCTTATACCTGGGAAA+TGG - chr1_1:48391679-48391698 Msa0025370:CDS 45.0%
ACCTGGGAAATGGAAAGTAG+TGG - chr1_1:48391689-48391708 Msa0025370:CDS 45.0%
ACCACTACTTTCCATTTCCC+AGG + chr1_1:48391693-48391712 None:intergenic 45.0%
CCCTCTTAACCAATGTCCTA+TGG - chr1_1:48391881-48391900 Msa0025370:CDS 45.0%
! CCCATAGGACATTGGTTAAG+AGG + chr1_1:48391885-48391904 None:intergenic 45.0%
! TGCTGGCCTGATGATTCATA+CGG - chr1_1:48392590-48392609 Msa0025370:intron 45.0%
ACAAGGCCGTATGAATCATC+AGG + chr1_1:48392599-48392618 None:intergenic 45.0%
TTCCCAACAAAGTTGCAACG+AGG - chr1_1:48392778-48392797 Msa0025370:intron 45.0%
TCCCAACAAAGTTGCAACGA+GGG - chr1_1:48392779-48392798 Msa0025370:intron 45.0%
! GTGTTTGGTTTCTTCTGCGT+AGG + chr1_1:48392912-48392931 None:intergenic 45.0%
! CATCTTGAAGAAGGAGTGTG+AGG + chr1_1:48393120-48393139 None:intergenic 45.0%
CACACTCCTTCTTCAAGATG+AGG - chr1_1:48393120-48393139 Msa0025370:intron 45.0%
CCTCTACCTCATCTTGAAGA+AGG + chr1_1:48393129-48393148 None:intergenic 45.0%
CCTTCTTCAAGATGAGGTAG+AGG - chr1_1:48393126-48393145 Msa0025370:intron 45.0%
GAACCGTGAACCATTGTTCT+TGG + chr1_1:48393168-48393187 None:intergenic 45.0%
!! CAATGTTGGTGATCACCTTG+AGG - chr1_1:48393213-48393232 Msa0025370:intron 45.0%
! TTGGTGATCACCTTGAGGTA+TGG - chr1_1:48393218-48393237 Msa0025370:intron 45.0%
TGATCACCTTGAGGTATGGA+TGG - chr1_1:48393222-48393241 Msa0025370:intron 45.0%
!!! TAAAAACATATATTTTTTTA+AGG + chr1_1:48390634-48390653 None:intergenic 5.0%
!! TGTATAAATTAATAAAAATA+TGG - chr1_1:48390876-48390895 Msa0025370:intron 5.0%
!!! AAATTAAATAAATTTTTTGT+TGG - chr1_1:48390903-48390922 Msa0025370:intron 5.0%
!!! AATTAAATAAATTTTTTGTT+GGG - chr1_1:48390904-48390923 Msa0025370:intron 5.0%
!!! ATTATTTATATTTTTATGAT+AGG + chr1_1:48393850-48393869 None:intergenic 5.0%
!! TTTATTTCATATAAAATTTA+TGG + chr1_1:48393918-48393937 None:intergenic 5.0%
! TTCGGGGTGTCAACCTAGTT+GGG - chr1_1:48390697-48390716 Msa0025370:intron 50.0%
GCCCTCGTTGCAACTTTGTT+GGG + chr1_1:48392783-48392802 None:intergenic 50.0%
TGCCCTCGTTGCAACTTTGT+TGG + chr1_1:48392784-48392803 None:intergenic 50.0%
GGAAGATGGAAGCCAGCTTA+TGG - chr1_1:48393021-48393040 Msa0025370:intron 50.0%
AGATGGAAGCCAGCTTATGG+CGG - chr1_1:48393024-48393043 Msa0025370:intron 50.0%
!! GTTAGGTCAGGTTGAGGACA+TGG + chr1_1:48393064-48393083 None:intergenic 50.0%
CTCAACCTGACCTAACCCTA+GGG - chr1_1:48393068-48393087 Msa0025370:intron 50.0%
ATGCCCCCTCATTCTGACTA+TGG - chr1_1:48393091-48393110 Msa0025370:intron 50.0%
! GTCTGCGTAACGTTTGGGAT+TGG + chr1_1:48394393-48394412 None:intergenic 50.0%
! TCGGTGTCTGCGTAACGTTT+GGG + chr1_1:48394398-48394417 None:intergenic 50.0%
! ATCGGTGTCTGCGTAACGTT+TGG + chr1_1:48394399-48394418 None:intergenic 50.0%
! CTTCGGGGTGTCAACCTAGT+TGG - chr1_1:48390696-48390715 Msa0025370:intron 55.0%
GAGTCGTCGACATCCCAACT+AGG + chr1_1:48390713-48390732 None:intergenic 55.0%
GCTAAGCCGGGAGAAATGAC+AGG + chr1_1:48390745-48390764 None:intergenic 55.0%
!! AGGTCAGGTTGAGGACATGG+TGG + chr1_1:48393061-48393080 None:intergenic 55.0%
! CCTAGGGTTAGGTCAGGTTG+AGG + chr1_1:48393070-48393089 None:intergenic 55.0%
CCTCAACCTGACCTAACCCT+AGG - chr1_1:48393067-48393086 Msa0025370:intron 55.0%
!! AGAATGAGGGGGCATCCCTA+GGG + chr1_1:48393086-48393105 None:intergenic 55.0%
GGCATCCCTAGGGTTAGGTC+AGG + chr1_1:48393076-48393095 None:intergenic 60.0%
!! CAGAATGAGGGGGCATCCCT+AGG + chr1_1:48393087-48393106 None:intergenic 60.0%
!! GAGGGGGCATCCCTAGGGTT+AGG + chr1_1:48393081-48393100 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 48390307 48394514 48390307 ID=Msa0025370;Name=Msa0025370
chr1_1 mRNA 48390307 48394514 48390307 ID=Msa0025370-mRNA-1;Parent=Msa0025370;Name=Msa0025370-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0|0|0.8|1|1|5|0|368
chr1_1 exon 48394275 48394514 48394275 ID=Msa0025370-mRNA-1:exon:13933;Parent=Msa0025370-mRNA-1
chr1_1 exon 48393467 48393700 48393467 ID=Msa0025370-mRNA-1:exon:13932;Parent=Msa0025370-mRNA-1
chr1_1 exon 48393236 48393264 48393236 ID=Msa0025370-mRNA-1:exon:13931;Parent=Msa0025370-mRNA-1
chr1_1 exon 48391587 48391926 48391587 ID=Msa0025370-mRNA-1:exon:13930;Parent=Msa0025370-mRNA-1
chr1_1 exon 48390307 48390570 48390307 ID=Msa0025370-mRNA-1:exon:13929;Parent=Msa0025370-mRNA-1
chr1_1 CDS 48394275 48394514 48394275 ID=Msa0025370-mRNA-1:cds;Parent=Msa0025370-mRNA-1
chr1_1 CDS 48393467 48393700 48393467 ID=Msa0025370-mRNA-1:cds;Parent=Msa0025370-mRNA-1
chr1_1 CDS 48393236 48393264 48393236 ID=Msa0025370-mRNA-1:cds;Parent=Msa0025370-mRNA-1
chr1_1 CDS 48391587 48391926 48391587 ID=Msa0025370-mRNA-1:cds;Parent=Msa0025370-mRNA-1
chr1_1 CDS 48390307 48390570 48390307 ID=Msa0025370-mRNA-1:cds;Parent=Msa0025370-mRNA-1
Gene Sequence

>Msa0025370

ATGTCACCTGGAATGACAATATTTAGTGAAGATATCAAAGGGGTCGATGATATAGAAAATCAATTTCTGAATGGAGTGAAGCAGCTAGTTGATAATGGACTTCGTACGGTACCAAAAAAGTACATACTTCCTCCTTCTGAACGTCCTGTTAAGAATACTGAAGATTCAAATTTTGCCAAACAAAACCTACAGCTACCAATCATAGATTTCTCTGATTTGATTGGTCCAAATAGGCCTCAAGTGGTAAACCATGGGATCTCAGAAGATGTTATCAACAACATGATGGATGTGTGTGGAAAATTTTTTGATCTTCCATTTGAGGAAAGAGGTAAGTACATGACATCTGATATGAGAGCAGCAGTTCGATATGGAACTAGCTTTAGTCAAACAAAAGACAAAGTGTTTTGTTGGAGAGATTTCTTGAAACTTATCTGCCATCCTTTGCCTGATTATCTTCCCCATTGCCTGATTAAGGGACAAGTTCTACGGATAGTTGGTCCATTGAAAGTGGCGGCTACCTACGCAGAAGAAACCAAACACTTATTTCTAAGGTTAATGGAAGCCATAGTAGAGAGTTTAGGTATAGTTGAAGCCAACAAAGAAGAAAAGGACAATATTATCAAAGAATTGGAAGATGGAAGCCAGCTTATGGCGGCAAATTTTTATCCACCATGTCCTCAACCTGACCTAACCCTAGGGATGCCCCCTCATTCTGACTATGGATTCCTCACACTCCTTCTTCAAGATGAGGTAGAGGGTTTGCAAGTCCAATTCCAAGAACAATGGTTCACGGTTCAACCTATTAATAATGCATTCGTTGTCAATGTTGGTGATCACCTTGAGATTTTTAGCAACGGGAAATACAAGAGTGTGCTACATAGGGTTCTAGTGAATTCAAGTAAGCGTAGAAGATCCATTGCTTCATTGCATAGCATTTCGTTCAACAGTACTGTGAGACCGTCACCTACACTCATTGACAAAGCCAATCCCAAACGTTACGCAGACACCGATTTTGAAACTTTTCTTGCCCACATTTCAACCAACGAAACCAAGAGAAAGAGTTTTCTGGAGTCTAGGAAATTGACTTCTATCTCAGTACTTGACTAA
Protein sequence

>Msa0025370

MSPGMTIFSEDIKGVDDIENQFLNGVKQLVDNGLRTVPKKYILPPSERPVKNTEDSNFAKQNLQLPIIDFSDLIGPNRPQVVNHGISEDVINNMMDVCGKFFDLPFEERGKYMTSDMRAAVRYGTSFSQTKDKVFCWRDFLKLICHPLPDYLPHCLIKGQVLRIVGPLKVAATYAEETKHLFLRLMEAIVESLGIVEANKEEKDNIIKELEDGSQLMAANFYPPCPQPDLTLGMPPHSDYGFLTLLLQDEVEGLQVQFQEQWFTVQPINNAFVVNVGDHLEIFSNGKYKSVLHRVLVNSSKRRRSIASLHSISFNSTVRPSPTLIDKANPKRYADTDFETFLAHISTNETKRKSFLESRKLTSISVLD*