AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1223710

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1223710 MtrunA17_Chr2g0289341 86.731 309 39 2 1 308 1 308 0.0 550
Msa1223710 MtrunA17_Chr3g0121141 75.000 316 75 2 1 315 1 313 4.00e-180 499
Msa1223710 MtrunA17_Chr5g0439011 72.990 311 81 2 1 310 2 310 8.18e-173 481
Msa1223710 MtrunA17_Chr3g0125201 53.226 310 132 5 5 306 4 308 8.84e-108 316
Msa1223710 MtrunA17_Chr4g0075431 92.638 163 11 1 1 163 1 162 5.58e-99 289
Msa1223710 MtrunA17_Chr6g0488511 47.213 305 147 5 4 304 3 297 4.22e-98 291
Msa1223710 MtrunA17_Chr4g0075471 97.826 138 3 0 154 291 24 161 3.85e-97 283
Msa1223710 MtrunA17_Chr5g0437181 36.825 315 185 6 1 305 46 356 9.46e-67 213
Msa1223710 MtrunA17_Chr3g0113641 36.218 312 185 6 4 305 50 357 1.94e-63 204
Msa1223710 MtrunA17_Chr7g0242551 35.669 314 185 6 4 305 54 362 4.91e-61 198
Msa1223710 MtrunA17_Chr8g0375571 36.559 279 158 5 3 268 44 316 6.19e-61 198
Msa1223710 MtrunA17_Chr4g0006371 34.628 309 189 5 5 303 63 368 9.39e-60 195
Msa1223710 MtrunA17_Chr8g0375671 33.987 306 183 7 3 296 51 349 7.55e-58 190
Msa1223710 MtrunA17_Chr8g0375601 33.770 305 188 6 1 296 45 344 6.09e-57 188
Msa1223710 MtrunA17_Chr3g0109041 37.542 301 166 10 4 288 42 336 1.60e-56 186
Msa1223710 MtrunA17_Chr3g0128001 33.447 293 176 7 1 284 35 317 1.12e-53 178
Msa1223710 MtrunA17_Chr8g0345831 33.893 298 168 7 2 284 40 323 1.84e-53 178
Msa1223710 MtrunA17_Chr8g0365241 30.164 305 197 5 1 296 54 351 2.69e-53 178
Msa1223710 MtrunA17_Chr5g0423191 31.908 304 192 6 1 296 44 340 6.33e-53 177
Msa1223710 MtrunA17_Chr2g0314381 32.013 303 191 7 3 296 76 372 9.37e-53 177
Msa1223710 MtrunA17_Chr5g0420951 30.492 305 194 6 2 296 51 347 3.15e-52 175
Msa1223710 MtrunA17_Chr2g0314401 34.307 274 169 5 3 268 50 320 5.00e-52 174
Msa1223710 MtrunA17_Chr5g0421041 31.561 301 193 6 3 296 44 338 2.94e-51 172
Msa1223710 MtrunA17_Chr5g0420981 29.180 305 200 5 1 296 50 347 4.69e-51 172
Msa1223710 MtrunA17_Chr1g0162191 34.672 274 168 6 1 266 44 314 9.67e-51 171
Msa1223710 MtrunA17_Chr5g0421011 30.592 304 196 6 1 296 44 340 7.49e-50 169
Msa1223710 MtrunA17_Chr5g0412681 34.343 297 170 8 2 286 31 314 2.73e-49 167
Msa1223710 MtrunA17_Chr2g0296371 33.439 314 173 8 4 296 50 348 8.75e-49 166
Msa1223710 MtrunA17_Chr5g0423251 30.363 303 198 5 1 296 44 340 1.32e-48 166
Msa1223710 MtrunA17_Chr5g0420941 30.164 305 196 7 1 296 42 338 6.32e-48 164
Msa1223710 MtrunA17_Chr2g0314391 31.900 279 169 5 3 268 69 339 1.55e-47 164
Msa1223710 MtrunA17_Chr1g0184101 34.686 271 160 6 5 265 39 302 3.54e-47 162
Msa1223710 MtrunA17_Chr5g0423201 29.667 300 197 5 5 296 48 341 4.20e-47 162
Msa1223710 MtrunA17_Chr7g0239111 32.566 304 186 7 3 296 54 348 6.66e-47 161
Msa1223710 MtrunA17_Chr4g0064781 33.456 272 169 4 4 268 50 316 1.03e-46 160
Msa1223710 MtrunA17_Chr5g0412671 34.409 279 166 7 1 266 35 309 1.45e-46 160
Msa1223710 MtrunA17_Chr5g0420901 32.000 275 172 6 1 266 43 311 1.51e-46 160
Msa1223710 MtrunA17_Chr7g0239101 31.715 309 182 8 3 296 54 348 3.06e-46 160
Msa1223710 MtrunA17_Chr3g0145171 32.258 310 193 9 4 304 52 353 4.26e-46 159
Msa1223710 MtrunA17_Chr5g0423221 31.317 281 167 5 1 266 68 337 4.70e-46 160
Msa1223710 MtrunA17_Chr8g0370711 32.895 304 186 9 5 298 53 348 6.71e-46 159
Msa1223710 MtrunA17_Chr7g0220001 32.907 313 182 11 1 302 38 333 1.26e-45 157
Msa1223710 MtrunA17_Chr1g0184161 31.864 295 180 7 5 288 39 323 1.59e-45 157
Msa1223710 MtrunA17_Chr5g0412651 34.276 283 165 7 1 268 35 311 2.85e-45 157
Msa1223710 MtrunA17_Chr8g0336751 34.657 277 160 8 5 268 95 363 2.99e-45 158
Msa1223710 MtrunA17_Chr2g0311761 33.574 277 164 6 5 268 69 338 4.91e-45 157
Msa1223710 MtrunA17_Chr5g0421101 29.304 273 182 4 1 266 44 312 7.01e-45 156
Msa1223710 MtrunA17_Chr8g0375701 32.609 276 168 5 1 266 52 319 1.34e-44 155
Msa1223710 MtrunA17_Chr2g0311681 31.962 316 182 12 4 298 63 366 1.58e-44 155
Msa1223710 MtrunA17_Chr2g0311921 33.852 257 155 6 5 252 55 305 2.48e-44 155
Msa1223710 MtrunA17_Chr7g0239121 31.148 305 190 8 3 296 50 345 3.07e-44 154
Msa1223710 MtrunA17_Chr5g0398291 33.692 279 171 5 3 268 46 323 4.23e-44 154
Msa1223710 MtrunA17_Chr5g0426891 30.612 294 191 8 2 287 37 325 4.36e-44 154
Msa1223710 MtrunA17_Chr1g0187831 30.640 297 184 10 5 288 71 358 4.79e-44 155
Msa1223710 MtrunA17_Chr7g0220011 31.544 298 181 10 2 288 37 322 6.46e-44 153
Msa1223710 MtrunA17_Chr1g0187811 32.847 274 169 8 5 269 189 456 8.48e-44 156
Msa1223710 MtrunA17_Chr8g0375681 32.714 269 167 6 36 296 15 277 1.40e-43 151
Msa1223710 MtrunA17_Chr8g0336851 31.907 257 160 5 5 252 61 311 1.41e-43 153
Msa1223710 MtrunA17_Chr5g0421091 27.575 301 206 6 3 296 44 339 1.64e-43 152
Msa1223710 MtrunA17_Chr4g0066121 34.221 263 155 7 4 255 60 315 2.56e-43 152
Msa1223710 MtrunA17_Chr2g0319491 32.414 290 172 9 3 284 32 305 2.69e-43 151
Msa1223710 MtrunA17_Chr1g0167911 33.550 307 186 8 5 301 55 353 2.71e-43 152
Msa1223710 MtrunA17_Chr2g0311831 33.333 294 173 10 5 285 69 352 4.21e-43 152
Msa1223710 MtrunA17_Chr8g0348081 31.939 263 160 6 4 255 60 314 4.71e-43 151
Msa1223710 MtrunA17_Chr1g0179801 30.903 288 160 7 3 266 65 337 5.72e-43 152
Msa1223710 MtrunA17_Chr1g0162361 34.028 288 163 8 1 268 24 304 9.45e-43 150
Msa1223710 MtrunA17_Chr1g0184121 32.727 275 167 7 5 268 38 305 1.37e-42 150
Msa1223710 MtrunA17_Chr2g0311691 31.329 316 184 12 4 298 63 366 3.55e-42 149
Msa1223710 MtrunA17_Chr1g0184111 30.169 295 186 8 5 288 38 323 4.84e-42 148
Msa1223710 MtrunA17_Chr2g0311861 35.274 292 158 12 4 288 64 331 6.45e-42 148
Msa1223710 MtrunA17_Chr6g0455481 32.143 308 187 8 6 303 41 336 7.48e-42 147
Msa1223710 MtrunA17_Chr7g0239821 29.154 319 204 7 3 310 63 370 8.23e-42 148
Msa1223710 MtrunA17_Chr2g0311711 32.246 276 169 7 5 268 68 337 1.24e-41 148
Msa1223710 MtrunA17_Chr4g0050031 32.095 296 185 7 2 287 60 349 2.03e-41 147
Msa1223710 MtrunA17_Chr1g0187821 31.769 277 168 9 5 268 68 336 2.16e-41 147
Msa1223710 MtrunA17_Chr2g0311701 30.421 309 178 10 5 293 70 361 2.31e-41 147
Msa1223710 MtrunA17_Chr8g0336761 32.090 268 149 6 5 254 61 313 4.27e-41 146
Msa1223710 MtrunA17_Chr8g0336781 31.538 260 164 5 4 254 95 349 5.44e-41 147
Msa1223710 MtrunA17_Chr5g0405411 33.456 272 162 9 3 261 38 303 6.49e-41 145
Msa1223710 MtrunA17_Chr8g0370721 32.609 276 172 8 3 268 51 322 6.77e-41 145
Msa1223710 MtrunA17_Chr8g0371931 32.593 270 167 7 3 261 38 303 6.78e-41 145
Msa1223710 MtrunA17_Chr1g0184151 32.491 277 164 8 5 268 39 305 7.77e-41 145
Msa1223710 MtrunA17_Chr3g0087031 31.879 298 186 9 5 293 61 350 8.02e-41 145
Msa1223710 MtrunA17_Chr2g0311741 30.824 279 170 7 3 268 26 294 1.36e-40 144
Msa1223710 MtrunA17_Chr7g0265221 28.966 290 173 5 3 268 66 346 2.51e-40 145
Msa1223710 MtrunA17_Chr4g0045471 32.881 295 165 9 2 268 24 313 2.97e-40 144
Msa1223710 MtrunA17_Chr8g0336861 31.698 265 157 8 4 254 60 314 4.02e-40 144
Msa1223710 MtrunA17_Chr4g0045411 30.796 289 173 8 2 268 28 311 1.17e-39 142
Msa1223710 MtrunA17_Chr7g0266651 33.585 265 146 9 4 252 59 309 1.22e-39 142
Msa1223710 MtrunA17_Chr5g0423211 27.036 307 205 8 1 296 44 342 1.66e-39 142
Msa1223710 MtrunA17_Chr8g0371921 31.481 270 170 7 3 261 38 303 1.69e-39 142
Msa1223710 MtrunA17_Chr7g0239071 31.560 282 179 5 23 296 18 293 2.36e-39 140
Msa1223710 MtrunA17_Chr1g0167951 33.984 256 154 6 5 252 54 302 3.11e-39 141
Msa1223710 MtrunA17_Chr6g0474391 30.169 295 181 8 5 281 65 352 3.13e-39 142
Msa1223710 MtrunA17_Chr1g0162351 30.088 339 194 11 2 312 67 390 3.58e-39 142
Msa1223710 MtrunA17_Chr4g0045441 31.338 284 171 7 5 268 33 312 4.88e-39 140
Msa1223710 MtrunA17_Chr1g0167961 34.109 258 154 7 4 252 69 319 8.55e-39 140
Msa1223710 MtrunA17_Chr8g0336631 32.197 264 155 8 5 254 61 314 1.11e-38 140
Msa1223710 MtrunA17_Chr3g0145181 28.881 277 178 7 6 268 51 322 1.25e-38 139
Msa1223710 MtrunA17_Chr5g0420721 31.950 241 156 4 58 296 8 242 1.25e-38 137
Msa1223710 MtrunA17_Chr2g0332191 30.292 274 170 7 5 266 53 317 3.29e-38 139
Msa1223710 MtrunA17_Chr1g0162321 29.794 339 195 11 2 312 67 390 3.48e-38 139
Msa1223710 MtrunA17_Chr4g0045451 31.250 288 168 8 5 266 27 310 6.06e-38 137
Msa1223710 MtrunA17_Chr8g0354261 32.374 278 166 9 4 266 68 338 8.87e-38 138
Msa1223710 MtrunA17_Chr3g0126741 31.884 276 169 7 3 266 58 326 1.18e-37 137
Msa1223710 MtrunA17_Chr7g0250511 30.769 299 179 9 4 287 49 334 1.26e-37 137
Msa1223710 MtrunA17_Chr8g0354241 32.971 276 165 7 5 266 69 338 1.40e-37 137
Msa1223710 MtrunA17_Chr5g0424201 32.877 292 176 9 5 285 45 327 2.25e-37 135
Msa1223710 MtrunA17_Chr7g0232161 33.471 242 146 5 3 235 59 294 2.51e-37 135
Msa1223710 MtrunA17_Chr7g0235951 27.852 298 193 9 5 288 68 357 3.94e-37 136
Msa1223710 MtrunA17_Chr3g0105281 30.000 270 164 5 2 259 32 288 1.12e-36 134
Msa1223710 MtrunA17_Chr8g0364471 27.090 299 194 9 5 288 68 357 1.43e-36 134
Msa1223710 MtrunA17_Chr3g0114861 31.295 278 173 6 24 287 56 329 2.26e-36 133
Msa1223710 MtrunA17_Chr3g0145201 28.881 277 178 7 6 268 686 957 7.92e-36 137
Msa1223710 MtrunA17_Chr3g0102041 31.579 247 156 6 24 261 61 303 8.28e-36 132
Msa1223710 MtrunA17_Chr5g0424211 31.769 277 169 7 5 268 43 312 1.30e-35 131
Msa1223710 MtrunA17_Chr3g0125421 30.921 304 179 12 5 287 37 330 3.35e-35 130
Msa1223710 MtrunA17_Chr7g0225881 32.308 260 152 9 5 252 68 315 3.99e-35 130
Msa1223710 MtrunA17_Chr8g0384481 28.571 280 180 9 3 267 58 332 4.84e-35 130
Msa1223710 MtrunA17_Chr3g0092531 29.520 271 182 6 20 287 26 290 5.64e-35 129
Msa1223710 MtrunA17_Chr3g0130391 28.041 296 190 9 3 281 65 354 8.26e-35 130
Msa1223710 MtrunA17_Chr2g0314371 28.674 279 162 7 3 250 51 323 1.16e-34 129
Msa1223710 MtrunA17_Chr2g0285931 29.470 302 186 11 1 286 25 315 1.73e-34 128
Msa1223710 MtrunA17_Chr8g0384461 28.094 299 192 10 5 287 48 339 2.00e-34 129
Msa1223710 MtrunA17_Chr6g0472861 31.298 262 154 9 4 251 70 319 2.62e-34 129
Msa1223710 MtrunA17_Chr1g0167931 32.271 251 129 6 4 252 54 265 2.73e-34 127
Msa1223710 MtrunA17_Chr4g0055591 28.571 259 160 7 4 251 61 305 3.49e-34 128
Msa1223710 MtrunA17_Chr1g0184241 30.682 264 169 5 5 261 70 326 5.47e-34 127
Msa1223710 MtrunA17_Chr1g0161041 32.841 271 142 9 5 255 97 347 5.49e-34 128
Msa1223710 MtrunA17_Chr8g0335411 32.734 278 165 10 5 269 68 336 5.60e-34 127
Msa1223710 MtrunA17_Chr7g0247991 31.429 280 168 11 5 268 68 339 8.37e-34 127
Msa1223710 MtrunA17_Chr8g0351101 26.498 317 210 10 3 303 53 362 1.07e-33 127
Msa1223710 MtrunA17_Chr1g0204181 26.578 301 184 7 5 281 60 347 2.29e-33 126
Msa1223710 MtrunA17_Chr1g0148771 28.839 267 174 7 5 264 64 321 6.13e-33 124
Msa1223710 MtrunA17_Chr4g0066991 29.452 292 176 8 5 288 68 337 8.94e-33 124
Msa1223710 MtrunA17_Chr2g0311631 28.205 312 194 9 4 297 55 354 1.25e-32 124
Msa1223710 MtrunA17_Chr7g0265351 28.431 306 179 10 2 288 37 321 1.79e-32 123
Msa1223710 MtrunA17_Chr1g0191201 27.000 300 196 10 5 287 54 347 5.27e-32 122
Msa1223710 MtrunA17_Chr5g0394071 37.931 174 94 5 114 286 5 165 7.10e-32 117
Msa1223710 MtrunA17_Chr2g0313111 28.947 304 183 9 5 293 29 314 1.26e-31 120
Msa1223710 MtrunA17_Chr1g0161111 32.353 272 146 9 3 255 131 383 2.72e-31 121
Msa1223710 MtrunA17_Chr7g0236011 29.043 303 183 10 5 288 68 357 7.11e-31 119
Msa1223710 MtrunA17_Chr4g0045431 27.778 270 171 7 19 268 47 312 1.45e-30 118
Msa1223710 MtrunA17_Chr1g0161081 29.412 306 175 11 3 288 72 356 1.88e-30 118
Msa1223710 MtrunA17_Chr7g0239091 25.902 305 214 7 4 307 160 453 2.76e-30 119
Msa1223710 MtrunA17_Chr3g0093751 27.907 301 187 8 2 288 54 338 2.88e-30 117
Msa1223710 MtrunA17_Chr8g0358941 28.076 317 201 10 5 304 28 334 3.41e-30 117
Msa1223710 MtrunA17_Chr3g0093741 28.525 305 180 11 2 288 54 338 3.43e-30 117
Msa1223710 MtrunA17_Chr7g0235981 32.114 246 146 8 35 269 55 290 5.77e-30 116
Msa1223710 MtrunA17_Chr3g0114871 34.568 243 140 9 5 238 43 275 1.49e-29 114
Msa1223710 MtrunA17_Chr8g0348951 29.677 310 173 12 4 287 5 295 1.84e-29 114
Msa1223710 MtrunA17_Chr5g0420881 36.765 136 84 1 162 297 4 137 1.93e-29 110
Msa1223710 MtrunA17_Chr4g0011311 28.390 236 145 7 1 223 64 288 3.16e-29 113
Msa1223710 MtrunA17_Chr3g0093761 27.907 301 186 10 2 288 54 337 3.20e-29 114
Msa1223710 MtrunA17_Chr4g0064771 32.386 176 111 2 104 279 19 186 1.52e-28 109
Msa1223710 MtrunA17_Chr4g0045461 29.682 283 176 6 5 268 33 311 1.77e-28 112
Msa1223710 MtrunA17_Chr3g0126761 34.911 169 108 2 100 268 33 199 3.66e-27 106
Msa1223710 MtrunA17_Chr4g0068891 27.907 301 196 8 4 293 20 310 3.93e-27 108
Msa1223710 MtrunA17_Chr7g0233661 43.182 132 70 3 158 287 20 148 4.52e-27 103
Msa1223710 MtrunA17_Chr7g0247741 29.966 297 181 12 5 287 12 295 5.18e-26 105
Msa1223710 MtrunA17_Chr1g0158011 34.518 197 114 7 97 290 63 247 1.87e-25 102
Msa1223710 MtrunA17_Chr5g0407781 26.073 303 202 9 2 297 3 290 3.24e-25 102
Msa1223710 MtrunA17_Chr1g0194321 27.358 318 188 12 4 293 20 322 3.87e-25 103
Msa1223710 MtrunA17_Chr8g0336801 43.617 94 52 1 162 255 14 106 1.25e-24 97.4
Msa1223710 MtrunA17_Chr6g0486831 27.760 317 183 11 3 285 17 321 5.12e-24 100
Msa1223710 MtrunA17_Chr4g0037611 36.196 163 91 5 123 284 3 153 5.27e-24 96.7
Msa1223710 MtrunA17_Chr1g0170631 31.868 182 113 5 111 289 3 176 6.72e-23 94.0
Msa1223710 MtrunA17_Chr4g0052251 26.449 276 185 8 23 284 42 313 8.97e-23 96.7
Msa1223710 MtrunA17_Chr8g0389941 29.225 284 160 12 6 259 36 308 1.02e-22 96.7
Msa1223710 MtrunA17_Chr8g0362741 26.923 234 136 7 1 223 64 273 2.45e-22 94.4
Msa1223710 MtrunA17_Chr4g0055911 28.049 328 186 12 4 296 9 321 3.14e-22 95.1
Msa1223710 MtrunA17_Chr4g0053251 27.092 251 165 7 27 261 41 289 4.69e-22 94.4
Msa1223710 MtrunA17_Chr8g0336871 38.931 131 70 3 124 254 3 123 2.85e-21 89.0
Msa1223710 MtrunA17_Chr2g0319521 34.783 115 71 2 109 223 14 124 3.68e-21 87.8
Msa1223710 MtrunA17_Chr3g0092581 29.341 167 113 4 121 287 1 162 6.00e-21 88.6
Msa1223710 MtrunA17_Chr4g0004071 27.046 281 182 7 2 268 7 278 1.82e-20 89.7
Msa1223710 MtrunA17_Chr4g0004061 26.690 281 182 8 3 268 8 279 1.92e-19 87.0
Msa1223710 MtrunA17_Chr4g0055871 26.545 275 160 8 11 259 13 271 2.01e-19 87.0
Msa1223710 MtrunA17_Chr5g0407731 24.830 294 193 10 4 287 33 308 2.24e-18 84.3
Msa1223710 MtrunA17_Chr1g0158031 33.962 159 95 6 121 275 1 153 5.86e-18 80.1
Msa1223710 MtrunA17_Chr1g0158021 28.829 222 143 8 2 215 47 261 1.76e-17 80.5
Msa1223710 MtrunA17_Chr8g0364171 33.913 115 68 3 111 223 18 126 2.67e-17 77.4
Msa1223710 MtrunA17_Chr2g0293931 29.319 191 119 6 110 293 13 194 5.85e-17 78.2
Msa1223710 MtrunA17_Chr8g0375581 45.312 64 35 0 156 219 22 85 1.10e-16 73.9
Msa1223710 MtrunA17_Chr1g0167921 34.862 109 67 2 114 222 52 156 6.59e-15 71.6
Msa1223710 MtrunA17_Chr4g0009561 27.273 220 136 7 95 294 93 308 8.38e-15 73.9
Msa1223710 MtrunA17_Chr8g0336831 26.738 187 124 5 5 182 61 243 2.35e-14 71.6
Msa1223710 MtrunA17_Chr3g0138351 26.519 181 127 5 110 288 125 301 7.05e-14 71.2
Msa1223710 MtrunA17_Chr1g0161101 41.053 95 45 3 162 255 409 493 7.27e-14 72.0
Msa1223710 MtrunA17_Chr2g0311611 43.478 69 31 2 162 223 4 71 8.17e-14 65.5
Msa1223710 MtrunA17_Chr7g0219991 36.190 105 63 1 114 218 251 351 2.59e-13 69.7
Msa1223710 MtrunA17_Chr8g0375661 33.981 103 60 2 3 97 51 153 4.13e-12 63.5
Msa1223710 MtrunA17_Chr8g0375641 34.615 104 58 3 3 97 51 153 5.28e-12 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1223710 AT1G05010.1 70.898 323 86 3 1 315 1 323 4.52e-173 482
Msa1223710 AT1G12010.1 71.895 306 82 1 3 308 6 307 7.62e-171 477
Msa1223710 AT1G62380.1 70.382 314 88 2 3 315 6 315 6.65e-169 472
Msa1223710 AT1G77330.1 52.077 313 130 6 5 306 4 307 1.33e-105 311
Msa1223710 AT2G19590.1 47.059 306 149 4 3 306 10 304 2.32e-105 310
Msa1223710 AT2G19590.2 48.000 275 130 4 34 306 26 289 8.62e-94 280
Msa1223710 AT5G24530.1 35.135 296 174 7 1 286 35 322 3.18e-58 191
Msa1223710 AT5G05600.1 36.486 296 163 8 5 284 63 349 6.26e-58 191
Msa1223710 AT2G38240.1 33.673 294 180 5 3 287 47 334 6.39e-56 185
Msa1223710 AT3G11180.1 35.739 291 170 6 4 284 95 378 2.33e-55 185
Msa1223710 AT3G11180.2 35.739 291 170 6 4 284 95 378 3.17e-55 185
Msa1223710 AT4G16330.2 36.364 297 165 9 3 286 66 351 1.23e-54 182
Msa1223710 AT1G78550.1 34.926 272 166 6 3 266 52 320 7.42e-54 180
Msa1223710 AT4G10490.1 32.781 302 192 5 2 296 40 337 8.61e-54 179
Msa1223710 AT3G55970.1 33.898 295 182 6 4 287 52 344 1.48e-53 179
Msa1223710 AT4G10500.1 33.103 290 182 6 2 284 42 326 3.85e-53 178
Msa1223710 AT1G17020.1 33.692 279 176 4 3 273 52 329 1.42e-50 171
Msa1223710 AT1G17010.1 33.091 275 174 4 1 267 51 323 6.49e-50 170
Msa1223710 AT4G25310.1 35.484 248 148 4 27 267 76 318 4.82e-47 162
Msa1223710 AT4G21200.1 36.226 265 152 9 3 259 41 296 1.60e-46 160
Msa1223710 AT4G25300.1 31.868 273 176 4 3 267 51 321 3.23e-46 160
Msa1223710 AT1G06620.1 33.333 306 181 8 3 295 61 356 4.60e-46 160
Msa1223710 AT1G78550.2 34.440 241 148 5 33 266 5 242 8.92e-46 157
Msa1223710 AT5G08640.2 32.877 292 176 7 4 284 43 325 1.20e-45 158
Msa1223710 AT5G08640.1 32.877 292 176 7 4 284 43 325 1.20e-45 158
Msa1223710 AT5G20400.1 30.744 309 189 7 4 298 45 342 2.37e-45 157
Msa1223710 AT3G21420.1 33.550 307 187 9 3 297 54 355 3.91e-44 155
Msa1223710 AT1G55290.1 31.544 298 181 9 2 288 60 345 2.02e-43 152
Msa1223710 AT3G19010.1 34.965 286 161 7 2 266 26 307 2.43e-43 152
Msa1223710 AT3G19010.4 34.965 286 161 7 2 266 26 307 2.43e-43 152
Msa1223710 AT5G59530.1 32.746 284 163 8 3 268 57 330 3.89e-43 152
Msa1223710 AT4G16330.1 40.976 205 114 5 84 286 46 245 6.77e-43 149
Msa1223710 AT5G43450.1 32.616 279 161 8 5 268 62 328 3.15e-42 149
Msa1223710 AT5G59540.1 32.333 300 176 10 3 282 60 352 4.32e-42 149
Msa1223710 AT1G49390.1 31.136 273 177 4 5 268 46 316 4.59e-42 149
Msa1223710 AT4G22880.1 32.342 269 169 4 3 259 46 313 6.62e-42 149
Msa1223710 AT4G22880.2 32.342 269 169 4 3 259 46 313 6.62e-42 149
Msa1223710 AT4G22880.3 32.342 269 169 4 3 259 46 313 6.62e-42 149
Msa1223710 AT3G13610.1 31.104 299 181 9 2 288 60 345 9.59e-42 148
Msa1223710 AT1G03410.2 33.692 279 164 10 4 268 57 328 1.43e-41 148
Msa1223710 AT3G51240.1 33.210 271 166 7 2 261 36 302 1.47e-41 148
Msa1223710 AT1G03410.1 33.692 279 164 10 4 268 94 365 2.13e-41 148
Msa1223710 AT3G61400.1 36.434 258 145 9 6 252 69 318 5.20e-41 147
Msa1223710 AT2G36690.2 30.961 281 164 7 3 266 60 327 5.84e-41 146
Msa1223710 AT2G36690.1 30.961 281 164 7 3 266 60 327 5.84e-41 146
Msa1223710 AT3G12900.1 31.148 305 182 10 7 297 59 349 6.21e-41 146
Msa1223710 AT5G05600.2 35.169 236 130 7 4 223 62 290 1.26e-40 144
Msa1223710 AT5G20550.1 32.491 277 171 7 4 268 45 317 1.29e-40 145
Msa1223710 AT5G54000.2 30.545 275 180 6 3 268 45 317 1.92e-40 144
Msa1223710 AT2G30830.1 33.696 276 163 9 13 279 66 330 6.58e-40 143
Msa1223710 AT1G06650.2 32.168 286 165 10 1 268 61 335 1.53e-39 142
Msa1223710 AT3G19000.1 33.564 289 166 8 2 268 30 314 2.04e-39 142
Msa1223710 AT5G63595.1 33.091 275 151 9 2 266 23 274 2.45e-39 140
Msa1223710 AT5G43440.1 31.752 274 172 7 5 268 63 331 3.73e-39 141
Msa1223710 AT3G55970.2 32.900 231 144 4 4 223 52 282 4.25e-39 140
Msa1223710 AT1G80340.1 27.723 303 189 8 2 289 48 335 5.23e-39 140
Msa1223710 AT4G25420.1 29.236 301 187 9 5 287 62 354 5.65e-39 141
Msa1223710 AT1G04350.1 34.420 276 161 11 5 268 59 326 7.61e-39 140
Msa1223710 AT1G49390.2 33.054 239 151 3 37 268 1 237 8.96e-39 138
Msa1223710 AT2G30840.1 32.302 291 167 10 5 279 58 334 2.83e-38 139
Msa1223710 AT1G06640.1 30.693 303 189 9 1 290 61 355 2.84e-38 139
Msa1223710 AT1G04380.1 31.757 296 178 10 5 288 46 329 4.67e-38 138
Msa1223710 AT5G63590.1 33.559 295 171 10 4 284 14 297 8.77e-38 136
Msa1223710 AT5G54000.1 32.636 239 152 5 37 268 1 237 1.86e-37 134
Msa1223710 AT1G15550.1 28.333 300 191 8 2 289 55 342 1.98e-37 137
Msa1223710 AT1G03400.1 34.766 256 148 8 4 252 56 299 1.07e-36 135
Msa1223710 AT3G19010.3 32.168 286 139 7 2 266 26 277 2.27e-36 133
Msa1223710 AT5G07200.1 27.243 301 197 5 5 287 59 355 4.54e-36 134
Msa1223710 AT1G60980.1 27.393 303 191 7 5 287 58 351 1.49e-35 132
Msa1223710 AT2G25450.1 31.541 279 172 9 5 270 56 328 3.17e-35 131
Msa1223710 AT1G80330.1 28.302 318 202 10 2 306 47 351 7.03e-35 130
Msa1223710 AT1G06645.1 30.961 281 172 8 1 268 74 345 1.30e-34 130
Msa1223710 AT1G78440.1 29.054 296 182 11 5 284 19 302 3.56e-34 127
Msa1223710 AT2G30840.3 31.615 291 163 11 5 279 58 328 3.72e-34 128
Msa1223710 AT5G51810.1 27.597 308 195 8 2 287 51 352 8.34e-34 127
Msa1223710 AT1G06620.2 33.333 231 136 6 3 223 61 283 1.76e-33 124
Msa1223710 AT5G63600.1 31.379 290 177 10 5 285 34 310 3.90e-33 125
Msa1223710 AT1G50960.1 28.295 258 173 5 3 253 39 291 4.27e-33 125
Msa1223710 AT5G43450.2 32.599 227 129 7 5 219 62 276 5.53e-33 123
Msa1223710 AT3G19010.2 34.146 246 137 7 2 226 26 267 6.87e-33 123
Msa1223710 AT3G61400.2 35.965 228 128 8 6 223 69 288 1.66e-32 122
Msa1223710 AT2G44800.1 28.383 303 193 11 4 293 52 343 1.82e-32 124
Msa1223710 AT3G19000.2 31.746 252 146 8 2 231 30 277 2.24e-32 121
Msa1223710 AT5G63600.2 31.615 291 176 11 5 285 34 311 2.52e-32 122
Msa1223710 AT4G25310.2 30.645 248 132 4 27 267 76 290 3.24e-32 122
Msa1223710 AT3G60290.1 30.169 295 182 11 4 285 52 335 4.81e-32 122
Msa1223710 AT3G51240.2 38.122 181 104 4 85 261 42 218 4.93e-32 120
Msa1223710 AT1G03400.2 32.155 283 145 9 5 252 57 327 3.23e-31 120
Msa1223710 AT4G25300.2 33.962 159 103 1 110 268 72 228 8.02e-31 117
Msa1223710 AT5G07480.1 28.428 299 187 11 5 285 45 334 9.79e-31 119
Msa1223710 AT1G30040.1 29.720 286 181 13 12 284 34 312 4.61e-30 117
Msa1223710 AT1G06650.1 30.932 236 138 8 1 222 61 285 1.42e-29 115
Msa1223710 AT1G06640.2 29.832 238 152 6 1 229 61 292 1.46e-29 115
Msa1223710 AT2G30840.2 31.579 228 140 6 5 222 58 279 4.07e-29 113
Msa1223710 AT1G06640.3 30.702 228 143 6 1 219 61 282 6.41e-29 112
Msa1223710 AT4G23340.1 30.882 272 170 10 27 287 30 294 1.20e-28 112
Msa1223710 AT5G59540.2 30.603 232 143 8 3 223 60 284 1.84e-28 111
Msa1223710 AT5G43440.2 30.631 222 142 6 5 219 63 279 2.89e-28 111
Msa1223710 AT1G44090.1 27.000 300 198 8 4 287 63 357 5.41e-28 112
Msa1223710 AT3G47190.1 30.037 273 160 8 5 258 33 293 6.98e-28 110
Msa1223710 AT1G04380.2 30.396 227 141 7 5 223 46 263 3.77e-27 107
Msa1223710 AT1G47990.1 25.974 308 202 10 2 294 13 309 7.34e-27 107
Msa1223710 AT3G50210.4 27.922 308 183 11 1 277 5 304 1.04e-26 107
Msa1223710 AT3G50210.1 27.922 308 183 11 1 277 5 304 1.04e-26 107
Msa1223710 AT3G50210.3 27.922 308 183 11 1 277 5 304 1.04e-26 107
Msa1223710 AT4G21690.1 25.574 305 194 12 4 289 47 337 2.55e-26 107
Msa1223710 AT5G43935.1 28.956 297 168 11 2 285 17 283 3.15e-26 105
Msa1223710 AT5G12270.1 28.296 311 190 10 5 297 57 352 8.12e-26 105
Msa1223710 AT2G34555.1 27.483 302 175 11 5 284 28 307 1.02e-25 105
Msa1223710 AT5G63580.2 31.224 237 131 8 4 223 19 240 5.51e-25 101
Msa1223710 AT5G63580.1 31.064 235 130 8 4 221 19 238 9.54e-25 100
Msa1223710 AT5G51310.1 27.303 304 194 11 3 287 4 299 1.55e-24 101
Msa1223710 AT3G49620.1 26.403 303 185 10 4 278 34 326 1.55e-24 102
Msa1223710 AT1G02400.1 28.391 317 202 14 4 306 24 329 2.30e-24 101
Msa1223710 AT5G07480.2 33.516 182 109 5 110 285 50 225 4.93e-24 98.6
Msa1223710 AT4G25420.2 28.692 237 145 8 5 223 62 292 1.24e-23 98.6
Msa1223710 AT3G49630.1 25.962 312 198 10 4 285 9 317 1.29e-23 99.4
Msa1223710 AT3G49630.3 26.073 303 198 9 6 285 14 313 1.55e-23 99.0
Msa1223710 AT5G51810.2 27.935 247 152 7 2 226 51 293 7.39e-22 94.0
Msa1223710 AT5G58660.1 24.390 287 177 7 4 259 34 311 2.18e-21 93.6
Msa1223710 AT1G14130.1 27.823 248 168 5 24 266 26 267 9.49e-21 90.9
Msa1223710 AT4G23340.2 32.044 181 111 7 114 287 1 176 3.77e-19 84.3
Msa1223710 AT1G14120.2 27.059 255 166 8 4 250 8 250 1.24e-18 85.1
Msa1223710 AT1G14120.1 27.059 255 166 8 4 250 8 250 1.24e-18 85.1
Msa1223710 AT1G14120.3 27.059 255 166 8 4 250 8 250 1.24e-18 85.1
Msa1223710 AT1G35190.1 27.458 295 170 9 1 259 1 287 2.49e-18 84.3
Msa1223710 AT1G35190.2 25.545 321 170 11 1 285 1 288 3.81e-18 83.6
Msa1223710 AT3G46490.1 25.839 298 153 10 6 259 19 292 1.00e-17 82.8
Msa1223710 AT3G50210.2 30.000 190 116 5 98 277 40 222 3.27e-17 80.1
Msa1223710 AT3G49630.2 27.919 197 133 5 97 285 49 244 5.01e-17 79.7
Msa1223710 AT3G46500.7 25.368 272 178 9 1 253 14 279 1.05e-15 76.6
Msa1223710 AT1G52820.1 25.263 285 180 9 3 268 11 281 1.29e-15 76.6
Msa1223710 AT3G46490.2 25.087 287 147 10 6 248 19 281 1.63e-14 73.2
Msa1223710 AT4G22870.1 42.647 68 39 0 192 259 2 69 6.38e-14 67.4
Msa1223710 AT4G03070.1 25.962 312 185 14 3 288 13 304 2.86e-13 69.7
Msa1223710 AT4G16765.6 27.660 188 116 7 110 286 59 237 3.60e-13 68.6
Msa1223710 AT4G16765.1 27.660 188 116 7 110 286 59 237 3.60e-13 68.6
Msa1223710 AT4G16765.2 27.660 188 116 7 110 286 59 237 3.60e-13 68.6
Msa1223710 AT4G16765.5 32.773 119 71 4 173 286 77 191 2.92e-12 65.1
Msa1223710 AT4G16765.3 28.916 166 108 6 110 268 59 221 3.38e-12 65.5
Msa1223710 AT1G02400.2 26.496 234 156 10 4 226 24 252 4.64e-12 65.5
Msa1223710 AT3G46480.1 39.362 94 50 3 171 259 154 245 5.49e-12 65.9

Find 89 sgRNAs with CRISPR-Local

Find 276 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAATCCATTGGCCATCTTTA+AGG 0.155824 8_1:-88311247 None:intergenic
GGATCCAAGGGACCAAATTT+TGG 0.175226 8_1:+88311101 Msa1223710:CDS
TAAAAGATGCTTGTGAAAAT+TGG 0.176549 8_1:+88310170 Msa1223710:CDS
CTAAGGTTTCTGAATGCTTT+TGG 0.208927 8_1:+88311812 Msa1223710:three_prime_UTR
CTAACTTTGGTTCCAAAATT+TGG 0.232333 8_1:-88311113 None:intergenic
AGCTTCAAATCTTGGCTCTT+TGG 0.245143 8_1:-88311701 None:intergenic
AAAAGATGCTTGTGAAAATT+GGG 0.298174 8_1:+88310171 Msa1223710:CDS
ATTAGTACTATACCTCAATT+TGG 0.306583 8_1:-88311313 None:intergenic
GACTTGCTGTGTGAGAATCT+TGG 0.323307 8_1:+88311044 Msa1223710:CDS
GCCTTCATAGCTTCAAATCT+TGG 0.334798 8_1:-88311709 None:intergenic
GGTTCCAAAATTTGGTCCCT+TGG 0.349046 8_1:-88311105 None:intergenic
TGCAGTGGAACTTGAGAAAC+TGG 0.361619 8_1:+88311007 Msa1223710:CDS
CAAATCTTGGCTCTTTGGCT+TGG 0.362611 8_1:-88311696 None:intergenic
GCTCTTTGGCTTGGAATTTG+AGG 0.371223 8_1:-88311687 None:intergenic
GTCCACCAACCTTGTCATCT+TGG 0.380130 8_1:-88311217 None:intergenic
ACTTGCTGTGTGAGAATCTT+GGG 0.390042 8_1:+88311045 Msa1223710:CDS
TGAAAATTGGGGTTTCTTTG+AGG 0.399932 8_1:+88310183 Msa1223710:CDS
CTGAGTCCTTTGATAAGATC+TGG 0.404368 8_1:-88311158 None:intergenic
CAGAAATCAATGACTTGGAT+TGG 0.409232 8_1:+88310686 Msa1223710:CDS
TATTTGAAGAAAGTCTTTCA+TGG 0.410538 8_1:+88311080 Msa1223710:CDS
TGGGATATCCGTAGAGTTGA+TGG 0.415782 8_1:+88310567 Msa1223710:CDS
ACATGCTTAGGCAGTTGGTA+TGG 0.424335 8_1:-88311749 None:intergenic
TCATCACATGCTTAGGCAGT+TGG 0.430982 8_1:-88311754 None:intergenic
GGAGCAAAGGTTCAAAGAAA+TGG 0.439953 8_1:+88310633 Msa1223710:CDS
AGATTCTTCATGTCAACTAC+TGG 0.442836 8_1:-88310112 None:intergenic
GGCAGTTGGTATGGGAATGT+TGG 0.451851 8_1:-88311740 None:intergenic
ATCTCTGATATGTTAGAGTT+AGG 0.452914 8_1:-88310736 None:intergenic
CACACTCTTGTATTTGCCAT+TGG 0.461320 8_1:-88311491 None:intergenic
AGAAATCAATGACTTGGATT+GGG 0.472666 8_1:+88310687 Msa1223710:CDS
AATCTCTCCTGCAGCAGCCT+TGG 0.474285 8_1:+88311591 Msa1223710:CDS
TATGGGAATGTTGGATTCCA+TGG 0.476603 8_1:-88311731 None:intergenic
TCCTTCACCAAGGCTGCTGC+AGG 0.479391 8_1:-88311598 None:intergenic
CATTCCATTGTTATCAACCT+TGG 0.482440 8_1:+88311287 Msa1223710:CDS
GAGAATCTTGGGCTAGAGAA+AGG 0.487980 8_1:+88311056 Msa1223710:CDS
AGGAGGGTAGTTGCTAACTT+TGG 0.492635 8_1:-88311126 None:intergenic
GAGATTACTGCATCATTGCC+TGG 0.493110 8_1:-88311574 None:intergenic
CAACCTTGGTGACCAAATTG+AGG 0.503779 8_1:+88311301 Msa1223710:CDS
CTCAGAGCCCACACAGATGC+TGG 0.508251 8_1:+88311176 Msa1223710:CDS
CCTTTGATAAGATCTGGCTT+AGG 0.514259 8_1:-88311152 None:intergenic
GCCAAGATTTGAAGCTATGA+AGG 0.524377 8_1:+88311708 Msa1223710:CDS
TTAAAACAGGTGATTACCAA+TGG 0.524820 8_1:+88311475 Msa1223710:intron
CATGCTTAGGCAGTTGGTAT+GGG 0.532498 8_1:-88311748 None:intergenic
TTGATCTTGATCATGACTAC+AGG 0.534190 8_1:+88310761 Msa1223710:CDS
TTCCAAGATGACAAGGTTGG+TGG 0.537071 8_1:+88311215 Msa1223710:CDS
CTATTCCAAGATGACAAGGT+TGG 0.537341 8_1:+88311212 Msa1223710:CDS
AACTTTGTCCATCAACTCTA+CGG 0.540219 8_1:-88310575 None:intergenic
TGTAGTCATGATCAAGATCA+AGG 0.541430 8_1:-88310759 None:intergenic
TCCTGCAGCAGCCTTGGTGA+AGG 0.544976 8_1:+88311597 Msa1223710:CDS
CTGATATGTTAGAGTTAGGA+AGG 0.547684 8_1:-88310732 None:intergenic
AGCTCCTTAAAGATGGCCAA+TGG 0.550067 8_1:+88311243 Msa1223710:CDS
ATTTGAAGCTATGAAGGCCA+TGG 0.550162 8_1:+88311714 Msa1223710:CDS
GTCTCTTTGATTGGTATCAG+CGG 0.550901 8_1:+88311834 Msa1223710:three_prime_UTR
GAAAGTCTTTCATGGATCCA+AGG 0.558321 8_1:+88311088 Msa1223710:CDS
TCAGTCAGAAATCAATGACT+TGG 0.558442 8_1:+88310681 Msa1223710:CDS
GATTACATGAAACTCTATGC+TGG 0.558834 8_1:+88311664 Msa1223710:CDS
TGGATTATAAAATGATGCTA+TGG 0.559145 8_1:-88311554 None:intergenic
GAATCTTAACACTGAAGAGA+AGG 0.559570 8_1:+88310129 Msa1223710:CDS
CTTCTGTTTGAGCAATTACA+CGG 0.563408 8_1:-88311519 None:intergenic
GGACTTCAGCTCCTTAAAGA+TGG 0.565268 8_1:+88311236 Msa1223710:CDS
ATAAGATCTGGCTTAGGACA+AGG 0.565790 8_1:-88311146 None:intergenic
AAAGAAATGGTAGCAAGCAA+AGG 0.566022 8_1:+88310646 Msa1223710:CDS
AAAGATGCTTGTGAAAATTG+GGG 0.567931 8_1:+88310172 Msa1223710:CDS
GTCACCAAGGTTGATAACAA+TGG 0.568643 8_1:-88311291 None:intergenic
TTGGTGGGACATCAATCCAT+TGG 0.570294 8_1:-88311259 None:intergenic
CGTGTAATTGCTCAAACAGA+AGG 0.571834 8_1:+88311520 Msa1223710:CDS
ACAATGGAATGACGCATTGG+TGG 0.574276 8_1:-88311275 None:intergenic
AGAATCTTGGGCTAGAGAAA+GGG 0.575627 8_1:+88311057 Msa1223710:CDS
AGAAAACTACAAGAAGCGTA+TGG 0.577170 8_1:+88310612 Msa1223710:CDS
ACAAGAAGCGTATGGAGCAA+AGG 0.585634 8_1:+88310620 Msa1223710:CDS
TTTATGCTACACATGCACAT+AGG 0.597145 8_1:-88311859 None:intergenic
CAATGGAATGACGCATTGGT+GGG 0.600451 8_1:-88311274 None:intergenic
CCTAAGCCAGATCTTATCAA+AGG 0.602471 8_1:+88311152 Msa1223710:CDS
AAAGTCTTTCATGGATCCAA+GGG 0.606069 8_1:+88311089 Msa1223710:CDS
TGATGAAGTTGGTGAACCAT+GGG 0.610190 8_1:+88310548 Msa1223710:intron
TTGATGAAGTTGGTGAACCA+TGG 0.611805 8_1:+88310547 Msa1223710:intron
GGCAATGAAGGAATTTGCAG+TGG 0.619899 8_1:+88310992 Msa1223710:CDS
TGAAGAGAAGGCATCAACCA+TGG 0.624686 8_1:+88310141 Msa1223710:CDS
ATAACAATGGAATGACGCAT+TGG 0.625745 8_1:-88311278 None:intergenic
GTGTAATTGCTCAAACAGAA+GGG 0.628227 8_1:+88311521 Msa1223710:CDS
TTTACTATTCCAAGATGACA+AGG 0.632555 8_1:+88311208 Msa1223710:CDS
CACATCTAATTCCTTCACCA+AGG 0.639481 8_1:-88311608 None:intergenic
TATGCCACCAGCATCTGTGT+GGG 0.645103 8_1:-88311183 None:intergenic
TCAACTCTACGGATATCCCA+TGG 0.659177 8_1:-88310564 None:intergenic
TTATGCCACCAGCATCTGTG+TGG 0.659371 8_1:-88311184 None:intergenic
ATACCTCAATTTGGTCACCA+AGG 0.670046 8_1:-88311304 None:intergenic
AGATCTGGCTTAGGACAAGG+AGG 0.670854 8_1:-88311143 None:intergenic
AGAGCCCACACAGATGCTGG+TGG 0.706268 8_1:+88311179 Msa1223710:CDS
ATATGTTAGAGTTAGGAAGG+TGG 0.716594 8_1:-88310729 None:intergenic
GATCTGGCTTAGGACAAGGA+GGG 0.742716 8_1:-88311142 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATAAAAACATTACTAAT+TGG - chr8_1:88310283-88310302 None:intergenic 10.0%
!!! ATTAGTAATGTTTTTATTAT+AGG + chr8_1:88310283-88310302 Msa1223710:intron 10.0%
!!! TTTTTTGTGTTATTAATTTT+AGG + chr8_1:88310967-88310986 Msa1223710:intron 10.0%
!! ATAATAAAAACATTACTAAT+TGG - chr8_1:88310283-88310302 None:intergenic 10.0%
!!! ATTAGTAATGTTTTTATTAT+AGG + chr8_1:88310283-88310302 Msa1223710:intron 10.0%
!!! TTTTTTGTGTTATTAATTTT+AGG + chr8_1:88310967-88310986 Msa1223710:intron 10.0%
!!! TTTTTTATGAGATTTATTTG+AGG + chr8_1:88310212-88310231 Msa1223710:intron 15.0%
!!! TGTATATATTTTTTTGTGTT+TGG + chr8_1:88310936-88310955 Msa1223710:intron 15.0%
!! ATATAATACTTTGTTAAAAC+AGG + chr8_1:88311462-88311481 Msa1223710:intron 15.0%
!!! AATCATCAAAAACAAATTTT+GGG - chr8_1:88311648-88311667 None:intergenic 15.0%
!!! TAATCATCAAAAACAAATTT+TGG - chr8_1:88311649-88311668 None:intergenic 15.0%
!!! TTAATTTTGTTTATTTGCTA+AGG + chr8_1:88311795-88311814 Msa1223710:three_prime_UTR 15.0%
!!! TTTTTTATGAGATTTATTTG+AGG + chr8_1:88310212-88310231 Msa1223710:intron 15.0%
!!! TGTATATATTTTTTTGTGTT+TGG + chr8_1:88310936-88310955 Msa1223710:intron 15.0%
!! ATATAATACTTTGTTAAAAC+AGG + chr8_1:88311462-88311481 Msa1223710:intron 15.0%
!!! AATCATCAAAAACAAATTTT+GGG - chr8_1:88311648-88311667 None:intergenic 15.0%
!!! TAATCATCAAAAACAAATTT+TGG - chr8_1:88311649-88311668 None:intergenic 15.0%
!!! TTAATTTTGTTTATTTGCTA+AGG + chr8_1:88311795-88311814 Msa1223710:three_prime_UTR 15.0%
!!! GTTTATTTGTTTCTTATTTG+TGG + chr8_1:88310508-88310527 Msa1223710:intron 20.0%
!!! AAATCGCATTTTAAAATAAG+AGG - chr8_1:88310819-88310838 None:intergenic 20.0%
!! AAATATATACACATAGATCA+TGG - chr8_1:88310927-88310946 None:intergenic 20.0%
!!! TTGTGTTATTAATTTTAGGA+AGG + chr8_1:88310971-88310990 Msa1223710:intron 20.0%
!!! GTTTATTTGTTTCTTATTTG+TGG + chr8_1:88310508-88310527 Msa1223710:intron 20.0%
!!! AAATCGCATTTTAAAATAAG+AGG - chr8_1:88310819-88310838 None:intergenic 20.0%
!! AAATATATACACATAGATCA+TGG - chr8_1:88310927-88310946 None:intergenic 20.0%
!!! TTGTGTTATTAATTTTAGGA+AGG + chr8_1:88310971-88310990 Msa1223710:intron 20.0%
! TAAAAGATGCTTGTGAAAAT+TGG + chr8_1:88310170-88310189 Msa1223710:CDS 25.0%
! AAAAGATGCTTGTGAAAATT+GGG + chr8_1:88310171-88310190 Msa1223710:CDS 25.0%
!!! TTGAATGAGTTTTAAGTAGA+AGG - chr8_1:88310359-88310378 None:intergenic 25.0%
! TTACGATATGATATCTATTG+TGG + chr8_1:88310881-88310900 Msa1223710:intron 25.0%
! TATTTGAAGAAAGTCTTTCA+TGG + chr8_1:88311080-88311099 Msa1223710:CDS 25.0%
! ATTAGTACTATACCTCAATT+TGG - chr8_1:88311316-88311335 None:intergenic 25.0%
!! TAATCAAAGGGTATAACTAT+AGG + chr8_1:88311332-88311351 Msa1223710:intron 25.0%
! CCTCAAAATTCGTAATATTA+CGG + chr8_1:88311388-88311407 Msa1223710:intron 25.0%
! TGGATTATAAAATGATGCTA+TGG - chr8_1:88311557-88311576 None:intergenic 25.0%
!! ATAGCATCATTTTATAATCC+AGG + chr8_1:88311556-88311575 Msa1223710:CDS 25.0%
!!! AAACAAATTTTGGGTAAACT+TGG - chr8_1:88311639-88311658 None:intergenic 25.0%
! TAAAAGATGCTTGTGAAAAT+TGG + chr8_1:88310170-88310189 Msa1223710:CDS 25.0%
! AAAAGATGCTTGTGAAAATT+GGG + chr8_1:88310171-88310190 Msa1223710:CDS 25.0%
!!! TTGAATGAGTTTTAAGTAGA+AGG - chr8_1:88310359-88310378 None:intergenic 25.0%
! TTACGATATGATATCTATTG+TGG + chr8_1:88310881-88310900 Msa1223710:intron 25.0%
! TATTTGAAGAAAGTCTTTCA+TGG + chr8_1:88311080-88311099 Msa1223710:CDS 25.0%
! ATTAGTACTATACCTCAATT+TGG - chr8_1:88311316-88311335 None:intergenic 25.0%
!! TAATCAAAGGGTATAACTAT+AGG + chr8_1:88311332-88311351 Msa1223710:intron 25.0%
! CCTCAAAATTCGTAATATTA+CGG + chr8_1:88311388-88311407 Msa1223710:intron 25.0%
! TGGATTATAAAATGATGCTA+TGG - chr8_1:88311557-88311576 None:intergenic 25.0%
!! ATAGCATCATTTTATAATCC+AGG + chr8_1:88311556-88311575 Msa1223710:CDS 25.0%
!!! AAACAAATTTTGGGTAAACT+TGG - chr8_1:88311639-88311658 None:intergenic 25.0%
AAAGATGCTTGTGAAAATTG+GGG + chr8_1:88310172-88310191 Msa1223710:CDS 30.0%
!!! TTAGTTGTCATGCTAGTTTT+TGG + chr8_1:88310319-88310338 Msa1223710:intron 30.0%
!!! TAGTTGTCATGCTAGTTTTT+GGG + chr8_1:88310320-88310339 Msa1223710:intron 30.0%
GTACTACTAATTAGTATGTC+CGG - chr8_1:88310414-88310433 None:intergenic 30.0%
CAACTTCATCAAACAACATA+AGG - chr8_1:88310539-88310558 None:intergenic 30.0%
! CTTATGTTGTTTGATGAAGT+TGG + chr8_1:88310537-88310556 Msa1223710:intron 30.0%
! AGAAATCAATGACTTGGATT+GGG + chr8_1:88310687-88310706 Msa1223710:CDS 30.0%
ATCTCTGATATGTTAGAGTT+AGG - chr8_1:88310739-88310758 None:intergenic 30.0%
GATTTGAACCTTCATATTGT+GGG + chr8_1:88310834-88310853 Msa1223710:intron 30.0%
! TACATTTTCCCACAATATGA+AGG - chr8_1:88310845-88310864 None:intergenic 30.0%
!! TAATTTTAGGAAGGCAATGA+AGG + chr8_1:88310980-88310999 Msa1223710:intron 30.0%
! CTAACTTTGGTTCCAAAATT+TGG - chr8_1:88311116-88311135 None:intergenic 30.0%
TTTACTATTCCAAGATGACA+AGG + chr8_1:88311208-88311227 Msa1223710:CDS 30.0%
TGAGGTATAGTACTAATCAA+AGG + chr8_1:88311319-88311338 Msa1223710:intron 30.0%
GAGGTATAGTACTAATCAAA+GGG + chr8_1:88311320-88311339 Msa1223710:intron 30.0%
! CCGTAATATTACGAATTTTG+AGG - chr8_1:88311391-88311410 None:intergenic 30.0%
TTAAAACAGGTGATTACCAA+TGG + chr8_1:88311475-88311494 Msa1223710:intron 30.0%
! AATTTTCTCATCACATGCTT+AGG - chr8_1:88311764-88311783 None:intergenic 30.0%
AAAGATGCTTGTGAAAATTG+GGG + chr8_1:88310172-88310191 Msa1223710:CDS 30.0%
!!! TTAGTTGTCATGCTAGTTTT+TGG + chr8_1:88310319-88310338 Msa1223710:intron 30.0%
!!! TAGTTGTCATGCTAGTTTTT+GGG + chr8_1:88310320-88310339 Msa1223710:intron 30.0%
GTACTACTAATTAGTATGTC+CGG - chr8_1:88310414-88310433 None:intergenic 30.0%
CAACTTCATCAAACAACATA+AGG - chr8_1:88310539-88310558 None:intergenic 30.0%
! CTTATGTTGTTTGATGAAGT+TGG + chr8_1:88310537-88310556 Msa1223710:intron 30.0%
! AGAAATCAATGACTTGGATT+GGG + chr8_1:88310687-88310706 Msa1223710:CDS 30.0%
ATCTCTGATATGTTAGAGTT+AGG - chr8_1:88310739-88310758 None:intergenic 30.0%
GATTTGAACCTTCATATTGT+GGG + chr8_1:88310834-88310853 Msa1223710:intron 30.0%
! TACATTTTCCCACAATATGA+AGG - chr8_1:88310845-88310864 None:intergenic 30.0%
!! TAATTTTAGGAAGGCAATGA+AGG + chr8_1:88310980-88310999 Msa1223710:intron 30.0%
! CTAACTTTGGTTCCAAAATT+TGG - chr8_1:88311116-88311135 None:intergenic 30.0%
TTTACTATTCCAAGATGACA+AGG + chr8_1:88311208-88311227 Msa1223710:CDS 30.0%
TGAGGTATAGTACTAATCAA+AGG + chr8_1:88311319-88311338 Msa1223710:intron 30.0%
GAGGTATAGTACTAATCAAA+GGG + chr8_1:88311320-88311339 Msa1223710:intron 30.0%
! CCGTAATATTACGAATTTTG+AGG - chr8_1:88311391-88311410 None:intergenic 30.0%
TTAAAACAGGTGATTACCAA+TGG + chr8_1:88311475-88311494 Msa1223710:intron 30.0%
! AATTTTCTCATCACATGCTT+AGG - chr8_1:88311764-88311783 None:intergenic 30.0%
AGATTCTTCATGTCAACTAC+TGG - chr8_1:88310115-88310134 None:intergenic 35.0%
GAATCTTAACACTGAAGAGA+AGG + chr8_1:88310129-88310148 Msa1223710:CDS 35.0%
! AGCATCTTTTATGATCTCCA+TGG - chr8_1:88310161-88310180 None:intergenic 35.0%
TGAAAATTGGGGTTTCTTTG+AGG + chr8_1:88310183-88310202 Msa1223710:CDS 35.0%
AATTGGTATGCATATATCCG+TGG - chr8_1:88310266-88310285 None:intergenic 35.0%
!!! AGTTTTAAGTAGAAGGTTGC+AGG - chr8_1:88310352-88310371 None:intergenic 35.0%
AACTTTGTCCATCAACTCTA+CGG - chr8_1:88310578-88310597 None:intergenic 35.0%
! AGAAAACTACAAGAAGCGTA+TGG + chr8_1:88310612-88310631 Msa1223710:CDS 35.0%
AAAGAAATGGTAGCAAGCAA+AGG + chr8_1:88310646-88310665 Msa1223710:CDS 35.0%
TCAGTCAGAAATCAATGACT+TGG + chr8_1:88310681-88310700 Msa1223710:CDS 35.0%
! CAGAAATCAATGACTTGGAT+TGG + chr8_1:88310686-88310705 Msa1223710:CDS 35.0%
ATATGTTAGAGTTAGGAAGG+TGG - chr8_1:88310732-88310751 None:intergenic 35.0%
CTGATATGTTAGAGTTAGGA+AGG - chr8_1:88310735-88310754 None:intergenic 35.0%
TGTAGTCATGATCAAGATCA+AGG - chr8_1:88310762-88310781 None:intergenic 35.0%
TTGATCTTGATCATGACTAC+AGG + chr8_1:88310761-88310780 Msa1223710:CDS 35.0%
CGATTTGAACCTTCATATTG+TGG + chr8_1:88310833-88310852 Msa1223710:intron 35.0%
! GTGGGAAAATGTAGTTGATA+CGG + chr8_1:88310852-88310871 Msa1223710:intron 35.0%
AAAGTCTTTCATGGATCCAA+GGG + chr8_1:88311089-88311108 Msa1223710:CDS 35.0%
ATAACAATGGAATGACGCAT+TGG - chr8_1:88311281-88311300 None:intergenic 35.0%
CATTCCATTGTTATCAACCT+TGG + chr8_1:88311287-88311306 Msa1223710:CDS 35.0%
CTTCTGTTTGAGCAATTACA+CGG - chr8_1:88311522-88311541 None:intergenic 35.0%
GTGTAATTGCTCAAACAGAA+GGG + chr8_1:88311521-88311540 Msa1223710:CDS 35.0%
GATTACATGAAACTCTATGC+TGG + chr8_1:88311664-88311683 Msa1223710:CDS 35.0%
! CTAAGGTTTCTGAATGCTTT+TGG + chr8_1:88311812-88311831 Msa1223710:three_prime_UTR 35.0%
! ATGCTTTTGGTCTCTTTGAT+TGG + chr8_1:88311825-88311844 Msa1223710:three_prime_UTR 35.0%
TTTATGCTACACATGCACAT+AGG - chr8_1:88311862-88311881 None:intergenic 35.0%
AGATTCTTCATGTCAACTAC+TGG - chr8_1:88310115-88310134 None:intergenic 35.0%
GAATCTTAACACTGAAGAGA+AGG + chr8_1:88310129-88310148 Msa1223710:CDS 35.0%
! AGCATCTTTTATGATCTCCA+TGG - chr8_1:88310161-88310180 None:intergenic 35.0%
TGAAAATTGGGGTTTCTTTG+AGG + chr8_1:88310183-88310202 Msa1223710:CDS 35.0%
AATTGGTATGCATATATCCG+TGG - chr8_1:88310266-88310285 None:intergenic 35.0%
!!! AGTTTTAAGTAGAAGGTTGC+AGG - chr8_1:88310352-88310371 None:intergenic 35.0%
AACTTTGTCCATCAACTCTA+CGG - chr8_1:88310578-88310597 None:intergenic 35.0%
! AGAAAACTACAAGAAGCGTA+TGG + chr8_1:88310612-88310631 Msa1223710:CDS 35.0%
AAAGAAATGGTAGCAAGCAA+AGG + chr8_1:88310646-88310665 Msa1223710:CDS 35.0%
TCAGTCAGAAATCAATGACT+TGG + chr8_1:88310681-88310700 Msa1223710:CDS 35.0%
! CAGAAATCAATGACTTGGAT+TGG + chr8_1:88310686-88310705 Msa1223710:CDS 35.0%
ATATGTTAGAGTTAGGAAGG+TGG - chr8_1:88310732-88310751 None:intergenic 35.0%
CTGATATGTTAGAGTTAGGA+AGG - chr8_1:88310735-88310754 None:intergenic 35.0%
TGTAGTCATGATCAAGATCA+AGG - chr8_1:88310762-88310781 None:intergenic 35.0%
TTGATCTTGATCATGACTAC+AGG + chr8_1:88310761-88310780 Msa1223710:CDS 35.0%
CGATTTGAACCTTCATATTG+TGG + chr8_1:88310833-88310852 Msa1223710:intron 35.0%
! GTGGGAAAATGTAGTTGATA+CGG + chr8_1:88310852-88310871 Msa1223710:intron 35.0%
AAAGTCTTTCATGGATCCAA+GGG + chr8_1:88311089-88311108 Msa1223710:CDS 35.0%
ATAACAATGGAATGACGCAT+TGG - chr8_1:88311281-88311300 None:intergenic 35.0%
CATTCCATTGTTATCAACCT+TGG + chr8_1:88311287-88311306 Msa1223710:CDS 35.0%
CTTCTGTTTGAGCAATTACA+CGG - chr8_1:88311522-88311541 None:intergenic 35.0%
GTGTAATTGCTCAAACAGAA+GGG + chr8_1:88311521-88311540 Msa1223710:CDS 35.0%
GATTACATGAAACTCTATGC+TGG + chr8_1:88311664-88311683 Msa1223710:CDS 35.0%
! CTAAGGTTTCTGAATGCTTT+TGG + chr8_1:88311812-88311831 Msa1223710:three_prime_UTR 35.0%
! ATGCTTTTGGTCTCTTTGAT+TGG + chr8_1:88311825-88311844 Msa1223710:three_prime_UTR 35.0%
TTTATGCTACACATGCACAT+AGG - chr8_1:88311862-88311881 None:intergenic 35.0%
GGTACTCTATGATGCTAAGT+TGG + chr8_1:88310233-88310252 Msa1223710:intron 40.0%
! AGGGGAAATCAGTCTTTTGA+AGG - chr8_1:88310452-88310471 None:intergenic 40.0%
TACACAACCTGAATATGCAG+GGG - chr8_1:88310470-88310489 None:intergenic 40.0%
GTACACAACCTGAATATGCA+GGG - chr8_1:88310471-88310490 None:intergenic 40.0%
AGTACACAACCTGAATATGC+AGG - chr8_1:88310472-88310491 None:intergenic 40.0%
GGTTGTGTACTTGTGTTTGA+AGG + chr8_1:88310481-88310500 Msa1223710:intron 40.0%
!! TTGATGAAGTTGGTGAACCA+TGG + chr8_1:88310547-88310566 Msa1223710:intron 40.0%
!! TGATGAAGTTGGTGAACCAT+GGG + chr8_1:88310548-88310567 Msa1223710:intron 40.0%
GGAGCAAAGGTTCAAAGAAA+TGG + chr8_1:88310633-88310652 Msa1223710:CDS 40.0%
!! ACTTGCTGTGTGAGAATCTT+GGG + chr8_1:88311045-88311064 Msa1223710:CDS 40.0%
! AGAATCTTGGGCTAGAGAAA+GGG + chr8_1:88311057-88311076 Msa1223710:CDS 40.0%
GAAAGTCTTTCATGGATCCA+AGG + chr8_1:88311088-88311107 Msa1223710:CDS 40.0%
! ATAAGATCTGGCTTAGGACA+AGG - chr8_1:88311149-88311168 None:intergenic 40.0%
! CCTTTGATAAGATCTGGCTT+AGG - chr8_1:88311155-88311174 None:intergenic 40.0%
CCTAAGCCAGATCTTATCAA+AGG + chr8_1:88311152-88311171 Msa1223710:CDS 40.0%
CTGAGTCCTTTGATAAGATC+TGG - chr8_1:88311161-88311180 None:intergenic 40.0%
CTATTCCAAGATGACAAGGT+TGG + chr8_1:88311212-88311231 Msa1223710:CDS 40.0%
CAATCCATTGGCCATCTTTA+AGG - chr8_1:88311250-88311269 None:intergenic 40.0%
!! GTCACCAAGGTTGATAACAA+TGG - chr8_1:88311294-88311313 None:intergenic 40.0%
ATACCTCAATTTGGTCACCA+AGG - chr8_1:88311307-88311326 None:intergenic 40.0%
CACACTCTTGTATTTGCCAT+TGG - chr8_1:88311494-88311513 None:intergenic 40.0%
CGTGTAATTGCTCAAACAGA+AGG + chr8_1:88311520-88311539 Msa1223710:CDS 40.0%
CACATCTAATTCCTTCACCA+AGG - chr8_1:88311611-88311630 None:intergenic 40.0%
! AGCTTCAAATCTTGGCTCTT+TGG - chr8_1:88311704-88311723 None:intergenic 40.0%
! GCCAAGATTTGAAGCTATGA+AGG + chr8_1:88311708-88311727 Msa1223710:CDS 40.0%
GCCTTCATAGCTTCAAATCT+TGG - chr8_1:88311712-88311731 None:intergenic 40.0%
! ATTTGAAGCTATGAAGGCCA+TGG + chr8_1:88311714-88311733 Msa1223710:CDS 40.0%
TATGGGAATGTTGGATTCCA+TGG - chr8_1:88311734-88311753 None:intergenic 40.0%
GTCTCTTTGATTGGTATCAG+CGG + chr8_1:88311834-88311853 Msa1223710:three_prime_UTR 40.0%
GGTACTCTATGATGCTAAGT+TGG + chr8_1:88310233-88310252 Msa1223710:intron 40.0%
! AGGGGAAATCAGTCTTTTGA+AGG - chr8_1:88310452-88310471 None:intergenic 40.0%
TACACAACCTGAATATGCAG+GGG - chr8_1:88310470-88310489 None:intergenic 40.0%
GTACACAACCTGAATATGCA+GGG - chr8_1:88310471-88310490 None:intergenic 40.0%
AGTACACAACCTGAATATGC+AGG - chr8_1:88310472-88310491 None:intergenic 40.0%
GGTTGTGTACTTGTGTTTGA+AGG + chr8_1:88310481-88310500 Msa1223710:intron 40.0%
!! TTGATGAAGTTGGTGAACCA+TGG + chr8_1:88310547-88310566 Msa1223710:intron 40.0%
!! TGATGAAGTTGGTGAACCAT+GGG + chr8_1:88310548-88310567 Msa1223710:intron 40.0%
GGAGCAAAGGTTCAAAGAAA+TGG + chr8_1:88310633-88310652 Msa1223710:CDS 40.0%
!! ACTTGCTGTGTGAGAATCTT+GGG + chr8_1:88311045-88311064 Msa1223710:CDS 40.0%
! AGAATCTTGGGCTAGAGAAA+GGG + chr8_1:88311057-88311076 Msa1223710:CDS 40.0%
GAAAGTCTTTCATGGATCCA+AGG + chr8_1:88311088-88311107 Msa1223710:CDS 40.0%
! ATAAGATCTGGCTTAGGACA+AGG - chr8_1:88311149-88311168 None:intergenic 40.0%
! CCTTTGATAAGATCTGGCTT+AGG - chr8_1:88311155-88311174 None:intergenic 40.0%
CCTAAGCCAGATCTTATCAA+AGG + chr8_1:88311152-88311171 Msa1223710:CDS 40.0%
CTGAGTCCTTTGATAAGATC+TGG - chr8_1:88311161-88311180 None:intergenic 40.0%
CTATTCCAAGATGACAAGGT+TGG + chr8_1:88311212-88311231 Msa1223710:CDS 40.0%
CAATCCATTGGCCATCTTTA+AGG - chr8_1:88311250-88311269 None:intergenic 40.0%
!! GTCACCAAGGTTGATAACAA+TGG - chr8_1:88311294-88311313 None:intergenic 40.0%
ATACCTCAATTTGGTCACCA+AGG - chr8_1:88311307-88311326 None:intergenic 40.0%
CACACTCTTGTATTTGCCAT+TGG - chr8_1:88311494-88311513 None:intergenic 40.0%
CGTGTAATTGCTCAAACAGA+AGG + chr8_1:88311520-88311539 Msa1223710:CDS 40.0%
CACATCTAATTCCTTCACCA+AGG - chr8_1:88311611-88311630 None:intergenic 40.0%
! AGCTTCAAATCTTGGCTCTT+TGG - chr8_1:88311704-88311723 None:intergenic 40.0%
! GCCAAGATTTGAAGCTATGA+AGG + chr8_1:88311708-88311727 Msa1223710:CDS 40.0%
GCCTTCATAGCTTCAAATCT+TGG - chr8_1:88311712-88311731 None:intergenic 40.0%
! ATTTGAAGCTATGAAGGCCA+TGG + chr8_1:88311714-88311733 Msa1223710:CDS 40.0%
TATGGGAATGTTGGATTCCA+TGG - chr8_1:88311734-88311753 None:intergenic 40.0%
GTCTCTTTGATTGGTATCAG+CGG + chr8_1:88311834-88311853 Msa1223710:three_prime_UTR 40.0%
!! TGAAGAGAAGGCATCAACCA+TGG + chr8_1:88310141-88310160 Msa1223710:CDS 45.0%
! CTATGATGCTAAGTTGGCCA+CGG + chr8_1:88310239-88310258 Msa1223710:intron 45.0%
CTAATTAGTATGTCCGGCGT+AGG - chr8_1:88310408-88310427 None:intergenic 45.0%
CTGATTTCCCCTGCATATTC+AGG + chr8_1:88310460-88310479 Msa1223710:intron 45.0%
TCAACTCTACGGATATCCCA+TGG - chr8_1:88310567-88310586 None:intergenic 45.0%
TGGGATATCCGTAGAGTTGA+TGG + chr8_1:88310567-88310586 Msa1223710:CDS 45.0%
! ACAAGAAGCGTATGGAGCAA+AGG + chr8_1:88310620-88310639 Msa1223710:CDS 45.0%
GGCAATGAAGGAATTTGCAG+TGG + chr8_1:88310992-88311011 Msa1223710:CDS 45.0%
TGCAGTGGAACTTGAGAAAC+TGG + chr8_1:88311007-88311026 Msa1223710:CDS 45.0%
!! GACTTGCTGTGTGAGAATCT+TGG + chr8_1:88311044-88311063 Msa1223710:CDS 45.0%
! GAGAATCTTGGGCTAGAGAA+AGG + chr8_1:88311056-88311075 Msa1223710:CDS 45.0%
! GGATCCAAGGGACCAAATTT+TGG + chr8_1:88311101-88311120 Msa1223710:CDS 45.0%
GGTTCCAAAATTTGGTCCCT+TGG - chr8_1:88311108-88311127 None:intergenic 45.0%
AGGAGGGTAGTTGCTAACTT+TGG - chr8_1:88311129-88311148 None:intergenic 45.0%
TTCCAAGATGACAAGGTTGG+TGG + chr8_1:88311215-88311234 Msa1223710:CDS 45.0%
GGACTTCAGCTCCTTAAAGA+TGG + chr8_1:88311236-88311255 Msa1223710:CDS 45.0%
AGCTCCTTAAAGATGGCCAA+TGG + chr8_1:88311243-88311262 Msa1223710:CDS 45.0%
TTGGTGGGACATCAATCCAT+TGG - chr8_1:88311262-88311281 None:intergenic 45.0%
! CAATGGAATGACGCATTGGT+GGG - chr8_1:88311277-88311296 None:intergenic 45.0%
ACAATGGAATGACGCATTGG+TGG - chr8_1:88311278-88311297 None:intergenic 45.0%
! CAACCTTGGTGACCAAATTG+AGG + chr8_1:88311301-88311320 Msa1223710:CDS 45.0%
GAGATTACTGCATCATTGCC+TGG - chr8_1:88311577-88311596 None:intergenic 45.0%
!! GCTCTTTGGCTTGGAATTTG+AGG - chr8_1:88311690-88311709 None:intergenic 45.0%
! CAAATCTTGGCTCTTTGGCT+TGG - chr8_1:88311699-88311718 None:intergenic 45.0%
! CATGCTTAGGCAGTTGGTAT+GGG - chr8_1:88311751-88311770 None:intergenic 45.0%
! ACATGCTTAGGCAGTTGGTA+TGG - chr8_1:88311752-88311771 None:intergenic 45.0%
TCATCACATGCTTAGGCAGT+TGG - chr8_1:88311757-88311776 None:intergenic 45.0%
!! TGAAGAGAAGGCATCAACCA+TGG + chr8_1:88310141-88310160 Msa1223710:CDS 45.0%
! CTATGATGCTAAGTTGGCCA+CGG + chr8_1:88310239-88310258 Msa1223710:intron 45.0%
CTAATTAGTATGTCCGGCGT+AGG - chr8_1:88310408-88310427 None:intergenic 45.0%
CTGATTTCCCCTGCATATTC+AGG + chr8_1:88310460-88310479 Msa1223710:intron 45.0%
TCAACTCTACGGATATCCCA+TGG - chr8_1:88310567-88310586 None:intergenic 45.0%
TGGGATATCCGTAGAGTTGA+TGG + chr8_1:88310567-88310586 Msa1223710:CDS 45.0%
! ACAAGAAGCGTATGGAGCAA+AGG + chr8_1:88310620-88310639 Msa1223710:CDS 45.0%
GGCAATGAAGGAATTTGCAG+TGG + chr8_1:88310992-88311011 Msa1223710:CDS 45.0%
TGCAGTGGAACTTGAGAAAC+TGG + chr8_1:88311007-88311026 Msa1223710:CDS 45.0%
!! GACTTGCTGTGTGAGAATCT+TGG + chr8_1:88311044-88311063 Msa1223710:CDS 45.0%
! GAGAATCTTGGGCTAGAGAA+AGG + chr8_1:88311056-88311075 Msa1223710:CDS 45.0%
! GGATCCAAGGGACCAAATTT+TGG + chr8_1:88311101-88311120 Msa1223710:CDS 45.0%
GGTTCCAAAATTTGGTCCCT+TGG - chr8_1:88311108-88311127 None:intergenic 45.0%
AGGAGGGTAGTTGCTAACTT+TGG - chr8_1:88311129-88311148 None:intergenic 45.0%
TTCCAAGATGACAAGGTTGG+TGG + chr8_1:88311215-88311234 Msa1223710:CDS 45.0%
GGACTTCAGCTCCTTAAAGA+TGG + chr8_1:88311236-88311255 Msa1223710:CDS 45.0%
AGCTCCTTAAAGATGGCCAA+TGG + chr8_1:88311243-88311262 Msa1223710:CDS 45.0%
TTGGTGGGACATCAATCCAT+TGG - chr8_1:88311262-88311281 None:intergenic 45.0%
! CAATGGAATGACGCATTGGT+GGG - chr8_1:88311277-88311296 None:intergenic 45.0%
ACAATGGAATGACGCATTGG+TGG - chr8_1:88311278-88311297 None:intergenic 45.0%
! CAACCTTGGTGACCAAATTG+AGG + chr8_1:88311301-88311320 Msa1223710:CDS 45.0%
GAGATTACTGCATCATTGCC+TGG - chr8_1:88311577-88311596 None:intergenic 45.0%
!! GCTCTTTGGCTTGGAATTTG+AGG - chr8_1:88311690-88311709 None:intergenic 45.0%
! CAAATCTTGGCTCTTTGGCT+TGG - chr8_1:88311699-88311718 None:intergenic 45.0%
! CATGCTTAGGCAGTTGGTAT+GGG - chr8_1:88311751-88311770 None:intergenic 45.0%
! ACATGCTTAGGCAGTTGGTA+TGG - chr8_1:88311752-88311771 None:intergenic 45.0%
TCATCACATGCTTAGGCAGT+TGG - chr8_1:88311757-88311776 None:intergenic 45.0%
ATGCATATATCCGTGGACCG+TGG - chr8_1:88310259-88310278 None:intergenic 50.0%
ACTGATCGAACTACCTACGC+CGG + chr8_1:88310392-88310411 Msa1223710:intron 50.0%
! GATCTGGCTTAGGACAAGGA+GGG - chr8_1:88311145-88311164 None:intergenic 50.0%
! AGATCTGGCTTAGGACAAGG+AGG - chr8_1:88311146-88311165 None:intergenic 50.0%
TATGCCACCAGCATCTGTGT+GGG - chr8_1:88311186-88311205 None:intergenic 50.0%
TTATGCCACCAGCATCTGTG+TGG - chr8_1:88311187-88311206 None:intergenic 50.0%
GTCCACCAACCTTGTCATCT+TGG - chr8_1:88311220-88311239 None:intergenic 50.0%
! GGCAGTTGGTATGGGAATGT+TGG - chr8_1:88311743-88311762 None:intergenic 50.0%
ATGCATATATCCGTGGACCG+TGG - chr8_1:88310259-88310278 None:intergenic 50.0%
ACTGATCGAACTACCTACGC+CGG + chr8_1:88310392-88310411 Msa1223710:intron 50.0%
! GATCTGGCTTAGGACAAGGA+GGG - chr8_1:88311145-88311164 None:intergenic 50.0%
! AGATCTGGCTTAGGACAAGG+AGG - chr8_1:88311146-88311165 None:intergenic 50.0%
TATGCCACCAGCATCTGTGT+GGG - chr8_1:88311186-88311205 None:intergenic 50.0%
TTATGCCACCAGCATCTGTG+TGG - chr8_1:88311187-88311206 None:intergenic 50.0%
GTCCACCAACCTTGTCATCT+TGG - chr8_1:88311220-88311239 None:intergenic 50.0%
! GGCAGTTGGTATGGGAATGT+TGG - chr8_1:88311743-88311762 None:intergenic 50.0%
AATCTCTCCTGCAGCAGCCT+TGG + chr8_1:88311591-88311610 Msa1223710:CDS 55.0%
AATCTCTCCTGCAGCAGCCT+TGG + chr8_1:88311591-88311610 Msa1223710:CDS 55.0%
! GCTAAGTTGGCCACGGTCCA+CGG + chr8_1:88310246-88310265 Msa1223710:intron 60.0%
CTCAGAGCCCACACAGATGC+TGG + chr8_1:88311176-88311195 Msa1223710:CDS 60.0%
AGAGCCCACACAGATGCTGG+TGG + chr8_1:88311179-88311198 Msa1223710:CDS 60.0%
TCCTGCAGCAGCCTTGGTGA+AGG + chr8_1:88311597-88311616 Msa1223710:CDS 60.0%
TCCTTCACCAAGGCTGCTGC+AGG - chr8_1:88311601-88311620 None:intergenic 60.0%
! GCTAAGTTGGCCACGGTCCA+CGG + chr8_1:88310246-88310265 Msa1223710:intron 60.0%
CTCAGAGCCCACACAGATGC+TGG + chr8_1:88311176-88311195 Msa1223710:CDS 60.0%
AGAGCCCACACAGATGCTGG+TGG + chr8_1:88311179-88311198 Msa1223710:CDS 60.0%
TCCTGCAGCAGCCTTGGTGA+AGG + chr8_1:88311597-88311616 Msa1223710:CDS 60.0%
TCCTTCACCAAGGCTGCTGC+AGG - chr8_1:88311601-88311620 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 88310100 88311922 88310100 ID=Msa1223710;Name=Msa1223710
chr8_1 mRNA 88310100 88311922 88310100 ID=Msa1223710-mRNA-1;Parent=Msa1223710;Name=Msa1223710-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|1|0.75|1|1|1|4|157|315
chr8_1 exon 88310100 88310204 88310100 ID=Msa1223710-mRNA-1:exon:32064;Parent=Msa1223710-mRNA-1
chr8_1 exon 88310556 88310782 88310556 ID=Msa1223710-mRNA-1:exon:32065;Parent=Msa1223710-mRNA-1
chr8_1 exon 88310989 88311322 88310989 ID=Msa1223710-mRNA-1:exon:32066;Parent=Msa1223710-mRNA-1
chr8_1 exon 88311484 88311922 88311484 ID=Msa1223710-mRNA-1:exon:32067;Parent=Msa1223710-mRNA-1
chr8_1 CDS 88310100 88310204 88310100 ID=Msa1223710-mRNA-1:cds;Parent=Msa1223710-mRNA-1
chr8_1 CDS 88310556 88310782 88310556 ID=Msa1223710-mRNA-1:cds;Parent=Msa1223710-mRNA-1
chr8_1 CDS 88310989 88311322 88310989 ID=Msa1223710-mRNA-1:cds;Parent=Msa1223710-mRNA-1
chr8_1 CDS 88311484 88311765 88311484 ID=Msa1223710-mRNA-1:cds;Parent=Msa1223710-mRNA-1
chr8_1 three_prime_UTR 88311766 88311922 88311766 ID=Msa1223710-mRNA-1:three_prime_utr;Parent=Msa1223710-mRNA-1
Gene Sequence

>Msa1223710

ATGGAGAAGTTTCCAGTAGTTGACATGAAGAATCTTAACACTGAAGAGAAGGCATCAACCATGGAGATCATAAAAGATGCTTGTGAAAATTGGGGTTTCTTTGAGTTGGTGAACCATGGGATATCCGTAGAGTTGATGGACAAAGTTGAGAAGCTGACAAAAGAAAACTACAAGAAGCGTATGGAGCAAAGGTTCAAAGAAATGGTAGCAAGCAAAGGTTTAGAGTTTGCTCAGTCAGAAATCAATGACTTGGATTGGGAAAGCACTTTCTTTTTGCGCCACCTTCCTAACTCTAACATATCAGAGATCCTTGATCTTGATCATGACTACAGGAAGGCAATGAAGGAATTTGCAGTGGAACTTGAGAAACTGGCTGAGCTACTTCTTGACTTGCTGTGTGAGAATCTTGGGCTAGAGAAAGGGTATTTGAAGAAAGTCTTTCATGGATCCAAGGGACCAAATTTTGGAACCAAAGTTAGCAACTACCCTCCTTGTCCTAAGCCAGATCTTATCAAAGGACTCAGAGCCCACACAGATGCTGGTGGCATAATTTTACTATTCCAAGATGACAAGGTTGGTGGACTTCAGCTCCTTAAAGATGGCCAATGGATTGATGTCCCACCAATGCGTCATTCCATTGTTATCAACCTTGGTGACCAAATTGAGGTGATTACCAATGGCAAATACAAGAGTGTGTTGCACCGTGTAATTGCTCAAACAGAAGGGAACAGAATGTCCATAGCATCATTTTATAATCCAGGCAATGATGCAGTAATCTCTCCTGCAGCAGCCTTGGTGAAGGAATTAGATGTGACAAACCAAGTTTACCCAAAATTTGTTTTTGATGATTACATGAAACTCTATGCTGGCCTCAAATTCCAAGCCAAAGAGCCAAGATTTGAAGCTATGAAGGCCATGGAATCCAACATTCCCATACCAACTGCCTAA
Protein sequence

>Msa1223710

MEKFPVVDMKNLNTEEKASTMEIIKDACENWGFFELVNHGISVELMDKVEKLTKENYKKRMEQRFKEMVASKGLEFAQSEINDLDWESTFFLRHLPNSNISEILDLDHDYRKAMKEFAVELEKLAELLLDLLCENLGLEKGYLKKVFHGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVGGLQLLKDGQWIDVPPMRHSIVINLGDQIEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGNDAVISPAAALVKELDVTNQVYPKFVFDDYMKLYAGLKFQAKEPRFEAMKAMESNIPIPTA*