Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0208320 | XP_004488534.1 | 100.000 | 128 | 0 | 0 | 1 | 128 | 1 | 128 | 8.35e-88 | 261 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0208320 | sp|Q5XH16|NH2L1_XENLA | 81.250 | 128 | 24 | 0 | 1 | 128 | 1 | 128 | 1.09e-73 | 218 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0208320 | A0A1S2XFE9 | 100.000 | 128 | 0 | 0 | 1 | 128 | 1 | 128 | 3.99e-88 | 261 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0208190 | Msa0208320 | 0.998147 | 2.664278e-257 | -8.615850e-47 |
| Msa0208290 | Msa0208320 | 0.976824 | 1.433858e-142 | -8.615850e-47 |
| Msa0208320 | Msa0350070 | -0.813895 | 2.030289e-51 | -8.615850e-47 |
| Msa0208320 | Msa0375310 | 0.803813 | 2.913708e-49 | -8.615850e-47 |
| Msa0208320 | Msa0396640 | -0.814668 | 1.369971e-51 | -8.615850e-47 |
| Msa0208320 | Msa0444170 | -0.821973 | 3.036281e-53 | -8.615850e-47 |
| Msa0208320 | Msa0491730 | -0.808239 | 3.415185e-50 | -8.615850e-47 |
| Msa0208320 | Msa0951700 | 0.809656 | 1.699003e-50 | -8.615850e-47 |
| Msa0208320 | Msa1085420 | 0.804887 | 1.740530e-49 | -8.615850e-47 |
| Msa0208320 | Msa1211820 | 0.883648 | 3.756994e-71 | -8.615850e-47 |
| Msa0208320 | Msa1299690 | 0.833820 | 4.282009e-56 | -8.615850e-47 |
| Msa0208320 | Msa1332230 | 0.858626 | 7.240325e-63 | -8.615850e-47 |
| Msa0208320 | Msa1433590 | 0.848718 | 5.127353e-60 | -8.615850e-47 |
| Msa0208320 | Msa1441220 | -0.810357 | 1.199841e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0208320 | MtrunA17_Chr2g0307081 | 100.000 | 128 | 0 | 0 | 1 | 128 | 1 | 128 | 7.68e-92 | 261 |
| Msa0208320 | MtrunA17_Chr4g0063571 | 97.656 | 128 | 3 | 0 | 1 | 128 | 1 | 128 | 3.04e-89 | 254 |
| Msa0208320 | MtrunA17_Chr4g0061981 | 34.821 | 112 | 72 | 1 | 8 | 118 | 21 | 132 | 9.29e-17 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0208320 | AT4G22380.1 | 93.750 | 128 | 8 | 0 | 1 | 128 | 1 | 128 | 2.87e-77 | 224 |
| Msa0208320 | AT5G20160.1 | 92.969 | 128 | 9 | 0 | 1 | 128 | 1 | 128 | 1.36e-76 | 223 |
| Msa0208320 | AT4G12600.1 | 91.406 | 128 | 11 | 0 | 1 | 128 | 1 | 128 | 2.73e-74 | 217 |
| Msa0208320 | AT5G20160.2 | 74.375 | 160 | 9 | 1 | 1 | 128 | 1 | 160 | 6.99e-70 | 207 |
| Msa0208320 | AT4G12600.2 | 56.284 | 183 | 25 | 2 | 1 | 128 | 1 | 183 | 1.83e-49 | 156 |
| Msa0208320 | AT5G20160.3 | 64.815 | 108 | 6 | 1 | 1 | 76 | 1 | 108 | 6.45e-31 | 107 |
| Msa0208320 | AT5G08180.2 | 36.641 | 131 | 74 | 1 | 5 | 126 | 21 | 151 | 3.66e-23 | 88.6 |
| Msa0208320 | AT5G08180.1 | 36.641 | 131 | 74 | 1 | 5 | 126 | 21 | 151 | 3.66e-23 | 88.6 |
Find 50 sgRNAs with CRISPR-Local
Find 313 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACTTGTGTACACTATAAA+TGG | 0.179279 | 2_1:+43027115 | Msa0208320:three_prime_UTR |
| AGAGAAGAGGCTTAGGGTTT+TGG | 0.218136 | 2_1:-43023182 | None:intergenic |
| ATGGATTAATGTTATTCTAT+TGG | 0.230931 | 2_1:+43027134 | Msa0208320:three_prime_UTR |
| TCAGCCAAAGGGTAAGCTTT+TGG | 0.274630 | 2_1:-43023349 | None:intergenic |
| TAATTACAAGCAACTCAAAA+AGG | 0.282256 | 2_1:+43023417 | Msa0208320:CDS |
| TGGATTAATGTTATTCTATT+GGG | 0.287540 | 2_1:+43027135 | Msa0208320:three_prime_UTR |
| TTGATCTGAAAGATTGATTT+CGG | 0.342588 | 2_1:+43026924 | Msa0208320:exon |
| TCCTTTACTCGCTGAGGATA+AGG | 0.365424 | 2_1:+43023693 | Msa0208320:CDS |
| AATCAAAAGCACACCTTCAT+TGG | 0.389057 | 2_1:-43023443 | None:intergenic |
| TGTAAGAAGAGAAGAGGCTT+AGG | 0.389455 | 2_1:-43023189 | None:intergenic |
| ACAACTTACGATAACGATAA+TGG | 0.396702 | 2_1:+43023375 | Msa0208320:CDS |
| AAAGATTGATTTCGGTATGA+TGG | 0.399664 | 2_1:+43026932 | Msa0208320:exon |
| TTTAAGTTGACTTCCCTCAT+TGG | 0.429117 | 2_1:-43026769 | None:intergenic |
| CATTTCTGAGTTTGTTGTGA+TGG | 0.445083 | 2_1:+43023633 | Msa0208320:CDS |
| GCACGGACACTCCTCGGATT+AGG | 0.460013 | 2_1:+43027264 | Msa0208320:three_prime_UTR |
| TTTGATGGGACAAATACATA+AGG | 0.470260 | 2_1:-43026687 | None:intergenic |
| ATATTTATATCCACTGTTTG+AGG | 0.472855 | 2_1:+43027049 | Msa0208320:three_prime_UTR |
| GTAAGAAGAGAAGAGGCTTA+GGG | 0.476331 | 2_1:-43023188 | None:intergenic |
| GAATCCAAAAGCTTACCCTT+TGG | 0.476923 | 2_1:+43023345 | Msa0208320:CDS |
| CGTCCAGTCAAAGCCTCAAA+AGG | 0.482572 | 2_1:-43026980 | None:intergenic |
| ATCTCAAATACAACAACTAA+AGG | 0.485983 | 2_1:+43026791 | Msa0208320:CDS |
| AGAAGAAATGTGCGCGCAGT+AGG | 0.493285 | 2_1:-43023146 | None:intergenic |
| TCCTCGGATTAGGCGTGTCC+CGG | 0.509515 | 2_1:+43027274 | Msa0208320:three_prime_UTR |
| AAGATTGATTTCGGTATGAT+GGG | 0.511888 | 2_1:+43026933 | Msa0208320:three_prime_UTR |
| CACTTTCAATCCTCAAACAG+TGG | 0.519537 | 2_1:-43027059 | None:intergenic |
| CGCGCAGTAGGGTTTATAAG+AGG | 0.525807 | 2_1:-43023134 | None:intergenic |
| GTCACAGAACATGCAATCAC+TGG | 0.528661 | 2_1:-43026744 | None:intergenic |
| ACCTTATCCTCAGCGAGTAA+AGG | 0.534236 | 2_1:-43023694 | None:intergenic |
| CAGAACATGCAATCACTGGC+CGG | 0.535766 | 2_1:-43026740 | None:intergenic |
| GAGTTGTGTTCAACTCGAAA+AGG | 0.541959 | 2_1:+43027002 | Msa0208320:three_prime_UTR |
| GTCCCATCAAAACAAGCACT+TGG | 0.547834 | 2_1:+43026699 | Msa0208320:CDS |
| GATTAGGCGTGTCCCGGTGT+CGG | 0.552386 | 2_1:+43027280 | Msa0208320:three_prime_UTR |
| TCATCTTCCTTTACTCGCTG+AGG | 0.553114 | 2_1:+43023687 | Msa0208320:CDS |
| GACGAGCATGTGGTGTGACC+CGG | 0.557034 | 2_1:+43026721 | Msa0208320:CDS |
| TAAGTTGTGCATCAGCCAAA+GGG | 0.569151 | 2_1:-43023360 | None:intergenic |
| CACGGACATCGGACATGACA+CGG | 0.571607 | 2_1:-43027383 | None:intergenic |
| AGAACATGCAATCACTGGCC+GGG | 0.572135 | 2_1:-43026739 | None:intergenic |
| GAAGAAATGTGCGCGCAGTA+GGG | 0.573757 | 2_1:-43023145 | None:intergenic |
| ATCACATAATTATCCGACAC+CGG | 0.578399 | 2_1:-43027293 | None:intergenic |
| GTAAGTTGTGCATCAGCCAA+AGG | 0.580950 | 2_1:-43023361 | None:intergenic |
| ACGGATACGGACACGGACAT+CGG | 0.602411 | 2_1:-43027394 | None:intergenic |
| CAAGCACTTGGACGAGCATG+TGG | 0.613075 | 2_1:+43026711 | Msa0208320:CDS |
| ACATGACACGGACACTGACA+CGG | 0.628121 | 2_1:-43027371 | None:intergenic |
| ACCGGGACACGCCTAATCCG+AGG | 0.629910 | 2_1:-43027275 | None:intergenic |
| GATTGATGTAAGAAGAGAAG+AGG | 0.636011 | 2_1:-43023195 | None:intergenic |
| TGTTCTGTGACAACCAATGA+GGG | 0.643609 | 2_1:+43026756 | Msa0208320:CDS |
| TCACATAATTATCCGACACC+GGG | 0.643761 | 2_1:-43027292 | None:intergenic |
| AGATGAAGAAGAATCTCAAG+TGG | 0.658274 | 2_1:-43023670 | None:intergenic |
| ATGTTCTGTGACAACCAATG+AGG | 0.691643 | 2_1:+43026755 | Msa0208320:CDS |
| GCTACAAAGACACTTAACAG+AGG | 0.744755 | 2_1:+43023610 | Msa0208320:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTAAAAAAAATAAAAAAAT+AGG | - | chr2_1:43023743-43023762 | None:intergenic | 0.0% |
| !!! | TTATTTTTTATTTTTTTTTA+TGG | + | chr2_1:43023845-43023864 | Msa0208320:intron | 0.0% |
| !!! | TATTTTTTATTTTTTTTTAT+GGG | + | chr2_1:43023846-43023865 | Msa0208320:intron | 0.0% |
| !! | AATAATTCAAAAAAATGAAT+AGG | - | chr2_1:43023257-43023276 | None:intergenic | 10.0% |
| !!! | TATTAAAATGATTTATGTTT+TGG | + | chr2_1:43024396-43024415 | Msa0208320:intron | 10.0% |
| !!! | ATATCAATTTTATATTACAA+TGG | + | chr2_1:43025519-43025538 | Msa0208320:intron | 10.0% |
| !!! | TATCAATTTTATATTACAAT+GGG | + | chr2_1:43025520-43025539 | Msa0208320:intron | 10.0% |
| !!! | ATTTTTATTTTCAGTTTCTA+TGG | + | chr2_1:43023486-43023505 | Msa0208320:intron | 15.0% |
| !!! | TAATTGAATTCTGATTATTT+TGG | + | chr2_1:43024334-43024353 | Msa0208320:intron | 15.0% |
| !! | TGTATTCTATTTAATTAGTT+TGG | + | chr2_1:43024596-43024615 | Msa0208320:intron | 15.0% |
| !!! | CATTGAATTTCTAATTTTTT+TGG | - | chr2_1:43024850-43024869 | None:intergenic | 15.0% |
| !! | ACAAAAATAATCATAATTCA+AGG | + | chr2_1:43024975-43024994 | Msa0208320:intron | 15.0% |
| !!! | TATTTTAATTGAAAAATTGG+TGG | + | chr2_1:43025444-43025463 | Msa0208320:intron | 15.0% |
| !!! | TTTAATGGAAATTGTTTTAT+TGG | + | chr2_1:43025873-43025892 | Msa0208320:intron | 15.0% |
| !! | TATTAATTAGAGTTATAAAG+GGG | - | chr2_1:43026231-43026250 | None:intergenic | 15.0% |
| !! | GTATTAATTAGAGTTATAAA+GGG | - | chr2_1:43026232-43026251 | None:intergenic | 15.0% |
| !! | AGTATTAATTAGAGTTATAA+AGG | - | chr2_1:43026233-43026252 | None:intergenic | 15.0% |
| !! | TGAAAATTCAAATAATTACA+TGG | - | chr2_1:43026660-43026679 | None:intergenic | 15.0% |
| !! | TAAAAAGAAAAAGTGGTATT+AGG | + | chr2_1:43023510-43023529 | Msa0208320:intron | 20.0% |
| !! | AAAAAGAAAAAGTGGTATTA+GGG | + | chr2_1:43023511-43023530 | Msa0208320:intron | 20.0% |
| !! | TAAAGTCTAAACAAATCAAA+GGG | - | chr2_1:43024231-43024250 | None:intergenic | 20.0% |
| !! | TTAAAGTCTAAACAAATCAA+AGG | - | chr2_1:43024232-43024251 | None:intergenic | 20.0% |
| !!! | AAATTGTTTTATTGGTAAGT+TGG | + | chr2_1:43025881-43025900 | Msa0208320:intron | 20.0% |
| !! | ATAAGAAATTTGATAAGGTA+AGG | - | chr2_1:43025959-43025978 | None:intergenic | 20.0% |
| !! | ACTTGATAAGAAATTTGATA+AGG | - | chr2_1:43025964-43025983 | None:intergenic | 20.0% |
| !! | TTATCAAGTAATATGTGTAA+TGG | + | chr2_1:43025975-43025994 | Msa0208320:intron | 20.0% |
| !!! | GACACTTTTTTTTTGATAAA+TGG | - | chr2_1:43026193-43026212 | None:intergenic | 20.0% |
| !! | AAAGTGGAATATATTGAATT+GGG | - | chr2_1:43026268-43026287 | None:intergenic | 20.0% |
| !! | TTAATTTATGACAGTTGAAA+AGG | + | chr2_1:43026627-43026646 | Msa0208320:intron | 20.0% |
| !! | ATTATAACAGCTAATAAAGT+TGG | - | chr2_1:43026855-43026874 | None:intergenic | 20.0% |
| !!! | ATGGATTAATGTTATTCTAT+TGG | + | chr2_1:43027134-43027153 | Msa0208320:three_prime_UTR | 20.0% |
| !! | TGGATTAATGTTATTCTATT+GGG | + | chr2_1:43027135-43027154 | Msa0208320:three_prime_UTR | 20.0% |
| !!! | ATTTTTCACTCTTGTTATTT+TGG | + | chr2_1:43027185-43027204 | Msa0208320:three_prime_UTR | 20.0% |
| ! | CAAAAAAATGAATAGGAGAA+AGG | - | chr2_1:43023250-43023269 | None:intergenic | 25.0% |
| ! | GAATGAAGAAAATTGAGAAA+CGG | - | chr2_1:43023289-43023308 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTTTGTTGCAGAC+AGG | + | chr2_1:43023313-43023332 | Msa0208320:intron | 25.0% |
| ! | TAATTACAAGCAACTCAAAA+AGG | + | chr2_1:43023417-43023436 | Msa0208320:CDS | 25.0% |
| ! | AATTACAAGCAACTCAAAAA+GGG | + | chr2_1:43023418-43023437 | Msa0208320:CDS | 25.0% |
| ! | CTATGGTTAAAAAGAAAAAG+TGG | + | chr2_1:43023503-43023522 | Msa0208320:intron | 25.0% |
| ! | AATAGGCAATTAACATTTGT+TGG | - | chr2_1:43023726-43023745 | None:intergenic | 25.0% |
| !!! | AAATATGTCTGTGTTTTTGA+AGG | + | chr2_1:43023760-43023779 | Msa0208320:intron | 25.0% |
| !!! | AATATGTCTGTGTTTTTGAA+GGG | + | chr2_1:43023761-43023780 | Msa0208320:intron | 25.0% |
| !! | TCATTGAACTCTGATTATTT+TGG | + | chr2_1:43024449-43024468 | Msa0208320:intron | 25.0% |
| ! | TCCTGTATGAAAAAATAGTT+TGG | + | chr2_1:43024625-43024644 | Msa0208320:intron | 25.0% |
| !!! | TCCAAACTATTTTTTCATAC+AGG | - | chr2_1:43024629-43024648 | None:intergenic | 25.0% |
| ! | TAGTAAAGAGCTTAGAAATT+TGG | + | chr2_1:43024876-43024895 | Msa0208320:intron | 25.0% |
| ! | GATTATTAACCAGATTGTAA+TGG | - | chr2_1:43024914-43024933 | None:intergenic | 25.0% |
| ! | TAATATCATCAACACTAAAG+TGG | + | chr2_1:43024934-43024953 | Msa0208320:intron | 25.0% |
| ! | ATTTGAGGGATTTAAAAATG+AGG | + | chr2_1:43025587-43025606 | Msa0208320:intron | 25.0% |
| !!! | TTTTATTGGTAAGTTGGTAA+CGG | + | chr2_1:43025887-43025906 | Msa0208320:intron | 25.0% |
| !! | CTTTTTATCAAGTTTCTTTG+CGG | + | chr2_1:43025931-43025950 | Msa0208320:intron | 25.0% |
| ! | AGTATATGTATAAGACAATG+CGG | - | chr2_1:43026147-43026166 | None:intergenic | 25.0% |
| ! | ATAAATGGCTCAGTTATTAA+GGG | - | chr2_1:43026178-43026197 | None:intergenic | 25.0% |
| !!! | AAAGGGGAAAAAGTTATTTT+GGG | - | chr2_1:43026215-43026234 | None:intergenic | 25.0% |
| !! | TAAAGGGGAAAAAGTTATTT+TGG | - | chr2_1:43026216-43026235 | None:intergenic | 25.0% |
| ! | CAAAGTGGAATATATTGAAT+TGG | - | chr2_1:43026269-43026288 | None:intergenic | 25.0% |
| ! | AAATAAATGAGAGAGAAAAG+TGG | - | chr2_1:43026321-43026340 | None:intergenic | 25.0% |
| ! | ATATGTGTGAAATGAGAAAA+TGG | + | chr2_1:43026355-43026374 | Msa0208320:intron | 25.0% |
| !!! | TCCATGTCTTTTTAAAATTG+TGG | + | chr2_1:43026412-43026431 | Msa0208320:intron | 25.0% |
| ! | GAAAAACTTTAGATTTGTCT+TGG | - | chr2_1:43026473-43026492 | None:intergenic | 25.0% |
| !! | ATTTGGCATATATTGGTAAT+AGG | - | chr2_1:43026532-43026551 | None:intergenic | 25.0% |
| ! | TTTCTATTCATTCATGTTCT+TGG | + | chr2_1:43026600-43026619 | Msa0208320:intron | 25.0% |
| ! | ATCTCAAATACAACAACTAA+AGG | + | chr2_1:43026791-43026810 | Msa0208320:CDS | 25.0% |
| ! | GAATAATATCAAGCAAAACA+TGG | - | chr2_1:43026823-43026842 | None:intergenic | 25.0% |
| !! | TTGATCTGAAAGATTGATTT+CGG | + | chr2_1:43026924-43026943 | Msa0208320:exon | 25.0% |
| ! | ATATTTATATCCACTGTTTG+AGG | + | chr2_1:43027049-43027068 | Msa0208320:three_prime_UTR | 25.0% |
| ! | AAACTTGTGTACACTATAAA+TGG | + | chr2_1:43027115-43027134 | Msa0208320:three_prime_UTR | 25.0% |
| !! | TGTATTATTCTCTTTTAGCA+CGG | + | chr2_1:43027247-43027266 | Msa0208320:three_prime_UTR | 25.0% |
| ACAACTTACGATAACGATAA+TGG | + | chr2_1:43023375-43023394 | Msa0208320:CDS | 30.0% | |
| AATGTGGATAGAGATTTAGA+AGG | + | chr2_1:43023972-43023991 | Msa0208320:intron | 30.0% | |
| !! | TAGAAAGTATTTATGAGCCT+GGG | + | chr2_1:43023995-43024014 | Msa0208320:intron | 30.0% |
| TAACGTAGACATAATCACTA+TGG | + | chr2_1:43024249-43024268 | Msa0208320:intron | 30.0% | |
| ATACAAACAAAACAGACCAA+AGG | + | chr2_1:43024684-43024703 | Msa0208320:intron | 30.0% | |
| TACAAACAAAACAGACCAAA+GGG | + | chr2_1:43024685-43024704 | Msa0208320:intron | 30.0% | |
| TTGTTCATATATAAGCCCTT+TGG | - | chr2_1:43024703-43024722 | None:intergenic | 30.0% | |
| TCATCTTATCAACACATTAG+TGG | + | chr2_1:43024809-43024828 | Msa0208320:intron | 30.0% | |
| AAAGTTATACAGTAACCCAA+AGG | - | chr2_1:43025479-43025498 | None:intergenic | 30.0% | |
| ! | TTTGGGTTACTGTATAACTT+TGG | + | chr2_1:43025478-43025497 | Msa0208320:intron | 30.0% |
| !! | ACTGTATAACTTTGGTTCTT+TGG | + | chr2_1:43025486-43025505 | Msa0208320:intron | 30.0% |
| !! | CTGTATAACTTTGGTTCTTT+GGG | + | chr2_1:43025487-43025506 | Msa0208320:intron | 30.0% |
| TAGTTTAGATTCGTTTCTTG+TGG | + | chr2_1:43025631-43025650 | Msa0208320:intron | 30.0% | |
| ! | AAGATTTCCTTTTCCTTTTG+TGG | - | chr2_1:43025723-43025742 | None:intergenic | 30.0% |
| GGCATTACATAATTTCAACA+TGG | - | chr2_1:43025823-43025842 | None:intergenic | 30.0% | |
| GGTTAAAGTAATATGTGTAG+TGG | + | chr2_1:43025908-43025927 | Msa0208320:intron | 30.0% | |
| GTGTGATCGTTGAAAATTTA+AGG | - | chr2_1:43026118-43026137 | None:intergenic | 30.0% | |
| GATAAATGGCTCAGTTATTA+AGG | - | chr2_1:43026179-43026198 | None:intergenic | 30.0% | |
| AAGTGCTCTTGATAAGTATT+TGG | - | chr2_1:43026294-43026313 | None:intergenic | 30.0% | |
| AGAAAATGGCTCAGTTAATT+TGG | + | chr2_1:43026369-43026388 | Msa0208320:intron | 30.0% | |
| GAAAATGGCTCAGTTAATTT+GGG | + | chr2_1:43026370-43026389 | Msa0208320:intron | 30.0% | |
| !! | GCCACAATTTTAAAAAGACA+TGG | - | chr2_1:43026416-43026435 | None:intergenic | 30.0% |
| !!! | GTCTTTTTAAAATTGTGGCT+AGG | + | chr2_1:43026417-43026436 | Msa0208320:intron | 30.0% |
| TCAGTCAATTTGGCATATAT+TGG | - | chr2_1:43026539-43026558 | None:intergenic | 30.0% | |
| TGAATGAATAGAAATAGCTG+TGG | - | chr2_1:43026594-43026613 | None:intergenic | 30.0% | |
| TTTGATGGGACAAATACATA+AGG | - | chr2_1:43026690-43026709 | None:intergenic | 30.0% | |
| TGTTATAATGCCAACACATT+TGG | + | chr2_1:43026866-43026885 | Msa0208320:intron | 30.0% | |
| ! | AAAGATTGATTTCGGTATGA+TGG | + | chr2_1:43026932-43026951 | Msa0208320:exon | 30.0% |
| ! | AAGATTGATTTCGGTATGAT+GGG | + | chr2_1:43026933-43026952 | Msa0208320:three_prime_UTR | 30.0% |
| !!! | TTGTTATTTTGGATAAGTCG+AGG | + | chr2_1:43027196-43027215 | Msa0208320:three_prime_UTR | 30.0% |
| GATTGATGTAAGAAGAGAAG+AGG | - | chr2_1:43023198-43023217 | None:intergenic | 35.0% | |
| !! | GAAACAAGGTACCATTTTTG+GGG | - | chr2_1:43023228-43023247 | None:intergenic | 35.0% |
| !! | GGAAACAAGGTACCATTTTT+GGG | - | chr2_1:43023229-43023248 | None:intergenic | 35.0% |
| !! | AGGAAACAAGGTACCATTTT+TGG | - | chr2_1:43023230-43023249 | None:intergenic | 35.0% |
| TGAATAGGAGAAAGGAAACA+AGG | - | chr2_1:43023242-43023261 | None:intergenic | 35.0% | |
| ! | AATCAAAAGCACACCTTCAT+TGG | - | chr2_1:43023446-43023465 | None:intergenic | 35.0% |
| TGATTTATGACTAGTGCAAC+TGG | + | chr2_1:43023541-43023560 | Msa0208320:intron | 35.0% | |
| !! | CATTTCTGAGTTTGTTGTGA+TGG | + | chr2_1:43023633-43023652 | Msa0208320:CDS | 35.0% |
| AGATGAAGAAGAATCTCAAG+TGG | - | chr2_1:43023673-43023692 | None:intergenic | 35.0% | |
| AGCAGCAATAACAGTAACAA+TGG | - | chr2_1:43023815-43023834 | None:intergenic | 35.0% | |
| !! | GTAGAAAGTATTTATGAGCC+TGG | + | chr2_1:43023994-43024013 | Msa0208320:intron | 35.0% |
| CAAAAAACCAACAGAAGGAA+TGG | - | chr2_1:43024028-43024047 | None:intergenic | 35.0% | |
| !!! | TCCTTCTGTTGGTTTTTTGA+AGG | + | chr2_1:43024029-43024048 | Msa0208320:intron | 35.0% |
| TCCTTCAAAAAACCAACAGA+AGG | - | chr2_1:43024033-43024052 | None:intergenic | 35.0% | |
| !!! | TTGGTTTTTTGAAGGACATG+TGG | + | chr2_1:43024037-43024056 | Msa0208320:intron | 35.0% |
| !! | GAGTACTGAGCTTAGAAATT+TGG | - | chr2_1:43024422-43024441 | None:intergenic | 35.0% |
| AACGAAACAGACACAAGAAA+GGG | - | chr2_1:43024576-43024595 | None:intergenic | 35.0% | |
| AAACGAAACAGACACAAGAA+AGG | - | chr2_1:43024577-43024596 | None:intergenic | 35.0% | |
| AAAAACGAGCCATTACAATC+TGG | + | chr2_1:43024902-43024921 | Msa0208320:intron | 35.0% | |
| CGATGTCCATACAAATCAAA+AGG | + | chr2_1:43025019-43025038 | Msa0208320:intron | 35.0% | |
| !!! | TGGGAACCTTTTGATTTGTA+TGG | - | chr2_1:43025028-43025047 | None:intergenic | 35.0% |
| TTGTCATCTTGATGCTCTTT+GGG | - | chr2_1:43025047-43025066 | None:intergenic | 35.0% | |
| !! | AAAGAGCATCAAGATGACAA+GGG | + | chr2_1:43025047-43025066 | Msa0208320:intron | 35.0% |
| !! | TAGTTTACTGCATTTTGGTC+TGG | - | chr2_1:43025109-43025128 | None:intergenic | 35.0% |
| !! | CGTGTTAGTTTACTGCATTT+TGG | - | chr2_1:43025114-43025133 | None:intergenic | 35.0% |
| GCAAAAACCAATAGATGTAG+TGG | + | chr2_1:43025225-43025244 | Msa0208320:intron | 35.0% | |
| GTAGAAAGGATTTACGAGTT+TGG | - | chr2_1:43025258-43025277 | None:intergenic | 35.0% | |
| TGGAGATTCATAAGGTAGAA+AGG | - | chr2_1:43025272-43025291 | None:intergenic | 35.0% | |
| CCTCAAATGCATTAACATCA+GGG | - | chr2_1:43025575-43025594 | None:intergenic | 35.0% | |
| CCTGATGTTAATGCATTTGA+GGG | + | chr2_1:43025573-43025592 | Msa0208320:intron | 35.0% | |
| ! | CTTTGGGAGGGATTATTTAA+TGG | + | chr2_1:43025858-43025877 | Msa0208320:intron | 35.0% |
| !!! | TGGCAAAAAGATTGGTTTTG+GGG | - | chr2_1:43026057-43026076 | None:intergenic | 35.0% |
| !!! | CTGGCAAAAAGATTGGTTTT+GGG | - | chr2_1:43026058-43026077 | None:intergenic | 35.0% |
| !!! | ACTGGCAAAAAGATTGGTTT+TGG | - | chr2_1:43026059-43026078 | None:intergenic | 35.0% |
| !! | GATAAGTATTTGGTGCAAAG+TGG | - | chr2_1:43026284-43026303 | None:intergenic | 35.0% |
| ! | GGCATATATTGGTAATAGGT+CGG | - | chr2_1:43026528-43026547 | None:intergenic | 35.0% |
| AGTCTGGAAAAAACAGAACA+GGG | - | chr2_1:43026567-43026586 | None:intergenic | 35.0% | |
| TAGTCTGGAAAAAACAGAAC+AGG | - | chr2_1:43026568-43026587 | None:intergenic | 35.0% | |
| !! | TTTAAGTTGACTTCCCTCAT+TGG | - | chr2_1:43026772-43026791 | None:intergenic | 35.0% |
| TCAAGAATGTCCAAATGTGT+TGG | - | chr2_1:43026879-43026898 | None:intergenic | 35.0% | |
| TTTGGACATTCTTGATATGC+AGG | + | chr2_1:43026884-43026903 | Msa0208320:intron | 35.0% | |
| ATCACATAATTATCCGACAC+CGG | - | chr2_1:43027296-43027315 | None:intergenic | 35.0% | |
| GTAAGAAGAGAAGAGGCTTA+GGG | - | chr2_1:43023191-43023210 | None:intergenic | 40.0% | |
| TGTAAGAAGAGAAGAGGCTT+AGG | - | chr2_1:43023192-43023211 | None:intergenic | 40.0% | |
| GAATCCAAAAGCTTACCCTT+TGG | + | chr2_1:43023345-43023364 | Msa0208320:CDS | 40.0% | |
| TAAGTTGTGCATCAGCCAAA+GGG | - | chr2_1:43023363-43023382 | None:intergenic | 40.0% | |
| ACTAGTGCAACTGGATTGAA+TGG | + | chr2_1:43023550-43023569 | Msa0208320:intron | 40.0% | |
| GCTACAAAGACACTTAACAG+AGG | + | chr2_1:43023610-43023629 | Msa0208320:intron | 40.0% | |
| TTTATGGGGCAATGTTTGAG+AGG | + | chr2_1:43023861-43023880 | Msa0208320:intron | 40.0% | |
| !! | TAGTGATGGATCTTGTGAAG+TGG | + | chr2_1:43023919-43023938 | Msa0208320:intron | 40.0% |
| !!! | GTTTTTTGAAGGACATGTGG+AGG | + | chr2_1:43024040-43024059 | Msa0208320:intron | 40.0% |
| AATCACTGGTGGAACCAATA+TGG | + | chr2_1:43024068-43024087 | Msa0208320:intron | 40.0% | |
| TGGTGGAACCAATATGGTTT+GGG | + | chr2_1:43024074-43024093 | Msa0208320:intron | 40.0% | |
| GTCTGGTTAGATTATTGCGT+TGG | + | chr2_1:43024136-43024155 | Msa0208320:intron | 40.0% | |
| ! | TTATTGCGTTGGTCTGTTAG+TGG | + | chr2_1:43024147-43024166 | Msa0208320:intron | 40.0% |
| GGTAAACCATGGTTGAGAAT+TGG | + | chr2_1:43024168-43024187 | Msa0208320:intron | 40.0% | |
| CCTAAACCAATTCTCAACCA+TGG | - | chr2_1:43024177-43024196 | None:intergenic | 40.0% | |
| ! | CCATGGTTGAGAATTGGTTT+AGG | + | chr2_1:43024174-43024193 | Msa0208320:intron | 40.0% |
| CACTATGGAAAGACACTACT+AGG | + | chr2_1:43024264-43024283 | Msa0208320:intron | 40.0% | |
| CGTCTCATCAAACATGTAAG+TGG | - | chr2_1:43024372-43024391 | None:intergenic | 40.0% | |
| CTTGTCATCTTGATGCTCTT+TGG | - | chr2_1:43025048-43025067 | None:intergenic | 40.0% | |
| !! | CAAAGAGCATCAAGATGACA+AGG | + | chr2_1:43025046-43025065 | Msa0208320:intron | 40.0% |
| !!! | ATTGGTTTTTGCAAGACACG+TGG | - | chr2_1:43025217-43025236 | None:intergenic | 40.0% |
| ATCTCTGCCACTACATCTAT+TGG | - | chr2_1:43025235-43025254 | None:intergenic | 40.0% | |
| AAGGTGGATGGAGATTCATA+AGG | - | chr2_1:43025280-43025299 | None:intergenic | 40.0% | |
| ! | GAAAAAAAGGGTACATGGAG+AGG | - | chr2_1:43025308-43025327 | None:intergenic | 40.0% |
| ! | TAGCGGAAAAAAAGGGTACA+TGG | - | chr2_1:43025313-43025332 | None:intergenic | 40.0% |
| ! | GGTGAAGTAGCGGAAAAAAA+GGG | - | chr2_1:43025320-43025339 | None:intergenic | 40.0% |
| ! | TGGTGAAGTAGCGGAAAAAA+AGG | - | chr2_1:43025321-43025340 | None:intergenic | 40.0% |
| !! | AAGCTTGCTACTTCAACACT+GGG | - | chr2_1:43025360-43025379 | None:intergenic | 40.0% |
| !! | AAAGCTTGCTACTTCAACAC+TGG | - | chr2_1:43025361-43025380 | None:intergenic | 40.0% |
| CCCTGATGTTAATGCATTTG+AGG | + | chr2_1:43025572-43025591 | Msa0208320:intron | 40.0% | |
| CCCTCAAATGCATTAACATC+AGG | - | chr2_1:43025576-43025595 | None:intergenic | 40.0% | |
| GATTCGTTTCTTGTGGAAAG+TGG | + | chr2_1:43025638-43025657 | Msa0208320:intron | 40.0% | |
| TGTCGTGATTGCAAACATGT+TGG | - | chr2_1:43025672-43025691 | None:intergenic | 40.0% | |
| ATGTTTGCAATCACGACACA+TGG | + | chr2_1:43025674-43025693 | Msa0208320:intron | 40.0% | |
| TAGCGAACCACAAAAGGAAA+AGG | + | chr2_1:43025713-43025732 | Msa0208320:intron | 40.0% | |
| AACTCTAATGCATACCGCTT+GGG | - | chr2_1:43025772-43025791 | None:intergenic | 40.0% | |
| AAACTCTAATGCATACCGCT+TGG | - | chr2_1:43025773-43025792 | None:intergenic | 40.0% | |
| TTTCAACATGGCATACATGC+AGG | - | chr2_1:43025811-43025830 | None:intergenic | 40.0% | |
| CTTCCCACTTTGTGAACTTT+GGG | + | chr2_1:43025842-43025861 | Msa0208320:intron | 40.0% | |
| ! | ACCAATCTTTTTGCCAGTAG+CGG | + | chr2_1:43026061-43026080 | Msa0208320:intron | 40.0% |
| ATGGCTCAGTTATTAAGGGA+CGG | - | chr2_1:43026174-43026193 | None:intergenic | 40.0% | |
| ! | ATGGCTCAGTTAATTTGGGA+CGG | + | chr2_1:43026374-43026393 | Msa0208320:intron | 40.0% |
| CAGGGGAATATCAGTCAATT+TGG | - | chr2_1:43026549-43026568 | None:intergenic | 40.0% | |
| GTCTGGAAAAAACAGAACAG+GGG | - | chr2_1:43026566-43026585 | None:intergenic | 40.0% | |
| !!! | GTCCAAGTGCTTGTTTTGAT+GGG | - | chr2_1:43026704-43026723 | None:intergenic | 40.0% |
| ATGTTCTGTGACAACCAATG+AGG | + | chr2_1:43026755-43026774 | Msa0208320:CDS | 40.0% | |
| TGTTCTGTGACAACCAATGA+GGG | + | chr2_1:43026756-43026775 | Msa0208320:CDS | 40.0% | |
| GAGTTGTGTTCAACTCGAAA+AGG | + | chr2_1:43027002-43027021 | Msa0208320:three_prime_UTR | 40.0% | |
| CACTTTCAATCCTCAAACAG+TGG | - | chr2_1:43027062-43027081 | None:intergenic | 40.0% | |
| TCACATAATTATCCGACACC+GGG | - | chr2_1:43027295-43027314 | None:intergenic | 40.0% | |
| ! | AGAGAAGAGGCTTAGGGTTT+TGG | - | chr2_1:43023185-43023204 | None:intergenic | 45.0% |
| !! | ACAAGGTACCATTTTTGGGG+CGG | - | chr2_1:43023225-43023244 | None:intergenic | 45.0% |
| ! | TCAGCCAAAGGGTAAGCTTT+TGG | - | chr2_1:43023352-43023371 | None:intergenic | 45.0% |
| GTAAGTTGTGCATCAGCCAA+AGG | - | chr2_1:43023364-43023383 | None:intergenic | 45.0% | |
| !! | CTCAAAAAGGGTGCCAATGA+AGG | + | chr2_1:43023430-43023449 | Msa0208320:CDS | 45.0% |
| TCATCTTCCTTTACTCGCTG+AGG | + | chr2_1:43023687-43023706 | Msa0208320:CDS | 45.0% | |
| TCCTTTACTCGCTGAGGATA+AGG | + | chr2_1:43023693-43023712 | Msa0208320:CDS | 45.0% | |
| ACCTTATCCTCAGCGAGTAA+AGG | - | chr2_1:43023697-43023716 | None:intergenic | 45.0% | |
| ! | TGATGGATCTTGTGAAGTGG+CGG | + | chr2_1:43023922-43023941 | Msa0208320:intron | 45.0% |
| ! | TTGTGAAGTGGCGGGAAAAA+GGG | + | chr2_1:43023931-43023950 | Msa0208320:intron | 45.0% |
| TCTCTTGCCATTCCTTCTGT+TGG | + | chr2_1:43024018-43024037 | Msa0208320:intron | 45.0% | |
| !! | TTTTGAAGGACATGTGGAGG+CGG | + | chr2_1:43024043-43024062 | Msa0208320:intron | 45.0% |
| CTGGTGGAACCAATATGGTT+TGG | + | chr2_1:43024073-43024092 | Msa0208320:intron | 45.0% | |
| ! | TGGAACCAATATGGTTTGGG+CGG | + | chr2_1:43024077-43024096 | Msa0208320:intron | 45.0% |
| TGTTACCGCCCAAACCATAT+TGG | - | chr2_1:43024085-43024104 | None:intergenic | 45.0% | |
| GTAGGAAGAAATTTGCACGC+TGG | + | chr2_1:43024114-43024133 | Msa0208320:intron | 45.0% | |
| AAGAAATTTGCACGCTGGTC+TGG | + | chr2_1:43024119-43024138 | Msa0208320:intron | 45.0% | |
| GGTCTGTTAGTGGTAAACCA+TGG | + | chr2_1:43024157-43024176 | Msa0208320:intron | 45.0% | |
| !! | AAAGAGCATCAAGAGGACAG+GGG | - | chr2_1:43024203-43024222 | None:intergenic | 45.0% |
| !! | CAAAGAGCATCAAGAGGACA+GGG | - | chr2_1:43024204-43024223 | None:intergenic | 45.0% |
| CTGTCCTCTTGATGCTCTTT+GGG | + | chr2_1:43024203-43024222 | Msa0208320:intron | 45.0% | |
| CTTGAATCAAGTCTCTGCCA+TGG | + | chr2_1:43025073-43025092 | Msa0208320:intron | 45.0% | |
| !! | ACTGCATTTTGGTCTGGTAG+TGG | - | chr2_1:43025103-43025122 | None:intergenic | 45.0% |
| ACATGGAGAGGATTGAAAGG+TGG | - | chr2_1:43025296-43025315 | None:intergenic | 45.0% | |
| GGTACATGGAGAGGATTGAA+AGG | - | chr2_1:43025299-43025318 | None:intergenic | 45.0% | |
| !! | AGCTTGCTACTTCAACACTG+GGG | - | chr2_1:43025359-43025378 | None:intergenic | 45.0% |
| ! | AGCTTTTCTCCTCTCAAACG+TGG | + | chr2_1:43025375-43025394 | Msa0208320:intron | 45.0% |
| TTGGTGGAGCTCTATACCTT+TGG | + | chr2_1:43025460-43025479 | Msa0208320:intron | 45.0% | |
| TGGTGGAGCTCTATACCTTT+GGG | + | chr2_1:43025461-43025480 | Msa0208320:intron | 45.0% | |
| TGATCACATGACTTCCCAAG+CGG | + | chr2_1:43025755-43025774 | Msa0208320:intron | 45.0% | |
| CCAAAGTTCACAAAGTGGGA+AGG | - | chr2_1:43025844-43025863 | None:intergenic | 45.0% | |
| CCTTCCCACTTTGTGAACTT+TGG | + | chr2_1:43025841-43025860 | Msa0208320:intron | 45.0% | |
| CCTCCCAAAGTTCACAAAGT+GGG | - | chr2_1:43025848-43025867 | None:intergenic | 45.0% | |
| ! | CCACTTTGTGAACTTTGGGA+GGG | + | chr2_1:43025846-43025865 | Msa0208320:intron | 45.0% |
| ACCGCTACTGGCAAAAAGAT+TGG | - | chr2_1:43026065-43026084 | None:intergenic | 45.0% | |
| TGGCTCAGTTATTAAGGGAC+GGG | - | chr2_1:43026173-43026192 | None:intergenic | 45.0% | |
| ! | CTCAGTTAATTTGGGACGGA+GGG | + | chr2_1:43026378-43026397 | Msa0208320:intron | 45.0% |
| TTGTGGCTAGGATTACTCTG+CGG | + | chr2_1:43026429-43026448 | Msa0208320:intron | 45.0% | |
| ! | TTGGTAATAGGTCGGATCTC+AGG | - | chr2_1:43026520-43026539 | None:intergenic | 45.0% |
| AAATAGCTGTGGCTGTAGTC+TGG | - | chr2_1:43026583-43026602 | None:intergenic | 45.0% | |
| GTCCCATCAAAACAAGCACT+TGG | + | chr2_1:43026699-43026718 | Msa0208320:CDS | 45.0% | |
| !!! | CGTCCAAGTGCTTGTTTTGA+TGG | - | chr2_1:43026705-43026724 | None:intergenic | 45.0% |
| GTCACAGAACATGCAATCAC+TGG | - | chr2_1:43026747-43026766 | None:intergenic | 45.0% | |
| ! | TGCTGAATGCTCTCCTTTTG+AGG | + | chr2_1:43026967-43026986 | Msa0208320:three_prime_UTR | 45.0% |
| !!! | TCTCCTTTTGAGGCTTTGAC+TGG | + | chr2_1:43026977-43026996 | Msa0208320:three_prime_UTR | 45.0% |
| !! | AAAAATAAAAAATAAAACAA+AGG | - | chr2_1:43023840-43023859 | None:intergenic | 5.0% |
| !!! | ATTTTTTATTTTTTTTTATG+GGG | + | chr2_1:43023847-43023866 | Msa0208320:intron | 5.0% |
| !! | AAATAATAAAAAAAAAACAA+AGG | - | chr2_1:43025429-43025448 | None:intergenic | 5.0% |
| !!! | TATTATTTTAATTGAAAAAT+TGG | + | chr2_1:43025441-43025460 | Msa0208320:intron | 5.0% |
| CGCGCAGTAGGGTTTATAAG+AGG | - | chr2_1:43023137-43023156 | None:intergenic | 50.0% | |
| GAAGAAATGTGCGCGCAGTA+GGG | - | chr2_1:43023148-43023167 | None:intergenic | 50.0% | |
| AGAAGAAATGTGCGCGCAGT+AGG | - | chr2_1:43023149-43023168 | None:intergenic | 50.0% | |
| TGGGGCAATGTTTGAGAGGT+AGG | + | chr2_1:43023865-43023884 | Msa0208320:intron | 50.0% | |
| AAAGCGTGTTACCTCGACAC+TGG | + | chr2_1:43023891-43023910 | Msa0208320:intron | 50.0% | |
| AAGCGTGTTACCTCGACACT+GGG | + | chr2_1:43023892-43023911 | Msa0208320:intron | 50.0% | |
| GATGGATCTTGTGAAGTGGC+GGG | + | chr2_1:43023923-43023942 | Msa0208320:intron | 50.0% | |
| ! | CTTGTGAAGTGGCGGGAAAA+AGG | + | chr2_1:43023930-43023949 | Msa0208320:intron | 50.0% |
| CAGGGGAGAGGATTGAAATG+TGG | + | chr2_1:43023956-43023975 | Msa0208320:intron | 50.0% | |
| ATGTGGAGGCGGTTAATCAC+TGG | + | chr2_1:43024054-43024073 | Msa0208320:intron | 50.0% | |
| TTTGGGCGGTAACAGTGTCA+CGG | + | chr2_1:43024091-43024110 | Msa0208320:intron | 50.0% | |
| !! | CCAAAGAGCATCAAGAGGAC+AGG | - | chr2_1:43024205-43024224 | None:intergenic | 50.0% |
| CCTGTCCTCTTGATGCTCTT+TGG | + | chr2_1:43024202-43024221 | Msa0208320:intron | 50.0% | |
| !! | GGTCTGGTAGTGGTAAACCA+TGG | - | chr2_1:43025093-43025112 | None:intergenic | 50.0% |
| TTGGGCGGTGACAATGTCAA+GGG | - | chr2_1:43025162-43025181 | None:intergenic | 50.0% | |
| TTTGGGCGGTGACAATGTCA+AGG | - | chr2_1:43025163-43025182 | None:intergenic | 50.0% | |
| ! | TGGAACCAACATGGTTTGGG+CGG | - | chr2_1:43025177-43025196 | None:intergenic | 50.0% |
| CGGTGGAACCAACATGGTTT+GGG | - | chr2_1:43025180-43025199 | None:intergenic | 50.0% | |
| !! | CCAAACCATGTTGGTTCCAC+CGG | + | chr2_1:43025178-43025197 | Msa0208320:intron | 50.0% |
| ! | GGTTTTTGCAAGACACGTGG+CGG | - | chr2_1:43025214-43025233 | None:intergenic | 50.0% |
| GGAGAGGATTGAAAGGTGGA+TGG | - | chr2_1:43025292-43025311 | None:intergenic | 50.0% | |
| ! | TGGTGGATCTGGTGAAGTAG+CGG | - | chr2_1:43025330-43025349 | None:intergenic | 50.0% |
| CTACTTCAACACTGGGGTGA+TGG | - | chr2_1:43025353-43025372 | None:intergenic | 50.0% | |
| TGCGGTTAGCGAACCACAAA+AGG | + | chr2_1:43025707-43025726 | Msa0208320:intron | 50.0% | |
| CCCACTTTGTGAACTTTGGG+AGG | + | chr2_1:43025845-43025864 | Msa0208320:intron | 50.0% | |
| CCCTCCCAAAGTTCACAAAG+TGG | - | chr2_1:43025849-43025868 | None:intergenic | 50.0% | |
| TCACTAAGCTTCACCGCTAC+TGG | - | chr2_1:43026077-43026096 | None:intergenic | 50.0% | |
| CTCAGTTATTAAGGGACGGG+GGG | - | chr2_1:43026170-43026189 | None:intergenic | 50.0% | |
| GCTCAGTTATTAAGGGACGG+GGG | - | chr2_1:43026171-43026190 | None:intergenic | 50.0% | |
| GGCTCAGTTATTAAGGGACG+GGG | - | chr2_1:43026172-43026191 | None:intergenic | 50.0% | |
| ! | GCTCAGTTAATTTGGGACGG+AGG | + | chr2_1:43026377-43026396 | Msa0208320:intron | 50.0% |
| TCTGCGGTCAACTGTAAGCT+GGG | + | chr2_1:43026445-43026464 | Msa0208320:intron | 50.0% | |
| AGAACATGCAATCACTGGCC+GGG | - | chr2_1:43026742-43026761 | None:intergenic | 50.0% | |
| CAGAACATGCAATCACTGGC+CGG | - | chr2_1:43026743-43026762 | None:intergenic | 50.0% | |
| CGTCCAGTCAAAGCCTCAAA+AGG | - | chr2_1:43026983-43027002 | None:intergenic | 50.0% | |
| ! | CTTTTAGCACGGACACTCCT+CGG | + | chr2_1:43027258-43027277 | Msa0208320:three_prime_UTR | 50.0% |
| ACATGACACGGACACTGACA+CGG | - | chr2_1:43027374-43027393 | None:intergenic | 50.0% | |
| !! | GGCTTAGGGTTTTGGCGTGA+AGG | - | chr2_1:43023177-43023196 | None:intergenic | 55.0% |
| !!! | AGGTACCATTTTTGGGGCGG+CGG | - | chr2_1:43023222-43023241 | None:intergenic | 55.0% |
| GGGCGTGTCATGTGTGATTG+TGG | + | chr2_1:43023781-43023800 | Msa0208320:intron | 55.0% | |
| AGCGTGTTACCTCGACACTG+GGG | + | chr2_1:43023893-43023912 | Msa0208320:intron | 55.0% | |
| TCACTATCACCCCAGTGTCG+AGG | - | chr2_1:43023905-43023924 | None:intergenic | 55.0% | |
| ! | CGACACTGGGGTGATAGTGA+TGG | + | chr2_1:43023905-43023924 | Msa0208320:intron | 55.0% |
| ! | AGTGGCGGGAAAAAGGGTAC+AGG | + | chr2_1:43023937-43023956 | Msa0208320:intron | 55.0% |
| ! | GTGGCGGGAAAAAGGGTACA+GGG | + | chr2_1:43023938-43023957 | Msa0208320:intron | 55.0% |
| ! | TGGCGGGAAAAAGGGTACAG+GGG | + | chr2_1:43023939-43023958 | Msa0208320:intron | 55.0% |
| ! | GGAAAAAGGGTACAGGGGAG+AGG | + | chr2_1:43023944-43023963 | Msa0208320:intron | 55.0% |
| GAAGGAATGGCAAGAGACCC+AGG | - | chr2_1:43024015-43024034 | None:intergenic | 55.0% | |
| TGGAGGCGGTTAATCACTGG+TGG | + | chr2_1:43024057-43024076 | Msa0208320:intron | 55.0% | |
| TTGGGCGGTAACAGTGTCAC+GGG | + | chr2_1:43024092-43024111 | Msa0208320:intron | 55.0% | |
| !! | GGTGCCCAAAGAGCATCAAG+AGG | - | chr2_1:43024210-43024229 | None:intergenic | 55.0% |
| TGTCACCGCCCAAACCATGT+TGG | + | chr2_1:43025169-43025188 | Msa0208320:intron | 55.0% | |
| CCGGTGGAACCAACATGGTT+TGG | - | chr2_1:43025181-43025200 | None:intergenic | 55.0% | |
| ! | CTTCAACACTGGGGTGATGG+TGG | - | chr2_1:43025350-43025369 | None:intergenic | 55.0% |
| CAACAAGGGCCACGTTTGAG+AGG | - | chr2_1:43025387-43025406 | None:intergenic | 55.0% | |
| AGCAGCAGCAGCAGCAACAA+GGG | - | chr2_1:43025401-43025420 | None:intergenic | 55.0% | |
| ACACATGGCTTCCCACTGTG+CGG | + | chr2_1:43025689-43025708 | Msa0208320:intron | 55.0% | |
| TGGTTCGCTAACCGCACAGT+GGG | - | chr2_1:43025703-43025722 | None:intergenic | 55.0% | |
| CTCTGCGGTCAACTGTAAGC+TGG | + | chr2_1:43026444-43026463 | Msa0208320:intron | 55.0% | |
| CAAGCACTTGGACGAGCATG+TGG | + | chr2_1:43026711-43026730 | Msa0208320:CDS | 55.0% | |
| AATCGCCGCCGCCCCAAAAA+TGG | + | chr2_1:43023214-43023233 | Msa0208320:exon | 60.0% | |
| GCGGTAACAGTGTCACGGGT+AGG | + | chr2_1:43024096-43024115 | Msa0208320:intron | 60.0% | |
| !! | GAGCACCGGTGGAACCAACA+TGG | - | chr2_1:43025186-43025205 | None:intergenic | 60.0% |
| !! | TGGGGTGATGGTGGTGGATC+TGG | - | chr2_1:43025341-43025360 | None:intergenic | 60.0% |
| !! | CAACACTGGGGTGATGGTGG+TGG | - | chr2_1:43025347-43025366 | None:intergenic | 60.0% |
| CAGCAGCAGCAGCAGCAACA+AGG | - | chr2_1:43025402-43025421 | None:intergenic | 60.0% | |
| GTGGTTCGCTAACCGCACAG+TGG | - | chr2_1:43025704-43025723 | None:intergenic | 60.0% | |
| GACGAGCATGTGGTGTGACC+CGG | + | chr2_1:43026721-43026740 | Msa0208320:CDS | 60.0% | |
| GCACGGACACTCCTCGGATT+AGG | + | chr2_1:43027264-43027283 | Msa0208320:three_prime_UTR | 60.0% | |
| ! | TCCTCGGATTAGGCGTGTCC+CGG | + | chr2_1:43027274-43027293 | Msa0208320:three_prime_UTR | 60.0% |
| GATTAGGCGTGTCCCGGTGT+CGG | + | chr2_1:43027280-43027299 | Msa0208320:three_prime_UTR | 60.0% | |
| ACGTGGCGGCGATTGAGCAC+CGG | - | chr2_1:43025200-43025219 | None:intergenic | 65.0% | |
| ACCGGGACACGCCTAATCCG+AGG | - | chr2_1:43027278-43027297 | None:intergenic | 65.0% | |
| !! | TGGCGGCGATTGAGCACCGG+TGG | - | chr2_1:43025197-43025216 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 43023126 | 43027403 | 43023126 | ID=Msa0208320;Name=Msa0208320 |
| chr2_1 | mRNA | 43023126 | 43027403 | 43023126 | ID=Msa0208320-mRNA-1;Parent=Msa0208320;Name=Msa0208320-mRNA-1;_AED=0.16;_eAED=0.16;_QI=107|1|1|1|0.75|1|5|471|128 |
| chr2_1 | exon | 43023126 | 43023235 | 43023126 | ID=Msa0208320-mRNA-1:exon:12805;Parent=Msa0208320-mRNA-1 |
| chr2_1 | exon | 43023331 | 43023451 | 43023331 | ID=Msa0208320-mRNA-1:exon:12806;Parent=Msa0208320-mRNA-1 |
| chr2_1 | exon | 43023611 | 43023714 | 43023611 | ID=Msa0208320-mRNA-1:exon:12807;Parent=Msa0208320-mRNA-1 |
| chr2_1 | exon | 43026681 | 43026812 | 43026681 | ID=Msa0208320-mRNA-1:exon:12808;Parent=Msa0208320-mRNA-1 |
| chr2_1 | exon | 43026906 | 43027403 | 43026906 | ID=Msa0208320-mRNA-1:exon:12809;Parent=Msa0208320-mRNA-1 |
| chr2_1 | five_prime_UTR | 43023126 | 43023232 | 43023126 | ID=Msa0208320-mRNA-1:five_prime_utr;Parent=Msa0208320-mRNA-1 |
| chr2_1 | CDS | 43023233 | 43023235 | 43023233 | ID=Msa0208320-mRNA-1:cds;Parent=Msa0208320-mRNA-1 |
| chr2_1 | CDS | 43023331 | 43023451 | 43023331 | ID=Msa0208320-mRNA-1:cds;Parent=Msa0208320-mRNA-1 |
| chr2_1 | CDS | 43023611 | 43023714 | 43023611 | ID=Msa0208320-mRNA-1:cds;Parent=Msa0208320-mRNA-1 |
| chr2_1 | CDS | 43026681 | 43026812 | 43026681 | ID=Msa0208320-mRNA-1:cds;Parent=Msa0208320-mRNA-1 |
| chr2_1 | CDS | 43026906 | 43026932 | 43026906 | ID=Msa0208320-mRNA-1:cds;Parent=Msa0208320-mRNA-1 |
| chr2_1 | three_prime_UTR | 43026933 | 43027403 | 43026933 | ID=Msa0208320-mRNA-1:three_prime_utr;Parent=Msa0208320-mRNA-1 |
| Gene Sequence |
| Protein sequence |
