AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0145110

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0145110 MtrunA17_Chr1g0149561 97.179 709 19 1 1 709 1 708 0.0 1429
Msa0145110 MtrunA17_Chr4g0075481 36.207 754 371 14 1 659 1 739 2.62e-144 440
Msa0145110 MtrunA17_Chr2g0289351 37.642 441 196 10 251 662 50 440 5.53e-89 286
Msa0145110 MtrunA17_Chr2g0304261 57.377 183 73 3 6 185 2 182 1.42e-60 216
Msa0145110 MtrunA17_Chr7g0237741 31.646 158 93 5 7 152 52 206 4.42e-16 79.0
Msa0145110 MtrunA17_Chr2g0323971 33.913 115 70 4 41 152 98 209 5.91e-14 72.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0145110 AT2G25290.2 59.164 742 264 15 1 707 1 738 0.0 832
Msa0145110 AT2G25290.3 59.164 742 264 15 1 707 1 738 0.0 832
Msa0145110 AT2G25290.4 59.164 742 264 15 1 707 1 738 0.0 832
Msa0145110 AT2G25290.1 59.164 742 264 15 1 707 1 738 0.0 832
Msa0145110 AT4G32070.2 55.357 784 264 18 1 707 1 775 0.0 808
Msa0145110 AT4G32070.1 55.357 784 264 18 1 707 1 775 0.0 808
Msa0145110 AT5G20360.5 39.623 689 385 13 38 705 33 711 1.29e-163 488
Msa0145110 AT5G20360.6 39.623 689 385 13 38 705 33 711 1.29e-163 488
Msa0145110 AT5G20360.7 39.623 689 385 13 38 705 63 741 2.63e-163 489
Msa0145110 AT5G20360.4 39.623 689 385 13 38 705 63 741 2.63e-163 489
Msa0145110 AT5G20360.3 39.623 689 385 13 38 705 113 791 1.73e-162 488
Msa0145110 AT5G20360.1 39.623 689 385 13 38 705 123 801 2.92e-162 488
Msa0145110 AT5G20360.2 39.623 689 385 13 38 705 123 801 2.92e-162 488
Msa0145110 AT1G62390.1 37.464 702 366 10 31 662 41 739 1.60e-145 443
Msa0145110 AT3G58620.2 36.885 122 70 3 45 166 453 567 4.18e-12 70.1
Msa0145110 AT3G58620.1 36.885 122 70 3 45 166 453 567 4.71e-12 69.7
Msa0145110 AT4G30480.2 34.532 139 78 4 41 169 105 240 1.08e-11 66.6

Find 217 sgRNAs with CRISPR-Local

Find 357 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGCTTTGGCTTTGTTTAAT+TGG 0.077180 1_4:-4734364 Msa0145110:CDS
TGCTTTGGCTTTGTTTAATT+GGG 0.159575 1_4:-4734363 Msa0145110:CDS
TAATGCACAGTTAGAGAAAA+TGG 0.163980 1_4:-4733961 Msa0145110:CDS
TTCTTGTTGTTGTTTGATTT+TGG 0.181726 1_4:+4735640 None:intergenic
GGCGTTGAATCGGTTGGATT+TGG 0.260217 1_4:-4735299 Msa0145110:CDS
GGATAGGTATCCGGGGTTAA+AGG 0.285842 1_4:-4734804 Msa0145110:CDS
CGCGGTTTAGGAAAGTTGTT+AGG 0.290109 1_4:-4735117 Msa0145110:CDS
ACAATAAGGTGCCCCATAAA+AGG 0.298701 1_4:+4733862 None:intergenic
GTGGCTGTTGTGTGTAGGTT+AGG 0.301436 1_4:+4735873 None:intergenic
GCAGAGGACAGCATGGAAAA+AGG 0.303320 1_4:-4734047 Msa0145110:CDS
GTATATTACGCAGGTGGATT+TGG 0.303895 1_4:-4734675 Msa0145110:CDS
AAAATATTGAAGAATAAAAT+AGG 0.304235 1_4:+4733408 None:intergenic
GTTTGATTCTGATTCGTATC+TGG 0.333235 1_4:-4734498 Msa0145110:CDS
ATAAGGGTGTTGGGGCTAAT+AGG 0.333240 1_4:-4734580 Msa0145110:CDS
TTTGGCTTGTCATTCTTTAG+AGG 0.335912 1_4:-4733444 Msa0145110:three_prime_UTR
TACGCAGGTGGATTTGGATA+TGG 0.341945 1_4:-4734669 Msa0145110:CDS
GTGAGGTGAGAGGGGAGAAT+GGG 0.343540 1_4:-4734616 Msa0145110:CDS
TTATACAATTCTATTTCTTC+CGG 0.343726 1_4:-4731590 Msa0145110:three_prime_UTR
GATGGATTGGAGGGTGTAAA+AGG 0.344106 1_4:+4735934 None:intergenic
GGGGAATGTTCACTTGTCTA+AGG 0.350249 1_4:-4734342 Msa0145110:CDS
TGATAGTTTGAGGATTACTA+TGG 0.351621 1_4:-4735212 Msa0145110:CDS
TCATTACAACTTCATTCATT+TGG 0.352394 1_4:-4735842 Msa0145110:five_prime_UTR
GATTCCATTTGTTGGTTTGA+AGG 0.352952 1_4:-4731704 Msa0145110:three_prime_UTR
AGTATTTGATTTGCCATTAG+AGG 0.355207 1_4:-4731770 Msa0145110:three_prime_UTR
CAGTATATGATTCCATTTGT+TGG 0.356548 1_4:-4731712 Msa0145110:three_prime_UTR
TAAGGATAGGGAAGGTGATT+TGG 0.357323 1_4:-4734765 Msa0145110:CDS
AGCCGCCTGCTGCGCGGTTT+AGG 0.357668 1_4:-4735129 Msa0145110:CDS
GTTTCAAGAGATGGCTGCTT+TGG 0.361028 1_4:-4734378 Msa0145110:CDS
TCCAACGCAGTTGAATTATT+CGG 0.366515 1_4:+4735241 None:intergenic
TATTAGATGGGCGCAGTTGC+CGG 0.370574 1_4:-4734864 Msa0145110:CDS
GGGTGTTCTTGTGAAGTATA+AGG 0.372992 1_4:-4734783 Msa0145110:CDS
ACCAACATGGGAGGAATGTT+TGG 0.374580 1_4:-4733805 Msa0145110:CDS
GGCCATGTGTTATATGCAAT+TGG 0.379545 1_4:-4735422 Msa0145110:CDS
AAGAAGAAGAAAGGGCATAA+AGG 0.384960 1_4:-4735082 Msa0145110:CDS
TTCTGAAGAAGCTGAAGATC+AGG 0.386284 1_4:-4733910 Msa0145110:CDS
AGGACTGTGAAGTTGATATA+TGG 0.388536 1_4:-4734893 Msa0145110:CDS
GGATAGTAACGAAGTTGTTA+AGG 0.389904 1_4:-4734933 Msa0145110:CDS
GGCTGTTTAAGAACCATGTT+GGG 0.393596 1_4:-4734520 Msa0145110:CDS
TATATGGAGAGGATATTAGA+TGG 0.397585 1_4:-4734877 Msa0145110:CDS
ATGGGCTACGAAGGAGTATA+AGG 0.401726 1_4:-4734246 Msa0145110:CDS
AAGATTAATAAGAAGAAGAA+AGG 0.408833 1_4:-4735091 Msa0145110:CDS
GAGAAGGAGATAAGGGTGTT+GGG 0.411879 1_4:-4734589 Msa0145110:CDS
TGGCTGTTGTGTGTAGGTTA+GGG 0.412914 1_4:+4735874 None:intergenic
TGAGTAGTGGTGAGGTGAGA+GGG 0.413021 1_4:-4734625 Msa0145110:CDS
TACGAGGGACTCCTAGCTCT+TGG 0.413739 1_4:-4734176 Msa0145110:CDS
TGATGAGACTGAGATTGCTT+TGG 0.414076 1_4:-4735170 Msa0145110:CDS
AACAGAACGCTCATACAATA+AGG 0.415328 1_4:+4733848 None:intergenic
CTTACTCACCTGCCTTTGAA+TGG 0.416578 1_4:+4733371 None:intergenic
GGTGAGGTGAGAGGGGAGAA+TGG 0.419918 1_4:-4734617 Msa0145110:CDS
GTGAGAGGGGAGAATGGGGT+TGG 0.422494 1_4:-4734611 Msa0145110:CDS
ATTGAGGAACAGCGTTTGAA+TGG 0.424825 1_4:-4734005 Msa0145110:CDS
GGGGAGAATGGGGTTGGAGA+AGG 0.425637 1_4:-4734605 Msa0145110:CDS
AAATGTTAATGTTAATGTTA+AGG 0.428883 1_4:-4734999 Msa0145110:CDS
TGGAGATTCTTGATAGTTTG+AGG 0.428936 1_4:-4735222 Msa0145110:CDS
AGCTGCAGAACCTCCTCAAA+AGG 0.429826 1_4:+4734080 None:intergenic
GATACTAGGATTAGAAAGAT+TGG 0.430226 1_4:-4731797 Msa0145110:three_prime_UTR
TGTGATAAGGGATAGGTATC+CGG 0.440872 1_4:-4734813 Msa0145110:CDS
AAAATTGTTCCAGGATGTAA+TGG 0.443210 1_4:+4733473 None:intergenic
GAAGGATAAGGTTACGGATA+AGG 0.446110 1_4:-4734960 Msa0145110:CDS
CTCGACCCGTCTTCCTGAAA+AGG 0.446613 1_4:+4734305 None:intergenic
ATCTGGATATTCATGAGGTT+GGG 0.451158 1_4:-4734481 Msa0145110:CDS
GGTTGGGATGAAGATATATT+CGG 0.451414 1_4:-4734465 Msa0145110:CDS
TGGGGTTGGAGAAGGAGATA+AGG 0.452188 1_4:-4734597 Msa0145110:CDS
TGTTATATGCAATTGGGTCT+TGG 0.453077 1_4:-4735415 Msa0145110:CDS
GTGATAAGGGATAGGTATCC+GGG 0.453408 1_4:-4734812 Msa0145110:CDS
AGGATTACTATGGAGGAGAA+AGG 0.457524 1_4:-4735202 Msa0145110:CDS
ATTACCTTCAAACCAACAAA+TGG 0.459199 1_4:+4731700 None:intergenic
AACATTAACATTTCCAACAT+TGG 0.459292 1_4:+4735009 None:intergenic
AACAATAAGAATATCGAAGT+TGG 0.461398 1_4:-4734104 Msa0145110:CDS
ACGAGGGACTCCTAGCTCTT+GGG 0.465698 1_4:-4734175 Msa0145110:CDS
GCTGAGGGTTGTCATGTGCT+TGG 0.466822 1_4:-4734710 Msa0145110:CDS
GGGTGAAGATTCGAAGGATA+AGG 0.466903 1_4:-4734972 Msa0145110:CDS
GCTTTGGCTTTGTTTAATTG+GGG 0.471043 1_4:-4734362 Msa0145110:CDS
TATCTGGATATTCATGAGGT+TGG 0.472474 1_4:-4734482 Msa0145110:CDS
GTTGGTGAGAGATGTGATAA+GGG 0.473972 1_4:-4734825 Msa0145110:CDS
GATAGGTATCCGGGGTTAAA+GGG 0.478058 1_4:-4734803 Msa0145110:CDS
AGATTAATAAGAAGAAGAAA+GGG 0.479602 1_4:-4735090 Msa0145110:CDS
AGATCGATGGGGAAACCAGC+TGG 0.483060 1_4:-4735685 Msa0145110:exon
GTATTTGATTTGCCATTAGA+GGG 0.483155 1_4:-4731769 Msa0145110:three_prime_UTR
TTTGTAGAGATTGGGATACT+AGG 0.484831 1_4:-4731811 Msa0145110:three_prime_UTR
GGGGTTGGAGAAGGAGATAA+GGG 0.485908 1_4:-4734596 Msa0145110:CDS
AATGCACAGTTAGAGAAAAT+GGG 0.486916 1_4:-4733960 Msa0145110:CDS
GGAGAAGGAGATAAGGGTGT+TGG 0.487702 1_4:-4734590 Msa0145110:CDS
TTGAGCAAGCAAAGCTATGC+TGG 0.490157 1_4:-4734142 Msa0145110:CDS
CTTGCATTCCATTCAAAGGC+AGG 0.494025 1_4:-4733379 Msa0145110:intron
GAGTAGTGGTGAGGTGAGAG+GGG 0.494532 1_4:-4734624 Msa0145110:CDS
AGTGTTACGAGGCGTTGAAT+CGG 0.494656 1_4:-4735309 Msa0145110:CDS
TCACAAGAATTAAGAGAAGA+AGG 0.494937 1_4:-4735559 Msa0145110:CDS
ATGTTAAAGCTGGATATGAA+TGG 0.495987 1_4:-4734265 Msa0145110:CDS
GTCATGTGCTTGGTTCGATC+CGG 0.496468 1_4:-4734700 Msa0145110:CDS
TAAGGTTACGGATAAGGATA+AGG 0.497434 1_4:-4734954 Msa0145110:CDS
AGTTGGTGAGAGATGTGATA+AGG 0.498390 1_4:-4734826 Msa0145110:CDS
TCCAGGATGTAATGGAGTCT+TGG 0.500662 1_4:+4733481 None:intergenic
TTCTGAGTTGAGGTTAGCTG+AGG 0.503420 1_4:-4734726 Msa0145110:CDS
GAGAAGAAAGCCACCAATGT+TGG 0.504400 1_4:-4735022 Msa0145110:CDS
CTTTGGCTTTGTTTAATTGG+GGG 0.508071 1_4:-4734361 Msa0145110:CDS
ATGAGTAGTGGTGAGGTGAG+AGG 0.509195 1_4:-4734626 Msa0145110:CDS
GTTGATGTGGGAGGAGATTG+AGG 0.511356 1_4:-4734021 Msa0145110:CDS
GGATTACTATGGAGGAGAAA+GGG 0.511446 1_4:-4735201 Msa0145110:CDS
TTACGAGGCGTTGAATCGGT+TGG 0.511704 1_4:-4735305 Msa0145110:CDS
TGTTAAAGCTGGATATGAAT+GGG 0.512823 1_4:-4734264 Msa0145110:CDS
GAAGATATATTCGGAGGCGA+TGG 0.514826 1_4:-4734456 Msa0145110:CDS
AGGAAGATAAAGCGGTTACT+AGG 0.515733 1_4:-4734913 Msa0145110:CDS
TCTGTTGTGGAATTTAAGCT+AGG 0.515915 1_4:-4733831 Msa0145110:CDS
GACTCGAACCATTGTTTCGT+CGG 0.516704 1_4:-4733510 Msa0145110:CDS
TGAAGTCAACGTGGATGGAT+TGG 0.523020 1_4:+4735921 None:intergenic
AATGTCAGTTGTAGAAGCTC+CGG 0.523785 1_4:+4733755 None:intergenic
AGGCTGTTTAAGAACCATGT+TGG 0.526266 1_4:-4734521 Msa0145110:CDS
GCCGAATAATTCAACTGCGT+TGG 0.526616 1_4:-4735242 Msa0145110:CDS
AATGGTTCGAGTCGGAAAGT+TGG 0.527329 1_4:+4733520 None:intergenic
TGCAGTGTGCTATACAATAC+CGG 0.527574 1_4:+4731571 None:intergenic
TCTCTCGAGCATGTTAAAGC+TGG 0.529882 1_4:-4734275 Msa0145110:CDS
AGTATTGATTCATAGATCGA+TGG 0.529960 1_4:-4735698 Msa0145110:exon
TGCGGATAAGTTTCAAGAGA+TGG 0.533330 1_4:-4734387 Msa0145110:CDS
GCGGTTTAGGAAAGTTGTTA+GGG 0.534543 1_4:-4735116 Msa0145110:CDS
AGATTCGAAGGATAAGGTTA+CGG 0.534915 1_4:-4734966 Msa0145110:CDS
ACTTTCCTAAACCGCGCAGC+AGG 0.535349 1_4:+4735124 None:intergenic
TAGTTTGAGGATTACTATGG+AGG 0.535558 1_4:-4735209 Msa0145110:CDS
GTTGAAAAGTTTGAACTAGC+CGG 0.537285 1_4:-4733774 Msa0145110:CDS
AGGAGTCCCTCGTAGAAGTC+CGG 0.537617 1_4:+4734185 None:intergenic
TGAGAGATGTGATAAGGGAT+AGG 0.541480 1_4:-4734820 Msa0145110:CDS
TTATGTGAAGTCAACGTGGA+TGG 0.545002 1_4:+4735916 None:intergenic
GCATGGAATGAGATGTATGA+TGG 0.545970 1_4:-4733559 Msa0145110:CDS
TTGCTGTTTCATTAGAACAA+TGG 0.546528 1_4:+4733715 None:intergenic
AGAATCTGTGAAAATCAAAC+CGG 0.549691 1_4:-4734204 Msa0145110:CDS
ATTAACATTTCCAACATTGG+TGG 0.550948 1_4:+4735012 None:intergenic
TCTGAGTTGAGGTTAGCTGA+GGG 0.552191 1_4:-4734725 Msa0145110:CDS
GATATATTCGGAGGCGATGG+AGG 0.553793 1_4:-4734453 Msa0145110:CDS
GGATGATTACTGTGGAGGAA+TGG 0.555855 1_4:-4734559 Msa0145110:CDS
GGTGAAGGGTGAAGATTCGA+AGG 0.556597 1_4:-4734978 Msa0145110:CDS
TTCTTGTGAAGTATAAGGAT+AGG 0.556963 1_4:-4734778 Msa0145110:CDS
TCGATGACATAGTGCAAGCA+TGG 0.557013 1_4:-4733576 Msa0145110:CDS
AAGGCTTGCATTCCATTCAA+AGG 0.557191 1_4:-4733383 Msa0145110:three_prime_UTR
GTATTGATTCATAGATCGAT+GGG 0.558921 1_4:-4735697 Msa0145110:exon
GCCATGTGTTATATGCAATT+GGG 0.559073 1_4:-4735421 Msa0145110:CDS
ATTCAACGCCTCGTAACACT+TGG 0.561428 1_4:+4735312 None:intergenic
GCTGCAGAACCTCCTCAAAA+GGG 0.561685 1_4:+4734081 None:intergenic
AAGTAGAGCCGCCTGCTGCG+CGG 0.563860 1_4:-4735135 Msa0145110:CDS
ACAAGAACACCCTTTAACCC+CGG 0.566730 1_4:+4734794 None:intergenic
TGAGGTGAGAGGGGAGAATG+GGG 0.567723 1_4:-4734615 Msa0145110:CDS
TCATTATGTCAACTATGTGA+TGG 0.568270 1_4:-4731867 Msa0145110:three_prime_UTR
TCTTGTGAAGTATAAGGATA+GGG 0.568474 1_4:-4734777 Msa0145110:CDS
AATGTTAATGTTAAGGTGAA+GGG 0.568909 1_4:-4734992 Msa0145110:CDS
GGAACACGCCGACGAAACAA+TGG 0.570618 1_4:+4733502 None:intergenic
AACATGGGAGGAATGTTTGG+AGG 0.573058 1_4:-4733802 Msa0145110:CDS
CATATAACACATGGCCATGT+TGG 0.573374 1_4:+4735429 None:intergenic
AAGAAAGGGCATAAAGGAGA+AGG 0.575305 1_4:-4735076 Msa0145110:CDS
ACTGTTGATACCCAAGAGCT+AGG 0.576141 1_4:+4734165 None:intergenic
AAGGAGAAGGCGAGGAAGAG+CGG 0.579153 1_4:-4735063 Msa0145110:CDS
ATTTGATTTGCCATTAGAGG+GGG 0.581931 1_4:-4731767 Msa0145110:three_prime_UTR
TCCAAGACTCCATTACATCC+TGG 0.582606 1_4:-4733482 Msa0145110:CDS
TTACTACTACTTCTGAGTTG+AGG 0.582702 1_4:-4734736 Msa0145110:CDS
CCACCTGCGTAATATACAGC+CGG 0.584515 1_4:+4734681 None:intergenic
GTTGTGTGGCTGTTGTGTGT+AGG 0.584894 1_4:+4735868 None:intergenic
CATTATGTCAACTATGTGAT+GGG 0.586777 1_4:-4731866 Msa0145110:three_prime_UTR
GAGGATTCAGTGACGAATGA+TGG 0.587808 1_4:-4734434 Msa0145110:CDS
TAATGTTAATGTTAAGGTGA+AGG 0.589069 1_4:-4734993 Msa0145110:CDS
AATGGCTTGTTCAGTTTGCG+AGG 0.590314 1_4:-4734541 Msa0145110:CDS
TCCAAACATTCCTCCCATGT+TGG 0.593550 1_4:+4733804 None:intergenic
TTAGAGAAAATGGGTTTGCA+CGG 0.595862 1_4:-4733951 Msa0145110:CDS
AGAAGGAGATAAGGGTGTTG+GGG 0.600333 1_4:-4734588 Msa0145110:CDS
TTCCTAAACCGCGCAGCAGG+CGG 0.600423 1_4:+4735127 None:intergenic
ATATGGAGAGGATATTAGAT+GGG 0.603947 1_4:-4734876 Msa0145110:CDS
TAATAGGATGATTACTGTGG+AGG 0.608454 1_4:-4734564 Msa0145110:CDS
TTGCACTCGTTAATCGCTCG+AGG 0.610141 1_4:+4735385 None:intergenic
TGGATATGAATGGGCTACGA+AGG 0.610634 1_4:-4734255 Msa0145110:CDS
TAACAAGGCAGAGGACAGCA+TGG 0.611758 1_4:-4734054 Msa0145110:CDS
GGTGAATTGTAGTATGAAGT+TGG 0.612990 1_4:-4734843 Msa0145110:CDS
AGAAGAGCTTTACTATACCT+CGG 0.613368 1_4:+4735343 None:intergenic
AGTCAACGTGGATGGATTGG+AGG 0.614072 1_4:+4735924 None:intergenic
ATCAAACCGGACTTCTACGA+GGG 0.616046 1_4:-4734191 Msa0145110:CDS
ATTGTATGAGCGTTCTGTTG+TGG 0.617025 1_4:-4733844 Msa0145110:CDS
AACTTCATACTACAATTCAC+CGG 0.617885 1_4:+4734845 None:intergenic
GGTTCTGCAGCTCTATAACA+AGG 0.619781 1_4:-4734069 Msa0145110:CDS
AAAAGGGATGTTGATGTGGG+AGG 0.621444 1_4:-4734030 Msa0145110:CDS
TTGTTCTAATGAAACAGCAA+TGG 0.622294 1_4:-4733712 Msa0145110:CDS
AGGGCATAAAGGAGAAGGCG+AGG 0.623032 1_4:-4735071 Msa0145110:CDS
TATTTGATTTGCCATTAGAG+GGG 0.623324 1_4:-4731768 Msa0145110:three_prime_UTR
TTCGTATCTGGATATTCATG+AGG 0.624473 1_4:-4734486 Msa0145110:CDS
TCTAATGAAACAGCAATGGA+AGG 0.625596 1_4:-4733708 Msa0145110:intron
AATCAGAATCAAACCCAACA+TGG 0.625835 1_4:+4734507 None:intergenic
AGTTGTTAAGGAAGATAAAG+CGG 0.626540 1_4:-4734921 Msa0145110:CDS
GTGAAGTATAAGGATAGGGA+AGG 0.628310 1_4:-4734773 Msa0145110:CDS
AGTTGTAATGATTCGTTGTG+TGG 0.632436 1_4:+4735854 None:intergenic
TTAAGCTAGGACTACCAACA+TGG 0.632474 1_4:-4733818 Msa0145110:CDS
GCAGCTCTATAACAAGGCAG+AGG 0.632813 1_4:-4734063 Msa0145110:CDS
TTTGATTTGCCATTAGAGGG+GGG 0.633770 1_4:-4731766 Msa0145110:three_prime_UTR
AAGATCAGGCTTCAAAGATG+AGG 0.634249 1_4:-4733896 Msa0145110:CDS
TTGATTTGCCATTAGAGGGG+GGG 0.635677 1_4:-4731765 Msa0145110:three_prime_UTR
TGCACATCTTCACACCAACA+TGG 0.638664 1_4:-4735443 Msa0145110:CDS
TTGTGACATGTTGATGAACA+TGG 0.639131 1_4:+4735576 None:intergenic
TCAAACAACAACAAGAACAA+AGG 0.642821 1_4:-4735634 Msa0145110:CDS
TGTGAAGTTGATATATGGAG+AGG 0.643074 1_4:-4734888 Msa0145110:CDS
GACGAAACAATGGTTCGAGT+CGG 0.643395 1_4:+4733512 None:intergenic
AGAGCTGTTTGATATTGCTG+CGG 0.643756 1_4:-4734405 Msa0145110:CDS
TAGAAGAGCCAAGTGTTACG+AGG 0.646607 1_4:-4735320 Msa0145110:CDS
TGCACTCGTTAATCGCTCGA+GGG 0.647015 1_4:+4735386 None:intergenic
GTCAACGTGGATGGATTGGA+GGG 0.652372 1_4:+4735925 None:intergenic
GGAGCTTCTACAACTGACAT+TGG 0.653645 1_4:-4733753 Msa0145110:CDS
ATGTTCACTTGTCTAAGGCG+AGG 0.655166 1_4:-4734337 Msa0145110:CDS
CCGGCTGTATATTACGCAGG+TGG 0.660415 1_4:-4734681 Msa0145110:CDS
CATGGAATGAGATGTATGAT+GGG 0.662583 1_4:-4733558 Msa0145110:CDS
ACCCAATTGCATATAACACA+TGG 0.669146 1_4:+4735420 None:intergenic
TATGATGAAAAGATGAGTAG+TGG 0.669294 1_4:-4734638 Msa0145110:CDS
TGATAAGGGATAGGTATCCG+GGG 0.671748 1_4:-4734811 Msa0145110:CDS
GATCCGGCTGTATATTACGC+AGG 0.673742 1_4:-4734684 Msa0145110:CDS
TAAGCTAGGACTACCAACAT+GGG 0.675321 1_4:-4733817 Msa0145110:CDS
TTCACTTGTCTAAGGCGAGG+AGG 0.676418 1_4:-4734334 Msa0145110:CDS
TTGCTCTGCAAGTTTCGCCG+AGG 0.682933 1_4:-4735360 Msa0145110:CDS
TGGGATGAAGATATATTCGG+AGG 0.690271 1_4:-4734462 Msa0145110:CDS
TGAAAAGATGAGTAGTGGTG+AGG 0.697497 1_4:-4734633 Msa0145110:CDS
GGCTAATAGGATGATTACTG+TGG 0.700839 1_4:-4734567 Msa0145110:CDS
AATCAAACCGGACTTCTACG+AGG 0.700981 1_4:-4734192 Msa0145110:CDS
GAAGATGTGCAACATCTATG+TGG 0.701400 1_4:+4735455 None:intergenic
GCTAGGACTACCAACATGGG+AGG 0.703040 1_4:-4733814 Msa0145110:CDS
GGAATGAGATGTATGATGGG+TGG 0.713527 1_4:-4733555 Msa0145110:CDS
TATTGATTCATAGATCGATG+GGG 0.736164 1_4:-4735696 Msa0145110:exon

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GAAAAAAAAAATCAATTTTT+AGG + chr1_4:4731665-4731684 None:intergenic 10.0%
!!! TAAAATATTTGAAACATAAA+AGG + chr1_4:4733843-4733862 None:intergenic 10.0%
!!! TTTTATGTTTCAAATATTTT+AGG - chr1_4:4733842-4733861 Msa0145110:CDS 10.0%
!!! TTTATGTTTCAAATATTTTA+GGG - chr1_4:4733843-4733862 Msa0145110:CDS 10.0%
!! AAAATATTGAAGAATAAAAT+AGG + chr1_4:4734075-4734094 None:intergenic 10.0%
!! TATACATTTAATTAAAATTG+TGG - chr1_4:4734242-4734261 Msa0145110:CDS 10.0%
!!! ATATGATTTTACTTTTTAAT+TGG - chr1_4:4734973-4734992 Msa0145110:CDS 10.0%
!!! TATGATTTTACTTTTTAATT+GGG - chr1_4:4734974-4734993 Msa0145110:CDS 10.0%
!! AAATGTTAATGTTAATGTTA+AGG - chr1_4:4732481-4732500 Msa0145110:intron 15.0%
!!! TTATTCTTCAATATTTTTGA+AGG - chr1_4:4734078-4734097 Msa0145110:CDS 15.0%
!!! TAATTAAAATTGTGGTTTTA+TGG - chr1_4:4734250-4734269 Msa0145110:CDS 15.0%
!!! TTATTTTTCAATATAGGTTT+AGG - chr1_4:4734948-4734967 Msa0145110:CDS 15.0%
!! GGAAATATTGAATATATTAA+AGG + chr1_4:4735450-4735469 None:intergenic 15.0%
!!! TATTTCCATATAATTTTAAC+CGG - chr1_4:4735463-4735482 Msa0145110:CDS 15.0%
!! AAGATTAATAAGAAGAAGAA+AGG - chr1_4:4732389-4732408 Msa0145110:intron 20.0%
!! AGATTAATAAGAAGAAGAAA+GGG - chr1_4:4732390-4732409 Msa0145110:intron 20.0%
!! AAAAAACTTAAAATTGTTCC+AGG + chr1_4:4734019-4734038 None:intergenic 20.0%
!!! TGGAACAATTTTAAGTTTTT+TGG - chr1_4:4734018-4734037 Msa0145110:CDS 20.0%
!! ATTCATAATACTGATACTAA+TGG - chr1_4:4734356-4734375 Msa0145110:CDS 20.0%
!!! GGTGATTTATTTTTCAATAT+AGG - chr1_4:4734942-4734961 Msa0145110:CDS 20.0%
!! TATATTAAAGGATGATTAAG+TGG + chr1_4:4735438-4735457 None:intergenic 20.0%
!! TATAACTGAATTAACGAAAA+TGG + chr1_4:4735513-4735532 None:intergenic 20.0%
!! AATAAAAATATTCAGCTTGA+TGG - chr1_4:4735834-4735853 Msa0145110:five_prime_UTR 20.0%
!! ATAAAAATATTCAGCTTGAT+GGG - chr1_4:4735835-4735854 Msa0145110:five_prime_UTR 20.0%
!!! TTATACAATTCTATTTCTTC+CGG - chr1_4:4735890-4735909 Msa0145110:five_prime_UTR 20.0%
! TCATTACAACTTCATTCATT+TGG - chr1_4:4731638-4731657 Msa0145110:three_prime_UTR 25.0%
!!! TTCTTGTTGTTGTTTGATTT+TGG + chr1_4:4731843-4731862 None:intergenic 25.0%
! AACATTAACATTTCCAACAT+TGG + chr1_4:4732474-4732493 None:intergenic 25.0%
! TAATGTTAATGTTAAGGTGA+AGG - chr1_4:4732487-4732506 Msa0145110:intron 25.0%
! AATGTTAATGTTAAGGTGAA+GGG - chr1_4:4732488-4732507 Msa0145110:intron 25.0%
! AACAATAAGAATATCGAAGT+TGG - chr1_4:4733376-4733395 Msa0145110:intron 25.0%
!! GATACAGATATACCTTTTAT+GGG - chr1_4:4733606-4733625 Msa0145110:intron 25.0%
!! ATACAGATATACCTTTTATG+GGG - chr1_4:4733607-4733626 Msa0145110:intron 25.0%
!!! TGGCATCTAAAAGTTTTAAA+AGG - chr1_4:4734218-4734237 Msa0145110:CDS 25.0%
!!! AATTGTGGTTTTATGGTTTA+TGG - chr1_4:4734257-4734276 Msa0145110:CDS 25.0%
!!! GTTAAGGTTTTAAACTAGTT+TGG - chr1_4:4734620-4734639 Msa0145110:CDS 25.0%
! CATATGAGGACATAATTTAA+AGG + chr1_4:4734807-4734826 None:intergenic 25.0%
!!! TCTCTTTCTTTTTTCATATG+AGG + chr1_4:4734821-4734840 None:intergenic 25.0%
! TTCAAATCTCATCGTTAAAT+AGG - chr1_4:4735123-4735142 Msa0145110:CDS 25.0%
! TTGACATTTATGAAATCTGA+TGG - chr1_4:4735177-4735196 Msa0145110:CDS 25.0%
!!! TTTGATATGCTGTTTCATAA+TGG - chr1_4:4735220-4735239 Msa0145110:CDS 25.0%
! ATAGACCGGTTAAAATTATA+TGG + chr1_4:4735471-4735490 None:intergenic 25.0%
! GAAGATTAAGTAAAATAGAC+CGG + chr1_4:4735485-4735504 None:intergenic 25.0%
! ATGAAATCATAAAGACTGAA+TGG - chr1_4:4735556-4735575 Msa0145110:CDS 25.0%
!!! ATATCAGTTTTGTAGAGATT+GGG - chr1_4:4735661-4735680 Msa0145110:CDS 25.0%
!! TTTTTATTGTGTTTGCAAAC+TGG + chr1_4:4735822-4735841 None:intergenic 25.0%
!! AGTATTGATTCATAGATCGA+TGG - chr1_4:4731782-4731801 Msa0145110:three_prime_UTR 30.0%
!! GTATTGATTCATAGATCGAT+GGG - chr1_4:4731783-4731802 Msa0145110:three_prime_UTR 30.0%
!! TATTGATTCATAGATCGATG+GGG - chr1_4:4731784-4731803 Msa0145110:three_prime_UTR 30.0%
TCAAACAACAACAAGAACAA+AGG - chr1_4:4731846-4731865 Msa0145110:three_prime_UTR 30.0%
TCACAAGAATTAAGAGAAGA+AGG - chr1_4:4731921-4731940 Msa0145110:intron 30.0%
TTCCAAAAAAAAGACAACGA+AGG - chr1_4:4731957-4731976 Msa0145110:intron 30.0%
TGATAGTTTGAGGATTACTA+TGG - chr1_4:4732268-4732287 Msa0145110:intron 30.0%
ATTAACATTTCCAACATTGG+TGG + chr1_4:4732471-4732490 None:intergenic 30.0%
AGTTGTTAAGGAAGATAAAG+CGG - chr1_4:4732559-4732578 Msa0145110:intron 30.0%
TATATGGAGAGGATATTAGA+TGG - chr1_4:4732603-4732622 Msa0145110:intron 30.0%
ATATGGAGAGGATATTAGAT+GGG - chr1_4:4732604-4732623 Msa0145110:intron 30.0%
AACTTCATACTACAATTCAC+CGG + chr1_4:4732638-4732657 None:intergenic 30.0%
TTCTTGTGAAGTATAAGGAT+AGG - chr1_4:4732702-4732721 Msa0145110:intron 30.0%
TCTTGTGAAGTATAAGGATA+GGG - chr1_4:4732703-4732722 Msa0145110:intron 30.0%
! CTCATCTTTTCATCATAACA+CGG + chr1_4:4732839-4732858 None:intergenic 30.0%
TATGATGAAAAGATGAGTAG+TGG - chr1_4:4732842-4732861 Msa0145110:intron 30.0%
!! TGCTTTGGCTTTGTTTAATT+GGG - chr1_4:4733117-4733136 Msa0145110:intron 30.0%
ATGTTAAAGCTGGATATGAA+TGG - chr1_4:4733215-4733234 Msa0145110:intron 30.0%
TGTTAAAGCTGGATATGAAT+GGG - chr1_4:4733216-4733235 Msa0145110:intron 30.0%
AGAATCTGTGAAAATCAAAC+CGG - chr1_4:4733276-4733295 Msa0145110:intron 30.0%
TAATGCACAGTTAGAGAAAA+TGG - chr1_4:4733519-4733538 Msa0145110:CDS 30.0%
AATGCACAGTTAGAGAAAAT+GGG - chr1_4:4733520-4733539 Msa0145110:CDS 30.0%
! GGATACAGATATACCTTTTA+TGG - chr1_4:4733605-4733624 Msa0145110:intron 30.0%
!! TTGCTGTTTCATTAGAACAA+TGG + chr1_4:4733768-4733787 None:intergenic 30.0%
TTGTTCTAATGAAACAGCAA+TGG - chr1_4:4733768-4733787 Msa0145110:CDS 30.0%
!! AAACCACTTTTCATGATTAC+AGG - chr1_4:4733873-4733892 Msa0145110:CDS 30.0%
!! AACCACTTTTCATGATTACA+GGG - chr1_4:4733874-4733893 Msa0145110:CDS 30.0%
AAAATTGTTCCAGGATGTAA+TGG + chr1_4:4734010-4734029 None:intergenic 30.0%
AAAAATCTAGCGAGATTTGT+TGG - chr1_4:4734198-4734217 Msa0145110:CDS 30.0%
GAATCACAATTTGATGTTGA+TGG - chr1_4:4734542-4734561 Msa0145110:CDS 30.0%
GTAGAAGCAAGTTATTGTTA+AGG - chr1_4:4734604-4734623 Msa0145110:CDS 30.0%
AAATAGGTTGTGTGAGAAAT+AGG - chr1_4:4734670-4734689 Msa0145110:CDS 30.0%
!!! GTGAGAAATAGGTTTTGTTT+AGG - chr1_4:4734681-4734700 Msa0145110:CDS 30.0%
! ATCATTCCCCAAAATGTTTT+GGG + chr1_4:4734769-4734788 None:intergenic 30.0%
! AATCATTCCCCAAAATGTTT+TGG + chr1_4:4734770-4734789 None:intergenic 30.0%
AATCACTTGACATGTTGAAA+TGG - chr1_4:4734895-4734914 Msa0145110:CDS 30.0%
! TAATTCAGCTGATTTATCAG+AGG - chr1_4:4735048-4735067 Msa0145110:CDS 30.0%
!! ATTTATCAGAGGTATTGTGT+TGG - chr1_4:4735059-4735078 Msa0145110:CDS 30.0%
AAAACCAACAACAATTTGCA+GGG + chr1_4:4735271-4735290 None:intergenic 30.0%
AAAAACCAACAACAATTTGC+AGG + chr1_4:4735272-4735291 None:intergenic 30.0%
!!! TGCAAATTGTTGTTGGTTTT+TGG - chr1_4:4735271-4735290 Msa0145110:CDS 30.0%
TCAGTTATACATTTGTACCA+AGG - chr1_4:4735524-4735543 Msa0145110:CDS 30.0%
!! TTTATGTTCCTTTTGATTGC+AGG - chr1_4:4735580-4735599 Msa0145110:CDS 30.0%
!! TTATGTTCCTTTTGATTGCA+GGG - chr1_4:4735581-4735600 Msa0145110:CDS 30.0%
TCATTATGTCAACTATGTGA+TGG - chr1_4:4735613-4735632 Msa0145110:CDS 30.0%
CATTATGTCAACTATGTGAT+GGG - chr1_4:4735614-4735633 Msa0145110:CDS 30.0%
!! GATATCAGTTTTGTAGAGAT+TGG - chr1_4:4735660-4735679 Msa0145110:CDS 30.0%
GATACTAGGATTAGAAAGAT+TGG - chr1_4:4735683-4735702 Msa0145110:exon 30.0%
!! AGTATTTGATTTGCCATTAG+AGG - chr1_4:4735710-4735729 Msa0145110:five_prime_UTR 30.0%
!! GTATTTGATTTGCCATTAGA+GGG - chr1_4:4735711-4735730 Msa0145110:five_prime_UTR 30.0%
!! TATTTGATTTGCCATTAGAG+GGG - chr1_4:4735712-4735731 Msa0145110:five_prime_UTR 30.0%
CAGTATATGATTCCATTTGT+TGG - chr1_4:4735768-4735787 Msa0145110:five_prime_UTR 30.0%
ATTACCTTCAAACCAACAAA+TGG + chr1_4:4735783-4735802 None:intergenic 30.0%
! TCTTTTATGTGAAGTCAACG+TGG + chr1_4:4731571-4731590 None:intergenic 35.0%
AGTTGTAATGATTCGTTGTG+TGG + chr1_4:4731629-4731648 None:intergenic 35.0%
! TTGTGACATGTTGATGAACA+TGG + chr1_4:4731907-4731926 None:intergenic 35.0%
!!! CTCCTTCGTTGTCTTTTTTT+TGG + chr1_4:4731962-4731981 None:intergenic 35.0%
!!! GTTTTTGGGTAAGAGTTTGA+GGG + chr1_4:4732006-4732025 None:intergenic 35.0%
! GCAACATCTATGTGGTTTTT+GGG + chr1_4:4732020-4732039 None:intergenic 35.0%
! TGCAACATCTATGTGGTTTT+TGG + chr1_4:4732021-4732040 None:intergenic 35.0%
GCCATGTGTTATATGCAATT+GGG - chr1_4:4732059-4732078 Msa0145110:intron 35.0%
ACCCAATTGCATATAACACA+TGG + chr1_4:4732063-4732082 None:intergenic 35.0%
TGTTATATGCAATTGGGTCT+TGG - chr1_4:4732065-4732084 Msa0145110:intron 35.0%
AGAAGAGCTTTACTATACCT+CGG + chr1_4:4732140-4732159 None:intergenic 35.0%
TCCAACGCAGTTGAATTATT+CGG + chr1_4:4732242-4732261 None:intergenic 35.0%
! TGGAGATTCTTGATAGTTTG+AGG - chr1_4:4732258-4732277 Msa0145110:intron 35.0%
TAGTTTGAGGATTACTATGG+AGG - chr1_4:4732271-4732290 Msa0145110:intron 35.0%
! AAGAAGAAGAAAGGGCATAA+AGG - chr1_4:4732398-4732417 Msa0145110:intron 35.0%
AGATTCGAAGGATAAGGTTA+CGG - chr1_4:4732514-4732533 Msa0145110:intron 35.0%
TAAGGTTACGGATAAGGATA+AGG - chr1_4:4732526-4732545 Msa0145110:intron 35.0%
GGATAGTAACGAAGTTGTTA+AGG - chr1_4:4732547-4732566 Msa0145110:intron 35.0%
!! AGGACTGTGAAGTTGATATA+TGG - chr1_4:4732587-4732606 Msa0145110:intron 35.0%
!! TGTGAAGTTGATATATGGAG+AGG - chr1_4:4732592-4732611 Msa0145110:intron 35.0%
GGTGAATTGTAGTATGAAGT+TGG - chr1_4:4732637-4732656 Msa0145110:intron 35.0%
TTACTACTACTTCTGAGTTG+AGG - chr1_4:4732744-4732763 Msa0145110:intron 35.0%
TAATAGGATGATTACTGTGG+AGG - chr1_4:4732916-4732935 Msa0145110:intron 35.0%
AATCAGAATCAAACCCAACA+TGG + chr1_4:4732976-4732995 None:intergenic 35.0%
! GTTTGATTCTGATTCGTATC+TGG - chr1_4:4732982-4733001 Msa0145110:intron 35.0%
TTCGTATCTGGATATTCATG+AGG - chr1_4:4732994-4733013 Msa0145110:intron 35.0%
TATCTGGATATTCATGAGGT+TGG - chr1_4:4732998-4733017 Msa0145110:intron 35.0%
ATCTGGATATTCATGAGGTT+GGG - chr1_4:4732999-4733018 Msa0145110:intron 35.0%
GGTTGGGATGAAGATATATT+CGG - chr1_4:4733015-4733034 Msa0145110:intron 35.0%
!! CTGCTTTGGCTTTGTTTAAT+TGG - chr1_4:4733116-4733135 Msa0145110:intron 35.0%
!! GCTTTGGCTTTGTTTAATTG+GGG - chr1_4:4733118-4733137 Msa0145110:intron 35.0%
!! CTTTGGCTTTGTTTAATTGG+GGG - chr1_4:4733119-4733138 Msa0145110:intron 35.0%
! TTAGAGAAAATGGGTTTGCA+CGG - chr1_4:4733529-4733548 Msa0145110:CDS 35.0%
AACAGAACGCTCATACAATA+AGG + chr1_4:4733635-4733654 None:intergenic 35.0%
TCTGTTGTGGAATTTAAGCT+AGG - chr1_4:4733649-4733668 Msa0145110:intron 35.0%
GTTGAAAAGTTTGAACTAGC+CGG - chr1_4:4733706-4733725 Msa0145110:intron 35.0%
TCTAATGAAACAGCAATGGA+AGG - chr1_4:4733772-4733791 Msa0145110:CDS 35.0%
AACCCTGTAATCATGAAAAG+TGG + chr1_4:4733879-4733898 None:intergenic 35.0%
CATGGAATGAGATGTATGAT+GGG - chr1_4:4733922-4733941 Msa0145110:CDS 35.0%
!! TTTGGCTTGTCATTCTTTAG+AGG - chr1_4:4734036-4734055 Msa0145110:CDS 35.0%
TTTAGAAGATCAACTGCCAT+AGG + chr1_4:4734171-4734190 None:intergenic 35.0%
ATTAACCAACAGGAAACACT+CGG + chr1_4:4734292-4734311 None:intergenic 35.0%
! GTGTTGTCTTTTCTGTTGTT+TGG - chr1_4:4734320-4734339 Msa0145110:CDS 35.0%
! AGCGAAGATGGTAAAAGTTT+TGG - chr1_4:4734423-4734442 Msa0145110:CDS 35.0%
!! TGCCTATGTTCTAGAATCTA+CGG - chr1_4:4734473-4734492 Msa0145110:CDS 35.0%
!! AACCGTAGATTCTAGAACAT+AGG + chr1_4:4734478-4734497 None:intergenic 35.0%
!! TGTTCTAGAATCTACGGTTT+AGG - chr1_4:4734479-4734498 Msa0145110:CDS 35.0%
AATGATATCAGCATGCTTAG+TGG - chr1_4:4734520-4734539 Msa0145110:CDS 35.0%
TGAGTACAGTATATGATGTC+AGG - chr1_4:4734574-4734593 Msa0145110:CDS 35.0%
!!! ATAGGTTTTGTTTAGGAGTC+AGG - chr1_4:4734688-4734707 Msa0145110:CDS 35.0%
!!! TAGGTTTTGTTTAGGAGTCA+GGG - chr1_4:4734689-4734708 Msa0145110:CDS 35.0%
! GGACTAATACCTTTTGGATT+AGG + chr1_4:4734741-4734760 None:intergenic 35.0%
GGAATGATTGACATTGTCAA+TGG - chr1_4:4734781-4734800 Msa0145110:CDS 35.0%
AGAGACCAACAAGGAAAAAT+GGG - chr1_4:4734867-4734886 Msa0145110:CDS 35.0%
!! TTTTGCCCATTTTTCCTTGT+TGG + chr1_4:4734875-4734894 None:intergenic 35.0%
AAACCAACAACAATTTGCAG+GGG + chr1_4:4735270-4735289 None:intergenic 35.0%
TTAAGTCGTCTTAAGCTAAC+TGG + chr1_4:4735324-4735343 None:intergenic 35.0%
TAACCAGACAATGAACATGT+AGG + chr1_4:4735368-4735387 None:intergenic 35.0%
CATTGTCTGGTTATACAAGA+TGG - chr1_4:4735375-4735394 Msa0145110:CDS 35.0%
GATTTCATCAAAGTCATCCT+TGG + chr1_4:4735544-4735563 None:intergenic 35.0%
TTTGTAGAGATTGGGATACT+AGG - chr1_4:4735669-4735688 Msa0145110:CDS 35.0%
!! ATTTGATTTGCCATTAGAGG+GGG - chr1_4:4735713-4735732 Msa0145110:five_prime_UTR 35.0%
!! GATTCCATTTGTTGGTTTGA+AGG - chr1_4:4735776-4735795 Msa0145110:five_prime_UTR 35.0%
TTATGTGAAGTCAACGTGGA+TGG + chr1_4:4731567-4731586 None:intergenic 40.0%
GAAACCAGCTGGAAAAAAGA+AGG - chr1_4:4731806-4731825 Msa0145110:three_prime_UTR 40.0%
!!! TGTTCCTTCTTTTTTCCAGC+TGG + chr1_4:4731813-4731832 None:intergenic 40.0%
!!! GGTTTTTGGGTAAGAGTTTG+AGG + chr1_4:4732007-4732026 None:intergenic 40.0%
GAAGATGTGCAACATCTATG+TGG + chr1_4:4732028-4732047 None:intergenic 40.0%
CATATAACACATGGCCATGT+TGG + chr1_4:4732054-4732073 None:intergenic 40.0%
GGCCATGTGTTATATGCAAT+TGG - chr1_4:4732058-4732077 Msa0145110:intron 40.0%
AGGATTACTATGGAGGAGAA+AGG - chr1_4:4732278-4732297 Msa0145110:intron 40.0%
GGATTACTATGGAGGAGAAA+GGG - chr1_4:4732279-4732298 Msa0145110:intron 40.0%
TGATGAGACTGAGATTGCTT+TGG - chr1_4:4732310-4732329 Msa0145110:intron 40.0%
GCGGTTTAGGAAAGTTGTTA+GGG - chr1_4:4732364-4732383 Msa0145110:intron 40.0%
! AAGAAAGGGCATAAAGGAGA+AGG - chr1_4:4732404-4732423 Msa0145110:intron 40.0%
GAAGGATAAGGTTACGGATA+AGG - chr1_4:4732520-4732539 Msa0145110:intron 40.0%
AGGAAGATAAAGCGGTTACT+AGG - chr1_4:4732567-4732586 Msa0145110:intron 40.0%
!! AGTTGGTGAGAGATGTGATA+AGG - chr1_4:4732654-4732673 Msa0145110:intron 40.0%
! GTTGGTGAGAGATGTGATAA+GGG - chr1_4:4732655-4732674 Msa0145110:intron 40.0%
TGAGAGATGTGATAAGGGAT+AGG - chr1_4:4732660-4732679 Msa0145110:intron 40.0%
TGTGATAAGGGATAGGTATC+CGG - chr1_4:4732667-4732686 Msa0145110:intron 40.0%
GGGTGTTCTTGTGAAGTATA+AGG - chr1_4:4732697-4732716 Msa0145110:intron 40.0%
GTGAAGTATAAGGATAGGGA+AGG - chr1_4:4732707-4732726 Msa0145110:intron 40.0%
TAAGGATAGGGAAGGTGATT+TGG - chr1_4:4732715-4732734 Msa0145110:intron 40.0%
! GTATATTACGCAGGTGGATT+TGG - chr1_4:4732805-4732824 Msa0145110:intron 40.0%
TGAAAAGATGAGTAGTGGTG+AGG - chr1_4:4732847-4732866 Msa0145110:intron 40.0%
GGCTAATAGGATGATTACTG+TGG - chr1_4:4732913-4732932 Msa0145110:intron 40.0%
AGGCTGTTTAAGAACCATGT+TGG - chr1_4:4732959-4732978 Msa0145110:intron 40.0%
GGCTGTTTAAGAACCATGTT+GGG - chr1_4:4732960-4732979 Msa0145110:intron 40.0%
TGGGATGAAGATATATTCGG+AGG - chr1_4:4733018-4733037 Msa0145110:intron 40.0%
AGAGCTGTTTGATATTGCTG+CGG - chr1_4:4733075-4733094 Msa0145110:intron 40.0%
TGCGGATAAGTTTCAAGAGA+TGG - chr1_4:4733093-4733112 Msa0145110:intron 40.0%
TGGAAAAAGGGATGTTGATG+TGG - chr1_4:4733446-4733465 Msa0145110:three_prime_UTR 40.0%
GGAAAAAGGGATGTTGATGT+GGG - chr1_4:4733447-4733466 Msa0145110:three_prime_UTR 40.0%
ATTGAGGAACAGCGTTTGAA+TGG - chr1_4:4733475-4733494 Msa0145110:CDS 40.0%
! TTCTGAAGAAGCTGAAGATC+AGG - chr1_4:4733570-4733589 Msa0145110:CDS 40.0%
AAGATCAGGCTTCAAAGATG+AGG - chr1_4:4733584-4733603 Msa0145110:CDS 40.0%
! ACAATAAGGTGCCCCATAAA+AGG + chr1_4:4733621-4733640 None:intergenic 40.0%
ATTGTATGAGCGTTCTGTTG+TGG - chr1_4:4733636-4733655 Msa0145110:intron 40.0%
TTAAGCTAGGACTACCAACA+TGG - chr1_4:4733662-4733681 Msa0145110:intron 40.0%
TAAGCTAGGACTACCAACAT+GGG - chr1_4:4733663-4733682 Msa0145110:intron 40.0%
AATGTCAGTTGTAGAAGCTC+CGG + chr1_4:4733728-4733747 None:intergenic 40.0%
TGAAACAGCAATGGAAGGTA+CGG - chr1_4:4733777-4733796 Msa0145110:CDS 40.0%
GCATGGAATGAGATGTATGA+TGG - chr1_4:4733921-4733940 Msa0145110:CDS 40.0%
AAGGCTTGCATTCCATTCAA+AGG - chr1_4:4734097-4734116 Msa0145110:CDS 40.0%
GCAGAAAGAACTGTAGTACA+AGG + chr1_4:4734143-4734162 None:intergenic 40.0%
ATATACCGAGTGTTTCCTGT+TGG - chr1_4:4734284-4734303 Msa0145110:CDS 40.0%
! TCCTGTTGGTTAATCACAAC+TGG - chr1_4:4734298-4734317 Msa0145110:CDS 40.0%
ACCAGTTGTGATTAACCAAC+AGG + chr1_4:4734302-4734321 None:intergenic 40.0%
TAGTAACCAACTAGCGAAGA+TGG - chr1_4:4734411-4734430 Msa0145110:CDS 40.0%
! CTTTTACCATCTTCGCTAGT+TGG + chr1_4:4734420-4734439 None:intergenic 40.0%
GTACAGTATATGATGTCAGG+TGG - chr1_4:4734577-4734596 Msa0145110:CDS 40.0%
TCTGTCTGTATTCTCAGCTA+GGG - chr1_4:4734647-4734666 Msa0145110:CDS 40.0%
GTATTCTCAGCTAGGGAAAT+AGG - chr1_4:4734654-4734673 Msa0145110:CDS 40.0%
TGCTTCTCACCTAATCCAAA+AGG - chr1_4:4734729-4734748 Msa0145110:CDS 40.0%
CAGAGACCAACAAGGAAAAA+TGG - chr1_4:4734866-4734885 Msa0145110:CDS 40.0%
! GATAGTTTGCATGTGGTCAT+AGG - chr1_4:4735100-4735119 Msa0145110:CDS 40.0%
!! TGCTGTTTCATAATGGTCAC+CGG - chr1_4:4735227-4735246 Msa0145110:CDS 40.0%
GGACACGTCAAAAAAAAAGC+CGG + chr1_4:4735249-4735268 None:intergenic 40.0%
!!! TGTTGTTGGTTTTTGGCGTT+AGG - chr1_4:4735278-4735297 Msa0145110:CDS 40.0%
!!! GTTGTTGGTTTTTGGCGTTA+GGG - chr1_4:4735279-4735298 Msa0145110:CDS 40.0%
!!! TTGTTGGTTTTTGGCGTTAG+GGG - chr1_4:4735280-4735299 Msa0145110:CDS 40.0%
GTCTGGTTATACAAGATGGA+TGG - chr1_4:4735379-4735398 Msa0145110:CDS 40.0%
!! TTCCTTTTGATTGCAGGGAT+TGG - chr1_4:4735586-4735605 Msa0145110:CDS 40.0%
AACCAATCCCTGCAATCAAA+AGG + chr1_4:4735591-4735610 None:intergenic 40.0%
!! TTTGATTTGCCATTAGAGGG+GGG - chr1_4:4735714-4735733 Msa0145110:five_prime_UTR 40.0%
TGCAGTGTGCTATACAATAC+CGG + chr1_4:4735912-4735931 None:intergenic 40.0%
TGAAGTCAACGTGGATGGAT+TGG + chr1_4:4731562-4731581 None:intergenic 45.0%
TGGCTGTTGTGTGTAGGTTA+GGG + chr1_4:4731609-4731628 None:intergenic 45.0%
TGCACATCTTCACACCAACA+TGG - chr1_4:4732037-4732056 Msa0145110:intron 45.0%
TAGAAGAGCCAAGTGTTACG+AGG - chr1_4:4732160-4732179 Msa0145110:intron 45.0%
ATTCAACGCCTCGTAACACT+TGG + chr1_4:4732171-4732190 None:intergenic 45.0%
!! AGTGTTACGAGGCGTTGAAT+CGG - chr1_4:4732171-4732190 Msa0145110:intron 45.0%
GCCGAATAATTCAACTGCGT+TGG - chr1_4:4732238-4732257 Msa0145110:intron 45.0%
CGCGGTTTAGGAAAGTTGTT+AGG - chr1_4:4732363-4732382 Msa0145110:intron 45.0%
GAGAAGAAAGCCACCAATGT+TGG - chr1_4:4732458-4732477 Msa0145110:intron 45.0%
GGGTGAAGATTCGAAGGATA+AGG - chr1_4:4732508-4732527 Msa0145110:intron 45.0%
GTGATAAGGGATAGGTATCC+GGG - chr1_4:4732668-4732687 Msa0145110:intron 45.0%
TGATAAGGGATAGGTATCCG+GGG - chr1_4:4732669-4732688 Msa0145110:intron 45.0%
GATAGGTATCCGGGGTTAAA+GGG - chr1_4:4732677-4732696 Msa0145110:intron 45.0%
ACAAGAACACCCTTTAACCC+CGG + chr1_4:4732689-4732708 None:intergenic 45.0%
! TTCTGAGTTGAGGTTAGCTG+AGG - chr1_4:4732754-4732773 Msa0145110:intron 45.0%
! TCTGAGTTGAGGTTAGCTGA+GGG - chr1_4:4732755-4732774 Msa0145110:intron 45.0%
! TACGCAGGTGGATTTGGATA+TGG - chr1_4:4732811-4732830 Msa0145110:intron 45.0%
!! GAGAAGGAGATAAGGGTGTT+GGG - chr1_4:4732891-4732910 Msa0145110:intron 45.0%
!! AGAAGGAGATAAGGGTGTTG+GGG - chr1_4:4732892-4732911 Msa0145110:intron 45.0%
!! ATAAGGGTGTTGGGGCTAAT+AGG - chr1_4:4732900-4732919 Msa0145110:intron 45.0%
GGATGATTACTGTGGAGGAA+TGG - chr1_4:4732921-4732940 Msa0145110:intron 45.0%
!! AATGGCTTGTTCAGTTTGCG+AGG - chr1_4:4732939-4732958 Msa0145110:intron 45.0%
GAAGATATATTCGGAGGCGA+TGG - chr1_4:4733024-4733043 Msa0145110:intron 45.0%
GAGGATTCAGTGACGAATGA+TGG - chr1_4:4733046-4733065 Msa0145110:intron 45.0%
GTTTCAAGAGATGGCTGCTT+TGG - chr1_4:4733102-4733121 Msa0145110:intron 45.0%
GGGGAATGTTCACTTGTCTA+AGG - chr1_4:4733138-4733157 Msa0145110:intron 45.0%
! ATGTTCACTTGTCTAAGGCG+AGG - chr1_4:4733143-4733162 Msa0145110:intron 45.0%
TCTCTCGAGCATGTTAAAGC+TGG - chr1_4:4733205-4733224 Msa0145110:intron 45.0%
!! TGGATATGAATGGGCTACGA+AGG - chr1_4:4733225-4733244 Msa0145110:intron 45.0%
! ATGGGCTACGAAGGAGTATA+AGG - chr1_4:4733234-4733253 Msa0145110:intron 45.0%
AATCAAACCGGACTTCTACG+AGG - chr1_4:4733288-4733307 Msa0145110:intron 45.0%
ATCAAACCGGACTTCTACGA+GGG - chr1_4:4733289-4733308 Msa0145110:intron 45.0%
ACTGTTGATACCCAAGAGCT+AGG + chr1_4:4733318-4733337 None:intergenic 45.0%
TTGAGCAAGCAAAGCTATGC+TGG - chr1_4:4733338-4733357 Msa0145110:intron 45.0%
! TATCGAAGTTGGCCCTTTTG+AGG - chr1_4:4733387-4733406 Msa0145110:three_prime_UTR 45.0%
GGTTCTGCAGCTCTATAACA+AGG - chr1_4:4733411-4733430 Msa0145110:three_prime_UTR 45.0%
CAGAGGACAGCATGGAAAAA+GGG - chr1_4:4733434-4733453 Msa0145110:three_prime_UTR 45.0%
AAAAGGGATGTTGATGTGGG+AGG - chr1_4:4733450-4733469 Msa0145110:three_prime_UTR 45.0%
ACCAACATGGGAGGAATGTT+TGG - chr1_4:4733675-4733694 Msa0145110:intron 45.0%
TCCAAACATTCCTCCCATGT+TGG + chr1_4:4733679-4733698 None:intergenic 45.0%
AACATGGGAGGAATGTTTGG+AGG - chr1_4:4733678-4733697 Msa0145110:intron 45.0%
GGAGCTTCTACAACTGACAT+TGG - chr1_4:4733727-4733746 Msa0145110:CDS 45.0%
! GAAACAGCAATGGAAGGTAC+GGG - chr1_4:4733778-4733797 Msa0145110:CDS 45.0%
TCGATGACATAGTGCAAGCA+TGG - chr1_4:4733904-4733923 Msa0145110:CDS 45.0%
! GGAATGAGATGTATGATGGG+TGG - chr1_4:4733925-4733944 Msa0145110:CDS 45.0%
AATGGTTCGAGTCGGAAAGT+TGG + chr1_4:4733963-4733982 None:intergenic 45.0%
GACGAAACAATGGTTCGAGT+CGG + chr1_4:4733971-4733990 None:intergenic 45.0%
GACTCGAACCATTGTTTCGT+CGG - chr1_4:4733970-4733989 Msa0145110:CDS 45.0%
TCCAAGACTCCATTACATCC+TGG - chr1_4:4733998-4734017 Msa0145110:CDS 45.0%
! TCCAGGATGTAATGGAGTCT+TGG + chr1_4:4734002-4734021 None:intergenic 45.0%
CTTGCATTCCATTCAAAGGC+AGG - chr1_4:4734101-4734120 Msa0145110:CDS 45.0%
CTTACTCACCTGCCTTTGAA+TGG + chr1_4:4734112-4734131 None:intergenic 45.0%
GTTCTTTCTGCACGTTCCTA+TGG - chr1_4:4734152-4734171 Msa0145110:CDS 45.0%
CTCTGTCTGTATTCTCAGCT+AGG - chr1_4:4734646-4734665 Msa0145110:CDS 45.0%
! GCAGCAGGACTAATACCTTT+TGG + chr1_4:4734747-4734766 None:intergenic 45.0%
! TCCTGCTGCCCAAAACATTT+TGG - chr1_4:4734758-4734777 Msa0145110:CDS 45.0%
! CCTGCTGCCCAAAACATTTT+GGG - chr1_4:4734759-4734778 Msa0145110:CDS 45.0%
! CTGCTGCCCAAAACATTTTG+GGG - chr1_4:4734760-4734779 Msa0145110:CDS 45.0%
! GGGTTTGGATAGTTTGCATG+TGG - chr1_4:4735093-4735112 Msa0145110:CDS 45.0%
TGTCCCCTGCAAATTGTTGT+TGG - chr1_4:4735264-4735283 Msa0145110:CDS 45.0%
ACGCCTACATGTTCATTGTC+TGG - chr1_4:4735362-4735381 Msa0145110:CDS 45.0%
!! TTGATTTGCCATTAGAGGGG+GGG - chr1_4:4735715-4735734 Msa0145110:five_prime_UTR 45.0%
AACATATACCCCCCCTCTAA+TGG + chr1_4:4735726-4735745 None:intergenic 45.0%
!! GTCAACGTGGATGGATTGGA+GGG + chr1_4:4731558-4731577 None:intergenic 50.0%
!! AGTCAACGTGGATGGATTGG+AGG + chr1_4:4731559-4731578 None:intergenic 50.0%
GTGGCTGTTGTGTGTAGGTT+AGG + chr1_4:4731610-4731629 None:intergenic 50.0%
GTTGTGTGGCTGTTGTGTGT+AGG + chr1_4:4731615-4731634 None:intergenic 50.0%
TGCACTCGTTAATCGCTCGA+GGG + chr1_4:4732097-4732116 None:intergenic 50.0%
TTGCACTCGTTAATCGCTCG+AGG + chr1_4:4732098-4732117 None:intergenic 50.0%
!! TTACGAGGCGTTGAATCGGT+TGG - chr1_4:4732175-4732194 Msa0145110:intron 50.0%
! GGCGTTGAATCGGTTGGATT+TGG - chr1_4:4732181-4732200 Msa0145110:intron 50.0%
GGTGAAGGGTGAAGATTCGA+AGG - chr1_4:4732502-4732521 Msa0145110:intron 50.0%
TATTAGATGGGCGCAGTTGC+CGG - chr1_4:4732616-4732635 Msa0145110:intron 50.0%
GGATAGGTATCCGGGGTTAA+AGG - chr1_4:4732676-4732695 Msa0145110:intron 50.0%
! GTCATGTGCTTGGTTCGATC+CGG - chr1_4:4732780-4732799 Msa0145110:intron 50.0%
GATCCGGCTGTATATTACGC+AGG - chr1_4:4732796-4732815 Msa0145110:intron 50.0%
CCACCTGCGTAATATACAGC+CGG + chr1_4:4732802-4732821 None:intergenic 50.0%
ATGAGTAGTGGTGAGGTGAG+AGG - chr1_4:4732854-4732873 Msa0145110:intron 50.0%
TGAGTAGTGGTGAGGTGAGA+GGG - chr1_4:4732855-4732874 Msa0145110:intron 50.0%
TGGGGTTGGAGAAGGAGATA+AGG - chr1_4:4732883-4732902 Msa0145110:intron 50.0%
GGGGTTGGAGAAGGAGATAA+GGG - chr1_4:4732884-4732903 Msa0145110:intron 50.0%
! GGAGAAGGAGATAAGGGTGT+TGG - chr1_4:4732890-4732909 Msa0145110:intron 50.0%
GATATATTCGGAGGCGATGG+AGG - chr1_4:4733027-4733046 Msa0145110:intron 50.0%
! TTCACTTGTCTAAGGCGAGG+AGG - chr1_4:4733146-4733165 Msa0145110:intron 50.0%
!! CGAGTGCCTTTTCAGGAAGA+CGG - chr1_4:4733169-4733188 Msa0145110:intron 50.0%
!! GAGTGCCTTTTCAGGAAGAC+GGG - chr1_4:4733170-4733189 Msa0145110:intron 50.0%
GCTGCAGAACCTCCTCAAAA+GGG + chr1_4:4733402-4733421 None:intergenic 50.0%
AGCTGCAGAACCTCCTCAAA+AGG + chr1_4:4733403-4733422 None:intergenic 50.0%
GCAGCTCTATAACAAGGCAG+AGG - chr1_4:4733417-4733436 Msa0145110:three_prime_UTR 50.0%
TAACAAGGCAGAGGACAGCA+TGG - chr1_4:4733426-4733445 Msa0145110:three_prime_UTR 50.0%
GCAGAGGACAGCATGGAAAA+AGG - chr1_4:4733433-4733452 Msa0145110:three_prime_UTR 50.0%
GTTGATGTGGGAGGAGATTG+AGG - chr1_4:4733459-4733478 Msa0145110:exon 50.0%
! TGGGTTTGCACGGTCTTTTC+AGG - chr1_4:4733539-4733558 Msa0145110:CDS 50.0%
! GGGTTTGCACGGTCTTTTCA+GGG - chr1_4:4733540-4733559 Msa0145110:CDS 50.0%
!! CCCAAAATGTTTTGGGCAGC+AGG + chr1_4:4734762-4734781 None:intergenic 50.0%
TGAAATGGCACCGCAAAGCT+TGG - chr1_4:4734910-4734929 Msa0145110:CDS 50.0%
CAACCAAGCACCAAGCTTTG+CGG + chr1_4:4734923-4734942 None:intergenic 50.0%
!! GAGGTATTGTGTTGGCCACT+AGG - chr1_4:4735067-4735086 Msa0145110:CDS 50.0%
! ATTGTGTTGGCCACTAGGAC+TGG - chr1_4:4735072-4735091 Msa0145110:CDS 50.0%
! TTGTGTTGGCCACTAGGACT+GGG - chr1_4:4735073-4735092 Msa0145110:CDS 50.0%
CTATCCAAACCCAGTCCTAG+TGG + chr1_4:4735085-4735104 None:intergenic 50.0%
! AGGGGGGGTATATGTTCTGA+TGG - chr1_4:4735730-4735749 Msa0145110:five_prime_UTR 50.0%
AGATCGATGGGGAAACCAGC+TGG - chr1_4:4731795-4731814 Msa0145110:three_prime_UTR 55.0%
TTGCTCTGCAAGTTTCGCCG+AGG - chr1_4:4732120-4732139 Msa0145110:intron 55.0%
ACTTTCCTAAACCGCGCAGC+AGG + chr1_4:4732359-4732378 None:intergenic 55.0%
AGGGCATAAAGGAGAAGGCG+AGG - chr1_4:4732409-4732428 Msa0145110:intron 55.0%
AAGGAGAAGGCGAGGAAGAG+CGG - chr1_4:4732417-4732436 Msa0145110:intron 55.0%
GCTGAGGGTTGTCATGTGCT+TGG - chr1_4:4732770-4732789 Msa0145110:intron 55.0%
CCGGCTGTATATTACGCAGG+TGG - chr1_4:4732799-4732818 Msa0145110:intron 55.0%
GAGTAGTGGTGAGGTGAGAG+GGG - chr1_4:4732856-4732875 Msa0145110:intron 55.0%
GTGAGGTGAGAGGGGAGAAT+GGG - chr1_4:4732864-4732883 Msa0145110:intron 55.0%
TGAGGTGAGAGGGGAGAATG+GGG - chr1_4:4732865-4732884 Msa0145110:intron 55.0%
CTCGACCCGTCTTCCTGAAA+AGG + chr1_4:4733178-4733197 None:intergenic 55.0%
AGGAGTCCCTCGTAGAAGTC+CGG + chr1_4:4733298-4733317 None:intergenic 55.0%
! TACGAGGGACTCCTAGCTCT+TGG - chr1_4:4733304-4733323 Msa0145110:intron 55.0%
! ACGAGGGACTCCTAGCTCTT+GGG - chr1_4:4733305-4733324 Msa0145110:intron 55.0%
!! CGAAGTTGGCCCTTTTGAGG+AGG - chr1_4:4733390-4733409 Msa0145110:three_prime_UTR 55.0%
GCTAGGACTACCAACATGGG+AGG - chr1_4:4733666-4733685 Msa0145110:intron 55.0%
GGAACACGCCGACGAAACAA+TGG + chr1_4:4733981-4734000 None:intergenic 55.0%
TTGGTCTCTGCTGTGCTCTG+TGG + chr1_4:4734856-4734875 None:intergenic 55.0%
GAGCACAGCAGAGACCAACA+AGG - chr1_4:4734858-4734877 Msa0145110:CDS 55.0%
!! CGCAAAGCTTGGTGCTTGGT+TGG - chr1_4:4734921-4734940 Msa0145110:CDS 55.0%
TTGGCCACTAGGACTGGGTT+TGG - chr1_4:4735078-4735097 Msa0145110:CDS 55.0%
TTCCTAAACCGCGCAGCAGG+CGG + chr1_4:4732356-4732375 None:intergenic 60.0%
GGTGAGGTGAGAGGGGAGAA+TGG - chr1_4:4732863-4732882 Msa0145110:intron 60.0%
GTGAGAGGGGAGAATGGGGT+TGG - chr1_4:4732869-4732888 Msa0145110:intron 60.0%
GGGGAGAATGGGGTTGGAGA+AGG - chr1_4:4732875-4732894 Msa0145110:intron 60.0%
! GAGGAGGCGAGTGCCTTTTC+AGG - chr1_4:4733162-4733181 Msa0145110:intron 60.0%
!! GCACCGCAAAGCTTGGTGCT+TGG - chr1_4:4734917-4734936 Msa0145110:CDS 60.0%
AAGTAGAGCCGCCTGCTGCG+CGG - chr1_4:4732345-4732364 Msa0145110:intron 65.0%
AGCCGCCTGCTGCGCGGTTT+AGG - chr1_4:4732351-4732370 Msa0145110:intron 70.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 4731549 4735953 4731549 ID=Msa0145110;Name=Msa0145110
chr1_4 mRNA 4731549 4735953 4731549 ID=Msa0145110-mRNA-1;Parent=Msa0145110;Name=Msa0145110-mRNA-1;_AED=0.01;_eAED=0.01;_QI=252|1|1|1|0.5|0.33|3|443|709
chr1_4 exon 4731549 4731900 4731549 ID=Msa0145110-mRNA-1:exon:1985;Parent=Msa0145110-mRNA-1
chr1_4 exon 4733380 4733607 4733380 ID=Msa0145110-mRNA-1:exon:1984;Parent=Msa0145110-mRNA-1
chr1_4 exon 4733709 4735953 4733709 ID=Msa0145110-mRNA-1:exon:1983;Parent=Msa0145110-mRNA-1
chr1_4 five_prime_UTR 4735702 4735953 4735702 ID=Msa0145110-mRNA-1:five_prime_utr;Parent=Msa0145110-mRNA-1
chr1_4 CDS 4733709 4735701 4733709 ID=Msa0145110-mRNA-1:cds;Parent=Msa0145110-mRNA-1
chr1_4 CDS 4733471 4733607 4733471 ID=Msa0145110-mRNA-1:cds;Parent=Msa0145110-mRNA-1
chr1_4 three_prime_UTR 4733380 4733470 4733380 ID=Msa0145110-mRNA-1:three_prime_utr;Parent=Msa0145110-mRNA-1
chr1_4 three_prime_UTR 4731549 4731900 4731549 ID=Msa0145110-mRNA-1:three_prime_utr;Parent=Msa0145110-mRNA-1
Gene Sequence

>Msa0145110

ATGGGGAAACCAGCTGGAAAAAAGAAGGAACATGAATCACCAAAATCAAACAACAACAAGAACAAAGGTTACGAACGTTCAACATCATTCGACGATGACACAGCCATGTTCATCAACATGTCACAAGAATTAAGAGAAGAAGGTAACAAACTTTTCTTCCAAAAAAAAGACAACGAAGGAGCTATGTTAAAGTACGAAAAAGCCCTCAAACTCTTACCCAAAAACCACATAGATGTTGCACATCTTCACACCAACATGGCCATGTGTTATATGCAATTGGGTCTTGGCGAATACCCTCGAGCGATTAACGAGTGCAATCTTGCTCTGCAAGTTTCGCCGAGGTATAGTAAAGCTCTTCTTAGAAGAGCCAAGTGTTACGAGGCGTTGAATCGGTTGGATTTGGCTATGAGAGATGTTAGAGTTGTTTTGAATGCTGAGCCGAATAATTCAACTGCGTTGGAGATTCTTGATAGTTTGAGGATTACTATGGAGGAGAAAGGGATTACTATTGATGAGACTGAGATTGCTTTGGCTGCTATTCAGCAAGTAGAGCCGCCTGCTGCGCGGTTTAGGAAAGTTGTTAGGGAGAAGATTAATAAGAAGAAGAAAGGGCATAAAGGAGAAGGCGAGGAAGAGCGGAAAAGTAAGAGTGTTGTTGAGAAGAAAGCCACCAATGTTGGAAATGTTAATGTTAATGTTAAGGTGAAGGGTGAAGATTCGAAGGATAAGGTTACGGATAAGGATAAGGATAGTAACGAAGTTGTTAAGGAAGATAAAGCGGTTACTAGGACTGTGAAGTTGATATATGGAGAGGATATTAGATGGGCGCAGTTGCCGGTGAATTGTAGTATGAAGTTGGTGAGAGATGTGATAAGGGATAGGTATCCGGGGTTAAAGGGTGTTCTTGTGAAGTATAAGGATAGGGAAGGTGATTTGGTTACTATTACTACTACTTCTGAGTTGAGGTTAGCTGAGGGTTGTCATGTGCTTGGTTCGATCCGGCTGTATATTACGCAGGTGGATTTGGATATGGAGCCGTGTTATGATGAAAAGATGAGTAGTGGTGAGGTGAGAGGGGAGAATGGGGTTGGAGAAGGAGATAAGGGTGTTGGGGCTAATAGGATGATTACTGTGGAGGAATGGCTTGTTCAGTTTGCGAGGCTGTTTAAGAACCATGTTGGGTTTGATTCTGATTCGTATCTGGATATTCATGAGGTTGGGATGAAGATATATTCGGAGGCGATGGAGGATTCAGTGACGAATGATGGTGCTCAAGAGCTGTTTGATATTGCTGCGGATAAGTTTCAAGAGATGGCTGCTTTGGCTTTGTTTAATTGGGGGAATGTTCACTTGTCTAAGGCGAGGAGGCGAGTGCCTTTTCAGGAAGACGGGTCGAGAGAAGCATCTCTCGAGCATGTTAAAGCTGGATATGAATGGGCTACGAAGGAGTATAAGGAAGCAGAAATGAGATACGAAGAATCTGTGAAAATCAAACCGGACTTCTACGAGGGACTCCTAGCTCTTGGGTATCAACAGTTTGAGCAAGCAAAGCTATGCTGGTGTTATTTAATTGTAAACAATAAGAATATCGAAGTTGGCCCTTTTGAGGAGGTTCTGCAGCTCTATAACAAGGCAGAGGACAGCATGGAAAAAGGGATGTTGATGTGGGAGGAGATTGAGGAACAGCGTTTGAATGGACTCTCTAAGTTAGATAAATATAATGCACAGTTAGAGAAAATGGGTTTGCACGGTCTTTTCAGGGATGTTTCTTCTGAAGAAGCTGAAGATCAGGCTTCAAAGATGAGGATACAGATATACCTTTTATGGGGCACCTTATTGTATGAGCGTTCTGTTGTGGAATTTAAGCTAGGACTACCAACATGGGAGGAATGTTTGGAGGTTGCTGTTGAAAAGTTTGAACTAGCCGGAGCTTCTACAACTGACATTGGTGTCATGATAAAGAACCATTGTTCTAATGAAACAGCAATGGAAGGGTTCAAAATCGATGACATAGTGCAAGCATGGAATGAGATGTATGATGGGTGGCAGTTTGATGTTCCAACTTTCCGACTCGAACCATTGTTTCGTCGGCGTGTTCCAAGACTCCATTACATCCTGGAACAATTTTAA
Protein sequence

>Msa0145110

MGKPAGKKKEHESPKSNNNKNKGYERSTSFDDDTAMFINMSQELREEGNKLFFQKKDNEGAMLKYEKALKLLPKNHIDVAHLHTNMAMCYMQLGLGEYPRAINECNLALQVSPRYSKALLRRAKCYEALNRLDLAMRDVRVVLNAEPNNSTALEILDSLRITMEEKGITIDETEIALAAIQQVEPPAARFRKVVREKINKKKKGHKGEGEEERKSKSVVEKKATNVGNVNVNVKVKGEDSKDKVTDKDKDSNEVVKEDKAVTRTVKLIYGEDIRWAQLPVNCSMKLVRDVIRDRYPGLKGVLVKYKDREGDLVTITTTSELRLAEGCHVLGSIRLYITQVDLDMEPCYDEKMSSGEVRGENGVGEGDKGVGANRMITVEEWLVQFARLFKNHVGFDSDSYLDIHEVGMKIYSEAMEDSVTNDGAQELFDIAADKFQEMAALALFNWGNVHLSKARRRVPFQEDGSREASLEHVKAGYEWATKEYKEAEMRYEESVKIKPDFYEGLLALGYQQFEQAKLCWCYLIVNNKNIEVGPFEEVLQLYNKAEDSMEKGMLMWEEIEEQRLNGLSKLDKYNAQLEKMGLHGLFRDVSSEEAEDQASKMRIQIYLLWGTLLYERSVVEFKLGLPTWEECLEVAVEKFELAGASTTDIGVMIKNHCSNETAMEGFKIDDIVQAWNEMYDGWQFDVPTFRLEPLFRRRVPRLHYILEQF*