Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0072940 | sp|Q6YYX9|SLC1_ORYSJ | 39.572 | 374 | 174 | 4 | 1 | 328 | 15 | 382 | 1.51e-91 | 281 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0072940 | G7IA69 | 84.309 | 376 | 14 | 3 | 1 | 331 | 1 | 376 | 0.0 | 631 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0025370 | Msa0072940 | 0.860264 | 2.331907e-63 | -8.615850e-47 |
Msa0040210 | Msa0072940 | 0.803051 | 4.192463e-49 | -8.615850e-47 |
Msa0040360 | Msa0072940 | 0.835483 | 1.634776e-56 | -8.615850e-47 |
Msa0059880 | Msa0072940 | 0.837351 | 5.472509e-57 | -8.615850e-47 |
Msa0064990 | Msa0072940 | 0.827442 | 1.560648e-54 | -8.615850e-47 |
Msa0072940 | Msa0121050 | 0.850794 | 1.348961e-60 | -8.615850e-47 |
Msa0072940 | Msa0129290 | 0.804824 | 1.794292e-49 | -8.615850e-47 |
Msa0072940 | Msa0129850 | 0.804515 | 2.081830e-49 | -8.615850e-47 |
Msa0072940 | Msa0134570 | 0.804934 | 1.702377e-49 | -8.615850e-47 |
Msa0072940 | Msa0140270 | 0.803694 | 3.084979e-49 | -8.615850e-47 |
Msa0072940 | Msa0150910 | 0.828666 | 7.920927e-55 | -8.615850e-47 |
Msa0072940 | Msa0155850 | 0.875339 | 3.330901e-68 | -8.615850e-47 |
Msa0072940 | Msa0179450 | 0.804235 | 2.381444e-49 | -8.615850e-47 |
Msa0072940 | Msa0190670 | 0.806352 | 8.578377e-50 | -8.615850e-47 |
Msa0072940 | Msa0200090 | 0.804916 | 1.716768e-49 | -8.615850e-47 |
Msa0072940 | Msa0207640 | 0.820508 | 6.609855e-53 | -8.615850e-47 |
Msa0072940 | Msa0212550 | 0.812744 | 3.633488e-51 | -8.615850e-47 |
Msa0072940 | Msa0242720 | 0.801199 | 1.007851e-48 | -8.615850e-47 |
Msa0072940 | Msa0274250 | 0.807427 | 5.081654e-50 | -8.615850e-47 |
Msa0072940 | Msa0274260 | 0.802422 | 5.652982e-49 | -8.615850e-47 |
Msa0072940 | Msa0278460 | 0.806149 | 9.462932e-50 | -8.615850e-47 |
Msa0072940 | Msa0287720 | 0.827954 | 1.176147e-54 | -8.615850e-47 |
Msa0072940 | Msa0319830 | 0.803719 | 3.048691e-49 | -8.615850e-47 |
Msa0072940 | Msa0328090 | 0.813615 | 2.339709e-51 | -8.615850e-47 |
Msa0072940 | Msa0343720 | 0.811308 | 7.470960e-51 | -8.615850e-47 |
Msa0072940 | Msa0349910 | 0.817809 | 2.720094e-52 | -8.615850e-47 |
Msa0072940 | Msa0398770 | 0.806185 | 9.300645e-50 | -8.615850e-47 |
Msa0072940 | Msa0418160 | 0.804678 | 1.924995e-49 | -8.615850e-47 |
Msa0072940 | Msa0420890 | 0.818280 | 2.128538e-52 | -8.615850e-47 |
Msa0072940 | Msa0430320 | 0.817746 | 2.810034e-52 | -8.615850e-47 |
Msa0072940 | Msa0430460 | 0.802432 | 5.627059e-49 | -8.615850e-47 |
Msa0072940 | Msa0438520 | 0.804590 | 2.008153e-49 | -8.615850e-47 |
Msa0072940 | Msa0464310 | 0.818849 | 1.581034e-52 | -8.615850e-47 |
Msa0072940 | Msa0491770 | 0.809089 | 2.247628e-50 | -8.615850e-47 |
Msa0072940 | Msa0535570 | 0.803249 | 3.815576e-49 | -8.615850e-47 |
Msa0072940 | Msa0538450 | 0.816869 | 4.427650e-52 | -8.615850e-47 |
Msa0072940 | Msa0538520 | 0.809137 | 2.195792e-50 | -8.615850e-47 |
Msa0072940 | Msa0546750 | 0.801085 | 1.063218e-48 | -8.615850e-47 |
Msa0072940 | Msa0546760 | 0.805548 | 1.265837e-49 | -8.615850e-47 |
Msa0072940 | Msa0594320 | 0.810416 | 1.165161e-50 | -8.615850e-47 |
Msa0072940 | Msa0639410 | 0.823615 | 1.259061e-53 | -8.615850e-47 |
Msa0072940 | Msa0646210 | 0.812739 | 3.642776e-51 | -8.615850e-47 |
Msa0072940 | Msa0651820 | 0.802557 | 5.302480e-49 | -8.615850e-47 |
Msa0072940 | Msa0668220 | 0.813405 | 2.602265e-51 | -8.615850e-47 |
Msa0072940 | Msa0670360 | 0.825041 | 5.819178e-54 | -8.615850e-47 |
Msa0072940 | Msa0671490 | 0.803838 | 2.879766e-49 | -8.615850e-47 |
Msa0072940 | Msa0671640 | 0.812807 | 3.520541e-51 | -8.615850e-47 |
Msa0072940 | Msa0682410 | 0.801070 | 1.070979e-48 | -8.615850e-47 |
Msa0072940 | Msa0711230 | 0.823921 | 1.067621e-53 | -8.615850e-47 |
Msa0072940 | Msa0711240 | 0.820953 | 5.223875e-53 | -8.615850e-47 |
Msa0072940 | Msa0716620 | 0.801417 | 9.092278e-49 | -8.615850e-47 |
Msa0072940 | Msa0720870 | 0.811342 | 7.346726e-51 | -8.615850e-47 |
Msa0072940 | Msa0727480 | 0.811407 | 7.108633e-51 | -8.615850e-47 |
Msa0072940 | Msa0750790 | 0.806442 | 8.210775e-50 | -8.615850e-47 |
Msa0072940 | Msa0751960 | 0.804425 | 2.173683e-49 | -8.615850e-47 |
Msa0072940 | Msa0751970 | 0.835630 | 1.500126e-56 | -8.615850e-47 |
Msa0072940 | Msa0761420 | 0.808133 | 3.597820e-50 | -8.615850e-47 |
Msa0072940 | Msa0768670 | 0.817293 | 3.554524e-52 | -8.615850e-47 |
Msa0072940 | Msa0768720 | 0.821164 | 4.669379e-53 | -8.615850e-47 |
Msa0072940 | Msa0772350 | 0.801944 | 7.089511e-49 | -8.615850e-47 |
Msa0072940 | Msa0782890 | 0.811198 | 7.893768e-51 | -8.615850e-47 |
Msa0072940 | Msa0787860 | 0.815437 | 9.250937e-52 | -8.615850e-47 |
Msa0072940 | Msa0789410 | 0.804486 | 2.111041e-49 | -8.615850e-47 |
Msa0072940 | Msa0792330 | 0.823382 | 1.427789e-53 | -8.615850e-47 |
Msa0072940 | Msa0794240 | 0.805775 | 1.134063e-49 | -8.615850e-47 |
Msa0072940 | Msa0814160 | 0.810104 | 1.360482e-50 | -8.615850e-47 |
Msa0072940 | Msa0822410 | 0.801445 | 8.974153e-49 | -8.615850e-47 |
Msa0072940 | Msa0824860 | 0.800730 | 1.256384e-48 | -8.615850e-47 |
Msa0072940 | Msa0826360 | 0.807646 | 4.565897e-50 | -8.615850e-47 |
Msa0072940 | Msa0854840 | 0.818758 | 1.658094e-52 | -8.615850e-47 |
Msa0072940 | Msa0863840 | 0.823680 | 1.215542e-53 | -8.615850e-47 |
Msa0072940 | Msa0863850 | 0.817562 | 3.091831e-52 | -8.615850e-47 |
Msa0072940 | Msa0863860 | 0.805170 | 1.519087e-49 | -8.615850e-47 |
Msa0072940 | Msa0864160 | 0.801081 | 1.065363e-48 | -8.615850e-47 |
Msa0072940 | Msa0867080 | 0.820789 | 5.698060e-53 | -8.615850e-47 |
Msa0072940 | Msa0868820 | 0.819445 | 1.156998e-52 | -8.615850e-47 |
Msa0072940 | Msa0869660 | 0.809252 | 2.074718e-50 | -8.615850e-47 |
Msa0072940 | Msa0883640 | 0.804482 | 2.114587e-49 | -8.615850e-47 |
Msa0072940 | Msa0902340 | 0.834982 | 2.186890e-56 | -8.615850e-47 |
Msa0072940 | Msa0910830 | 0.821454 | 4.002525e-53 | -8.615850e-47 |
Msa0072940 | Msa0932890 | 0.811230 | 7.766100e-51 | -8.615850e-47 |
Msa0072940 | Msa0932930 | 0.812618 | 3.871848e-51 | -8.615850e-47 |
Msa0072940 | Msa0933590 | 0.824643 | 7.221138e-54 | -8.615850e-47 |
Msa0072940 | Msa0940780 | 0.802053 | 6.734458e-49 | -8.615850e-47 |
Msa0072940 | Msa0960090 | 0.805978 | 1.028151e-49 | -8.615850e-47 |
Msa0072940 | Msa0972370 | 0.805534 | 1.274261e-49 | -8.615850e-47 |
Msa0072940 | Msa0976400 | 0.820793 | 5.686112e-53 | -8.615850e-47 |
Msa0072940 | Msa0982900 | 0.808835 | 2.547149e-50 | -8.615850e-47 |
Msa0072940 | Msa0985700 | 0.806700 | 7.241143e-50 | -8.615850e-47 |
Msa0072940 | Msa1006170 | 0.826874 | 2.134726e-54 | -8.615850e-47 |
Msa0072940 | Msa1006220 | 0.825206 | 5.319767e-54 | -8.615850e-47 |
Msa0072940 | Msa1024350 | 0.815310 | 9.869082e-52 | -8.615850e-47 |
Msa0072940 | Msa1026050 | 0.817390 | 3.380381e-52 | -8.615850e-47 |
Msa0072940 | Msa1061670 | 0.800638 | 1.311870e-48 | -8.615850e-47 |
Msa0072940 | Msa1061840 | 0.811579 | 6.524416e-51 | -8.615850e-47 |
Msa0072940 | Msa1064940 | 0.819837 | 9.415790e-53 | -8.615850e-47 |
Msa0072940 | Msa1076830 | 0.809603 | 1.743847e-50 | -8.615850e-47 |
Msa0072940 | Msa1087370 | 0.804551 | 2.046176e-49 | -8.615850e-47 |
Msa0072940 | Msa1087380 | 0.825430 | 4.708714e-54 | -8.615850e-47 |
Msa0072940 | Msa1100030 | 0.804671 | 1.931788e-49 | -8.615850e-47 |
Msa0072940 | Msa1104960 | 0.805874 | 1.081402e-49 | -8.615850e-47 |
Msa0072940 | Msa1106680 | 0.813526 | 2.447883e-51 | -8.615850e-47 |
Msa0072940 | Msa1107510 | 0.807165 | 5.774845e-50 | -8.615850e-47 |
Msa0072940 | Msa1109880 | 0.829035 | 6.447059e-55 | -8.615850e-47 |
Msa0072940 | Msa1109890 | 0.834371 | 3.115433e-56 | -8.615850e-47 |
Msa0072940 | Msa1151070 | 0.801814 | 7.540143e-49 | -8.615850e-47 |
Msa0072940 | Msa1156240 | 0.811456 | 6.937451e-51 | -8.615850e-47 |
Msa0072940 | Msa1164440 | 0.815285 | 9.995631e-52 | -8.615850e-47 |
Msa0072940 | Msa1170340 | 0.820971 | 5.173605e-53 | -8.615850e-47 |
Msa0072940 | Msa1177090 | 0.803794 | 2.941413e-49 | -8.615850e-47 |
Msa0072940 | Msa1214960 | 0.803289 | 3.743169e-49 | -8.615850e-47 |
Msa0072940 | Msa1319030 | 0.804489 | 2.107826e-49 | -8.615850e-47 |
Msa0072940 | Msa1323030 | 0.802228 | 6.198876e-49 | -8.615850e-47 |
Msa0072940 | Msa1355340 | 0.825279 | 5.111797e-54 | -8.615850e-47 |
Msa0072940 | Msa1373560 | 0.831724 | 1.419376e-55 | -8.615850e-47 |
Msa0072940 | Msa1376070 | 0.815474 | 9.076711e-52 | -8.615850e-47 |
Msa0072940 | Msa1377520 | 0.821325 | 4.287949e-53 | -8.615850e-47 |
Msa0072940 | Msa1419390 | 0.800687 | 1.282519e-48 | -8.615850e-47 |
Msa0072940 | Msa1421130 | 0.803496 | 3.391338e-49 | -8.615850e-47 |
Msa0072940 | Msa1455760 | 0.810254 | 1.262782e-50 | -8.615850e-47 |
Msa0072940 | Msa1456600 | 0.800871 | 1.175800e-48 | -8.615850e-47 |
Msa0072940 | Msa1459930 | 0.801266 | 9.765508e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0072940 | MtrunA17_Chr1g0179801 | 84.309 | 376 | 14 | 3 | 1 | 331 | 1 | 376 | 0.0 | 631 |
Msa0072940 | MtrunA17_Chr7g0265221 | 59.474 | 380 | 102 | 5 | 1 | 328 | 1 | 380 | 1.40e-159 | 451 |
Msa0072940 | MtrunA17_Chr7g0250511 | 34.473 | 351 | 175 | 6 | 23 | 328 | 11 | 351 | 1.15e-66 | 213 |
Msa0072940 | MtrunA17_Chr8g0345831 | 36.991 | 319 | 147 | 5 | 34 | 308 | 15 | 323 | 9.24e-58 | 190 |
Msa0072940 | MtrunA17_Chr3g0128001 | 31.965 | 341 | 177 | 7 | 28 | 324 | 4 | 333 | 1.66e-51 | 173 |
Msa0072940 | MtrunA17_Chr5g0426891 | 30.086 | 349 | 180 | 8 | 26 | 324 | 4 | 338 | 4.71e-48 | 164 |
Msa0072940 | MtrunA17_Chr4g0050031 | 32.353 | 340 | 168 | 9 | 43 | 328 | 35 | 366 | 1.47e-44 | 156 |
Msa0072940 | MtrunA17_Chr4g0006371 | 29.363 | 361 | 187 | 8 | 26 | 325 | 14 | 367 | 2.67e-42 | 150 |
Msa0072940 | MtrunA17_Chr7g0242551 | 29.888 | 358 | 180 | 9 | 26 | 325 | 15 | 359 | 3.92e-42 | 149 |
Msa0072940 | MtrunA17_Chr8g0375671 | 29.363 | 361 | 190 | 9 | 19 | 328 | 11 | 357 | 2.56e-41 | 147 |
Msa0072940 | MtrunA17_Chr7g0239111 | 29.830 | 352 | 183 | 10 | 26 | 328 | 20 | 356 | 5.26e-41 | 147 |
Msa0072940 | MtrunA17_Chr2g0314381 | 27.838 | 370 | 200 | 10 | 13 | 328 | 24 | 380 | 2.60e-40 | 145 |
Msa0072940 | MtrunA17_Chr8g0375601 | 27.195 | 353 | 200 | 7 | 26 | 330 | 11 | 354 | 2.07e-39 | 142 |
Msa0072940 | MtrunA17_Chr2g0314391 | 27.027 | 370 | 208 | 8 | 7 | 328 | 18 | 373 | 3.81e-39 | 142 |
Msa0072940 | MtrunA17_Chr8g0375681 | 30.070 | 286 | 159 | 6 | 75 | 328 | 9 | 285 | 4.69e-39 | 140 |
Msa0072940 | MtrunA17_Chr3g0126741 | 31.338 | 284 | 133 | 7 | 65 | 297 | 59 | 331 | 5.71e-39 | 141 |
Msa0072940 | MtrunA17_Chr5g0420981 | 26.857 | 350 | 199 | 7 | 25 | 328 | 17 | 355 | 7.36e-39 | 141 |
Msa0072940 | MtrunA17_Chr5g0421091 | 26.934 | 349 | 197 | 7 | 26 | 328 | 11 | 347 | 8.35e-39 | 140 |
Msa0072940 | MtrunA17_Chr8g0365241 | 26.496 | 351 | 196 | 7 | 26 | 328 | 23 | 359 | 4.79e-38 | 139 |
Msa0072940 | MtrunA17_Chr1g0184151 | 28.955 | 335 | 176 | 7 | 26 | 311 | 1 | 322 | 1.87e-37 | 137 |
Msa0072940 | MtrunA17_Chr5g0420941 | 26.934 | 349 | 196 | 9 | 26 | 328 | 11 | 346 | 2.16e-37 | 137 |
Msa0072940 | MtrunA17_Chr5g0420901 | 26.923 | 364 | 199 | 8 | 15 | 328 | 1 | 347 | 4.37e-37 | 136 |
Msa0072940 | MtrunA17_Chr7g0239101 | 27.195 | 353 | 195 | 9 | 26 | 330 | 20 | 358 | 4.63e-37 | 136 |
Msa0072940 | MtrunA17_Chr3g0113641 | 29.213 | 356 | 184 | 9 | 26 | 327 | 15 | 356 | 6.25e-37 | 135 |
Msa0072940 | MtrunA17_Chr7g0239821 | 28.931 | 318 | 168 | 8 | 64 | 333 | 63 | 370 | 1.99e-36 | 134 |
Msa0072940 | MtrunA17_Chr1g0184121 | 29.688 | 320 | 167 | 7 | 37 | 310 | 14 | 321 | 6.49e-36 | 132 |
Msa0072940 | MtrunA17_Chr5g0423221 | 29.787 | 282 | 156 | 6 | 80 | 328 | 101 | 373 | 6.67e-36 | 133 |
Msa0072940 | MtrunA17_Chr2g0314401 | 26.503 | 366 | 209 | 8 | 10 | 328 | 2 | 354 | 7.35e-36 | 133 |
Msa0072940 | MtrunA17_Chr7g0220011 | 28.739 | 341 | 185 | 9 | 29 | 323 | 5 | 333 | 3.10e-35 | 130 |
Msa0072940 | MtrunA17_Chr5g0423191 | 27.874 | 348 | 175 | 11 | 37 | 335 | 24 | 344 | 3.37e-35 | 131 |
Msa0072940 | MtrunA17_Chr7g0239121 | 29.167 | 336 | 173 | 11 | 26 | 311 | 16 | 336 | 3.90e-35 | 131 |
Msa0072940 | MtrunA17_Chr5g0398291 | 28.274 | 336 | 188 | 8 | 26 | 311 | 8 | 340 | 3.54e-34 | 128 |
Msa0072940 | MtrunA17_Chr8g0375571 | 26.816 | 358 | 191 | 10 | 26 | 329 | 11 | 351 | 4.02e-34 | 128 |
Msa0072940 | MtrunA17_Chr1g0184161 | 28.660 | 321 | 170 | 7 | 37 | 311 | 15 | 322 | 5.37e-34 | 127 |
Msa0072940 | MtrunA17_Chr1g0184111 | 28.750 | 320 | 170 | 7 | 37 | 310 | 14 | 321 | 9.75e-34 | 127 |
Msa0072940 | MtrunA17_Chr5g0420951 | 26.346 | 353 | 195 | 10 | 26 | 328 | 18 | 355 | 9.77e-34 | 127 |
Msa0072940 | MtrunA17_Chr2g0296371 | 25.410 | 366 | 206 | 7 | 15 | 328 | 6 | 356 | 1.06e-33 | 127 |
Msa0072940 | MtrunA17_Chr1g0184101 | 27.190 | 331 | 183 | 7 | 26 | 309 | 1 | 320 | 2.14e-33 | 126 |
Msa0072940 | MtrunA17_Chr5g0423201 | 28.873 | 284 | 156 | 5 | 80 | 328 | 77 | 349 | 2.94e-33 | 126 |
Msa0072940 | MtrunA17_Chr2g0311631 | 26.741 | 359 | 196 | 8 | 24 | 330 | 20 | 363 | 4.07e-33 | 125 |
Msa0072940 | MtrunA17_Chr5g0437181 | 28.291 | 357 | 186 | 9 | 26 | 327 | 14 | 355 | 4.83e-33 | 125 |
Msa0072940 | MtrunA17_Chr7g0239071 | 29.893 | 281 | 156 | 6 | 80 | 328 | 30 | 301 | 5.41e-33 | 124 |
Msa0072940 | MtrunA17_Chr5g0423211 | 25.071 | 351 | 202 | 8 | 26 | 328 | 13 | 350 | 5.48e-33 | 125 |
Msa0072940 | MtrunA17_Chr5g0412651 | 29.305 | 331 | 171 | 8 | 41 | 320 | 19 | 337 | 5.78e-33 | 125 |
Msa0072940 | MtrunA17_Chr8g0336851 | 26.761 | 355 | 192 | 9 | 25 | 328 | 27 | 364 | 1.02e-32 | 124 |
Msa0072940 | MtrunA17_Chr2g0311711 | 28.800 | 375 | 186 | 11 | 5 | 315 | 1 | 358 | 1.41e-32 | 124 |
Msa0072940 | MtrunA17_Chr2g0311831 | 29.805 | 359 | 178 | 14 | 25 | 328 | 32 | 371 | 2.21e-32 | 124 |
Msa0072940 | MtrunA17_Chr8g0370711 | 27.586 | 290 | 155 | 6 | 59 | 300 | 46 | 328 | 3.20e-32 | 123 |
Msa0072940 | MtrunA17_Chr5g0412671 | 30.605 | 281 | 157 | 5 | 80 | 328 | 71 | 345 | 3.65e-32 | 122 |
Msa0072940 | MtrunA17_Chr5g0423251 | 24.929 | 353 | 200 | 9 | 25 | 328 | 12 | 348 | 3.69e-32 | 123 |
Msa0072940 | MtrunA17_Chr5g0421011 | 25.281 | 356 | 205 | 7 | 20 | 328 | 7 | 348 | 5.15e-32 | 122 |
Msa0072940 | MtrunA17_Chr3g0109041 | 26.912 | 353 | 202 | 9 | 26 | 330 | 10 | 354 | 6.56e-32 | 122 |
Msa0072940 | MtrunA17_Chr8g0370721 | 28.746 | 327 | 170 | 8 | 25 | 300 | 14 | 328 | 9.79e-32 | 122 |
Msa0072940 | MtrunA17_Chr7g0232161 | 27.532 | 316 | 163 | 10 | 26 | 292 | 25 | 323 | 1.13e-31 | 121 |
Msa0072940 | MtrunA17_Chr5g0412681 | 29.293 | 297 | 162 | 6 | 65 | 319 | 33 | 323 | 1.72e-31 | 120 |
Msa0072940 | MtrunA17_Chr5g0421101 | 25.723 | 346 | 196 | 8 | 26 | 324 | 13 | 344 | 2.62e-31 | 120 |
Msa0072940 | MtrunA17_Chr8g0371931 | 31.818 | 242 | 121 | 7 | 80 | 287 | 72 | 303 | 5.77e-31 | 120 |
Msa0072940 | MtrunA17_Chr3g0093751 | 26.099 | 364 | 202 | 8 | 15 | 328 | 8 | 354 | 1.04e-30 | 119 |
Msa0072940 | MtrunA17_Chr8g0375701 | 28.205 | 351 | 192 | 10 | 25 | 328 | 18 | 355 | 1.26e-30 | 119 |
Msa0072940 | MtrunA17_Chr6g0472861 | 28.235 | 340 | 181 | 11 | 25 | 311 | 27 | 356 | 1.76e-30 | 119 |
Msa0072940 | MtrunA17_Chr8g0348081 | 27.247 | 356 | 189 | 9 | 25 | 328 | 27 | 364 | 2.25e-30 | 118 |
Msa0072940 | MtrunA17_Chr3g0093741 | 26.099 | 364 | 202 | 8 | 15 | 328 | 8 | 354 | 4.67e-30 | 117 |
Msa0072940 | MtrunA17_Chr5g0421041 | 25.833 | 360 | 189 | 10 | 25 | 335 | 12 | 342 | 7.00e-30 | 117 |
Msa0072940 | MtrunA17_Chr5g0424201 | 27.692 | 325 | 166 | 11 | 37 | 309 | 20 | 327 | 7.22e-30 | 116 |
Msa0072940 | MtrunA17_Chr6g0455481 | 27.437 | 277 | 163 | 4 | 80 | 325 | 70 | 339 | 7.85e-30 | 116 |
Msa0072940 | MtrunA17_Chr8g0336761 | 26.124 | 356 | 193 | 9 | 25 | 328 | 27 | 364 | 1.11e-29 | 116 |
Msa0072940 | MtrunA17_Chr3g0093761 | 26.146 | 371 | 206 | 9 | 8 | 328 | 1 | 353 | 1.18e-29 | 116 |
Msa0072940 | MtrunA17_Chr7g0225881 | 27.164 | 335 | 186 | 9 | 25 | 310 | 27 | 352 | 1.49e-29 | 116 |
Msa0072940 | MtrunA17_Chr3g0145171 | 26.316 | 304 | 163 | 7 | 59 | 308 | 46 | 342 | 1.74e-29 | 115 |
Msa0072940 | MtrunA17_Chr5g0405411 | 30.705 | 241 | 125 | 6 | 80 | 287 | 72 | 303 | 1.88e-29 | 115 |
Msa0072940 | MtrunA17_Chr2g0311761 | 27.887 | 355 | 191 | 11 | 25 | 328 | 32 | 372 | 1.92e-29 | 116 |
Msa0072940 | MtrunA17_Chr3g0125201 | 29.577 | 284 | 137 | 6 | 63 | 296 | 1 | 271 | 2.70e-29 | 114 |
Msa0072940 | MtrunA17_Chr1g0162191 | 26.100 | 341 | 186 | 10 | 34 | 323 | 20 | 345 | 3.15e-29 | 115 |
Msa0072940 | MtrunA17_Chr1g0187831 | 27.434 | 339 | 184 | 9 | 25 | 311 | 29 | 357 | 4.19e-29 | 115 |
Msa0072940 | MtrunA17_Chr8g0336861 | 26.549 | 339 | 180 | 10 | 25 | 311 | 27 | 348 | 6.42e-29 | 114 |
Msa0072940 | MtrunA17_Chr3g0102041 | 31.276 | 243 | 121 | 7 | 80 | 287 | 72 | 303 | 8.06e-29 | 114 |
Msa0072940 | MtrunA17_Chr7g0220001 | 26.923 | 260 | 153 | 4 | 80 | 309 | 69 | 321 | 1.75e-28 | 112 |
Msa0072940 | MtrunA17_Chr8g0371921 | 30.417 | 240 | 127 | 6 | 80 | 287 | 72 | 303 | 1.95e-28 | 113 |
Msa0072940 | MtrunA17_Chr1g0170631 | 33.673 | 196 | 94 | 4 | 163 | 328 | 3 | 192 | 2.23e-28 | 108 |
Msa0072940 | MtrunA17_Chr8g0354261 | 28.739 | 341 | 176 | 9 | 25 | 312 | 32 | 358 | 2.53e-28 | 113 |
Msa0072940 | MtrunA17_Chr2g0311681 | 27.405 | 343 | 178 | 8 | 25 | 311 | 26 | 353 | 2.83e-28 | 112 |
Msa0072940 | MtrunA17_Chr7g0247991 | 27.933 | 358 | 188 | 10 | 25 | 328 | 32 | 373 | 7.50e-28 | 111 |
Msa0072940 | MtrunA17_Chr1g0187821 | 28.011 | 357 | 192 | 10 | 24 | 328 | 27 | 370 | 8.87e-28 | 111 |
Msa0072940 | MtrunA17_Chr8g0336631 | 26.331 | 357 | 192 | 11 | 25 | 328 | 27 | 365 | 1.01e-27 | 111 |
Msa0072940 | MtrunA17_Chr8g0354241 | 26.667 | 360 | 197 | 9 | 25 | 331 | 32 | 377 | 1.07e-27 | 111 |
Msa0072940 | MtrunA17_Chr2g0311701 | 26.979 | 341 | 182 | 9 | 25 | 311 | 32 | 359 | 1.93e-27 | 110 |
Msa0072940 | MtrunA17_Chr2g0311691 | 27.114 | 343 | 179 | 8 | 25 | 311 | 26 | 353 | 3.70e-27 | 109 |
Msa0072940 | MtrunA17_Chr7g0266651 | 25.352 | 355 | 199 | 10 | 25 | 328 | 23 | 362 | 6.80e-27 | 108 |
Msa0072940 | MtrunA17_Chr5g0424211 | 26.861 | 309 | 167 | 8 | 37 | 297 | 18 | 315 | 8.58e-27 | 108 |
Msa0072940 | MtrunA17_Chr8g0336781 | 24.789 | 355 | 200 | 8 | 25 | 328 | 62 | 400 | 1.76e-26 | 108 |
Msa0072940 | MtrunA17_Chr3g0114861 | 27.439 | 328 | 181 | 10 | 26 | 308 | 6 | 321 | 2.59e-26 | 106 |
Msa0072940 | MtrunA17_Chr1g0187811 | 26.593 | 361 | 197 | 10 | 25 | 328 | 144 | 493 | 3.00e-26 | 108 |
Msa0072940 | MtrunA17_Chr8g0335411 | 27.348 | 362 | 185 | 12 | 25 | 328 | 32 | 373 | 3.10e-26 | 107 |
Msa0072940 | MtrunA17_Chr2g0311921 | 27.114 | 343 | 181 | 11 | 25 | 314 | 18 | 344 | 4.66e-26 | 106 |
Msa0072940 | MtrunA17_Chr3g0087031 | 26.523 | 279 | 165 | 6 | 80 | 328 | 92 | 360 | 5.35e-26 | 106 |
Msa0072940 | MtrunA17_Chr2g0311741 | 28.387 | 310 | 164 | 7 | 47 | 308 | 9 | 308 | 1.38e-25 | 104 |
Msa0072940 | MtrunA17_Chr1g0158011 | 28.571 | 273 | 151 | 7 | 88 | 329 | 3 | 262 | 1.45e-25 | 103 |
Msa0072940 | MtrunA17_Chr7g0239091 | 27.476 | 313 | 159 | 10 | 64 | 328 | 159 | 451 | 2.39e-25 | 105 |
Msa0072940 | MtrunA17_Chr1g0204181 | 27.273 | 330 | 167 | 9 | 37 | 309 | 38 | 351 | 3.11e-25 | 104 |
Msa0072940 | MtrunA17_Chr2g0332191 | 28.247 | 308 | 173 | 7 | 65 | 333 | 52 | 350 | 3.85e-25 | 104 |
Msa0072940 | MtrunA17_Chr2g0311861 | 28.529 | 340 | 187 | 11 | 25 | 328 | 28 | 347 | 8.38e-25 | 102 |
Msa0072940 | MtrunA17_Chr4g0066121 | 28.529 | 333 | 163 | 13 | 26 | 303 | 28 | 340 | 1.02e-24 | 102 |
Msa0072940 | MtrunA17_Chr1g0161041 | 27.089 | 347 | 188 | 9 | 25 | 322 | 59 | 389 | 1.32e-24 | 103 |
Msa0072940 | MtrunA17_Chr1g0184241 | 25.074 | 339 | 181 | 7 | 24 | 310 | 32 | 349 | 1.68e-24 | 102 |
Msa0072940 | MtrunA17_Chr4g0045411 | 27.985 | 268 | 144 | 7 | 80 | 308 | 68 | 325 | 2.12e-24 | 101 |
Msa0072940 | MtrunA17_Chr8g0336751 | 26.113 | 337 | 185 | 9 | 24 | 310 | 57 | 379 | 3.88e-24 | 101 |
Msa0072940 | MtrunA17_Chr1g0191201 | 25.970 | 335 | 177 | 10 | 59 | 330 | 47 | 373 | 4.61e-24 | 101 |
Msa0072940 | MtrunA17_Chr4g0064781 | 26.692 | 266 | 151 | 6 | 80 | 308 | 78 | 336 | 5.02e-24 | 100 |
Msa0072940 | MtrunA17_Chr8g0364471 | 26.471 | 340 | 182 | 9 | 25 | 311 | 32 | 356 | 1.15e-23 | 100 |
Msa0072940 | MtrunA17_Chr3g0145181 | 24.716 | 352 | 195 | 11 | 18 | 313 | 5 | 342 | 3.36e-23 | 98.6 |
Msa0072940 | MtrunA17_Chr7g0235951 | 25.978 | 358 | 195 | 10 | 25 | 328 | 32 | 373 | 3.54e-23 | 98.6 |
Msa0072940 | MtrunA17_Chr1g0167911 | 26.163 | 344 | 194 | 9 | 25 | 321 | 19 | 349 | 5.24e-23 | 98.2 |
Msa0072940 | MtrunA17_Chr1g0161081 | 26.667 | 345 | 194 | 10 | 24 | 322 | 35 | 366 | 8.48e-23 | 97.8 |
Msa0072940 | MtrunA17_Chr6g0474391 | 26.220 | 328 | 173 | 8 | 37 | 309 | 43 | 356 | 9.63e-23 | 97.8 |
Msa0072940 | MtrunA17_Chr1g0162351 | 26.897 | 290 | 152 | 8 | 80 | 324 | 108 | 382 | 2.21e-22 | 96.7 |
Msa0072940 | MtrunA17_Chr1g0161111 | 25.797 | 345 | 193 | 9 | 24 | 320 | 94 | 423 | 2.55e-22 | 97.1 |
Msa0072940 | MtrunA17_Chr4g0045471 | 26.316 | 285 | 158 | 8 | 80 | 320 | 63 | 339 | 3.74e-22 | 95.5 |
Msa0072940 | MtrunA17_Chr1g0167961 | 27.035 | 344 | 176 | 13 | 25 | 313 | 34 | 357 | 4.77e-22 | 95.5 |
Msa0072940 | MtrunA17_Chr4g0045441 | 26.510 | 298 | 160 | 9 | 80 | 333 | 63 | 345 | 6.16e-22 | 95.1 |
Msa0072940 | MtrunA17_Chr1g0167951 | 26.377 | 345 | 186 | 12 | 9 | 303 | 4 | 330 | 6.40e-22 | 95.1 |
Msa0072940 | MtrunA17_Chr4g0055591 | 24.929 | 353 | 201 | 10 | 25 | 328 | 24 | 361 | 6.52e-22 | 95.1 |
Msa0072940 | MtrunA17_Chr5g0420721 | 27.170 | 265 | 137 | 8 | 105 | 335 | 4 | 246 | 6.61e-22 | 93.2 |
Msa0072940 | MtrunA17_Chr4g0045451 | 26.087 | 276 | 151 | 8 | 80 | 311 | 63 | 329 | 1.97e-21 | 93.6 |
Msa0072940 | MtrunA17_Chr3g0130391 | 25.000 | 356 | 191 | 11 | 29 | 324 | 38 | 377 | 2.82e-21 | 93.6 |
Msa0072940 | MtrunA17_Chr1g0162361 | 28.667 | 300 | 160 | 11 | 80 | 335 | 55 | 344 | 4.74e-21 | 92.4 |
Msa0072940 | MtrunA17_Chr1g0162321 | 26.298 | 289 | 155 | 8 | 80 | 324 | 108 | 382 | 6.93e-21 | 92.4 |
Msa0072940 | MtrunA17_Chr8g0362741 | 27.626 | 257 | 139 | 8 | 25 | 249 | 32 | 273 | 1.41e-20 | 90.1 |
Msa0072940 | MtrunA17_Chr1g0170641 | 33.793 | 145 | 71 | 2 | 37 | 163 | 24 | 161 | 1.93e-20 | 86.7 |
Msa0072940 | MtrunA17_Chr7g0236011 | 25.140 | 358 | 198 | 10 | 25 | 328 | 32 | 373 | 2.24e-20 | 90.9 |
Msa0072940 | MtrunA17_Chr7g0235981 | 26.398 | 322 | 173 | 9 | 25 | 311 | 18 | 310 | 3.50e-20 | 89.7 |
Msa0072940 | MtrunA17_Chr3g0126761 | 30.061 | 163 | 82 | 2 | 163 | 297 | 44 | 202 | 4.57e-20 | 87.8 |
Msa0072940 | MtrunA17_Chr4g0045431 | 26.148 | 283 | 162 | 5 | 80 | 321 | 63 | 339 | 8.61e-20 | 89.0 |
Msa0072940 | MtrunA17_Chr5g0420881 | 30.769 | 143 | 70 | 1 | 215 | 328 | 2 | 144 | 9.62e-20 | 84.3 |
Msa0072940 | MtrunA17_Chr4g0053251 | 27.083 | 240 | 142 | 7 | 81 | 287 | 50 | 289 | 1.83e-19 | 87.4 |
Msa0072940 | MtrunA17_Chr3g0121141 | 27.119 | 295 | 149 | 9 | 65 | 309 | 4 | 282 | 4.88e-19 | 86.3 |
Msa0072940 | MtrunA17_Chr4g0011311 | 24.746 | 295 | 159 | 8 | 25 | 273 | 32 | 309 | 9.86e-19 | 85.1 |
Msa0072940 | MtrunA17_Chr3g0125421 | 25.455 | 330 | 172 | 11 | 37 | 309 | 16 | 328 | 2.42e-18 | 84.7 |
Msa0072940 | MtrunA17_Chr8g0384461 | 25.000 | 264 | 157 | 5 | 80 | 309 | 81 | 337 | 2.63e-18 | 84.7 |
Msa0072940 | MtrunA17_Chr2g0289341 | 26.400 | 250 | 129 | 7 | 80 | 292 | 35 | 266 | 2.85e-18 | 84.0 |
Msa0072940 | MtrunA17_Chr8g0351101 | 24.316 | 329 | 177 | 8 | 37 | 309 | 33 | 345 | 4.20e-18 | 84.3 |
Msa0072940 | MtrunA17_Chr4g0066991 | 25.905 | 359 | 174 | 12 | 25 | 328 | 32 | 353 | 9.54e-18 | 83.2 |
Msa0072940 | MtrunA17_Chr5g0439011 | 25.882 | 255 | 140 | 6 | 80 | 300 | 36 | 275 | 3.93e-17 | 80.9 |
Msa0072940 | MtrunA17_Chr8g0384481 | 23.653 | 334 | 189 | 7 | 37 | 319 | 38 | 356 | 7.04e-17 | 80.9 |
Msa0072940 | MtrunA17_Chr3g0114871 | 24.549 | 277 | 141 | 9 | 37 | 264 | 18 | 275 | 7.54e-16 | 76.6 |
Msa0072940 | MtrunA17_Chr1g0158031 | 29.775 | 178 | 93 | 5 | 180 | 329 | 8 | 181 | 8.26e-16 | 74.7 |
Msa0072940 | MtrunA17_Chr3g0092531 | 27.686 | 242 | 132 | 7 | 80 | 291 | 41 | 269 | 1.25e-15 | 76.6 |
Msa0072940 | MtrunA17_Chr4g0075471 | 41.667 | 72 | 42 | 0 | 221 | 292 | 65 | 136 | 2.76e-15 | 72.4 |
Msa0072940 | MtrunA17_Chr8g0358941 | 24.514 | 257 | 139 | 8 | 80 | 292 | 52 | 297 | 1.04e-14 | 73.9 |
Msa0072940 | MtrunA17_Chr8g0336801 | 32.432 | 111 | 72 | 1 | 221 | 328 | 46 | 156 | 1.89e-14 | 70.1 |
Msa0072940 | MtrunA17_Chr1g0167931 | 24.702 | 336 | 175 | 13 | 25 | 323 | 19 | 313 | 2.31e-14 | 72.8 |
Msa0072940 | MtrunA17_Chr2g0311641 | 30.464 | 151 | 82 | 3 | 24 | 157 | 20 | 164 | 8.46e-14 | 68.6 |
Msa0072940 | MtrunA17_Chr1g0184141 | 29.921 | 127 | 81 | 3 | 95 | 220 | 8 | 127 | 1.11e-13 | 67.0 |
Msa0072940 | MtrunA17_Chr1g0158021 | 27.322 | 183 | 100 | 5 | 57 | 219 | 41 | 210 | 1.15e-12 | 67.0 |
Msa0072940 | MtrunA17_Chr8g0336831 | 27.397 | 219 | 119 | 9 | 24 | 220 | 26 | 226 | 2.13e-11 | 63.2 |
Msa0072940 | MtrunA17_Chr6g0488511 | 37.500 | 88 | 51 | 2 | 219 | 305 | 193 | 277 | 7.05e-11 | 62.4 |
Msa0072940 | MtrunA17_Chr8g0375641 | 27.108 | 166 | 93 | 5 | 19 | 163 | 11 | 169 | 8.08e-11 | 60.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0072940 | AT2G36690.2 | 53.371 | 356 | 116 | 4 | 21 | 331 | 16 | 366 | 1.30e-129 | 375 |
Msa0072940 | AT2G36690.1 | 53.371 | 356 | 116 | 4 | 21 | 331 | 16 | 366 | 1.30e-129 | 375 |
Msa0072940 | AT2G44800.1 | 35.735 | 347 | 169 | 5 | 29 | 330 | 19 | 356 | 2.21e-68 | 218 |
Msa0072940 | AT3G60290.1 | 34.366 | 355 | 179 | 5 | 18 | 327 | 8 | 353 | 2.77e-66 | 213 |
Msa0072940 | AT4G10500.1 | 35.855 | 304 | 141 | 4 | 37 | 296 | 20 | 313 | 1.28e-58 | 192 |
Msa0072940 | AT4G10490.1 | 34.069 | 317 | 151 | 5 | 22 | 294 | 7 | 309 | 1.13e-56 | 187 |
Msa0072940 | AT5G07480.1 | 30.460 | 348 | 175 | 8 | 34 | 328 | 21 | 354 | 7.26e-51 | 172 |
Msa0072940 | AT5G24530.1 | 31.293 | 294 | 145 | 5 | 28 | 276 | 4 | 285 | 2.73e-45 | 157 |
Msa0072940 | AT3G11180.1 | 29.395 | 347 | 191 | 6 | 26 | 325 | 56 | 395 | 1.95e-41 | 149 |
Msa0072940 | AT2G38240.1 | 28.889 | 360 | 181 | 10 | 26 | 329 | 12 | 352 | 1.05e-40 | 146 |
Msa0072940 | AT3G11180.2 | 28.857 | 350 | 191 | 7 | 26 | 324 | 56 | 398 | 2.02e-39 | 144 |
Msa0072940 | AT1G55290.1 | 30.838 | 334 | 172 | 8 | 24 | 311 | 24 | 344 | 7.12e-39 | 141 |
Msa0072940 | AT5G05600.1 | 30.286 | 350 | 184 | 8 | 26 | 325 | 27 | 366 | 5.11e-37 | 137 |
Msa0072940 | AT5G07480.2 | 30.677 | 251 | 133 | 5 | 113 | 328 | 1 | 245 | 2.15e-36 | 132 |
Msa0072940 | AT3G21420.1 | 27.577 | 359 | 197 | 8 | 23 | 328 | 14 | 362 | 6.17e-35 | 131 |
Msa0072940 | AT1G17010.1 | 26.420 | 352 | 200 | 9 | 26 | 328 | 17 | 358 | 4.11e-34 | 129 |
Msa0072940 | AT3G13610.1 | 27.761 | 335 | 180 | 8 | 24 | 311 | 25 | 344 | 2.27e-33 | 127 |
Msa0072940 | AT3G12900.1 | 27.410 | 332 | 181 | 8 | 24 | 309 | 20 | 337 | 2.39e-33 | 126 |
Msa0072940 | AT3G55970.1 | 26.062 | 353 | 204 | 7 | 26 | 327 | 14 | 360 | 8.33e-33 | 125 |
Msa0072940 | AT1G17020.1 | 26.882 | 279 | 169 | 5 | 80 | 328 | 85 | 358 | 3.95e-31 | 120 |
Msa0072940 | AT4G25420.1 | 28.173 | 323 | 172 | 7 | 37 | 309 | 40 | 352 | 1.93e-30 | 119 |
Msa0072940 | AT4G25310.1 | 28.114 | 281 | 159 | 7 | 80 | 328 | 84 | 353 | 3.17e-30 | 118 |
Msa0072940 | AT4G25300.1 | 27.599 | 279 | 166 | 5 | 80 | 328 | 84 | 356 | 1.68e-29 | 116 |
Msa0072940 | AT4G25310.2 | 29.762 | 252 | 164 | 6 | 80 | 328 | 84 | 325 | 2.65e-29 | 115 |
Msa0072940 | AT4G16330.2 | 28.788 | 264 | 145 | 7 | 80 | 310 | 93 | 346 | 1.43e-28 | 114 |
Msa0072940 | AT4G22880.1 | 25.519 | 337 | 197 | 8 | 26 | 311 | 7 | 340 | 3.88e-28 | 112 |
Msa0072940 | AT4G22880.2 | 25.519 | 337 | 197 | 8 | 26 | 311 | 7 | 340 | 3.88e-28 | 112 |
Msa0072940 | AT4G22880.3 | 25.519 | 337 | 197 | 8 | 26 | 311 | 7 | 340 | 3.88e-28 | 112 |
Msa0072940 | AT3G51240.1 | 30.165 | 242 | 125 | 7 | 80 | 287 | 71 | 302 | 5.26e-28 | 112 |
Msa0072940 | AT5G12270.1 | 29.333 | 375 | 198 | 12 | 5 | 328 | 1 | 359 | 1.50e-27 | 110 |
Msa0072940 | AT1G04350.1 | 28.011 | 357 | 189 | 13 | 24 | 328 | 20 | 360 | 4.94e-27 | 109 |
Msa0072940 | AT5G59530.1 | 28.698 | 338 | 171 | 13 | 25 | 308 | 23 | 344 | 1.14e-26 | 108 |
Msa0072940 | AT1G78550.2 | 26.182 | 275 | 166 | 5 | 80 | 324 | 7 | 274 | 1.90e-26 | 106 |
Msa0072940 | AT5G20550.1 | 26.074 | 326 | 179 | 9 | 26 | 300 | 9 | 323 | 4.01e-26 | 107 |
Msa0072940 | AT2G30840.1 | 27.566 | 341 | 178 | 11 | 25 | 311 | 20 | 345 | 4.42e-26 | 107 |
Msa0072940 | AT2G30830.1 | 28.358 | 335 | 173 | 10 | 20 | 303 | 15 | 333 | 4.57e-26 | 107 |
Msa0072940 | AT1G78550.1 | 24.478 | 335 | 195 | 7 | 37 | 324 | 29 | 352 | 5.59e-26 | 106 |
Msa0072940 | AT1G06620.1 | 27.327 | 333 | 182 | 9 | 24 | 308 | 25 | 345 | 6.60e-26 | 106 |
Msa0072940 | AT1G77330.1 | 26.014 | 296 | 160 | 6 | 63 | 309 | 1 | 286 | 8.31e-26 | 105 |
Msa0072940 | AT5G54000.2 | 27.273 | 253 | 144 | 5 | 80 | 300 | 79 | 323 | 1.51e-25 | 105 |
Msa0072940 | AT4G16330.1 | 28.926 | 242 | 130 | 6 | 101 | 310 | 9 | 240 | 1.51e-25 | 103 |
Msa0072940 | AT3G19010.1 | 27.933 | 358 | 175 | 13 | 41 | 333 | 8 | 347 | 1.53e-25 | 105 |
Msa0072940 | AT3G19010.4 | 27.933 | 358 | 175 | 13 | 41 | 333 | 8 | 347 | 1.53e-25 | 105 |
Msa0072940 | AT5G43450.1 | 26.590 | 346 | 196 | 9 | 25 | 323 | 23 | 357 | 4.32e-25 | 104 |
Msa0072940 | AT5G08640.2 | 27.414 | 321 | 170 | 8 | 37 | 308 | 19 | 325 | 5.19e-25 | 103 |
Msa0072940 | AT5G08640.1 | 27.414 | 321 | 170 | 8 | 37 | 308 | 19 | 325 | 5.19e-25 | 103 |
Msa0072940 | AT5G54000.1 | 26.693 | 251 | 144 | 5 | 82 | 300 | 1 | 243 | 1.17e-24 | 101 |
Msa0072940 | AT1G03400.1 | 25.656 | 343 | 198 | 9 | 25 | 322 | 19 | 349 | 1.70e-24 | 102 |
Msa0072940 | AT2G06960.1 | 35.802 | 162 | 67 | 3 | 180 | 318 | 1 | 148 | 2.29e-24 | 97.4 |
Msa0072940 | AT5G43440.1 | 26.994 | 326 | 181 | 9 | 25 | 302 | 23 | 339 | 2.81e-24 | 102 |
Msa0072940 | AT1G06650.2 | 27.035 | 344 | 179 | 12 | 24 | 309 | 24 | 353 | 1.43e-23 | 100 |
Msa0072940 | AT3G51240.2 | 29.825 | 228 | 116 | 7 | 94 | 287 | 1 | 218 | 1.86e-23 | 98.2 |
Msa0072940 | AT5G07200.1 | 24.118 | 340 | 186 | 8 | 28 | 309 | 28 | 353 | 2.35e-23 | 99.8 |
Msa0072940 | AT5G20400.1 | 26.693 | 251 | 148 | 4 | 80 | 300 | 78 | 322 | 3.14e-23 | 99.0 |
Msa0072940 | AT1G49390.1 | 24.771 | 327 | 181 | 9 | 26 | 300 | 9 | 322 | 5.69e-23 | 98.2 |
Msa0072940 | AT5G51810.1 | 26.006 | 323 | 175 | 8 | 37 | 309 | 42 | 350 | 9.40e-23 | 98.2 |
Msa0072940 | AT1G03410.2 | 27.300 | 337 | 181 | 11 | 24 | 308 | 18 | 342 | 1.30e-22 | 97.4 |
Msa0072940 | AT1G03410.1 | 27.300 | 337 | 181 | 11 | 24 | 308 | 55 | 379 | 1.54e-22 | 97.8 |
Msa0072940 | AT1G04380.1 | 28.435 | 313 | 161 | 11 | 37 | 302 | 23 | 319 | 1.55e-22 | 97.1 |
Msa0072940 | AT2G30840.3 | 27.273 | 341 | 173 | 12 | 25 | 311 | 20 | 339 | 1.59e-22 | 97.1 |
Msa0072940 | AT5G59540.1 | 27.273 | 341 | 173 | 13 | 25 | 308 | 24 | 346 | 2.53e-22 | 96.7 |
Msa0072940 | AT1G15550.1 | 25.271 | 277 | 176 | 4 | 80 | 327 | 82 | 356 | 5.12e-22 | 95.5 |
Msa0072940 | AT3G61400.1 | 24.802 | 379 | 216 | 11 | 1 | 323 | 1 | 366 | 5.40e-22 | 95.9 |
Msa0072940 | AT1G49390.2 | 26.087 | 253 | 143 | 6 | 82 | 300 | 1 | 243 | 6.76e-22 | 94.0 |
Msa0072940 | AT2G25450.1 | 25.970 | 335 | 181 | 9 | 25 | 307 | 20 | 339 | 8.29e-22 | 95.1 |
Msa0072940 | AT1G60980.1 | 25.000 | 332 | 172 | 9 | 37 | 309 | 36 | 349 | 2.28e-21 | 94.0 |
Msa0072940 | AT1G06645.1 | 25.360 | 347 | 183 | 11 | 24 | 313 | 37 | 364 | 2.83e-21 | 94.0 |
Msa0072940 | AT3G19010.3 | 26.970 | 330 | 184 | 11 | 41 | 333 | 8 | 317 | 7.10e-21 | 92.0 |
Msa0072940 | AT3G19000.1 | 23.460 | 341 | 190 | 7 | 41 | 319 | 8 | 339 | 3.59e-20 | 90.5 |
Msa0072940 | AT1G03400.2 | 23.720 | 371 | 198 | 10 | 25 | 322 | 19 | 377 | 3.99e-19 | 87.8 |
Msa0072940 | AT5G63590.1 | 29.167 | 264 | 143 | 7 | 80 | 305 | 42 | 299 | 4.45e-19 | 86.7 |
Msa0072940 | AT5G43935.1 | 29.339 | 242 | 154 | 6 | 80 | 309 | 47 | 283 | 8.07e-19 | 85.5 |
Msa0072940 | AT4G25300.2 | 27.551 | 196 | 108 | 3 | 162 | 328 | 72 | 262 | 1.63e-18 | 84.3 |
Msa0072940 | AT1G12010.1 | 25.704 | 284 | 148 | 8 | 60 | 294 | 2 | 271 | 2.87e-18 | 84.7 |
Msa0072940 | AT1G44090.1 | 24.662 | 296 | 160 | 7 | 59 | 299 | 57 | 344 | 1.74e-17 | 83.2 |
Msa0072940 | AT4G25420.2 | 26.255 | 259 | 131 | 7 | 37 | 245 | 40 | 288 | 8.04e-17 | 80.1 |
Msa0072940 | AT2G30840.2 | 27.372 | 274 | 135 | 9 | 25 | 248 | 20 | 279 | 2.41e-16 | 79.0 |
Msa0072940 | AT1G62380.1 | 23.509 | 285 | 153 | 7 | 60 | 294 | 2 | 271 | 2.95e-16 | 79.0 |
Msa0072940 | AT1G06620.2 | 26.296 | 270 | 142 | 8 | 24 | 248 | 25 | 282 | 5.51e-16 | 77.4 |
Msa0072940 | AT5G43440.2 | 24.907 | 269 | 148 | 7 | 25 | 248 | 23 | 282 | 1.38e-15 | 76.3 |
Msa0072940 | AT4G21200.1 | 25.818 | 275 | 144 | 9 | 61 | 288 | 38 | 299 | 1.80e-15 | 76.6 |
Msa0072940 | AT1G50960.1 | 26.165 | 279 | 145 | 8 | 45 | 274 | 20 | 286 | 4.92e-15 | 75.5 |
Msa0072940 | AT4G22870.1 | 37.234 | 94 | 58 | 1 | 219 | 311 | 3 | 96 | 1.34e-14 | 69.7 |
Msa0072940 | AT1G05010.1 | 25.180 | 278 | 144 | 7 | 65 | 292 | 4 | 267 | 1.70e-14 | 73.6 |
Msa0072940 | AT5G43450.2 | 24.254 | 268 | 148 | 7 | 25 | 248 | 23 | 279 | 1.19e-13 | 70.9 |
Msa0072940 | AT3G19010.2 | 26.740 | 273 | 120 | 11 | 41 | 249 | 8 | 264 | 7.17e-13 | 68.6 |
Msa0072940 | AT4G22870.2 | 36.364 | 88 | 55 | 1 | 225 | 311 | 50 | 137 | 3.56e-12 | 63.9 |
Msa0072940 | AT5G63595.1 | 25.225 | 222 | 112 | 5 | 80 | 272 | 53 | 249 | 2.39e-11 | 63.9 |
Find 68 sgRNAs with CRISPR-Local
Find 226 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGAAGAACTTGGGGCCTATT+TGG | 0.213981 | 1_2:+46085747 | None:intergenic |
ACACTTATTTCTAAGGTTAA+TGG | 0.222487 | 1_2:-46082871 | Msa0072940:CDS |
ACAACGAATGCATTATTAAT+AGG | 0.241440 | 1_2:+46082509 | None:intergenic |
AAACCAAACACTTATTTCTA+AGG | 0.253076 | 1_2:-46082878 | Msa0072940:CDS |
TGAACCATTGTTCTTGGAAT+TGG | 0.275458 | 1_2:+46082540 | None:intergenic |
CTGATTTGATTGGTCCAAAT+AGG | 0.299399 | 1_2:-46085761 | Msa0072940:CDS |
ATCGGTGTCTGCGTAACGTT+TGG | 0.310799 | 1_2:+46081304 | None:intergenic |
AAATCAGAGAAATCTATTAT+TGG | 0.318250 | 1_2:+46085777 | None:intergenic |
GGACAATATTATCAAAGAAT+TGG | 0.341222 | 1_2:-46082799 | Msa0072940:CDS |
GAACCGTGAACCATTGTTCT+TGG | 0.352914 | 1_2:+46082534 | None:intergenic |
CTTAAGTCCACGGGTGAATC+AGG | 0.362636 | 1_2:+46084528 | None:intergenic |
TGCCTGATTATCTTCCTCAT+TGG | 0.367558 | 1_2:-46084551 | Msa0072940:CDS |
AATCTATTATTGGTAGTTGT+AGG | 0.377947 | 1_2:+46085787 | None:intergenic |
ATAGATTTCTCTGATTTGAT+TGG | 0.378631 | 1_2:-46085771 | Msa0072940:CDS |
TACTTACCTCTTTCCTCAAA+TGG | 0.387893 | 1_2:+46084681 | None:intergenic |
CTGATTCACCCGTGGACTTA+AGG | 0.394075 | 1_2:-46084527 | Msa0072940:intron |
TATACCTAAACTCTCTACTA+TGG | 0.399689 | 1_2:+46082845 | None:intergenic |
GTCAAGCAGCTAGTTGATAA+TGG | 0.406429 | 1_2:-46085897 | Msa0072940:CDS |
GGAAGATGGAAGCCAGCTTA+TGG | 0.408489 | 1_2:-46082778 | Msa0072940:CDS |
ATGAGAGCAGCAGTTCGATA+TGG | 0.411261 | 1_2:-46084645 | Msa0072940:CDS |
GGCCAATGAGGAAGATAATC+AGG | 0.414428 | 1_2:+46084549 | None:intergenic |
TAACCTTAGAAATAAGTGTT+TGG | 0.414596 | 1_2:+46082875 | None:intergenic |
ACTCTTTCTCTTGGTTTCGT+TGG | 0.418266 | 1_2:+46081253 | None:intergenic |
GAATCTTCTGTATTCTTAGC+AGG | 0.420646 | 1_2:+46085828 | None:intergenic |
TCGGTGTCTGCGTAACGTTT+GGG | 0.421674 | 1_2:+46081305 | None:intergenic |
GAAGCCATAGTAGAGAGTTT+AGG | 0.422645 | 1_2:-46082849 | Msa0072940:CDS |
GTCTGCGTAACGTTTGGGAT+TGG | 0.431669 | 1_2:+46081310 | None:intergenic |
CTCCAGAAAACTCTTTCTCT+TGG | 0.443477 | 1_2:+46081244 | None:intergenic |
GGCAAGAAAAGTTTCAAAAT+CGG | 0.448587 | 1_2:+46081286 | None:intergenic |
TTAATTAAAATGTAGGAAAG+TGG | 0.466796 | 1_2:-46082919 | Msa0072940:intron |
CAAAAGACAAAGTGTTCTGT+TGG | 0.471022 | 1_2:-46084605 | Msa0072940:CDS |
AATACAAGAGTGTGCTACAT+AGG | 0.473985 | 1_2:-46081433 | Msa0072940:CDS |
ACATAAGATGTCAGCTGGAA+TGG | 0.482317 | 1_2:-46085979 | None:intergenic |
TGAAGCCAACAAAGAAGAAA+AGG | 0.484492 | 1_2:-46082820 | Msa0072940:CDS |
GATCTTCCATTTGAGGAAAG+AGG | 0.501424 | 1_2:-46084687 | Msa0072940:CDS |
GGTTTCGTTGGTTGAAATGT+GGG | 0.516096 | 1_2:+46081265 | None:intergenic |
TAACATCTTCTGAGATTCCA+TGG | 0.516143 | 1_2:+46084745 | None:intergenic |
ATTATCAAAGAATTGGAAGA+TGG | 0.516585 | 1_2:-46082792 | Msa0072940:CDS |
TAGTTAGTGAAGATATCAAA+GGG | 0.523214 | 1_2:-46085953 | Msa0072940:CDS |
TGGTTTCGTTGGTTGAAATG+TGG | 0.525695 | 1_2:+46081264 | None:intergenic |
ATATTACATAAGATGTCAGC+TGG | 0.526489 | 1_2:-46085984 | None:intergenic |
ATAGAAAATCAATTTCTGAA+TGG | 0.536962 | 1_2:-46085921 | Msa0072940:CDS |
ATTCCAAGAACAATGGTTCA+CGG | 0.541633 | 1_2:-46082537 | Msa0072940:CDS |
TTCTTAGCAGGACGTTCAGA+AGG | 0.559675 | 1_2:+46085840 | None:intergenic |
GTGTTTGGTTTCTTCTGCGT+AGG | 0.567429 | 1_2:+46082890 | None:intergenic |
ATAGTTAGTGAAGATATCAA+AGG | 0.575844 | 1_2:-46085954 | Msa0072940:CDS |
AATGCATTCGTTGTCAATGT+TGG | 0.578383 | 1_2:-46082500 | Msa0072940:CDS |
ATACAAGAGTGTGCTACATA+GGG | 0.579473 | 1_2:-46081432 | Msa0072940:CDS |
TTGATAAAGGTGGTAAACCA+TGG | 0.580589 | 1_2:-46084762 | Msa0072940:intron |
TTAGCAGGACGTTCAGAAGG+AGG | 0.581753 | 1_2:+46085843 | None:intergenic |
AAATACACACCTTAAGTCCA+CGG | 0.583362 | 1_2:+46084518 | None:intergenic |
AGATGTTATCAACAACATGA+TGG | 0.583825 | 1_2:-46084730 | Msa0072940:CDS |
ATTAAAATGTAGGAAAGTGG+CGG | 0.593821 | 1_2:-46082916 | Msa0072940:intron |
GAAGATAATCAGGCAAAGGA+TGG | 0.594394 | 1_2:+46084559 | None:intergenic |
GAAGATATCAAAGGGGTCGA+TGG | 0.595999 | 1_2:-46085945 | Msa0072940:CDS |
TGAGGAAGATAATCAGGCAA+AGG | 0.601191 | 1_2:+46084555 | None:intergenic |
TCATTGGCCTGATTCACCCG+TGG | 0.604316 | 1_2:-46084535 | Msa0072940:CDS |
AATGCTATGCAATGAAGCAA+TGG | 0.614624 | 1_2:+46081379 | None:intergenic |
TTGGCTTTGTCAATGAGTGT+AGG | 0.614803 | 1_2:+46081329 | None:intergenic |
AATACACACCTTAAGTCCAC+GGG | 0.616230 | 1_2:+46084519 | None:intergenic |
AAGTCCAATTCCAAGAACAA+TGG | 0.641965 | 1_2:-46082544 | Msa0072940:CDS |
ACGGGTGAATCAGGCCAATG+AGG | 0.642092 | 1_2:+46084537 | None:intergenic |
AGATGGAAGCCAGCTTATGG+CGG | 0.651529 | 1_2:-46082775 | Msa0072940:CDS |
TTGTCAATGAGTGTAGGTGA+CGG | 0.654799 | 1_2:+46081335 | None:intergenic |
CAATGTTGGTGATCACCTTG+AGG | 0.661702 | 1_2:-46082486 | Msa0072940:intron |
AGTTGATAATGGACTTCACA+TGG | 0.677332 | 1_2:-46085886 | Msa0072940:CDS |
AACAACATGATGGATGTGTG+TGG | 0.705462 | 1_2:-46084720 | Msa0072940:CDS |
AGTTAGTGAAGATATCAAAG+GGG | 0.743882 | 1_2:-46085952 | Msa0072940:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATTAATAAATTATATAATA+TGG | - | chr1_2:46085431-46085450 | Msa0072940:intron | 0.0% |
!! | ATAAATAAATAACTTAGTTA+TGG | - | chr1_2:46081560-46081579 | Msa0072940:intron | 10.0% |
!!! | GATTAAAGTAAATAAATTTT+TGG | - | chr1_2:46081758-46081777 | Msa0072940:intron | 10.0% |
!!! | TAAAAGTTTTCAATTTTATA+AGG | + | chr1_2:46081801-46081820 | None:intergenic | 10.0% |
!! | AAAACTATTAAAATTAAGTA+AGG | + | chr1_2:46081832-46081851 | None:intergenic | 10.0% |
!! | TAATCCTATTAAAAAATTTA+GGG | + | chr1_2:46082215-46082234 | None:intergenic | 10.0% |
!! | TTAATCCTATTAAAAAATTT+AGG | + | chr1_2:46082216-46082235 | None:intergenic | 10.0% |
!!! | TAATATTTTGAACAATTATT+AGG | + | chr1_2:46082919-46082938 | None:intergenic | 10.0% |
!! | ATTGTATATATATACATTAA+GGG | + | chr1_2:46083325-46083344 | None:intergenic | 10.0% |
!! | AATTGTATATATATACATTA+AGG | + | chr1_2:46083326-46083345 | None:intergenic | 10.0% |
!! | CATTATATCAATAATAAATA+AGG | - | chr1_2:46083503-46083522 | Msa0072940:intron | 10.0% |
!!! | TTGATTTTTAATTAAAATGT+AGG | - | chr1_2:46084254-46084273 | Msa0072940:intron | 10.0% |
!! | TATAACAAGATAAATTATAT+TGG | + | chr1_2:46085244-46085263 | None:intergenic | 10.0% |
!! | GTTAAACCTTATAAAAATAT+CGG | - | chr1_2:46081582-46081601 | Msa0072940:intron | 15.0% |
!!! | ATTTAACCGATATTTTTATA+AGG | + | chr1_2:46081591-46081610 | None:intergenic | 15.0% |
!!! | TACATGTAAATATTTTTTGT+AGG | + | chr1_2:46081862-46081881 | None:intergenic | 15.0% |
!! | TTCAAAAATTTAAGAGTTTA+AGG | + | chr1_2:46081922-46081941 | None:intergenic | 15.0% |
!! | AGATAAAAACAACAAAAATT+TGG | - | chr1_2:46082055-46082074 | Msa0072940:intron | 15.0% |
!!! | TAATAAAGTCTCAATTTTAT+AGG | - | chr1_2:46082171-46082190 | Msa0072940:intron | 15.0% |
!!! | AATAAAGTCTCAATTTTATA+GGG | - | chr1_2:46082172-46082191 | Msa0072940:intron | 15.0% |
!!! | TTAACCCTAAATTTTTTAAT+AGG | - | chr1_2:46082208-46082227 | Msa0072940:intron | 15.0% |
!!! | TTGTGTATTATAATTTGTTT+AGG | - | chr1_2:46082853-46082872 | Msa0072940:CDS | 15.0% |
!!! | TGTGTATTATAATTTGTTTA+GGG | - | chr1_2:46082854-46082873 | Msa0072940:CDS | 15.0% |
!!! | TTTTTAAAGATACAAATTAG+TGG | - | chr1_2:46083696-46083715 | Msa0072940:intron | 15.0% |
!!! | ATGATATATGTAATCATTTT+TGG | - | chr1_2:46085097-46085116 | Msa0072940:intron | 15.0% |
!!! | TGATATATGTAATCATTTTT+GGG | - | chr1_2:46085098-46085117 | Msa0072940:intron | 15.0% |
!!! | ATTTTCTTCTTTATTCTTTT+GGG | - | chr1_2:46085138-46085157 | Msa0072940:intron | 15.0% |
!! | ATGTAATATTTAAATGTGTA+GGG | + | chr1_2:46085457-46085476 | None:intergenic | 15.0% |
!! | AATGTAATATTTAAATGTGT+AGG | + | chr1_2:46085458-46085477 | None:intergenic | 15.0% |
!! | ATAGAAAATCAATTTCTGAA+TGG | - | chr1_2:46081259-46081278 | Msa0072940:CDS | 20.0% |
!! | AAATCAGAGAAATCTATTAT+TGG | + | chr1_2:46081406-46081425 | None:intergenic | 20.0% |
!! | TAATTCCATAAATGCAAATA+AGG | + | chr1_2:46081681-46081700 | None:intergenic | 20.0% |
!!! | CATTTCAAAATTTGATTTCT+AGG | + | chr1_2:46082082-46082101 | None:intergenic | 20.0% |
!!! | ATTTTGAAATGACTTTTTTG+CGG | - | chr1_2:46082091-46082110 | Msa0072940:intron | 20.0% |
!!! | TTTAGGGTTAAATATGTTTT+TGG | + | chr1_2:46082199-46082218 | None:intergenic | 20.0% |
!!! | TTTTGTGTTTTGTTTGATAA+AGG | - | chr1_2:46082405-46082424 | Msa0072940:intron | 20.0% |
!!! | GTGTATTATAATTTGTTTAG+GGG | - | chr1_2:46082855-46082874 | Msa0072940:CDS | 20.0% |
!! | TAGAAAAGTCATAAATAAGT+CGG | - | chr1_2:46083103-46083122 | Msa0072940:intron | 20.0% |
!! | CAAAATTTAACCTAAAACAA+TGG | - | chr1_2:46083968-46083987 | Msa0072940:intron | 20.0% |
!! | ATTAGTAGATATACTTACAA+AGG | + | chr1_2:46084020-46084039 | None:intergenic | 20.0% |
!! | AGTATATCTACTAATTTGAT+AGG | - | chr1_2:46084025-46084044 | Msa0072940:intron | 20.0% |
!! | TCCCTAAAAAAATTGAATAT+AGG | - | chr1_2:46084093-46084112 | Msa0072940:intron | 20.0% |
!!! | CCCTATATTCAATTTTTTTA+GGG | + | chr1_2:46084097-46084116 | None:intergenic | 20.0% |
!! | CCCTAAAAAAATTGAATATA+GGG | - | chr1_2:46084094-46084113 | Msa0072940:intron | 20.0% |
!!! | TCCCTATATTCAATTTTTTT+AGG | + | chr1_2:46084098-46084117 | None:intergenic | 20.0% |
!! | ATACTATATTGTAATTGTTG+AGG | + | chr1_2:46084221-46084240 | None:intergenic | 20.0% |
!! | TTAATTAAAATGTAGGAAAG+TGG | - | chr1_2:46084261-46084280 | Msa0072940:intron | 20.0% |
!! | TTAAACTTACAACTAACTAA+TGG | + | chr1_2:46084734-46084753 | None:intergenic | 20.0% |
!! | TTAGTTAGTTGTAAGTTTAA+TGG | - | chr1_2:46084734-46084753 | Msa0072940:CDS | 20.0% |
!! | GTAATCAGATATCATATAAT+TGG | - | chr1_2:46084844-46084863 | Msa0072940:intron | 20.0% |
!!! | TTAGTTTTGTCTTAACTAAT+AGG | - | chr1_2:46085012-46085031 | Msa0072940:intron | 20.0% |
!! | TCTCTATAAATAAATCGTTA+TGG | + | chr1_2:46085076-46085095 | None:intergenic | 20.0% |
!!! | CATTTTCTTCTTTATTCTTT+TGG | - | chr1_2:46085137-46085156 | Msa0072940:intron | 20.0% |
!!! | ATATTGGTACAAACTTATTT+TGG | + | chr1_2:46085228-46085247 | None:intergenic | 20.0% |
!! | TCTTAAAAAATATGTGTAGA+TGG | + | chr1_2:46085361-46085380 | None:intergenic | 20.0% |
! | ATAGTTAGTGAAGATATCAA+AGG | - | chr1_2:46081226-46081245 | Msa0072940:CDS | 25.0% |
! | TAGTTAGTGAAGATATCAAA+GGG | - | chr1_2:46081227-46081246 | Msa0072940:CDS | 25.0% |
!! | AATCTATTATTGGTAGTTGT+AGG | + | chr1_2:46081396-46081415 | None:intergenic | 25.0% |
!! | ATAGATTTCTCTGATTTGAT+TGG | - | chr1_2:46081409-46081428 | Msa0072940:CDS | 25.0% |
!! | GTTAGTATATGAAAGTTTTG+TGG | + | chr1_2:46081511-46081530 | None:intergenic | 25.0% |
!! | TTAGTCCTTATTTGCATTTA+TGG | - | chr1_2:46081673-46081692 | Msa0072940:intron | 25.0% |
!!! | AAAATGAGTGTTTTAGTTCT+TGG | + | chr1_2:46081715-46081734 | None:intergenic | 25.0% |
!!! | TTTTTGGGTAAACATGTTTT+TGG | - | chr1_2:46081774-46081793 | Msa0072940:intron | 25.0% |
!! | CAAGTTTAGAACATTACAAA+AGG | - | chr1_2:46081956-46081975 | Msa0072940:intron | 25.0% |
!!! | ATTTTTTGATCTTCCATTTG+AGG | - | chr1_2:46082486-46082505 | Msa0072940:intron | 25.0% |
! | CATAATCATATAATAAGTCC+TGG | - | chr1_2:46082798-46082817 | Msa0072940:CDS | 25.0% |
! | TATTAGGTATCCATTTACAA+TGG | + | chr1_2:46082903-46082922 | None:intergenic | 25.0% |
! | AATCAACCAACTTTCTTAAT+TGG | - | chr1_2:46082960-46082979 | Msa0072940:intron | 25.0% |
! | TTTGTACCAATTAAGAAAGT+TGG | + | chr1_2:46082969-46082988 | None:intergenic | 25.0% |
! | ACACAATAAAAGTAGAAGTT+GGG | + | chr1_2:46083084-46083103 | None:intergenic | 25.0% |
! | TACACAATAAAAGTAGAAGT+TGG | + | chr1_2:46083085-46083104 | None:intergenic | 25.0% |
! | AGAAAAGTCATAAATAAGTC+GGG | - | chr1_2:46083104-46083123 | Msa0072940:intron | 25.0% |
! | AATTATTTAGAGGACACAAT+TGG | + | chr1_2:46083463-46083482 | None:intergenic | 25.0% |
!!! | AAACGACACGTATTTTAAAA+AGG | - | chr1_2:46083592-46083611 | Msa0072940:intron | 25.0% |
!! | ACAAATTAGTGGTCTTAATT+AGG | - | chr1_2:46083707-46083726 | Msa0072940:intron | 25.0% |
! | ATTAGGTTATGTTTGGTAAA+AGG | - | chr1_2:46083724-46083743 | Msa0072940:intron | 25.0% |
!! | TGTGAAGTTTGAAATCTTAA+AGG | - | chr1_2:46083764-46083783 | Msa0072940:intron | 25.0% |
!!! | AAACCAAACACTTATTTCTA+AGG | - | chr1_2:46084302-46084321 | Msa0072940:intron | 25.0% |
! | TAACCTTAGAAATAAGTGTT+TGG | + | chr1_2:46084308-46084327 | None:intergenic | 25.0% |
!!! | ACACTTATTTCTAAGGTTAA+TGG | - | chr1_2:46084309-46084328 | Msa0072940:intron | 25.0% |
! | GGACAATATTATCAAAGAAT+TGG | - | chr1_2:46084381-46084400 | Msa0072940:intron | 25.0% |
! | ATTATCAAAGAATTGGAAGA+TGG | - | chr1_2:46084388-46084407 | Msa0072940:intron | 25.0% |
! | ACAACGAATGCATTATTAAT+AGG | + | chr1_2:46084674-46084693 | None:intergenic | 25.0% |
! | CATAAAACAATAAACTCTCA+TGG | - | chr1_2:46084903-46084922 | Msa0072940:intron | 25.0% |
! | ATGAAATTCTGATATTGCAA+TGG | - | chr1_2:46084981-46085000 | Msa0072940:intron | 25.0% |
!!! | TGCTTTGTTGTTAGAAATTT+TGG | + | chr1_2:46085514-46085533 | None:intergenic | 25.0% |
! | ATCTTACCATTGAGTTAAAA+TGG | - | chr1_2:46085539-46085558 | Msa0072940:intron | 25.0% |
! | GAAGAATTAGCAACTTAAAT+AGG | + | chr1_2:46085691-46085710 | None:intergenic | 25.0% |
AGTTAGTGAAGATATCAAAG+GGG | - | chr1_2:46081228-46081247 | Msa0072940:CDS | 30.0% | |
! | AAAGAAATTTTGTCCTAGCA+GGG | + | chr1_2:46081893-46081912 | None:intergenic | 30.0% |
! | TAAAGAAATTTTGTCCTAGC+AGG | + | chr1_2:46081894-46081913 | None:intergenic | 30.0% |
!!! | TGTGTTTTGTTTGATAAAGG+TGG | - | chr1_2:46082408-46082427 | Msa0072940:intron | 30.0% |
AGATGTTATCAACAACATGA+TGG | - | chr1_2:46082450-46082469 | Msa0072940:intron | 30.0% | |
TAATCAATTCAATCTCTACG+TGG | - | chr1_2:46082715-46082734 | Msa0072940:intron | 30.0% | |
CTCTTCATTAAATTAGTACC+AGG | + | chr1_2:46082819-46082838 | None:intergenic | 30.0% | |
TTGGTACAAATTTGTCAATG+AGG | - | chr1_2:46082979-46082998 | Msa0072940:intron | 30.0% | |
! | AGAAGCTACTTTAAAAGAGA+AGG | + | chr1_2:46083043-46083062 | None:intergenic | 30.0% |
TTGTTAGCATTTCCATACTT+AGG | + | chr1_2:46083140-46083159 | None:intergenic | 30.0% | |
AACAAATGCAGCACTTATTA+AGG | - | chr1_2:46083155-46083174 | Msa0072940:intron | 30.0% | |
!! | AAACGACACTCATTTTGAAA+CGG | + | chr1_2:46083370-46083389 | None:intergenic | 30.0% |
! | AGTGTCACTCAATTATTTAG+AGG | + | chr1_2:46083473-46083492 | None:intergenic | 30.0% |
GGTCTTAATTAGGTTATGTT+TGG | - | chr1_2:46083717-46083736 | Msa0072940:intron | 30.0% | |
TTTCTTCTTCTACTAACAGA+TGG | + | chr1_2:46083860-46083879 | None:intergenic | 30.0% | |
! | TTCTCTTTTCTATATCTCTC+TGG | - | chr1_2:46084159-46084178 | Msa0072940:intron | 30.0% |
! | TCTCTTTTCTATATCTCTCT+GGG | - | chr1_2:46084160-46084179 | Msa0072940:intron | 30.0% |
ATTAAAATGTAGGAAAGTGG+CGG | - | chr1_2:46084264-46084283 | Msa0072940:intron | 30.0% | |
TATACCTAAACTCTCTACTA+TGG | + | chr1_2:46084338-46084357 | None:intergenic | 30.0% | |
! | ATTGTCCTTTTCTTCTTTGT+TGG | + | chr1_2:46084368-46084387 | None:intergenic | 30.0% |
!!! | TCATTTTTGGGACAACTTTT+AGG | - | chr1_2:46085110-46085129 | Msa0072940:intron | 30.0% |
GGCAAGAAAAGTTTCAAAAT+CGG | + | chr1_2:46085897-46085916 | None:intergenic | 30.0% | |
!! | AGTTGATAATGGACTTCACA+TGG | - | chr1_2:46081294-46081313 | Msa0072940:CDS | 35.0% |
!! | GGAGGAAGTATGTACTTTTT+AGG | + | chr1_2:46081322-46081341 | None:intergenic | 35.0% |
GAATCTTCTGTATTCTTAGC+AGG | + | chr1_2:46081355-46081374 | None:intergenic | 35.0% | |
!!! | TGGTAGTTGTAGGTTTTGTT+TGG | + | chr1_2:46081386-46081405 | None:intergenic | 35.0% |
! | CTGATTTGATTGGTCCAAAT+AGG | - | chr1_2:46081419-46081438 | Msa0072940:CDS | 35.0% |
AGCTAATGACTGAAGAACTT+GGG | + | chr1_2:46081446-46081465 | None:intergenic | 35.0% | |
TAGCTAATGACTGAAGAACT+TGG | + | chr1_2:46081447-46081466 | None:intergenic | 35.0% | |
CATTAGCTAATGCTTGTGAA+CGG | - | chr1_2:46081458-46081477 | Msa0072940:intron | 35.0% | |
!!! | TGTTTTAGTTCTTGGCTTCT+TGG | + | chr1_2:46081707-46081726 | None:intergenic | 35.0% |
!! | ATGTAATTTTAGTCCCTGCT+AGG | - | chr1_2:46081877-46081896 | Msa0072940:intron | 35.0% |
TTGATAAAGGTGGTAAACCA+TGG | - | chr1_2:46082418-46082437 | Msa0072940:intron | 35.0% | |
!! | TAACATCTTCTGAGATTCCA+TGG | + | chr1_2:46082438-46082457 | None:intergenic | 35.0% |
TACTTACCTCTTTCCTCAAA+TGG | + | chr1_2:46082502-46082521 | None:intergenic | 35.0% | |
! | CAAAAGACAAAGTGTTCTGT+TGG | - | chr1_2:46082575-46082594 | Msa0072940:intron | 35.0% |
AAATACACACCTTAAGTCCA+CGG | + | chr1_2:46082665-46082684 | None:intergenic | 35.0% | |
GATAGTTGGTCCATTGTAAA+TGG | - | chr1_2:46082890-46082909 | Msa0072940:CDS | 35.0% | |
CTTCTATGCCTCAAAAAAGT+TGG | - | chr1_2:46083058-46083077 | Msa0072940:intron | 35.0% | |
AAATGTTAAAGAATGCCCGT+AGG | + | chr1_2:46083302-46083321 | None:intergenic | 35.0% | |
!! | ACCTAAAACAATGGTTTTGC+TGG | - | chr1_2:46083977-46083996 | Msa0072940:intron | 35.0% |
TGAAGCCAACAAAGAAGAAA+AGG | - | chr1_2:46084360-46084379 | Msa0072940:intron | 35.0% | |
AAGTCCAATTCCAAGAACAA+TGG | - | chr1_2:46084636-46084655 | Msa0072940:CDS | 35.0% | |
TGAACCATTGTTCTTGGAAT+TGG | + | chr1_2:46084643-46084662 | None:intergenic | 35.0% | |
ATTCCAAGAACAATGGTTCA+CGG | - | chr1_2:46084643-46084662 | Msa0072940:CDS | 35.0% | |
AATGCATTCGTTGTCAATGT+TGG | - | chr1_2:46084680-46084699 | Msa0072940:CDS | 35.0% | |
AAAACACTAGAGAGAGAAAG+AGG | - | chr1_2:46085163-46085182 | Msa0072940:intron | 35.0% | |
AAACACTAGAGAGAGAAAGA+GGG | - | chr1_2:46085164-46085183 | Msa0072940:intron | 35.0% | |
ACCATTGAGTTAAAATGGCA+TGG | - | chr1_2:46085544-46085563 | Msa0072940:intron | 35.0% | |
!!! | TCCATGCCATTTTAACTCAA+TGG | + | chr1_2:46085548-46085567 | None:intergenic | 35.0% |
!!! | GCTTCTCAGATTTTTAGCAA+CGG | - | chr1_2:46085722-46085741 | Msa0072940:intron | 35.0% |
!!! | CTTCTCAGATTTTTAGCAAC+GGG | - | chr1_2:46085723-46085742 | Msa0072940:intron | 35.0% |
! | AATACAAGAGTGTGCTACAT+AGG | - | chr1_2:46085747-46085766 | Msa0072940:intron | 35.0% |
! | ATACAAGAGTGTGCTACATA+GGG | - | chr1_2:46085748-46085767 | Msa0072940:intron | 35.0% |
AATGCTATGCAATGAAGCAA+TGG | + | chr1_2:46085804-46085823 | None:intergenic | 35.0% | |
! | AACCAAGAGAAAGAGTTTTC+TGG | - | chr1_2:46085934-46085953 | Msa0072940:CDS | 35.0% |
!! | GTCAAGCAGCTAGTTGATAA+TGG | - | chr1_2:46081283-46081302 | Msa0072940:CDS | 40.0% |
GCTAATGACTGAAGAACTTG+GGG | + | chr1_2:46081445-46081464 | None:intergenic | 40.0% | |
! | TGAACGGTATGGAATTTTCC+AGG | - | chr1_2:46081474-46081493 | Msa0072940:intron | 40.0% |
!! | AACAACATGATGGATGTGTG+TGG | - | chr1_2:46082460-46082479 | Msa0072940:intron | 40.0% |
GATCTTCCATTTGAGGAAAG+AGG | - | chr1_2:46082493-46082512 | Msa0072940:CDS | 40.0% | |
GAAGATAATCAGGCAAAGGA+TGG | + | chr1_2:46082624-46082643 | None:intergenic | 40.0% | |
TGAGGAAGATAATCAGGCAA+AGG | + | chr1_2:46082628-46082647 | None:intergenic | 40.0% | |
TGCCTGATTATCTTCCTCAT+TGG | - | chr1_2:46082629-46082648 | Msa0072940:intron | 40.0% | |
AATACACACCTTAAGTCCAC+GGG | + | chr1_2:46082664-46082683 | None:intergenic | 40.0% | |
TGTTTAGGGGACAAGTTCTA+CGG | - | chr1_2:46082868-46082887 | Msa0072940:CDS | 40.0% | |
! | TGTCAATGAGGTCTTATACC+CGG | - | chr1_2:46082991-46083010 | Msa0072940:intron | 40.0% |
TACCACTACTTTCCATTTCC+CGG | + | chr1_2:46083013-46083032 | None:intergenic | 40.0% | |
!!! | AAGTTGGGCCAACTTTTTTG+AGG | + | chr1_2:46083069-46083088 | None:intergenic | 40.0% |
! | GCCAGCAAAACCATTGTTTT+AGG | + | chr1_2:46083981-46084000 | None:intergenic | 40.0% |
GAAGCCATAGTAGAGAGTTT+AGG | - | chr1_2:46084331-46084350 | Msa0072940:intron | 40.0% | |
AAAAATTTGCCGCCATAAGC+TGG | + | chr1_2:46084417-46084436 | None:intergenic | 40.0% | |
AATCCATAGTCAGAATGAGG+GGG | + | chr1_2:46084478-46084497 | None:intergenic | 40.0% | |
GAATCCATAGTCAGAATGAG+GGG | + | chr1_2:46084479-46084498 | None:intergenic | 40.0% | |
GGAATCCATAGTCAGAATGA+GGG | + | chr1_2:46084480-46084499 | None:intergenic | 40.0% | |
GAATATCCATCCATACCTCA+AGG | + | chr1_2:46084712-46084731 | None:intergenic | 40.0% | |
GGTCACTAATTGTAGATGAC+AGG | + | chr1_2:46085055-46085074 | None:intergenic | 40.0% | |
TTGTCAATGAGTGTAGGTGA+CGG | + | chr1_2:46085848-46085867 | None:intergenic | 40.0% | |
!! | TTGGCTTTGTCAATGAGTGT+AGG | + | chr1_2:46085854-46085873 | None:intergenic | 40.0% |
! | GGTTTCGTTGGTTGAAATGT+GGG | + | chr1_2:46085918-46085937 | None:intergenic | 40.0% |
! | TGGTTTCGTTGGTTGAAATG+TGG | + | chr1_2:46085919-46085938 | None:intergenic | 40.0% |
ACTCTTTCTCTTGGTTTCGT+TGG | + | chr1_2:46085930-46085949 | None:intergenic | 40.0% | |
CTCCAGAAAACTCTTTCTCT+TGG | + | chr1_2:46085939-46085958 | None:intergenic | 40.0% | |
!!! | GAAAGAGTTTTCTGGAGTCT+AGG | - | chr1_2:46085942-46085961 | Msa0072940:CDS | 40.0% |
GAAGATATCAAAGGGGTCGA+TGG | - | chr1_2:46081235-46081254 | Msa0072940:CDS | 45.0% | |
TTCTTAGCAGGACGTTCAGA+AGG | + | chr1_2:46081343-46081362 | None:intergenic | 45.0% | |
TGAAGAACTTGGGGCCTATT+TGG | + | chr1_2:46081436-46081455 | None:intergenic | 45.0% | |
GCTAATGCTTGTGAACGGTA+TGG | - | chr1_2:46081463-46081482 | Msa0072940:intron | 45.0% | |
TTTGTGGTTGATTGCTCACC+TGG | + | chr1_2:46081495-46081514 | None:intergenic | 45.0% | |
ATGAGAGCAGCAGTTCGATA+TGG | - | chr1_2:46082535-46082554 | Msa0072940:CDS | 45.0% | |
GGCCAATGAGGAAGATAATC+AGG | + | chr1_2:46082634-46082653 | None:intergenic | 45.0% | |
GGACAAGTTCTACGGATAGT+TGG | - | chr1_2:46082876-46082895 | Msa0072940:CDS | 45.0% | |
! | GTCAATGAGGTCTTATACCC+GGG | - | chr1_2:46082992-46083011 | Msa0072940:intron | 45.0% |
ACCACTACTTTCCATTTCCC+GGG | + | chr1_2:46083012-46083031 | None:intergenic | 45.0% | |
GGTCAAACGCTACCTAAGTA+TGG | - | chr1_2:46083125-46083144 | Msa0072940:intron | 45.0% | |
! | CCGTAGGACATTGGTTAAGA+GGG | + | chr1_2:46083286-46083305 | None:intergenic | 45.0% |
CCCTCTTAACCAATGTCCTA+CGG | - | chr1_2:46083283-46083302 | Msa0072940:intron | 45.0% | |
CCTCTTAACCAATGTCCTAC+GGG | - | chr1_2:46083284-46083303 | Msa0072940:intron | 45.0% | |
AAAGAATGCCCGTAGGACAT+TGG | + | chr1_2:46083295-46083314 | None:intergenic | 45.0% | |
CTCATTGTCACAGATGTGCT+TGG | + | chr1_2:46083813-46083832 | None:intergenic | 45.0% | |
! | TGCTGGCCTGATGATTCATA+CGG | - | chr1_2:46083994-46084013 | Msa0072940:intron | 45.0% |
CAAAGGCCGTATGAATCATC+AGG | + | chr1_2:46084003-46084022 | None:intergenic | 45.0% | |
! | GTGTTTGGTTTCTTCTGCGT+AGG | + | chr1_2:46084293-46084312 | None:intergenic | 45.0% |
CTTCTACCTCATCTTGGAGA+AGG | + | chr1_2:46084610-46084629 | None:intergenic | 45.0% | |
CTTCTCCAAGATGAGGTAGA+AGG | - | chr1_2:46084608-46084627 | Msa0072940:CDS | 45.0% | |
GCAAACCTTCTACCTCATCT+TGG | + | chr1_2:46084616-46084635 | None:intergenic | 45.0% | |
GAACCGTGAACCATTGTTCT+TGG | + | chr1_2:46084649-46084668 | None:intergenic | 45.0% | |
!! | CAATGTTGGTGATCACCTTG+AGG | - | chr1_2:46084694-46084713 | Msa0072940:CDS | 45.0% |
! | TTGGTGATCACCTTGAGGTA+TGG | - | chr1_2:46084699-46084718 | Msa0072940:CDS | 45.0% |
TGATCACCTTGAGGTATGGA+TGG | - | chr1_2:46084703-46084722 | Msa0072940:CDS | 45.0% | |
!! | TGTATAAATTAATAAAAATA+TGG | - | chr1_2:46081736-46081755 | Msa0072940:intron | 5.0% |
!!! | ATTAAAGTAAATAAATTTTT+GGG | - | chr1_2:46081759-46081778 | Msa0072940:intron | 5.0% |
!!! | ATTATTTATATTTTTATGAT+AGG | + | chr1_2:46085331-46085350 | None:intergenic | 5.0% |
!! | TTTATTTCATATAAAATTTA+TGG | + | chr1_2:46085399-46085418 | None:intergenic | 5.0% |
TTAGCAGGACGTTCAGAAGG+AGG | + | chr1_2:46081340-46081359 | None:intergenic | 50.0% | |
CTTAAGTCCACGGGTGAATC+AGG | + | chr1_2:46082655-46082674 | None:intergenic | 50.0% | |
CTGATTCACCCGTGGACTTA+AGG | - | chr1_2:46082653-46082672 | Msa0072940:intron | 50.0% | |
! | GAGGTCTTATACCCGGGAAA+TGG | - | chr1_2:46082998-46083017 | Msa0072940:intron | 50.0% |
ACCCGGGAAATGGAAAGTAG+TGG | - | chr1_2:46083008-46083027 | Msa0072940:intron | 50.0% | |
! | CCCGTAGGACATTGGTTAAG+AGG | + | chr1_2:46083287-46083306 | None:intergenic | 50.0% |
GGAAGATGGAAGCCAGCTTA+TGG | - | chr1_2:46084402-46084421 | Msa0072940:intron | 50.0% | |
AGATGGAAGCCAGCTTATGG+CGG | - | chr1_2:46084405-46084424 | Msa0072940:intron | 50.0% | |
!! | GTTAGGTCAGGTTGAGGACA+TGG | + | chr1_2:46084445-46084464 | None:intergenic | 50.0% |
CTCAACCTGACCTAACCCTA+GGG | - | chr1_2:46084449-46084468 | Msa0072940:intron | 50.0% | |
ATGCCCCCTCATTCTGACTA+TGG | - | chr1_2:46084472-46084491 | Msa0072940:intron | 50.0% | |
CACACTCCTTCTCCAAGATG+AGG | - | chr1_2:46084601-46084620 | Msa0072940:CDS | 50.0% | |
! | GTCTGCGTAACGTTTGGGAT+TGG | + | chr1_2:46085873-46085892 | None:intergenic | 50.0% |
! | TCGGTGTCTGCGTAACGTTT+GGG | + | chr1_2:46085878-46085897 | None:intergenic | 50.0% |
! | ATCGGTGTCTGCGTAACGTT+TGG | + | chr1_2:46085879-46085898 | None:intergenic | 50.0% |
ACGGGTGAATCAGGCCAATG+AGG | + | chr1_2:46082646-46082665 | None:intergenic | 55.0% | |
! | TCATTGGCCTGATTCACCCG+TGG | - | chr1_2:46082645-46082664 | Msa0072940:intron | 55.0% |
!! | AGGTCAGGTTGAGGACATGG+TGG | + | chr1_2:46084442-46084461 | None:intergenic | 55.0% |
! | CCTAGGGTTAGGTCAGGTTG+AGG | + | chr1_2:46084451-46084470 | None:intergenic | 55.0% |
CCTCAACCTGACCTAACCCT+AGG | - | chr1_2:46084448-46084467 | Msa0072940:intron | 55.0% | |
!! | AGAATGAGGGGGCATCCCTA+GGG | + | chr1_2:46084467-46084486 | None:intergenic | 55.0% |
GGCATCCCTAGGGTTAGGTC+AGG | + | chr1_2:46084457-46084476 | None:intergenic | 60.0% | |
!! | CAGAATGAGGGGGCATCCCT+AGG | + | chr1_2:46084468-46084487 | None:intergenic | 60.0% |
!! | GAGGGGGCATCCCTAGGGTT+AGG | + | chr1_2:46084462-46084481 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_2 | gene | 46081208 | 46085994 | 46081208 | ID=Msa0072940;Name=Msa0072940 |
chr1_2 | mRNA | 46081208 | 46085994 | 46081208 | ID=Msa0072940-mRNA-1;Parent=Msa0072940;Name=Msa0072940-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0|0|1|0.75|0.8|5|0|335 |
chr1_2 | exon | 46085755 | 46085994 | 46085755 | ID=Msa0072940-mRNA-1:exon:14005;Parent=Msa0072940-mRNA-1 |
chr1_2 | exon | 46084528 | 46084775 | 46084528 | ID=Msa0072940-mRNA-1:exon:14004;Parent=Msa0072940-mRNA-1 |
chr1_2 | exon | 46082757 | 46082926 | 46082757 | ID=Msa0072940-mRNA-1:exon:14003;Parent=Msa0072940-mRNA-1 |
chr1_2 | exon | 46082487 | 46082572 | 46082487 | ID=Msa0072940-mRNA-1:exon:14002;Parent=Msa0072940-mRNA-1 |
chr1_2 | exon | 46081208 | 46081471 | 46081208 | ID=Msa0072940-mRNA-1:exon:14001;Parent=Msa0072940-mRNA-1 |
chr1_2 | CDS | 46085755 | 46085994 | 46085755 | ID=Msa0072940-mRNA-1:cds;Parent=Msa0072940-mRNA-1 |
chr1_2 | CDS | 46084528 | 46084775 | 46084528 | ID=Msa0072940-mRNA-1:cds;Parent=Msa0072940-mRNA-1 |
chr1_2 | CDS | 46082757 | 46082926 | 46082757 | ID=Msa0072940-mRNA-1:cds;Parent=Msa0072940-mRNA-1 |
chr1_2 | CDS | 46082487 | 46082572 | 46082487 | ID=Msa0072940-mRNA-1:cds;Parent=Msa0072940-mRNA-1 |
chr1_2 | CDS | 46081208 | 46081471 | 46081208 | ID=Msa0072940-mRNA-1:cds;Parent=Msa0072940-mRNA-1 |
Gene Sequence |
Protein sequence |