Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0196440 | XP_013462785.2 | 95.509 | 334 | 15 | 0 | 51 | 384 | 16 | 349 | 0.0 | 664 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0196440 | sp|Q8LPL7|ADAL_ARATH | 63.526 | 329 | 116 | 2 | 51 | 379 | 27 | 351 | 6.88e-149 | 428 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0196440 | A0A396J380 | 95.509 | 334 | 15 | 0 | 51 | 384 | 29 | 362 | 0.0 | 664 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0039250 | Msa0196440 | 0.828340 | 9.492112e-55 | -8.615850e-47 |
| Msa0043500 | Msa0196440 | 0.815980 | 6.999095e-52 | -8.615850e-47 |
| Msa0055070 | Msa0196440 | 0.801156 | 1.028577e-48 | -8.615850e-47 |
| Msa0133720 | Msa0196440 | 0.839525 | 1.504403e-57 | -8.615850e-47 |
| Msa0133820 | Msa0196440 | 0.832031 | 1.191937e-55 | -8.615850e-47 |
| Msa0145110 | Msa0196440 | 0.806174 | 9.351495e-50 | -8.615850e-47 |
| Msa0193540 | Msa0196440 | 0.831766 | 1.385637e-55 | -8.615850e-47 |
| Msa0196440 | Msa0198520 | 0.804392 | 2.208881e-49 | -8.615850e-47 |
| Msa0196440 | Msa0198530 | 0.803753 | 2.998585e-49 | -8.615850e-47 |
| Msa0196440 | Msa0235470 | 0.810172 | 1.315195e-50 | -8.615850e-47 |
| Msa0196440 | Msa0238350 | 0.863884 | 1.809393e-64 | -8.615850e-47 |
| Msa0196440 | Msa0274630 | 0.834887 | 2.310734e-56 | -8.615850e-47 |
| Msa0196440 | Msa0275750 | 0.882484 | 1.002245e-70 | -8.615850e-47 |
| Msa0196440 | Msa0275800 | 0.828832 | 7.218401e-55 | -8.615850e-47 |
| Msa0196440 | Msa0314060 | 0.824614 | 7.336807e-54 | -8.615850e-47 |
| Msa0196440 | Msa0316210 | 0.905863 | 2.736168e-80 | -8.615850e-47 |
| Msa0196440 | Msa0318720 | 0.817815 | 2.711815e-52 | -8.615850e-47 |
| Msa0196440 | Msa0347950 | 0.814074 | 1.853668e-51 | -8.615850e-47 |
| Msa0196440 | Msa0347990 | 0.821803 | 3.324334e-53 | -8.615850e-47 |
| Msa0196440 | Msa0583500 | 0.802689 | 4.980775e-49 | -8.615850e-47 |
| Msa0196440 | Msa1158660 | 0.822481 | 2.314605e-53 | -8.615850e-47 |
| Msa0196440 | Msa1357080 | 0.803637 | 3.169289e-49 | -8.615850e-47 |
| Msa0196440 | Msa1366300 | 0.801013 | 1.099833e-48 | -8.615850e-47 |
| Msa0196440 | Msa1433220 | 0.808797 | 2.595326e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0196440 | MtrunA17_Chr2g0288101 | 95.509 | 334 | 15 | 0 | 51 | 384 | 29 | 362 | 0.0 | 664 |
| Msa0196440 | MtrunA17_Chr4g0074591 | 68.343 | 338 | 93 | 3 | 51 | 379 | 38 | 370 | 1.06e-163 | 464 |
| Msa0196440 | MtrunA17_Chr8g0346271 | 72.340 | 47 | 11 | 1 | 2 | 46 | 4 | 50 | 1.54e-16 | 73.6 |
| Msa0196440 | MtrunA17_Chr7g0219111 | 65.957 | 47 | 14 | 1 | 2 | 46 | 30 | 76 | 2.50e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0196440 | AT4G04880.1 | 63.526 | 329 | 116 | 2 | 51 | 379 | 27 | 351 | 6.99e-150 | 428 |
| Msa0196440 | AT4G04880.2 | 58.380 | 358 | 116 | 3 | 51 | 379 | 27 | 380 | 7.84e-144 | 414 |
| Msa0196440 | AT4G04880.3 | 63.347 | 251 | 85 | 3 | 51 | 301 | 27 | 270 | 1.22e-108 | 320 |
Find 88 sgRNAs with CRISPR-Local
Find 229 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTATAGAAGTTCACCATTT+TGG | 0.169515 | 2_1:+13656841 | Msa0196440:CDS |
| TCCCTGTCCCCGACGGGTTC+GGG | 0.201482 | 2_1:-13653702 | None:intergenic |
| ATCAGATAATGTTGTCTATT+TGG | 0.205652 | 2_1:+13655820 | Msa0196440:CDS |
| GCACTAGAAATGAGGCATTT+AGG | 0.266579 | 2_1:+13656282 | Msa0196440:CDS |
| ATCCCTGTCCCCGACGGGTT+CGG | 0.279714 | 2_1:-13653703 | None:intergenic |
| GTTGAAGTCTTCTAAAATTC+CGG | 0.298770 | 2_1:+13656690 | Msa0196440:CDS |
| TAATTCAGTGTCGAAGAATA+TGG | 0.328936 | 2_1:+13657616 | Msa0196440:CDS |
| TTTCTCATCCCCGTTGGGTA+TGG | 0.348326 | 2_1:+13653735 | Msa0196440:CDS |
| CCATTGCATTTATCATTGTT+AGG | 0.349227 | 2_1:-13656089 | None:intergenic |
| TAGCTGCTTCTGTTGTTTCT+CGG | 0.362736 | 2_1:-13656160 | None:intergenic |
| ATGTTGTCTATTTGGAGTTA+AGG | 0.369465 | 2_1:+13655828 | Msa0196440:CDS |
| AGCAAAAGAACATACCAAAA+TGG | 0.374049 | 2_1:-13656855 | None:intergenic |
| AAATATGCTGCTGATTCATT+TGG | 0.375776 | 2_1:+13657412 | Msa0196440:CDS |
| AACCCGTCGGGGACAGGGAT+GGG | 0.375782 | 2_1:+13653706 | Msa0196440:CDS |
| ATTCAGAGAAACGATTCAAT+TGG | 0.376629 | 2_1:+13655966 | Msa0196440:intron |
| ACGGGTAAGTATATGAGAAT+AGG | 0.379656 | 2_1:+13653766 | Msa0196440:CDS |
| CGGGTAAGTATATGAGAATA+GGG | 0.394125 | 2_1:+13653767 | Msa0196440:CDS |
| ATGGGATCCCCGAACCCGTC+GGG | 0.395834 | 2_1:+13653694 | Msa0196440:CDS |
| TCCCCGAACCCGTCGGGGAC+AGG | 0.398395 | 2_1:+13653700 | Msa0196440:CDS |
| ATGAGGCATTTAGGTGTAGT+TGG | 0.401125 | 2_1:+13656291 | Msa0196440:CDS |
| TGTGAATTAGATCAAACAAT+TGG | 0.402845 | 2_1:-13655643 | None:intergenic |
| GAGTATATATTTGCAGATAA+TGG | 0.414085 | 2_1:+13657566 | Msa0196440:CDS |
| TCTGACTTAGGCATGGCAAT+GGG | 0.414744 | 2_1:-13653811 | None:intergenic |
| TTCGATTTCTCATCCCCGTT+GGG | 0.416941 | 2_1:+13653730 | Msa0196440:CDS |
| TTCTCATCCCCGTTGGGTAT+GGG | 0.420968 | 2_1:+13653736 | Msa0196440:CDS |
| ACCCGTCGGGGACAGGGATG+GGG | 0.425820 | 2_1:+13653707 | Msa0196440:CDS |
| TGCGGGTACGGGGATGGGGA+TGG | 0.426687 | 2_1:+13653675 | None:intergenic |
| TTGGGTATGGGTAGGGTAAC+GGG | 0.433745 | 2_1:+13653748 | Msa0196440:CDS |
| TTTGTTTGACATCAAACATC+AGG | 0.434436 | 2_1:+13656803 | Msa0196440:CDS |
| CTTAGGCATGGCAATGGGGC+GGG | 0.439067 | 2_1:-13653806 | None:intergenic |
| GCGGGTACGGGGATGGGGAT+GGG | 0.447593 | 2_1:+13653676 | None:intergenic |
| TTACCCTACCCATACCCAAC+GGG | 0.448493 | 2_1:-13653744 | None:intergenic |
| TATGTTGACGCTGTAATTGA+AGG | 0.451211 | 2_1:+13656005 | Msa0196440:CDS |
| GAACCCGTCGGGGACAGGGA+TGG | 0.453797 | 2_1:+13653705 | Msa0196440:CDS |
| TTCTTTAGGGTTGGGAAGGT+GGG | 0.457089 | 2_1:+13657514 | Msa0196440:intron |
| GAATTTCATCCGCAAAGGAT+TGG | 0.463264 | 2_1:+13656631 | Msa0196440:CDS |
| ATTCTTTAGGGTTGGGAAGG+TGG | 0.467717 | 2_1:+13657513 | Msa0196440:intron |
| GTGGATTTCATTCCAAAGAC+TGG | 0.471560 | 2_1:+13656053 | Msa0196440:CDS |
| TCTATTCTTTAGGGTTGGGA+AGG | 0.473258 | 2_1:+13657510 | Msa0196440:intron |
| GTTCGATTTCTCATCCCCGT+TGG | 0.473599 | 2_1:+13653729 | Msa0196440:CDS |
| GTAGTTGGAATTGATCTCTC+TGG | 0.477585 | 2_1:+13656306 | Msa0196440:CDS |
| GGGAAATGTTTGAACTATCA+AGG | 0.479942 | 2_1:+13657534 | Msa0196440:CDS |
| GTTGGGTATGGGTAGGGTAA+CGG | 0.481814 | 2_1:+13653747 | Msa0196440:CDS |
| CCCCGAACCCGTCGGGGACA+GGG | 0.487330 | 2_1:+13653701 | Msa0196440:CDS |
| CAAAATCACTGTTCTGACTT+AGG | 0.490508 | 2_1:-13653823 | None:intergenic |
| CAAGCATGTCCAATCCTTTG+CGG | 0.493690 | 2_1:-13656640 | None:intergenic |
| CATATGACTATATGTCAGTC+AGG | 0.494566 | 2_1:+13657683 | Msa0196440:three_prime_UTR |
| TGCTATAAATTTCTCTCAAG+TGG | 0.496515 | 2_1:+13654844 | Msa0196440:CDS |
| GTCTTTGAATGAAACTCAAA+AGG | 0.498893 | 2_1:+13654820 | Msa0196440:CDS |
| CATATTGATATACCATTCAC+CGG | 0.502916 | 2_1:-13656340 | None:intergenic |
| TTGAGTTTCATTCAAAGACT+TGG | 0.504570 | 2_1:-13654816 | None:intergenic |
| AGAAACAACAGAAGCAGCTA+TGG | 0.509552 | 2_1:+13656163 | Msa0196440:CDS |
| CTGAAATTCGCACGAGAACA+AGG | 0.510435 | 2_1:+13656472 | Msa0196440:CDS |
| AGTATATGAGAATAGGGGAT+GGG | 0.510789 | 2_1:+13653773 | Msa0196440:CDS |
| GTATATGAGAATAGGGGATG+GGG | 0.511575 | 2_1:+13653774 | Msa0196440:CDS |
| CCCTGTCCCCGACGGGTTCG+GGG | 0.514633 | 2_1:-13653701 | None:intergenic |
| CATCCCCGTTGGGTATGGGT+AGG | 0.518749 | 2_1:+13653740 | Msa0196440:CDS |
| ACCCCATCCCTGTCCCCGAC+GGG | 0.520373 | 2_1:-13653708 | None:intergenic |
| AACCCCATCCCTGTCCCCGA+CGG | 0.535888 | 2_1:-13653709 | None:intergenic |
| TCATCAGTACATAGGACTAA+AGG | 0.537069 | 2_1:-13657352 | None:intergenic |
| TTCTGACTTAGGCATGGCAA+TGG | 0.537251 | 2_1:-13653812 | None:intergenic |
| TGCTTGAATTTCATCCGCAA+AGG | 0.546621 | 2_1:+13656626 | Msa0196440:CDS |
| ATCCCCGTTGGGTATGGGTA+GGG | 0.549063 | 2_1:+13653741 | Msa0196440:CDS |
| ACTTAGGCATGGCAATGGGG+CGG | 0.551826 | 2_1:-13653807 | None:intergenic |
| TCTCGTGCGAATTTCAGTGC+TGG | 0.552290 | 2_1:-13656466 | None:intergenic |
| CCTAACAATGATAAATGCAA+TGG | 0.553486 | 2_1:+13656089 | Msa0196440:CDS |
| GATGGGATCCCCGAACCCGT+CGG | 0.561361 | 2_1:+13653693 | Msa0196440:CDS |
| ATCAGTTAGCTCGGTCGATG+TGG | 0.576039 | 2_1:+13656034 | Msa0196440:CDS |
| ATGAGAATAGGGGATGGGGA+AGG | 0.576529 | 2_1:+13653778 | Msa0196440:CDS |
| AAGTATATGAGAATAGGGGA+TGG | 0.580115 | 2_1:+13653772 | Msa0196440:CDS |
| GTTACTTTGAAGATGAACAC+TGG | 0.595899 | 2_1:+13656662 | Msa0196440:CDS |
| TGGGATCCCCGAACCCGTCG+GGG | 0.599869 | 2_1:+13653695 | Msa0196440:CDS |
| TCAAGCTTGCACTAGAAATG+AGG | 0.601803 | 2_1:+13656274 | Msa0196440:CDS |
| TATTACAGATGAGCTTACAC+TGG | 0.611582 | 2_1:+13655610 | Msa0196440:intron |
| GGAGTTAAGGACTACTCCAA+AGG | 0.621368 | 2_1:+13655841 | Msa0196440:CDS |
| GGGTAAGTATATGAGAATAG+GGG | 0.632824 | 2_1:+13653768 | Msa0196440:CDS |
| CACATGTGTCATCAGTACAT+AGG | 0.638450 | 2_1:-13657360 | None:intergenic |
| TCACTGTTCTGACTTAGGCA+TGG | 0.640607 | 2_1:-13653818 | None:intergenic |
| AGGCGTAAGATCAGTTAGCT+CGG | 0.649204 | 2_1:+13656025 | Msa0196440:CDS |
| TCATGCAGCTTATTTGTACG+AGG | 0.651457 | 2_1:+13657321 | Msa0196440:intron |
| GTTACCCTACCCATACCCAA+CGG | 0.659888 | 2_1:-13653745 | None:intergenic |
| CTGACTTAGGCATGGCAATG+GGG | 0.685083 | 2_1:-13653810 | None:intergenic |
| CTGCTTCTGTTGTTTCTCGG+CGG | 0.694637 | 2_1:-13656157 | None:intergenic |
| TGAACTATCAAGGAATGCTG+TGG | 0.695948 | 2_1:+13657544 | Msa0196440:CDS |
| ATTCAATACAAGTCTCTCTG+AGG | 0.710482 | 2_1:+13657384 | Msa0196440:CDS |
| TACCCTACCCATACCCAACG+GGG | 0.727048 | 2_1:-13653743 | None:intergenic |
| TGTAACACTTCACTGCGGAG+AGG | 0.727183 | 2_1:+13656501 | Msa0196440:CDS |
| CTTAATGTAACACTTCACTG+CGG | 0.826513 | 2_1:+13656496 | Msa0196440:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAACCATTAATTCTTTTT+AGG | + | chr2_1:13654413-13654432 | Msa0196440:intron | 15.0% |
| !!! | AAAACCATTAATTCTTTTTA+GGG | + | chr2_1:13654414-13654433 | Msa0196440:intron | 15.0% |
| !! | CATTTAAAGAATAAAAAGAA+GGG | - | chr2_1:13654618-13654637 | None:intergenic | 15.0% |
| !! | TTATAAAATGCAATTTGATA+CGG | - | chr2_1:13656379-13656398 | None:intergenic | 15.0% |
| !! | GATGAAATAATTAATACATT+TGG | - | chr2_1:13656762-13656781 | None:intergenic | 15.0% |
| !!! | AACAGTATTTTTTTTTATGT+TGG | + | chr2_1:13656980-13656999 | Msa0196440:intron | 15.0% |
| !! | TTATTTACAACTTTATGAAA+TGG | - | chr2_1:13657028-13657047 | None:intergenic | 15.0% |
| !!! | TGTAAGAGAATATTTTTATT+TGG | + | chr2_1:13657658-13657677 | Msa0196440:three_prime_UTR | 15.0% |
| !!! | AATTTGAAACTAGAAGATAT+AGG | + | chr2_1:13653910-13653929 | Msa0196440:intron | 20.0% |
| !! | AAAAAAAAAAAAAGGGTTTG+AGG | - | chr2_1:13654389-13654408 | None:intergenic | 20.0% |
| !! | ATTTCCCTAAAAAGAATTAA+TGG | - | chr2_1:13654421-13654440 | None:intergenic | 20.0% |
| !!! | CAAGAAAAAAATTCTACTTT+TGG | - | chr2_1:13654478-13654497 | None:intergenic | 20.0% |
| !!! | CAAAAGTAGAATTTTTTTCT+TGG | + | chr2_1:13654476-13654495 | Msa0196440:intron | 20.0% |
| !! | GCATTTAAAGAATAAAAAGA+AGG | - | chr2_1:13654619-13654638 | None:intergenic | 20.0% |
| !!! | TTTTATTCTTTAAATGCCAA+AGG | + | chr2_1:13654622-13654641 | Msa0196440:intron | 20.0% |
| !! | ATTCAGAAAAAAGAAAAGAA+GGG | - | chr2_1:13654715-13654734 | None:intergenic | 20.0% |
| !!! | TTTTATATTGACAATCAAAC+AGG | - | chr2_1:13654899-13654918 | None:intergenic | 20.0% |
| !! | TTTGATTGTCAATATAAAAC+TGG | + | chr2_1:13654900-13654919 | Msa0196440:intron | 20.0% |
| !!! | AGTTTGATTTTGTTAACAAA+AGG | + | chr2_1:13655096-13655115 | Msa0196440:intron | 20.0% |
| !! | AACACAAAATTCATCATATT+AGG | + | chr2_1:13655121-13655140 | Msa0196440:intron | 20.0% |
| !!! | TTTTATTTTAGGAACATCAT+AGG | + | chr2_1:13655181-13655200 | Msa0196440:intron | 20.0% |
| !!! | AGTAACATTTTTTTACTCTA+TGG | - | chr2_1:13655415-13655434 | None:intergenic | 20.0% |
| !!! | AATATTATTTTATGCTAAGC+AGG | + | chr2_1:13655548-13655567 | Msa0196440:intron | 20.0% |
| !! | CTAGAAAAAAAATCATTGTT+AGG | + | chr2_1:13656117-13656136 | Msa0196440:CDS | 20.0% |
| !!! | AATCGCTTTTTAAATTTTGT+AGG | + | chr2_1:13656431-13656450 | Msa0196440:intron | 20.0% |
| !! | TCCTTCAATTAATTTAAGTA+AGG | + | chr2_1:13656729-13656748 | Msa0196440:intron | 20.0% |
| !! | ACCTTACTTAAATTAATTGA+AGG | - | chr2_1:13656733-13656752 | None:intergenic | 20.0% |
| !!! | TTTGATTGATTCTATATTCA+TGG | - | chr2_1:13656899-13656918 | None:intergenic | 20.0% |
| !! | TGTAAATAAACTTTCACTAA+AGG | + | chr2_1:13657039-13657058 | Msa0196440:intron | 20.0% |
| !!! | TTGTTTTTTGTCTATTCTTT+AGG | + | chr2_1:13657500-13657519 | Msa0196440:intron | 20.0% |
| !!! | TGTTTTTTGTCTATTCTTTA+GGG | + | chr2_1:13657501-13657520 | Msa0196440:intron | 20.0% |
| !! | ATGGAAAGCAATTTTTGTAT+TGG | + | chr2_1:13653849-13653868 | Msa0196440:intron | 25.0% |
| !! | TGGAAAGCAATTTTTGTATT+GGG | + | chr2_1:13653850-13653869 | Msa0196440:intron | 25.0% |
| ! | AAACAAACATGCAATCTAAA+TGG | - | chr2_1:13653955-13653974 | None:intergenic | 25.0% |
| !!! | TAGATTGCATGTTTGTTTTA+AGG | + | chr2_1:13653957-13653976 | Msa0196440:intron | 25.0% |
| !! | AACACTAAGAATCCATATTT+TGG | - | chr2_1:13653986-13654005 | None:intergenic | 25.0% |
| ! | AAATGCATAAACATGTTAGA+AGG | + | chr2_1:13654013-13654032 | Msa0196440:intron | 25.0% |
| ! | AATCATTGACCAAAGAATAA+GGG | - | chr2_1:13654071-13654090 | None:intergenic | 25.0% |
| !!! | AATGCGAATACTTTTTTTTG+AGG | - | chr2_1:13654108-13654127 | None:intergenic | 25.0% |
| ! | AAGAAAAGAAGGGAAATATT+TGG | - | chr2_1:13654705-13654724 | None:intergenic | 25.0% |
| ! | CATTCAGAAAAAAGAAAAGA+AGG | - | chr2_1:13654716-13654735 | None:intergenic | 25.0% |
| !!! | TTTCAAGTTTTCAATACCTT+TGG | + | chr2_1:13654985-13655004 | Msa0196440:intron | 25.0% |
| ! | TCAAAATCAATATCAACCAA+AGG | - | chr2_1:13655004-13655023 | None:intergenic | 25.0% |
| ! | ATTATTACACACATATGTGT+TGG | + | chr2_1:13655042-13655061 | Msa0196440:intron | 25.0% |
| ! | TCGACATATCATATATTTAG+CGG | - | chr2_1:13655319-13655338 | None:intergenic | 25.0% |
| ! | AGTAAAAAAATGTTACTGCT+GGG | + | chr2_1:13655418-13655437 | Msa0196440:intron | 25.0% |
| ! | AATGCAATTGAAAATTCGAA+TGG | + | chr2_1:13655465-13655484 | Msa0196440:intron | 25.0% |
| ! | ATGCAATTGAAAATTCGAAT+GGG | + | chr2_1:13655466-13655485 | Msa0196440:intron | 25.0% |
| ! | GGATCTTATAAACAAGAATT+GGG | + | chr2_1:13655487-13655506 | Msa0196440:intron | 25.0% |
| ! | GATCTTATAAACAAGAATTG+GGG | + | chr2_1:13655488-13655507 | Msa0196440:intron | 25.0% |
| ! | TGTGAATTAGATCAAACAAT+TGG | - | chr2_1:13655646-13655665 | None:intergenic | 25.0% |
| ! | CAAGAATTACAAAAGAAGTA+TGG | + | chr2_1:13655693-13655712 | Msa0196440:intron | 25.0% |
| ! | TGATGATAATAGCTAAAAAC+AGG | + | chr2_1:13655781-13655800 | Msa0196440:intron | 25.0% |
| ! | ATCAGATAATGTTGTCTATT+TGG | + | chr2_1:13655820-13655839 | Msa0196440:CDS | 25.0% |
| ! | ATTCAATAGAAATAAGAACG+CGG | - | chr2_1:13655895-13655914 | None:intergenic | 25.0% |
| !! | ATCTGATGTTTATTTGTTAC+AGG | + | chr2_1:13656251-13656270 | Msa0196440:intron | 25.0% |
| !! | ATTTCATCTTGACTATTTTC+AGG | + | chr2_1:13656774-13656793 | Msa0196440:intron | 25.0% |
| ! | AACTTTACAAAACATGTTGT+AGG | + | chr2_1:13656932-13656951 | Msa0196440:intron | 25.0% |
| ! | TTTATGAAATGGCTTCAAAA+TGG | - | chr2_1:13657017-13657036 | None:intergenic | 25.0% |
| ! | GAGTATATATTTGCAGATAA+TGG | + | chr2_1:13657566-13657585 | Msa0196440:CDS | 25.0% |
| !! | TTTGTATTGGGTATTGAAAG+AGG | + | chr2_1:13653862-13653881 | Msa0196440:intron | 30.0% |
| !! | GATATAGGTTCTAGAAAATG+TGG | + | chr2_1:13653925-13653944 | Msa0196440:intron | 30.0% |
| !!! | GTTTTAAGGCATCCAAAATA+TGG | + | chr2_1:13653971-13653990 | Msa0196440:intron | 30.0% |
| ATATTCAACCCCTTATTCTT+TGG | + | chr2_1:13654059-13654078 | Msa0196440:intron | 30.0% | |
| ATCATTGACCAAAGAATAAG+GGG | - | chr2_1:13654070-13654089 | None:intergenic | 30.0% | |
| GAATCATTGACCAAAGAATA+AGG | - | chr2_1:13654072-13654091 | None:intergenic | 30.0% | |
| !! | TTTTAGAAGTCTACCACTAA+TGG | + | chr2_1:13654126-13654145 | Msa0196440:intron | 30.0% |
| TTTAGAAGTCTACCACTAAT+GGG | + | chr2_1:13654127-13654146 | Msa0196440:intron | 30.0% | |
| TTGTTACATTTACCCATTAG+TGG | - | chr2_1:13654142-13654161 | None:intergenic | 30.0% | |
| TTGAGTTTCATTCAAAGACT+TGG | - | chr2_1:13654819-13654838 | None:intergenic | 30.0% | |
| GTCTTTGAATGAAACTCAAA+AGG | + | chr2_1:13654820-13654839 | Msa0196440:CDS | 30.0% | |
| TGCTATAAATTTCTCTCAAG+TGG | + | chr2_1:13654844-13654863 | Msa0196440:CDS | 30.0% | |
| AACAGGAGAATACATACATT+TGG | - | chr2_1:13654882-13654901 | None:intergenic | 30.0% | |
| ACAAAAACACACAAACACAA+AGG | - | chr2_1:13654956-13654975 | None:intergenic | 30.0% | |
| GAGTAAAAAAATGTTACTGC+TGG | + | chr2_1:13655417-13655436 | Msa0196440:intron | 30.0% | |
| GTAAAAAAATGTTACTGCTG+GGG | + | chr2_1:13655419-13655438 | Msa0196440:intron | 30.0% | |
| GGGATCTTATAAACAAGAAT+TGG | + | chr2_1:13655486-13655505 | Msa0196440:intron | 30.0% | |
| ! | TCAAGAGGGTCTTATATTTA+AGG | + | chr2_1:13655517-13655536 | Msa0196440:intron | 30.0% |
| !! | CTTCTGTTGATTCTTATATG+TGG | + | chr2_1:13655581-13655600 | Msa0196440:intron | 30.0% |
| ! | ATGTTGTCTATTTGGAGTTA+AGG | + | chr2_1:13655828-13655847 | Msa0196440:CDS | 30.0% |
| AATTACACAATGATCTGCAT+TGG | - | chr2_1:13655870-13655889 | None:intergenic | 30.0% | |
| ATTCAGAGAAACGATTCAAT+TGG | + | chr2_1:13655966-13655985 | Msa0196440:intron | 30.0% | |
| !!! | ATTTTAGAATCTCCAGTCTT+TGG | - | chr2_1:13656068-13656087 | None:intergenic | 30.0% |
| CCATTGCATTTATCATTGTT+AGG | - | chr2_1:13656092-13656111 | None:intergenic | 30.0% | |
| CCTAACAATGATAAATGCAA+TGG | + | chr2_1:13656089-13656108 | Msa0196440:CDS | 30.0% | |
| CATATTGATATACCATTCAC+CGG | - | chr2_1:13656343-13656362 | None:intergenic | 30.0% | |
| !! | GTTGAAGTCTTCTAAAATTC+CGG | + | chr2_1:13656690-13656709 | Msa0196440:CDS | 30.0% |
| TTTGTTTGACATCAAACATC+AGG | + | chr2_1:13656803-13656822 | Msa0196440:CDS | 30.0% | |
| AGCAAAAGAACATACCAAAA+TGG | - | chr2_1:13656858-13656877 | None:intergenic | 30.0% | |
| ! | TTGGTATGTTCTTTTGCTTA+TGG | + | chr2_1:13656860-13656879 | Msa0196440:intron | 30.0% |
| TTCAACAAGTAGTTCATGTT+TGG | + | chr2_1:13657068-13657087 | Msa0196440:intron | 30.0% | |
| !! | AAATATGCTGCTGATTCATT+TGG | + | chr2_1:13657412-13657431 | Msa0196440:CDS | 30.0% |
| !!! | TTTTGTCTATTCTTTAGGGT+TGG | + | chr2_1:13657505-13657524 | Msa0196440:intron | 30.0% |
| !! | TTTGTCTATTCTTTAGGGTT+GGG | + | chr2_1:13657506-13657525 | Msa0196440:intron | 30.0% |
| ! | TAATTCAGTGTCGAAGAATA+TGG | + | chr2_1:13657616-13657635 | Msa0196440:CDS | 30.0% |
| ACGGGTAAGTATATGAGAAT+AGG | + | chr2_1:13653766-13653785 | Msa0196440:CDS | 35.0% | |
| CGGGTAAGTATATGAGAATA+GGG | + | chr2_1:13653767-13653786 | Msa0196440:CDS | 35.0% | |
| GGGTAAGTATATGAGAATAG+GGG | + | chr2_1:13653768-13653787 | Msa0196440:CDS | 35.0% | |
| AAGTATATGAGAATAGGGGA+TGG | + | chr2_1:13653772-13653791 | Msa0196440:CDS | 35.0% | |
| AGTATATGAGAATAGGGGAT+GGG | + | chr2_1:13653773-13653792 | Msa0196440:CDS | 35.0% | |
| CAAAATCACTGTTCTGACTT+AGG | - | chr2_1:13653826-13653845 | None:intergenic | 35.0% | |
| ! | CTAAGTCAGAACAGTGATTT+TGG | + | chr2_1:13653824-13653843 | Msa0196440:intron | 35.0% |
| TGCATAAACATGTTAGAAGG+TGG | + | chr2_1:13654016-13654035 | Msa0196440:intron | 35.0% | |
| TGATGTTGACACATTGCATA+AGG | + | chr2_1:13654184-13654203 | Msa0196440:intron | 35.0% | |
| TAACTGCCGAATTATGAAAC+CGG | + | chr2_1:13654249-13654268 | Msa0196440:intron | 35.0% | |
| TTAACTACCGAGGAAAACTT+CGG | + | chr2_1:13654278-13654297 | Msa0196440:intron | 35.0% | |
| ! | CCGAAGTTTTCAATTTTCCT+CGG | - | chr2_1:13654314-13654333 | None:intergenic | 35.0% |
| CCGAGGAAAATTGAAAACTT+CGG | + | chr2_1:13654311-13654330 | Msa0196440:intron | 35.0% | |
| ! | CCGAAGTTTTCAATTTTCCT+CGG | - | chr2_1:13654314-13654333 | None:intergenic | 35.0% |
| CCGAGGAAAATTGAAAACTT+CGG | + | chr2_1:13654311-13654330 | Msa0196440:intron | 35.0% | |
| !! | AAATGTTAACTTGTGCCCTT+GGG | + | chr2_1:13654437-13654456 | Msa0196440:intron | 35.0% |
| AAGACACAAAGACAAAGGTT+AGG | - | chr2_1:13655068-13655087 | None:intergenic | 35.0% | |
| AACACAAGACACAAAGACAA+AGG | - | chr2_1:13655073-13655092 | None:intergenic | 35.0% | |
| CAAAACATGACATGACTACT+TGG | + | chr2_1:13655229-13655248 | Msa0196440:intron | 35.0% | |
| ! | ATCATATATTTAGCGGACAG+AGG | - | chr2_1:13655312-13655331 | None:intergenic | 35.0% |
| AATTGGGGAAAATCTCAAGA+GGG | + | chr2_1:13655503-13655522 | Msa0196440:intron | 35.0% | |
| AGAATCAACAGAAGCAGATT+AGG | - | chr2_1:13655575-13655594 | None:intergenic | 35.0% | |
| TATTACAGATGAGCTTACAC+TGG | + | chr2_1:13655610-13655629 | Msa0196440:intron | 35.0% | |
| TAGCTAAAAACAGGTCATTG+AGG | + | chr2_1:13655790-13655809 | Msa0196440:intron | 35.0% | |
| TATGTTGACGCTGTAATTGA+AGG | + | chr2_1:13656005-13656024 | Msa0196440:CDS | 35.0% | |
| !!! | ATATACCATTCACCGGTTTT+TGG | - | chr2_1:13656336-13656355 | None:intergenic | 35.0% |
| CTTAATGTAACACTTCACTG+CGG | + | chr2_1:13656496-13656515 | Msa0196440:CDS | 35.0% | |
| ! | ATTGCGTATCTAAAACCACA+AGG | - | chr2_1:13656587-13656606 | None:intergenic | 35.0% |
| !! | GTTTTAGATACGCAATTCGA+AGG | + | chr2_1:13656591-13656610 | Msa0196440:intron | 35.0% |
| ! | GTTACTTTGAAGATGAACAC+TGG | + | chr2_1:13656662-13656681 | Msa0196440:CDS | 35.0% |
| ! | GCTATAGAAGTTCACCATTT+TGG | + | chr2_1:13656841-13656860 | Msa0196440:CDS | 35.0% |
| CTTCTGTACATGTTAAGTGT+AGG | + | chr2_1:13657238-13657257 | Msa0196440:intron | 35.0% | |
| CAAGAACATTGTGTTAAGAG+AGG | - | chr2_1:13657300-13657319 | None:intergenic | 35.0% | |
| CTCTCTTAACACAATGTTCT+TGG | + | chr2_1:13657298-13657317 | Msa0196440:intron | 35.0% | |
| TCATCAGTACATAGGACTAA+AGG | - | chr2_1:13657355-13657374 | None:intergenic | 35.0% | |
| ATTCAATACAAGTCTCTCTG+AGG | + | chr2_1:13657384-13657403 | Msa0196440:CDS | 35.0% | |
| GGGAAATGTTTGAACTATCA+AGG | + | chr2_1:13657534-13657553 | Msa0196440:CDS | 35.0% | |
| CATATGACTATATGTCAGTC+AGG | + | chr2_1:13657683-13657702 | Msa0196440:three_prime_UTR | 35.0% | |
| GTATATGAGAATAGGGGATG+GGG | + | chr2_1:13653774-13653793 | Msa0196440:CDS | 40.0% | |
| !! | CAGAACAGTGATTTTGGTCA+TGG | + | chr2_1:13653830-13653849 | Msa0196440:intron | 40.0% |
| GAAAGAGGTCATGAGTACAA+AGG | + | chr2_1:13653877-13653896 | Msa0196440:intron | 40.0% | |
| ! | AAAATACGTTTTTGCCCCCT+CGG | + | chr2_1:13654222-13654241 | Msa0196440:intron | 40.0% |
| ! | CTGCAACCGGTTTCATAATT+CGG | - | chr2_1:13654258-13654277 | None:intergenic | 40.0% |
| ! | TTAACTGCCGAAGTTTTCCT+CGG | - | chr2_1:13654288-13654307 | None:intergenic | 40.0% |
| AAAAGGGTTTGAGGATTCCT+CGG | - | chr2_1:13654380-13654399 | None:intergenic | 40.0% | |
| !! | GAAATGTTAACTTGTGCCCT+TGG | + | chr2_1:13654436-13654455 | Msa0196440:intron | 40.0% |
| !! | AATGTTAACTTGTGCCCTTG+GGG | + | chr2_1:13654438-13654457 | Msa0196440:intron | 40.0% |
| TTCCTTAACTTATGCCCCAA+GGG | - | chr2_1:13654455-13654474 | None:intergenic | 40.0% | |
| !! | TTCCTTAACTTGTGCCCTTA+GGG | + | chr2_1:13654577-13654596 | Msa0196440:intron | 40.0% |
| !! | CATGTTAACTTGTGCCCTAA+GGG | - | chr2_1:13654594-13654613 | None:intergenic | 40.0% |
| !! | TCATGTTAACTTGTGCCCTA+AGG | - | chr2_1:13654595-13654614 | None:intergenic | 40.0% |
| AGACTCTGATAGAACCATTG+AGG | - | chr2_1:13654664-13654683 | None:intergenic | 40.0% | |
| GAATTGGGGAAAATCTCAAG+AGG | + | chr2_1:13655502-13655521 | Msa0196440:intron | 40.0% | |
| !! | TGATCTGCATTGGTTACCTT+TGG | - | chr2_1:13655860-13655879 | None:intergenic | 40.0% |
| GTGGATTTCATTCCAAAGAC+TGG | + | chr2_1:13656053-13656072 | Msa0196440:CDS | 40.0% | |
| !! | TAGCTGCTTCTGTTGTTTCT+CGG | - | chr2_1:13656163-13656182 | None:intergenic | 40.0% |
| AGAAACAACAGAAGCAGCTA+TGG | + | chr2_1:13656163-13656182 | Msa0196440:CDS | 40.0% | |
| TCAAGCTTGCACTAGAAATG+AGG | + | chr2_1:13656274-13656293 | Msa0196440:CDS | 40.0% | |
| ! | GCACTAGAAATGAGGCATTT+AGG | + | chr2_1:13656282-13656301 | Msa0196440:CDS | 40.0% |
| ! | ATGAGGCATTTAGGTGTAGT+TGG | + | chr2_1:13656291-13656310 | Msa0196440:CDS | 40.0% |
| GTAGTTGGAATTGATCTCTC+TGG | + | chr2_1:13656306-13656325 | Msa0196440:CDS | 40.0% | |
| ! | CTCTCTGGAAATCCAAAAAC+CGG | + | chr2_1:13656321-13656340 | Msa0196440:CDS | 40.0% |
| GAAATCCAAAAACCGGTGAA+TGG | + | chr2_1:13656328-13656347 | Msa0196440:CDS | 40.0% | |
| GGTTTATTCTTCTGACCTTG+TGG | + | chr2_1:13656569-13656588 | Msa0196440:intron | 40.0% | |
| TGCTTGAATTTCATCCGCAA+AGG | + | chr2_1:13656626-13656645 | Msa0196440:CDS | 40.0% | |
| GAATTTCATCCGCAAAGGAT+TGG | + | chr2_1:13656631-13656650 | Msa0196440:CDS | 40.0% | |
| TCATGCAGCTTATTTGTACG+AGG | + | chr2_1:13657321-13657340 | Msa0196440:intron | 40.0% | |
| CACATGTGTCATCAGTACAT+AGG | - | chr2_1:13657363-13657382 | None:intergenic | 40.0% | |
| !! | ATGCTGCTGATTCATTTGGT+AGG | + | chr2_1:13657416-13657435 | Msa0196440:intron | 40.0% |
| !! | TCTATTCTTTAGGGTTGGGA+AGG | + | chr2_1:13657510-13657529 | Msa0196440:intron | 40.0% |
| TGAACTATCAAGGAATGCTG+TGG | + | chr2_1:13657544-13657563 | Msa0196440:CDS | 40.0% | |
| TTCGATTTCTCATCCCCGTT+GGG | + | chr2_1:13653730-13653749 | Msa0196440:CDS | 45.0% | |
| TCTGACTTAGGCATGGCAAT+GGG | - | chr2_1:13653814-13653833 | None:intergenic | 45.0% | |
| TTCTGACTTAGGCATGGCAA+TGG | - | chr2_1:13653815-13653834 | None:intergenic | 45.0% | |
| TCACTGTTCTGACTTAGGCA+TGG | - | chr2_1:13653821-13653840 | None:intergenic | 45.0% | |
| TGACACATTGCATAAGGCTG+TGG | + | chr2_1:13654190-13654209 | Msa0196440:intron | 45.0% | |
| GTTCCTTAACTTATGCCCCA+AGG | - | chr2_1:13654456-13654475 | None:intergenic | 45.0% | |
| !! | GTTCCTTAACTTGTGCCCTT+AGG | + | chr2_1:13654576-13654595 | Msa0196440:intron | 45.0% |
| TGAGCATGCAGTTCAACCTT+TGG | - | chr2_1:13654641-13654660 | None:intergenic | 45.0% | |
| TGTTACTGCTGGGGATATGT+TGG | + | chr2_1:13655428-13655447 | Msa0196440:intron | 45.0% | |
| GGAGTTAAGGACTACTCCAA+AGG | + | chr2_1:13655841-13655860 | Msa0196440:CDS | 45.0% | |
| AGGCGTAAGATCAGTTAGCT+CGG | + | chr2_1:13656025-13656044 | Msa0196440:CDS | 45.0% | |
| CTGAAATTCGCACGAGAACA+AGG | + | chr2_1:13656472-13656491 | Msa0196440:CDS | 45.0% | |
| CAAGCATGTCCAATCCTTTG+CGG | - | chr2_1:13656643-13656662 | None:intergenic | 45.0% | |
| GGAGCATGCAAAAGTCTAAC+CGG | - | chr2_1:13656712-13656731 | None:intergenic | 45.0% | |
| !! | ATTCTTTAGGGTTGGGAAGG+TGG | + | chr2_1:13657513-13657532 | Msa0196440:intron | 45.0% |
| !! | TTCTTTAGGGTTGGGAAGGT+GGG | + | chr2_1:13657514-13657533 | Msa0196440:intron | 45.0% |
| !! | TTTGTAAAAAAAAAAAAAAA+GGG | - | chr2_1:13654396-13654415 | None:intergenic | 5.0% |
| !!! | TTTTGTAAAAAAAAAAAAAA+AGG | - | chr2_1:13654397-13654416 | None:intergenic | 5.0% |
| !!! | AATTATTATACTTTTATTTT+AGG | + | chr2_1:13655170-13655189 | Msa0196440:intron | 5.0% |
| GTTCGATTTCTCATCCCCGT+TGG | + | chr2_1:13653729-13653748 | Msa0196440:CDS | 50.0% | |
| TTTCTCATCCCCGTTGGGTA+TGG | + | chr2_1:13653735-13653754 | Msa0196440:CDS | 50.0% | |
| TTCTCATCCCCGTTGGGTAT+GGG | + | chr2_1:13653736-13653755 | Msa0196440:CDS | 50.0% | |
| TTACCCTACCCATACCCAAC+GGG | - | chr2_1:13653747-13653766 | None:intergenic | 50.0% | |
| GTTACCCTACCCATACCCAA+CGG | - | chr2_1:13653748-13653767 | None:intergenic | 50.0% | |
| GTTGGGTATGGGTAGGGTAA+CGG | + | chr2_1:13653747-13653766 | Msa0196440:CDS | 50.0% | |
| TTGGGTATGGGTAGGGTAAC+GGG | + | chr2_1:13653748-13653767 | Msa0196440:CDS | 50.0% | |
| ATGAGAATAGGGGATGGGGA+AGG | + | chr2_1:13653778-13653797 | Msa0196440:CDS | 50.0% | |
| CTGACTTAGGCATGGCAATG+GGG | - | chr2_1:13653813-13653832 | None:intergenic | 50.0% | |
| ATTCGGCAGTTAACTGCCGA+GGG | - | chr2_1:13654241-13654260 | None:intergenic | 50.0% | |
| AATTCGGCAGTTAACTGCCG+AGG | - | chr2_1:13654242-13654261 | None:intergenic | 50.0% | |
| CCTCGGTAGTTAACTGCAAC+CGG | - | chr2_1:13654271-13654290 | None:intergenic | 50.0% | |
| ACTTCGGCAGTTAACTACCG+AGG | + | chr2_1:13654294-13654313 | Msa0196440:intron | 50.0% | |
| ACTTCGGCAGTTAACTACCG+AGG | + | chr2_1:13654294-13654313 | Msa0196440:intron | 50.0% | |
| TGCCCTTGGGGCATAAGTTA+AGG | + | chr2_1:13654450-13654469 | Msa0196440:intron | 50.0% | |
| ! | TGCCCTAAGGGCACAAGTTA+AGG | - | chr2_1:13654582-13654601 | None:intergenic | 50.0% |
| GAACTGCATGCTCACCTCAA+TGG | + | chr2_1:13654647-13654666 | Msa0196440:intron | 50.0% | |
| ATCAGTTAGCTCGGTCGATG+TGG | + | chr2_1:13656034-13656053 | Msa0196440:CDS | 50.0% | |
| !! | CTGCTTCTGTTGTTTCTCGG+CGG | - | chr2_1:13656160-13656179 | None:intergenic | 50.0% |
| TCTCGTGCGAATTTCAGTGC+TGG | - | chr2_1:13656469-13656488 | None:intergenic | 50.0% | |
| TGTAACACTTCACTGCGGAG+AGG | + | chr2_1:13656501-13656520 | Msa0196440:CDS | 50.0% | |
| GTTCTGATCAGTTTCGCGAC+TGG | + | chr2_1:13656548-13656567 | Msa0196440:intron | 50.0% | |
| ATCCCCGTTGGGTATGGGTA+GGG | + | chr2_1:13653741-13653760 | Msa0196440:CDS | 55.0% | |
| TACCCTACCCATACCCAACG+GGG | - | chr2_1:13653746-13653765 | None:intergenic | 55.0% | |
| ACTTAGGCATGGCAATGGGG+CGG | - | chr2_1:13653810-13653829 | None:intergenic | 55.0% | |
| TTCGGCAGTTAACTGCCGAG+GGG | - | chr2_1:13654362-13654381 | None:intergenic | 55.0% | |
| CCGGTTGCAGTTAACTACCG+AGG | + | chr2_1:13654268-13654287 | Msa0196440:intron | 55.0% | |
| ACTTCGGCAGTTAACTGCCG+AGG | + | chr2_1:13654360-13654379 | Msa0196440:intron | 55.0% | |
| CATCCCCGTTGGGTATGGGT+AGG | + | chr2_1:13653740-13653759 | Msa0196440:CDS | 60.0% | |
| CTTAGGCATGGCAATGGGGC+GGG | - | chr2_1:13653809-13653828 | None:intergenic | 60.0% | |
| TCGGCAGTTAACTGCCGAGG+GGG | - | chr2_1:13654363-13654382 | None:intergenic | 60.0% | |
| GATGGGATCCCCGAACCCGT+CGG | + | chr2_1:13653693-13653712 | Msa0196440:CDS | 65.0% | |
| ATGGGATCCCCGAACCCGTC+GGG | + | chr2_1:13653694-13653713 | Msa0196440:CDS | 65.0% | |
| ! | ATCCCTGTCCCCGACGGGTT+CGG | - | chr2_1:13653706-13653725 | None:intergenic | 65.0% |
| AACCCGTCGGGGACAGGGAT+GGG | + | chr2_1:13653706-13653725 | Msa0196440:CDS | 65.0% | |
| AACCCCATCCCTGTCCCCGA+CGG | - | chr2_1:13653712-13653731 | None:intergenic | 65.0% | |
| TGGGATCCCCGAACCCGTCG+GGG | + | chr2_1:13653695-13653714 | Msa0196440:CDS | 70.0% | |
| ! | TCCCTGTCCCCGACGGGTTC+GGG | - | chr2_1:13653705-13653724 | None:intergenic | 70.0% |
| GAACCCGTCGGGGACAGGGA+TGG | + | chr2_1:13653705-13653724 | Msa0196440:CDS | 70.0% | |
| ACCCGTCGGGGACAGGGATG+GGG | + | chr2_1:13653707-13653726 | Msa0196440:CDS | 70.0% | |
| ACCCCATCCCTGTCCCCGAC+GGG | - | chr2_1:13653711-13653730 | None:intergenic | 70.0% | |
| TCCCCGAACCCGTCGGGGAC+AGG | + | chr2_1:13653700-13653719 | Msa0196440:CDS | 75.0% | |
| ! | CCCTGTCCCCGACGGGTTCG+GGG | - | chr2_1:13653704-13653723 | None:intergenic | 75.0% |
| CCCCGAACCCGTCGGGGACA+GGG | + | chr2_1:13653701-13653720 | Msa0196440:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 13653688 | 13657754 | 13653688 | ID=Msa0196440;Name=Msa0196440 |
| chr2_1 | mRNA | 13653688 | 13657754 | 13653688 | ID=Msa0196440-mRNA-1;Parent=Msa0196440;Name=Msa0196440-mRNA-1;_AED=0.25;_eAED=0.25;_QI=0|0.9|0.90|0.90|1|1|11|108|384 |
| chr2_1 | exon | 13653688 | 13653836 | 13653688 | ID=Msa0196440-mRNA-1:exon:5900;Parent=Msa0196440-mRNA-1 |
| chr2_1 | exon | 13654808 | 13654884 | 13654808 | ID=Msa0196440-mRNA-1:exon:5901;Parent=Msa0196440-mRNA-1 |
| chr2_1 | exon | 13655618 | 13655709 | 13655618 | ID=Msa0196440-mRNA-1:exon:5902;Parent=Msa0196440-mRNA-1 |
| chr2_1 | exon | 13655803 | 13655862 | 13655803 | ID=Msa0196440-mRNA-1:exon:5903;Parent=Msa0196440-mRNA-1 |
| chr2_1 | exon | 13655972 | 13656190 | 13655972 | ID=Msa0196440-mRNA-1:exon:5904;Parent=Msa0196440-mRNA-1 |
| chr2_1 | exon | 13656273 | 13656349 | 13656273 | ID=Msa0196440-mRNA-1:exon:5905;Parent=Msa0196440-mRNA-1 |
| chr2_1 | exon | 13656453 | 13656522 | 13656453 | ID=Msa0196440-mRNA-1:exon:5906;Parent=Msa0196440-mRNA-1 |
| chr2_1 | exon | 13656598 | 13656711 | 13656598 | ID=Msa0196440-mRNA-1:exon:5907;Parent=Msa0196440-mRNA-1 |
| chr2_1 | exon | 13656796 | 13656862 | 13656796 | ID=Msa0196440-mRNA-1:exon:5908;Parent=Msa0196440-mRNA-1 |
| chr2_1 | exon | 13657329 | 13657433 | 13657329 | ID=Msa0196440-mRNA-1:exon:5909;Parent=Msa0196440-mRNA-1 |
| chr2_1 | exon | 13657522 | 13657754 | 13657522 | ID=Msa0196440-mRNA-1:exon:5910;Parent=Msa0196440-mRNA-1 |
| chr2_1 | CDS | 13653688 | 13653836 | 13653688 | ID=Msa0196440-mRNA-1:cds;Parent=Msa0196440-mRNA-1 |
| chr2_1 | CDS | 13654808 | 13654884 | 13654808 | ID=Msa0196440-mRNA-1:cds;Parent=Msa0196440-mRNA-1 |
| chr2_1 | CDS | 13655618 | 13655709 | 13655618 | ID=Msa0196440-mRNA-1:cds;Parent=Msa0196440-mRNA-1 |
| chr2_1 | CDS | 13655803 | 13655862 | 13655803 | ID=Msa0196440-mRNA-1:cds;Parent=Msa0196440-mRNA-1 |
| chr2_1 | CDS | 13655972 | 13656190 | 13655972 | ID=Msa0196440-mRNA-1:cds;Parent=Msa0196440-mRNA-1 |
| chr2_1 | CDS | 13656273 | 13656349 | 13656273 | ID=Msa0196440-mRNA-1:cds;Parent=Msa0196440-mRNA-1 |
| chr2_1 | CDS | 13656453 | 13656522 | 13656453 | ID=Msa0196440-mRNA-1:cds;Parent=Msa0196440-mRNA-1 |
| chr2_1 | CDS | 13656598 | 13656711 | 13656598 | ID=Msa0196440-mRNA-1:cds;Parent=Msa0196440-mRNA-1 |
| chr2_1 | CDS | 13656796 | 13656862 | 13656796 | ID=Msa0196440-mRNA-1:cds;Parent=Msa0196440-mRNA-1 |
| chr2_1 | CDS | 13657329 | 13657433 | 13657329 | ID=Msa0196440-mRNA-1:cds;Parent=Msa0196440-mRNA-1 |
| chr2_1 | CDS | 13657522 | 13657646 | 13657522 | ID=Msa0196440-mRNA-1:cds;Parent=Msa0196440-mRNA-1 |
| chr2_1 | three_prime_UTR | 13657647 | 13657754 | 13657647 | ID=Msa0196440-mRNA-1:three_prime_utr;Parent=Msa0196440-mRNA-1 |
| Gene Sequence |
| Protein sequence |
