AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1441220


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1441220 MtrunA17_Chr7g0275511 95.031 483 20 3 1 479 1 483 0.0 929
Msa1441220 MtrunA17_Chr8g0347281 61.822 461 171 3 12 471 16 472 0.0 585
Msa1441220 MtrunA17_Chr8g0347271 60.042 473 183 4 1 471 5 473 0.0 580
Msa1441220 MtrunA17_Chr8g0336691 52.814 462 215 2 15 473 920 1381 1.44e-168 511
Msa1441220 MtrunA17_Chr8g0336691 51.271 472 227 2 9 477 8 479 1.99e-157 481
Msa1441220 MtrunA17_Chr8g0336691 49.142 466 206 3 15 477 481 918 7.84e-151 464
Msa1441220 MtrunA17_Chr8g0336741 50.433 462 224 4 15 473 14 473 8.76e-167 479
Msa1441220 MtrunA17_Chr1g0153451 49.356 466 234 2 9 473 1 465 4.54e-165 474
Msa1441220 MtrunA17_Chr7g0232391 48.832 471 231 5 9 473 1 467 2.89e-163 469
Msa1441220 MtrunA17_Chr8g0336651 51.709 468 221 3 11 473 778 1245 5.28e-163 493
Msa1441220 MtrunA17_Chr8g0336651 51.282 468 223 4 9 473 1 466 1.71e-156 476
Msa1441220 MtrunA17_Chr8g0336651 51.957 281 101 2 199 477 532 780 8.32e-85 284
Msa1441220 MtrunA17_Chr8g0336731 50.976 461 221 4 16 473 34 492 7.11e-163 470
Msa1441220 MtrunA17_Chr7g0232411 47.122 469 238 5 9 471 1 465 2.23e-157 455
Msa1441220 MtrunA17_Chr7g0232341 44.915 472 249 5 9 473 1 468 2.55e-149 434
Msa1441220 MtrunA17_Chr7g0232401 45.798 476 246 5 9 476 1 472 3.53e-146 426
Msa1441220 MtrunA17_Chr7g0232331 45.396 467 244 5 9 468 1 463 1.80e-145 424
Msa1441220 MtrunA17_Chr6g0459311 47.222 468 238 8 9 471 8 471 7.20e-143 418
Msa1441220 MtrunA17_Chr6g0449931 47.174 460 239 4 15 470 7 466 1.66e-141 414
Msa1441220 MtrunA17_Chr6g0486251 46.753 462 237 8 15 471 7 464 1.34e-140 412
Msa1441220 MtrunA17_Chr6g0486201 46.753 462 237 8 15 471 7 464 1.34e-140 412
Msa1441220 MtrunA17_Chr7g0232311 48.291 468 234 6 9 472 1 464 1.66e-136 401
Msa1441220 MtrunA17_Chr8g0373301 44.111 467 249 7 15 475 10 470 2.68e-135 398
Msa1441220 MtrunA17_Chr8g0361371 45.073 477 244 10 15 479 8 478 7.49e-135 397
Msa1441220 MtrunA17_Chr8g0335141 45.455 473 244 10 9 473 4 470 1.65e-133 394
Msa1441220 MtrunA17_Chr8g0334851 42.616 474 252 9 15 475 7 473 9.86e-132 389
Msa1441220 MtrunA17_Chr8g0335161 45.684 475 241 11 9 473 1 468 4.82e-131 387
Msa1441220 MtrunA17_Chr8g0339631 44.632 475 252 7 9 475 1 472 1.37e-129 384
Msa1441220 MtrunA17_Chr8g0334831 43.381 491 253 10 9 479 1 486 3.11e-127 378
Msa1441220 MtrunA17_Chr8g0334861 42.038 471 259 10 9 472 1 464 4.05e-126 375
Msa1441220 MtrunA17_Chr8g0339451 44.255 470 248 8 17 475 1 467 2.23e-125 373
Msa1441220 MtrunA17_Chr8g0339441 42.437 476 222 9 9 475 1 433 1.56e-116 349
Msa1441220 MtrunA17_Chr8g0339461 42.017 476 262 8 9 473 1 473 2.34e-116 350
Msa1441220 MtrunA17_Chr7g0232351 46.719 381 198 4 9 386 1 379 2.47e-115 344
Msa1441220 MtrunA17_Chr8g0370941 40.779 488 256 14 9 468 3 485 1.33e-111 339
Msa1441220 MtrunA17_Chr5g0403641 37.844 473 240 11 16 468 61 499 5.18e-95 296
Msa1441220 MtrunA17_Chr6g0462541 36.232 483 270 10 15 477 5 469 6.83e-91 285
Msa1441220 MtrunA17_Chr6g0462551 36.157 484 268 12 15 476 5 469 1.67e-90 284
Msa1441220 MtrunA17_Chr6g0462531 37.500 480 257 13 15 471 5 464 2.04e-90 283
Msa1441220 MtrunA17_Chr8g0339601 45.294 340 168 6 148 475 1 334 7.66e-90 277
Msa1441220 MtrunA17_Chr6g0462521 36.441 472 265 11 15 474 5 453 5.16e-89 279
Msa1441220 MtrunA17_Chr6g0462571 36.059 477 275 11 15 476 5 466 7.35e-89 280
Msa1441220 MtrunA17_Chr3g0079731 34.025 482 299 8 9 472 1 481 1.29e-88 279
Msa1441220 MtrunA17_Chr1g0153461 58.879 214 87 1 260 473 2 214 1.29e-88 270
Msa1441220 MtrunA17_Chr2g0302991 35.865 474 262 17 15 467 6 458 6.35e-75 243
Msa1441220 MtrunA17_Chr5g0448521 34.746 472 275 15 15 467 6 463 7.23e-73 238
Msa1441220 MtrunA17_Chr2g0302961 35.802 486 249 20 15 467 6 461 4.89e-72 235
Msa1441220 MtrunA17_Chr5g0442541 34.728 478 273 17 11 467 2 461 1.43e-70 231
Msa1441220 MtrunA17_Chr5g0442491 34.016 488 272 17 11 467 2 470 1.50e-67 224
Msa1441220 MtrunA17_Chr5g0442521 33.542 480 286 16 11 467 2 471 9.41e-67 222
Msa1441220 MtrunA17_Chr5g0442581 34.151 489 272 20 11 467 2 472 2.33e-66 222
Msa1441220 MtrunA17_Chr5g0442601 34.021 485 278 16 11 467 401 871 3.08e-65 226
Msa1441220 MtrunA17_Chr5g0442601 37.662 308 162 11 106 408 51 333 8.52e-44 165
Msa1441220 MtrunA17_Chr5g0442561 34.375 480 279 17 11 467 2 468 3.24e-65 218
Msa1441220 MtrunA17_Chr5g0429711 33.820 479 270 18 9 467 6 457 1.30e-61 208
Msa1441220 MtrunA17_Chr5g0429681 31.612 484 286 15 9 469 39 500 5.35e-60 204
Msa1441220 MtrunA17_Chr5g0442511 32.106 489 275 18 1 467 36 489 9.19e-59 201
Msa1441220 MtrunA17_Chr5g0426431 32.179 491 265 16 15 467 13 473 5.49e-58 199
Msa1441220 MtrunA17_Chr3g0092641 31.440 493 270 15 13 467 11 473 1.66e-57 197
Msa1441220 MtrunA17_Chr6g0449991 36.036 333 191 5 15 343 7 321 2.26e-57 192
Msa1441220 MtrunA17_Chr5g0419761 32.200 500 262 22 16 467 11 481 8.38e-57 196
Msa1441220 MtrunA17_Chr8g0366391 31.515 495 276 17 10 467 5 473 2.60e-56 194
Msa1441220 MtrunA17_Chr7g0243931 32.860 493 267 21 15 467 18 486 9.60e-56 193
Msa1441220 MtrunA17_Chr4g0050341 31.558 507 279 18 4 470 11 489 1.21e-55 193
Msa1441220 MtrunA17_Chr4g0053501 28.163 490 284 13 15 470 12 467 1.58e-55 192
Msa1441220 MtrunA17_Chr4g0053321 29.350 477 304 12 11 470 22 482 1.73e-55 192
Msa1441220 MtrunA17_Chr7g0243801 31.481 486 279 17 15 467 8 472 4.11e-55 191
Msa1441220 MtrunA17_Chr3g0112771 30.189 477 291 15 3 467 1 447 3.99e-54 188
Msa1441220 MtrunA17_Chr7g0243771 30.864 486 282 17 15 467 7 471 6.13e-54 188
Msa1441220 MtrunA17_Chr8g0337381 64.567 127 43 1 345 471 1 125 2.84e-53 175
Msa1441220 MtrunA17_Chr7g0243871 31.237 493 275 15 7 464 2 465 1.47e-52 184
Msa1441220 MtrunA17_Chr7g0243951 30.909 495 273 20 15 467 12 479 3.88e-52 183
Msa1441220 MtrunA17_Chr4g0044511 29.719 498 267 16 15 467 41 500 4.83e-52 183
Msa1441220 MtrunA17_Chr7g0265051 30.894 492 274 17 16 465 11 478 7.83e-52 183
Msa1441220 MtrunA17_Chr5g0414331 31.263 483 255 16 15 467 14 449 3.79e-51 180
Msa1441220 MtrunA17_Chr5g0420801 28.814 472 294 14 15 468 8 455 5.44e-51 180
Msa1441220 MtrunA17_Chr8g0361411 30.372 484 277 20 9 467 1 449 2.11e-50 178
Msa1441220 MtrunA17_Chr5g0414321 31.667 480 251 16 15 464 12 444 2.26e-50 178
Msa1441220 MtrunA17_Chr6g0464881 30.247 486 273 17 5 464 2 447 2.75e-50 177
Msa1441220 MtrunA17_Chr7g0243861 31.440 493 274 21 15 467 15 483 4.23e-50 178
Msa1441220 MtrunA17_Chr7g0265101 29.800 500 287 19 9 465 2 480 1.41e-49 177
Msa1441220 MtrunA17_Chr8g0380531 31.106 479 274 14 15 470 11 456 1.99e-49 175
Msa1441220 MtrunA17_Chr7g0235051 30.316 475 266 15 15 464 12 446 5.22e-49 174
Msa1441220 MtrunA17_Chr1g0173121 29.522 481 262 18 14 460 14 451 1.17e-48 173
Msa1441220 MtrunA17_Chr6g0464921 28.216 482 273 13 13 464 10 448 1.44e-48 173
Msa1441220 MtrunA17_Chr8g0382021 30.435 460 281 13 19 460 39 477 2.28e-48 173
Msa1441220 MtrunA17_Chr6g0464841 29.461 482 262 15 15 464 12 447 2.38e-48 172
Msa1441220 MtrunA17_Chr6g0464861 29.577 497 261 16 5 464 2 446 2.54e-48 172
Msa1441220 MtrunA17_Chr1g0159551 28.390 472 266 15 19 460 19 448 3.04e-48 172
Msa1441220 MtrunA17_Chr6g0454301 28.514 498 286 17 10 467 259 726 3.46e-48 176
Msa1441220 MtrunA17_Chr6g0454301 33.761 234 125 6 239 460 3 218 2.00e-34 137
Msa1441220 MtrunA17_Chr3g0079711 46.277 188 99 2 288 473 3 190 3.82e-48 164
Msa1441220 MtrunA17_Chr6g0454341 28.049 492 282 18 10 460 6 466 4.46e-48 172
Msa1441220 MtrunA17_Chr7g0243681 29.615 493 278 17 15 467 12 475 4.72e-48 172
Msa1441220 MtrunA17_Chr7g0243781 30.550 491 274 17 15 467 10 471 6.13e-48 172
Msa1441220 MtrunA17_Chr6g0464871 30.290 482 258 16 15 464 24 459 1.25e-47 171
Msa1441220 MtrunA17_Chr7g0265141 28.195 493 283 17 16 463 11 477 1.54e-47 171
Msa1441220 MtrunA17_Chr3g0078841 28.425 489 278 17 13 460 9 466 1.70e-47 171
Msa1441220 MtrunA17_Chr8g0359821 28.862 492 281 17 11 462 7 469 4.91e-47 169
Msa1441220 MtrunA17_Chr4g0014061 27.921 505 276 17 10 467 5 468 7.54e-47 169
Msa1441220 MtrunA17_Chr7g0275681 29.283 502 272 17 13 467 11 476 8.11e-47 169
Msa1441220 MtrunA17_Chr7g0249981 27.859 481 269 14 15 464 26 459 9.66e-47 169
Msa1441220 MtrunA17_Chr4g0042891 30.228 483 290 18 15 473 8 467 1.37e-46 168
Msa1441220 MtrunA17_Chr5g0440421 30.059 509 272 19 7 460 3 482 1.65e-46 168
Msa1441220 MtrunA17_Chr4g0044521 30.181 497 259 19 15 467 10 462 2.13e-46 167
Msa1441220 MtrunA17_Chr3g0118691 27.789 511 275 17 9 467 10 478 2.25e-46 167
Msa1441220 MtrunA17_Chr7g0218791 27.447 470 298 11 13 468 4 444 4.69e-46 166
Msa1441220 MtrunA17_Chr6g0454321 27.234 470 288 12 16 453 12 459 5.44e-46 169
Msa1441220 MtrunA17_Chr4g0044501 29.209 493 291 18 8 467 4 471 5.81e-46 166
Msa1441220 MtrunA17_Chr8g0369341 27.564 468 313 10 15 467 8 464 6.26e-46 166
Msa1441220 MtrunA17_Chr6g0453951 28.455 492 282 18 10 460 53 515 8.58e-46 167
Msa1441220 MtrunA17_Chr8g0336331 28.008 482 284 16 15 460 11 465 2.36e-45 165
Msa1441220 MtrunA17_Chr7g0243631 29.615 493 283 20 15 467 14 482 2.84e-45 165
Msa1441220 MtrunA17_Chr2g0278711 28.283 495 291 16 10 468 7 473 2.89e-45 164
Msa1441220 MtrunA17_Chr2g0329111 29.903 515 287 21 9 477 1 487 3.08e-45 164
Msa1441220 MtrunA17_Chr4g0042931 29.832 476 299 15 15 473 8 465 3.29e-45 164
Msa1441220 MtrunA17_Chr5g0426401 37.226 274 139 8 207 467 53 306 7.00e-45 159
Msa1441220 MtrunA17_Chr6g0454151 30.518 367 211 9 116 460 122 466 8.46e-45 163
Msa1441220 MtrunA17_Chr7g0265151 28.106 491 292 13 16 467 11 479 9.75e-45 163
Msa1441220 MtrunA17_Chr1g0179901 28.039 510 287 20 3 460 1 482 1.12e-44 163
Msa1441220 MtrunA17_Chr4g0060511 29.779 497 280 19 15 467 12 483 1.51e-44 163
Msa1441220 MtrunA17_Chr7g0218811 26.273 491 276 16 13 472 14 449 1.62e-44 162
Msa1441220 MtrunA17_Chr7g0243851 29.713 488 247 18 15 467 12 438 1.78e-44 162
Msa1441220 MtrunA17_Chr4g0032331 30.425 447 269 17 15 447 9 427 1.80e-44 162
Msa1441220 MtrunA17_Chr5g0431441 28.870 478 274 15 15 464 19 458 2.75e-44 162
Msa1441220 MtrunA17_Chr6g0454401 27.778 504 271 19 10 460 6 469 3.01e-44 162
Msa1441220 MtrunA17_Chr4g0066151 28.024 496 289 18 6 465 10 473 4.20e-44 161
Msa1441220 MtrunA17_Chr7g0265041 28.226 496 294 17 13 467 10 484 6.85e-44 161
Msa1441220 MtrunA17_Chr5g0419771 28.226 496 275 16 15 460 37 501 7.21e-44 161
Msa1441220 MtrunA17_Chr4g0011051 26.772 508 275 16 16 464 11 480 7.23e-44 161
Msa1441220 MtrunA17_Chr7g0218831 26.427 473 299 14 13 473 5 440 7.67e-44 160
Msa1441220 MtrunA17_Chr7g0217881 30.328 366 197 11 116 460 122 450 1.24e-43 160
Msa1441220 MtrunA17_Chr3g0118711 28.827 503 276 18 11 467 10 476 1.30e-43 160
Msa1441220 MtrunA17_Chr6g0454331 28.487 509 256 22 13 460 6 467 1.90e-43 159
Msa1441220 MtrunA17_Chr6g0454191 27.033 492 290 15 10 460 6 469 2.11e-43 159
Msa1441220 MtrunA17_Chr3g0118701 28.024 496 293 16 9 467 10 478 2.15e-43 159
Msa1441220 MtrunA17_Chr7g0243761 30.396 454 261 15 5 428 2 430 2.80e-43 159
Msa1441220 MtrunA17_Chr5g0412111 30.303 495 264 22 13 467 4 457 4.49e-43 158
Msa1441220 MtrunA17_Chr6g0454291 28.745 494 272 21 13 460 6 465 7.02e-43 158
Msa1441220 MtrunA17_Chr5g0401721 28.776 490 274 21 15 464 9 463 1.13e-42 157
Msa1441220 MtrunA17_Chr2g0307961 28.719 484 285 18 13 467 12 464 1.25e-42 157
Msa1441220 MtrunA17_Chr3g0118671 29.555 494 276 18 15 467 7 469 1.38e-42 157
Msa1441220 MtrunA17_Chr6g0463891 27.572 486 287 15 15 460 13 473 1.41e-42 157
Msa1441220 MtrunA17_Chr8g0355221 27.711 498 284 17 15 467 16 482 1.54e-42 157
Msa1441220 MtrunA17_Chr3g0118771 29.091 495 287 15 10 467 17 484 4.41e-42 156
Msa1441220 MtrunA17_Chr6g0454201 33.110 299 161 9 180 460 192 469 8.73e-42 155
Msa1441220 MtrunA17_Chr7g0218841 25.949 474 309 14 9 473 1 441 1.26e-41 154
Msa1441220 MtrunA17_Chr7g0249931 27.593 482 273 16 10 460 36 472 1.27e-41 154
Msa1441220 MtrunA17_Chr6g0454211 27.254 488 291 15 11 460 294 755 1.39e-41 158
Msa1441220 MtrunA17_Chr6g0454211 26.087 276 137 8 131 385 7 236 2.01e-14 75.9
Msa1441220 MtrunA17_Chr7g0218821 26.087 483 298 14 13 472 4 450 1.59e-41 154
Msa1441220 MtrunA17_Chr3g0112761 27.917 480 290 17 10 469 4 447 1.60e-41 154
Msa1441220 MtrunA17_Chr5g0416741 26.854 499 310 16 3 467 2 479 1.68e-41 154
Msa1441220 MtrunA17_Chr7g0243711 38.596 228 115 5 252 467 98 312 2.79e-41 150
Msa1441220 MtrunA17_Chr6g0452771 28.941 387 225 10 103 460 103 468 3.28e-41 153
Msa1441220 MtrunA17_Chr4g0066131 27.000 500 295 20 3 465 2 468 3.31e-41 153
Msa1441220 MtrunA17_Chr6g0482061 27.601 471 300 16 15 459 12 467 3.56e-41 153
Msa1441220 MtrunA17_Chr4g0066261 28.119 505 286 20 9 469 6 477 7.92e-41 152
Msa1441220 MtrunA17_Chr4g0066221 26.000 500 300 17 9 467 6 476 8.45e-41 152
Msa1441220 MtrunA17_Chr6g0454141 27.586 493 283 17 11 460 7 468 2.78e-40 151
Msa1441220 MtrunA17_Chr5g0412101 27.767 497 298 18 1 467 1 466 3.33e-40 150
Msa1441220 MtrunA17_Chr4g0066201 27.811 507 269 18 9 467 13 470 4.20e-40 150
Msa1441220 MtrunA17_Chr6g0454221 34.468 235 123 6 239 460 3 219 4.42e-40 146
Msa1441220 MtrunA17_Chr4g0066171 25.761 493 296 14 9 467 16 472 7.20e-40 150
Msa1441220 MtrunA17_Chr7g0249961 35.983 239 121 5 239 464 33 252 9.86e-40 144
Msa1441220 MtrunA17_Chr4g0044481 29.257 417 225 13 15 408 28 397 1.08e-39 148
Msa1441220 MtrunA17_Chr8g0367221 29.103 457 277 13 15 448 1289 1721 1.27e-39 153
Msa1441220 MtrunA17_Chr8g0367221 28.850 461 273 17 15 448 799 1231 6.76e-37 145
Msa1441220 MtrunA17_Chr8g0367221 28.033 478 294 16 15 468 13 464 2.04e-36 144
Msa1441220 MtrunA17_Chr3g0118721 36.330 267 136 8 215 467 39 285 1.41e-39 144
Msa1441220 MtrunA17_Chr6g0454131 28.533 375 224 10 116 467 121 474 1.66e-39 149
Msa1441220 MtrunA17_Chr6g0463861 31.541 279 161 7 211 467 199 469 2.19e-39 148
Msa1441220 MtrunA17_Chr6g0454121 30.133 375 218 11 116 467 121 474 2.53e-39 148
Msa1441220 MtrunA17_Chr1g0207951 31.183 372 199 12 116 464 764 1101 3.22e-39 152
Msa1441220 MtrunA17_Chr1g0207951 37.143 210 105 4 258 464 378 563 6.87e-37 145
Msa1441220 MtrunA17_Chr5g0412131 27.515 487 289 17 13 467 11 465 3.25e-39 148
Msa1441220 MtrunA17_Chr6g0454261 27.824 478 275 18 11 447 7 455 4.40e-39 147
Msa1441220 MtrunA17_Chr6g0454361 28.250 400 235 11 102 467 95 476 5.62e-39 147
Msa1441220 MtrunA17_Chr6g0454351 27.054 499 277 19 10 467 8 460 6.57e-39 147
Msa1441220 MtrunA17_Chr5g0401851 28.231 503 294 20 7 467 2 479 8.69e-39 147
Msa1441220 MtrunA17_Chr1g0207971 37.131 237 111 6 243 464 233 446 1.21e-38 146
Msa1441220 MtrunA17_Chr6g0454181 26.477 491 291 17 11 460 7 468 1.25e-38 146
Msa1441220 MtrunA17_Chr5g0428081 26.786 504 284 17 9 464 6 472 1.91e-38 146
Msa1441220 MtrunA17_Chr5g0431361 26.866 469 289 12 15 464 13 446 2.94e-38 145
Msa1441220 MtrunA17_Chr1g0207981 30.337 356 200 14 130 464 137 465 4.42e-38 145
Msa1441220 MtrunA17_Chr7g0250001 26.186 485 280 13 15 468 7 444 2.18e-37 142
Msa1441220 MtrunA17_Chr8g0374931 26.139 505 286 14 9 463 6 473 2.90e-37 142
Msa1441220 MtrunA17_Chr3g0106231 27.345 501 270 19 1 464 1 444 4.59e-37 142
Msa1441220 MtrunA17_Chr4g0029131 29.571 443 268 17 15 440 13 428 4.95e-37 144
Msa1441220 MtrunA17_Chr6g0463851 25.050 503 305 14 9 468 6 479 5.67e-37 142
Msa1441220 MtrunA17_Chr8g0374941 32.500 280 159 8 210 467 1142 1413 6.11e-37 145
Msa1441220 MtrunA17_Chr8g0374941 30.483 269 157 7 210 456 204 464 2.36e-33 134
Msa1441220 MtrunA17_Chr8g0374941 32.707 266 149 8 210 453 669 926 6.86e-32 130
Msa1441220 MtrunA17_Chr3g0098111 26.839 503 297 19 12 477 7 475 8.42e-37 141
Msa1441220 MtrunA17_Chr7g0243911 37.788 217 110 5 250 454 10 213 8.75e-37 135
Msa1441220 MtrunA17_Chr5g0431421 26.170 470 288 14 15 464 11 441 1.15e-36 140
Msa1441220 MtrunA17_Chr5g0431371 27.311 476 275 16 15 464 11 441 1.31e-36 140
Msa1441220 MtrunA17_Chr5g0431401 26.004 473 291 14 15 467 11 444 1.31e-36 140
Msa1441220 MtrunA17_Chr6g0454171 32.986 288 143 9 186 460 48 298 1.38e-36 137
Msa1441220 MtrunA17_Chr6g0454271 35.961 203 112 4 258 460 91 275 1.40e-36 136
Msa1441220 MtrunA17_Chr1g0165701 26.305 498 288 15 15 467 16 479 2.95e-36 140
Msa1441220 MtrunA17_Chr3g0118661 27.545 501 286 17 10 467 9 475 4.26e-36 139
Msa1441220 MtrunA17_Chr2g0294921 26.908 498 293 18 9 464 155 623 5.07e-36 141
Msa1441220 MtrunA17_Chr3g0121991 26.860 484 293 15 16 464 81 538 6.77e-36 140
Msa1441220 MtrunA17_Chr4g0072761 29.659 381 227 11 100 467 96 448 1.14e-35 137
Msa1441220 MtrunA17_Chr8g0336321 30.022 463 261 17 15 445 8 439 1.38e-35 137
Msa1441220 MtrunA17_Chr6g0453961 26.735 490 297 17 9 460 13 478 1.52e-35 138
Msa1441220 MtrunA17_Chr4g0066281 25.355 493 293 16 11 467 9 462 1.52e-35 137
Msa1441220 MtrunA17_Chr7g0265111 26.810 511 299 20 16 478 41 524 2.84e-35 138
Msa1441220 MtrunA17_Chr7g0243611 39.524 210 96 7 214 408 78 271 4.59e-35 132
Msa1441220 MtrunA17_Chr8g0374901 31.408 277 160 8 210 464 203 471 5.79e-35 136
Msa1441220 MtrunA17_Chr1g0207931 37.975 237 117 8 243 464 269 490 7.11e-35 136
Msa1441220 MtrunA17_Chr5g0423981 30.566 265 151 7 208 460 190 433 8.59e-35 135
Msa1441220 MtrunA17_Chr5g0410941 26.157 497 300 18 9 467 18 485 8.91e-35 135
Msa1441220 MtrunA17_Chr1g0207861 27.530 494 299 19 15 477 9 474 1.11e-34 135
Msa1441220 MtrunA17_Chr5g0448551 27.964 447 272 14 11 439 4 418 1.30e-34 135
Msa1441220 MtrunA17_Chr3g0122001 34.211 266 148 7 218 467 694 948 1.43e-34 137
Msa1441220 MtrunA17_Chr3g0122001 34.082 267 148 8 218 467 214 469 3.44e-32 130
Msa1441220 MtrunA17_Chr6g0466831 28.298 470 292 15 15 467 19 460 1.65e-34 134
Msa1441220 MtrunA17_Chr8g0377921 26.680 506 273 18 12 467 2 459 1.73e-34 134
Msa1441220 MtrunA17_Chr8g0336251 29.806 463 262 17 15 445 8 439 1.76e-34 134
Msa1441220 MtrunA17_Chr3g0106251 34.507 284 146 9 190 460 26 282 1.86e-34 131
Msa1441220 MtrunA17_Chr8g0374971 31.183 279 162 8 211 467 206 476 1.98e-34 135
Msa1441220 MtrunA17_Chr2g0294931 32.364 275 157 8 211 464 208 474 2.14e-34 135
Msa1441220 MtrunA17_Chr2g0278721 29.209 493 282 16 10 467 513 973 2.21e-34 137
Msa1441220 MtrunA17_Chr2g0278721 28.384 458 288 12 6 446 7 441 6.25e-32 130
Msa1441220 MtrunA17_Chr8g0334841 47.260 146 75 2 176 320 1 145 2.53e-34 126
Msa1441220 MtrunA17_Chr7g0243811 39.450 218 106 8 196 406 175 373 3.62e-34 132
Msa1441220 MtrunA17_Chr8g0365811 27.066 484 310 15 5 464 486 950 4.20e-34 136
Msa1441220 MtrunA17_Chr8g0365811 27.669 459 279 16 10 438 4 439 3.38e-33 134
Msa1441220 MtrunA17_Chr2g0294941 30.566 265 155 7 211 454 106 362 6.63e-34 131
Msa1441220 MtrunA17_Chr7g0218311 32.130 277 160 7 211 467 211 479 6.72e-34 133
Msa1441220 MtrunA17_Chr5g0416821 26.190 504 300 19 1 467 1 469 6.84e-34 133
Msa1441220 MtrunA17_Chr8g0355011 29.275 345 178 10 116 447 46 337 8.18e-34 130
Msa1441220 MtrunA17_Chr1g0161351 27.651 481 295 17 15 467 38 493 1.29e-33 132
Msa1441220 MtrunA17_Chr8g0350881 31.047 277 161 8 210 464 205 473 3.65e-33 131
Msa1441220 MtrunA17_Chr4g0069611 28.511 470 257 17 11 446 12 436 6.12e-33 130
Msa1441220 MtrunA17_Chr8g0377941 34.252 254 131 7 215 458 221 448 7.49e-33 130
Msa1441220 MtrunA17_Chr5g0427571 40.000 190 101 3 256 445 97 273 9.04e-33 126
Msa1441220 MtrunA17_Chr5g0393591 35.349 215 104 5 256 467 249 431 1.10e-32 129
Msa1441220 MtrunA17_Chr6g0466841 27.872 470 294 15 15 467 19 460 1.11e-32 129
Msa1441220 MtrunA17_Chr5g0432731 30.903 288 165 8 184 460 21 285 1.18e-32 126
Msa1441220 MtrunA17_Chr4g0029151 28.345 441 276 14 15 440 21 436 2.16e-32 129
Msa1441220 MtrunA17_Chr5g0442501 32.476 311 184 10 15 310 6 305 3.77e-32 125
Msa1441220 MtrunA17_Chr5g0409591 37.017 181 112 1 260 438 273 453 4.81e-32 128
Msa1441220 MtrunA17_Chr6g0454251 27.143 420 234 17 11 386 4 395 8.39e-32 125
Msa1441220 MtrunA17_Chr1g0207831 23.866 507 306 13 12 479 6 471 1.83e-31 126
Msa1441220 MtrunA17_Chr4g0072771 26.695 472 291 15 15 467 26 461 2.19e-31 125
Msa1441220 MtrunA17_Chr3g0118751 26.547 501 265 17 9 467 1 440 2.14e-30 122
Msa1441220 MtrunA17_Chr7g0241781 31.136 273 155 10 201 468 178 422 3.05e-30 122
Msa1441220 MtrunA17_Chr2g0278741 27.802 464 283 13 6 446 89 523 3.26e-30 123
Msa1441220 MtrunA17_Chr3g0079721 28.920 287 181 8 15 282 6 288 4.71e-30 118
Msa1441220 MtrunA17_Chr3g0092031 34.783 184 103 3 264 446 6 173 9.38e-29 112
Msa1441220 MtrunA17_Chr6g0454371 33.898 177 99 4 284 460 1 159 2.15e-28 110
Msa1441220 MtrunA17_Chr1g0196851 28.097 452 266 17 15 440 50 468 7.47e-28 116
Msa1441220 MtrunA17_Chr4g0040711 26.195 481 304 17 10 470 4 453 1.62e-27 114
Msa1441220 MtrunA17_Chr7g0241801 30.420 286 164 11 189 468 166 422 5.12e-27 112
Msa1441220 MtrunA17_Chr4g0040691 27.669 459 285 17 10 448 4 435 6.89e-27 112
Msa1441220 MtrunA17_Chr5g0431431 30.909 275 148 8 176 441 116 357 1.02e-26 110
Msa1441220 MtrunA17_Chr4g0039881 27.494 451 264 17 23 447 1 414 1.33e-26 112
Msa1441220 MtrunA17_Chr2g0283041 37.363 182 99 4 262 440 256 425 3.52e-26 110
Msa1441220 MtrunA17_Chr8g0336261 35.484 155 82 4 284 438 1 137 8.75e-26 102
Msa1441220 MtrunA17_Chr7g0231631 29.710 276 153 8 209 467 4 255 1.14e-25 105
Msa1441220 MtrunA17_Chr2g0302851 27.061 473 262 15 10 446 12 437 2.02e-25 108
Msa1441220 MtrunA17_Chr6g0464091 27.140 479 261 18 10 446 14 446 5.77e-25 107
Msa1441220 MtrunA17_Chr6g0454231 27.969 261 123 6 210 461 3 207 2.47e-24 105
Msa1441220 MtrunA17_Chr8g0357361 31.527 203 115 5 214 408 63 249 4.33e-24 101
Msa1441220 MtrunA17_Chr2g0319761 27.632 456 288 18 10 447 3 434 1.59e-23 103
Msa1441220 MtrunA17_Chr4g0029161 26.862 443 252 18 15 440 13 400 2.03e-23 102
Msa1441220 MtrunA17_Chr4g0066141 35.032 157 90 4 323 467 191 347 1.26e-21 96.3
Msa1441220 MtrunA17_Chr5g0442551 32.046 259 144 10 106 355 59 294 1.46e-21 94.7
Msa1441220 MtrunA17_Chr6g0449971 54.430 79 36 0 395 473 1 79 3.57e-21 87.8
Msa1441220 MtrunA17_Chr2g0319791 33.480 227 133 7 226 448 223 435 8.02e-21 94.7
Msa1441220 MtrunA17_Chr2g0319731 33.921 227 132 7 226 448 240 452 9.07e-21 94.7
Msa1441220 MtrunA17_Chr2g0319751 35.751 193 104 5 262 448 734 912 1.48e-20 95.5
Msa1441220 MtrunA17_Chr2g0319751 31.414 191 91 5 262 448 257 411 1.05e-18 89.7
Msa1441220 MtrunA17_Chr2g0319801 25.612 449 297 14 15 448 9 435 2.00e-19 90.9
Msa1441220 MtrunA17_Chr6g0469961 37.870 169 89 5 146 304 2 164 2.21e-19 85.1
Msa1441220 MtrunA17_Chr1g0207881 38.583 127 69 4 339 460 251 373 6.19e-18 85.5
Msa1441220 MtrunA17_Chr7g0243731 43.836 73 41 0 343 415 6 78 1.04e-17 77.8
Msa1441220 MtrunA17_Chr2g0321331 32.418 182 91 5 269 447 91 243 1.10e-17 83.2
Msa1441220 MtrunA17_Chr7g0250021 24.551 334 188 11 10 309 8 311 5.86e-14 72.8
Msa1441220 MtrunA17_Chr6g0453981 25.481 208 113 6 132 308 8 204 4.47e-11 62.8
Msa1441220 MtrunA17_Chr6g0454391 48.889 45 23 0 363 407 14 58 6.05e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1441220 AT4G01070.1 62.099 467 169 5 10 471 4 467 0.0 590
Msa1441220 AT1G01420.2 57.234 470 196 4 13 479 10 477 0.0 547
Msa1441220 AT1G01420.1 57.234 470 196 4 13 479 7 474 0.0 547
Msa1441220 AT1G01390.2 54.894 470 208 3 13 479 24 492 0.0 524
Msa1441220 AT1G01390.1 54.894 470 208 3 13 479 7 475 0.0 523
Msa1441220 AT4G01070.2 60.057 348 129 6 10 352 4 346 4.45e-141 409
Msa1441220 AT3G50740.1 41.277 470 257 10 13 468 6 470 1.51e-111 338
Msa1441220 AT5G66690.1 39.565 460 265 7 13 465 6 459 1.31e-108 331
Msa1441220 AT5G26310.1 38.043 460 272 7 13 465 6 459 1.53e-105 323
Msa1441220 AT2G18570.1 36.326 479 279 12 13 478 4 469 2.74e-100 309
Msa1441220 AT4G36770.1 40.708 452 242 15 17 454 7 446 4.56e-96 298
Msa1441220 AT3G16520.3 36.809 470 274 10 15 474 6 462 3.60e-89 280
Msa1441220 AT2G18560.1 39.946 373 202 8 117 479 20 380 3.34e-88 275
Msa1441220 AT3G16520.1 36.463 458 268 10 15 462 6 450 2.37e-85 270
Msa1441220 AT3G16520.2 36.865 453 263 10 15 457 6 445 4.91e-85 269
Msa1441220 AT1G07250.1 34.591 477 261 17 15 461 7 462 8.42e-77 248
Msa1441220 AT2G29710.1 32.415 472 267 18 15 460 6 451 1.89e-69 229
Msa1441220 AT2G29740.1 32.340 470 279 12 15 460 9 463 2.96e-68 226
Msa1441220 AT1G07240.1 32.449 490 278 16 11 467 2 471 3.02e-68 226
Msa1441220 AT2G29750.1 33.403 476 265 18 15 460 9 462 5.41e-68 226
Msa1441220 AT2G29730.1 30.228 483 277 18 15 467 6 458 1.94e-65 218
Msa1441220 AT4G15280.1 34.711 484 252 19 15 460 5 462 1.36e-64 216
Msa1441220 AT4G15280.2 34.711 484 252 19 15 460 37 494 2.81e-64 216
Msa1441220 AT3G21800.1 32.716 486 268 16 15 464 6 468 1.38e-63 214
Msa1441220 AT1G07260.1 32.773 476 268 18 14 460 8 460 2.38e-63 213
Msa1441220 AT3G21790.1 31.911 492 274 17 15 467 5 474 1.99e-60 206
Msa1441220 AT3G21760.1 31.762 488 284 15 15 469 5 476 5.03e-60 204
Msa1441220 AT1G22400.1 31.325 498 244 18 10 453 9 462 2.50e-59 203
Msa1441220 AT3G21750.1 31.315 479 285 16 15 470 5 462 2.89e-59 202
Msa1441220 AT1G78270.1 31.089 505 271 17 10 469 9 481 1.72e-58 201
Msa1441220 AT3G21780.1 31.942 479 267 16 15 460 5 457 4.94e-58 199
Msa1441220 AT1G22380.1 31.377 494 244 19 11 452 10 460 2.13e-56 195
Msa1441220 AT1G22340.1 30.392 510 268 18 10 470 9 480 3.23e-56 194
Msa1441220 AT2G15490.1 29.918 488 288 14 15 467 8 476 7.80e-56 193
Msa1441220 AT5G14860.1 30.629 493 270 19 16 467 10 471 1.18e-55 193
Msa1441220 AT2G15490.3 29.918 488 285 14 15 467 8 473 1.66e-55 192
Msa1441220 AT4G15260.1 34.232 371 197 13 123 467 1 350 5.68e-55 187
Msa1441220 AT2G15480.1 30.000 490 282 16 15 467 11 476 9.72e-55 191
Msa1441220 AT2G16890.2 30.498 482 283 16 15 470 10 465 5.66e-54 188
Msa1441220 AT2G36800.1 30.339 501 281 17 10 467 8 483 9.18e-54 188
Msa1441220 AT1G22360.1 29.592 490 279 16 9 460 5 466 1.21e-53 187
Msa1441220 AT2G36770.1 29.344 518 281 19 1 467 1 484 4.37e-53 186
Msa1441220 AT2G15480.2 29.400 500 282 16 15 467 11 486 5.05e-53 186
Msa1441220 AT1G73880.1 29.980 497 283 19 1 467 1 462 1.16e-51 182
Msa1441220 AT2G36970.1 29.012 486 285 15 10 462 6 464 1.67e-51 182
Msa1441220 AT1G10400.1 30.223 493 280 19 15 476 8 467 1.84e-50 179
Msa1441220 AT4G34131.1 29.175 497 276 17 15 467 11 475 2.31e-50 179
Msa1441220 AT2G36780.1 30.266 489 284 18 16 467 16 484 3.25e-50 179
Msa1441220 AT3G11340.1 30.108 465 283 14 13 467 8 440 4.67e-50 177
Msa1441220 AT3G53150.1 30.906 508 269 21 16 467 24 505 5.48e-50 178
Msa1441220 AT3G53160.1 28.906 512 269 16 12 467 6 478 6.24e-49 175
Msa1441220 AT5G03490.1 27.778 486 283 15 10 468 15 459 2.06e-48 173
Msa1441220 AT1G22360.2 28.512 484 268 16 15 460 11 454 2.34e-48 173
Msa1441220 AT2G43820.1 29.959 484 273 16 15 474 8 449 3.66e-48 172
Msa1441220 AT1G22370.2 29.707 478 270 16 11 453 10 456 4.99e-48 172
Msa1441220 AT2G31750.1 29.938 481 276 15 15 470 9 453 2.62e-47 170
Msa1441220 AT5G12890.1 30.480 479 283 17 15 461 11 471 5.48e-47 170
Msa1441220 AT2G31750.2 29.938 481 276 15 15 470 9 453 6.04e-47 169
Msa1441220 AT2G30140.2 29.098 488 288 13 7 473 2 452 2.58e-46 167
Msa1441220 AT2G30140.1 29.039 489 288 13 7 473 2 453 3.07e-46 167
Msa1441220 AT2G16890.3 30.068 439 255 16 15 427 10 422 3.68e-46 166
Msa1441220 AT4G34138.1 30.691 391 235 11 92 467 105 474 4.25e-46 167
Msa1441220 AT2G36790.1 28.119 505 282 15 12 467 11 483 7.23e-46 167
Msa1441220 AT2G36760.1 27.626 514 289 14 1 464 1 481 1.54e-45 166
Msa1441220 AT2G36750.1 27.470 506 286 18 11 467 6 479 2.26e-45 165
Msa1441220 AT2G31790.1 28.838 482 286 12 10 467 4 452 3.12e-45 164
Msa1441220 AT3G46670.1 29.185 466 280 13 15 464 10 441 3.74e-45 164
Msa1441220 AT4G34135.1 31.117 376 218 11 118 473 129 483 1.36e-43 160
Msa1441220 AT2G43840.2 29.472 492 257 15 15 470 8 445 1.38e-43 159
Msa1441220 AT3G02100.1 26.653 484 286 12 13 467 12 455 1.42e-43 160
Msa1441220 AT2G30150.2 30.753 478 257 17 15 464 14 445 2.52e-43 159
Msa1441220 AT3G55700.1 29.462 465 289 16 15 467 9 446 2.74e-43 159
Msa1441220 AT1G05675.1 29.211 469 291 13 15 468 7 449 4.53e-43 158
Msa1441220 AT1G05680.1 29.958 474 281 15 15 468 7 449 5.23e-43 158
Msa1441220 AT2G43840.1 28.715 498 253 15 15 470 8 445 5.54e-43 158
Msa1441220 AT2G30150.1 30.802 474 256 17 18 464 1 429 1.47e-42 157
Msa1441220 AT1G51210.1 28.477 453 266 16 13 446 19 432 2.70e-42 155
Msa1441220 AT3G46660.1 29.424 469 283 16 15 467 15 451 3.51e-42 156
Msa1441220 AT1G24100.1 30.309 485 264 18 15 467 12 454 1.12e-41 155
Msa1441220 AT1G22370.1 37.358 265 131 9 203 453 43 286 6.55e-41 149
Msa1441220 AT5G05870.1 30.997 371 219 10 111 468 105 451 1.22e-40 152
Msa1441220 AT3G46680.1 28.059 474 298 16 7 467 2 445 1.94e-40 151
Msa1441220 AT3G21560.1 27.038 503 310 19 1 474 1 475 3.09e-40 151
Msa1441220 AT5G05880.1 26.866 469 294 13 15 467 9 444 1.19e-39 149
Msa1441220 AT5G05860.1 28.085 470 287 15 15 468 10 444 2.23e-39 148
Msa1441220 AT4G14090.1 27.824 478 274 16 11 460 10 444 2.54e-39 148
Msa1441220 AT4G15550.1 28.571 476 295 17 13 464 12 466 9.89e-39 147
Msa1441220 AT5G59580.1 27.801 482 287 17 7 467 2 443 1.17e-38 146
Msa1441220 AT3G46690.1 28.452 478 275 15 15 467 10 445 1.30e-38 146
Msa1441220 AT5G59590.1 26.971 482 294 16 6 467 2 445 1.48e-38 146
Msa1441220 AT1G05560.1 28.512 477 282 16 12 464 3 444 1.29e-37 144
Msa1441220 AT3G55710.1 28.074 488 280 19 11 468 5 451 2.26e-37 143
Msa1441220 AT2G28080.1 30.294 340 206 11 116 443 127 447 2.57e-37 143
Msa1441220 AT1G05560.2 28.512 477 282 16 12 464 53 494 2.83e-37 144
Msa1441220 AT4G15480.1 28.980 490 296 19 8 470 13 477 3.02e-37 143
Msa1441220 AT2G26480.1 28.364 483 266 19 15 467 9 441 5.81e-37 141
Msa1441220 AT3G46650.1 26.824 466 274 16 15 464 11 425 8.64e-37 140
Msa1441220 AT5G38010.1 27.572 486 272 17 15 467 11 449 1.19e-36 140
Msa1441220 AT3G46700.1 26.068 468 296 15 15 468 10 441 2.30e-36 140
Msa1441220 AT4G15500.1 25.911 494 314 17 10 479 5 470 6.44e-36 139
Msa1441220 AT1G06000.1 27.637 474 277 16 10 467 6 429 1.45e-35 137
Msa1441220 AT5G49690.1 27.655 452 279 13 15 448 11 432 1.49e-34 135
Msa1441220 AT5G05890.1 27.637 474 288 16 15 467 9 448 1.32e-33 132
Msa1441220 AT4G15490.1 27.000 500 296 19 10 474 4 469 1.48e-33 132
Msa1441220 AT5G05900.1 28.661 478 273 20 15 467 9 443 2.59e-33 131
Msa1441220 AT3G46720.1 26.415 477 279 13 15 468 10 437 4.84e-33 130
Msa1441220 AT1G05530.1 27.731 476 288 16 13 464 4 447 8.99e-33 130
Msa1441220 AT5G65550.1 26.549 452 285 15 11 440 5 431 3.58e-32 128
Msa1441220 AT2G23260.1 25.709 494 265 17 15 464 11 446 5.62e-32 127
Msa1441220 AT5G17050.1 27.660 376 236 8 105 467 100 452 4.75e-31 125
Msa1441220 AT2G23250.1 24.454 458 298 13 24 467 8 431 9.24e-31 124
Msa1441220 AT5G38040.1 28.151 476 296 16 6 467 2 445 1.98e-30 123
Msa1441220 AT1G64910.1 27.617 449 269 15 17 448 9 418 4.45e-29 119
Msa1441220 AT5G37950.2 31.010 287 161 9 110 385 77 337 1.51e-27 113
Msa1441220 AT1G30530.1 25.641 351 231 5 116 460 113 439 1.95e-27 114
Msa1441220 AT5G17040.1 27.174 368 214 13 116 467 106 435 8.16e-27 112
Msa1441220 AT5G37950.1 30.822 292 161 10 110 385 77 343 9.11e-27 111
Msa1441220 AT5G54060.1 27.216 485 281 22 15 467 14 458 5.17e-26 110
Msa1441220 AT5G17030.1 26.722 363 216 12 126 467 118 451 8.73e-26 110
Msa1441220 AT5G17040.2 30.769 260 141 9 218 467 103 333 1.02e-25 108
Msa1441220 AT3G22250.1 25.413 484 273 18 9 450 3 440 1.55e-25 109
Msa1441220 AT1G64920.1 29.304 273 165 8 194 451 166 425 4.44e-24 105
Msa1441220 AT1G50580.1 26.025 488 278 18 17 473 9 444 4.45e-24 105
Msa1441220 AT5G53990.1 30.147 272 154 8 194 448 166 418 6.79e-24 104
Msa1441220 AT2G22590.1 32.632 190 107 4 263 447 273 446 1.02e-23 103
Msa1441220 AT3G29630.1 26.724 464 259 19 17 449 9 422 1.61e-23 103
Msa1441220 AT5G54010.1 33.529 170 101 1 263 432 249 406 8.86e-23 101
Msa1441220 AT2G22930.1 24.138 493 266 16 17 468 9 434 2.37e-22 99.8
Msa1441220 AT4G27570.1 31.250 192 118 2 262 451 248 427 2.94e-22 99.8
Msa1441220 AT3G29630.2 32.632 190 113 3 263 449 219 396 2.12e-21 96.7
Msa1441220 AT4G27560.1 29.126 206 132 2 262 467 248 439 6.56e-21 95.5
Msa1441220 AT4G09500.1 31.844 179 108 2 272 448 227 393 1.54e-19 91.3
Msa1441220 AT4G09500.2 31.844 179 108 2 272 448 252 418 1.61e-19 91.3
Msa1441220 AT2G16890.4 27.331 311 194 14 15 302 10 311 2.77e-15 77.0
Msa1441220 AT2G16890.1 27.331 311 194 14 15 302 10 311 2.77e-15 77.0
Msa1441220 AT4G34135.2 30.244 205 122 9 118 308 129 326 1.92e-13 72.0

Find 130 sgRNAs with CRISPR-Local

Find 326 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAGGGTAGAAGACATATTT+AGG 0.144807 tig0029236:+12011 None:intergenic
GCTCCACTTGAGAGCTAAAT+TGG 0.233996 tig0029236:+11029 None:intergenic
GGCCCCACAACCACAGGTTT+TGG 0.263445 tig0029236:-11373 Msa1441220:CDS
GCTGTTGTCGTCGACCTCTT+TGG 0.271867 tig0029236:-12071 Msa1441220:CDS
AGTGTTCTGTTTGTTTCTTT+TGG 0.291000 tig0029236:-11609 Msa1441220:CDS
CCTGGTTGTATTCCGATTCA+TGG 0.311024 tig0029236:-11894 Msa1441220:CDS
AACAGGGAAGTAGGTCAAAT+TGG 0.322029 tig0029236:-11678 Msa1441220:CDS
CCTACTTCCCTGTTTACTAA+TGG 0.329846 tig0029236:+11687 None:intergenic
CTGTTGTCGTCGACCTCTTT+GGG 0.334424 tig0029236:-12070 Msa1441220:CDS
TTGATGAAGAATAATTCTTT+TGG 0.338742 tig0029236:+12325 None:intergenic
TCCTTTAGTAACTCCTTGAT+TGG 0.343560 tig0029236:+11744 None:intergenic
GCATTAGCAACTTTATCATT+TGG 0.345091 tig0029236:+11495 None:intergenic
GAATGGTTTGGTTGAGAGAT+TGG 0.347103 tig0029236:-11181 Msa1441220:CDS
GTTCTTGAGAGTGTTGTTAA+TGG 0.348520 tig0029236:-11303 Msa1441220:CDS
TGAGAGCTAAATTGGAGATA+TGG 0.350096 tig0029236:+11037 None:intergenic
GGGGTCTTGTCGTGTCATCT+TGG 0.352591 tig0029236:-11395 Msa1441220:CDS
ATGGGGTGCCTTTAGTGGTT+TGG 0.358671 tig0029236:-11284 Msa1441220:CDS
TGGGCCAAAACCTGTGGTTG+TGG 0.370133 tig0029236:+11369 None:intergenic
CGGTCGGACCATTAGTAAAC+AGG 0.371386 tig0029236:-11695 Msa1441220:CDS
TTCTTGAGAGTGTTGTTAAT+GGG 0.374147 tig0029236:-11302 Msa1441220:CDS
TTATCAAATGAAGGATCTTA+AGG 0.394518 tig0029236:-11103 Msa1441220:CDS
GGAGTTACTAAAGGAAGAAC+CGG 0.400542 tig0029236:-11736 Msa1441220:CDS
AATTGAATTGGCACTTGGCT+TGG 0.400865 tig0029236:-11556 Msa1441220:CDS
TAGTGTTGTTAAGTGTCTTA+TGG 0.405478 tig0029236:-11151 Msa1441220:CDS
TGTTAATGGGGTGCCTTTAG+TGG 0.406882 tig0029236:-11289 Msa1441220:CDS
AAACCATTCTCACCAACATT+TGG 0.408050 tig0029236:+11195 None:intergenic
GGGCCAAAACCTGTGGTTGT+GGG 0.411856 tig0029236:+11370 None:intergenic
AAGGGTAGAAGACATATTTA+GGG 0.416669 tig0029236:+12012 None:intergenic
AAAGTATGTGAAATGGACTT+TGG 0.416845 tig0029236:+12227 None:intergenic
TTGGACCTGGTTCAAGTTCA+AGG 0.418978 tig0029236:+11763 None:intergenic
TAAACTCGCAGTGAACTTCC+TGG 0.419329 tig0029236:+11943 None:intergenic
ACTGAACCGGTGAAAATTCC+TGG 0.420166 tig0029236:-11912 Msa1441220:CDS
AGACCAAATGTTGGTGAGAA+TGG 0.433975 tig0029236:-11198 Msa1441220:CDS
ACCAAAGTGTCCTTCGCAAC+GGG 0.437617 tig0029236:-11827 Msa1441220:CDS
GCTAAAACTCTTGGTGAGAA+TGG 0.440725 tig0029236:-11072 Msa1441220:CDS
AGTAAATATTTACCATGAAT+CGG 0.443850 tig0029236:+11882 None:intergenic
TTGGCCCATGGCTCAACTGG+TGG 0.447583 tig0029236:-11354 Msa1441220:CDS
GGGTCTTGTCGTGTCATCTT+GGG 0.447867 tig0029236:-11394 Msa1441220:CDS
TCAGACCTTCCACCAACCTC+CGG 0.455220 tig0029236:-12185 Msa1441220:CDS
CGAACTCAGAGAGTTTGAAT+TGG 0.456903 tig0029236:-11653 Msa1441220:CDS
GGAAGGTCTGAGAAGGAAAC+TGG 0.457485 tig0029236:+12197 None:intergenic
CACGACAAGACCCCTCCCTT+TGG 0.461413 tig0029236:+11404 None:intergenic
CAGATAATTGAATTGGCACT+TGG 0.466391 tig0029236:-11561 Msa1441220:CDS
TAGTAAACAGATAATTGAAT+TGG 0.466721 tig0029236:-11568 Msa1441220:CDS
TTAACTGAGGATGTTAAGGT+TGG 0.467159 tig0029236:-11225 Msa1441220:CDS
GGTCCGACCGGGTAAAACTT+AGG 0.468520 tig0029236:+11708 None:intergenic
GTTTAGAGAATTGACTGAAC+CGG 0.474048 tig0029236:-11925 Msa1441220:CDS
GTCTCTATCCCGGAGGTTGG+TGG 0.474825 tig0029236:+12176 None:intergenic
TGTCTTATGGAAGGTGAAGA+AGG 0.475347 tig0029236:-11138 Msa1441220:CDS
CGTTCTTCCTGTCTTGAAGC+GGG 0.475586 tig0029236:+11856 None:intergenic
TAAATTGGAGATATGGTTTG+TGG 0.478154 tig0029236:+11044 None:intergenic
TCCCGTTGCGAAGGACACTT+TGG 0.478662 tig0029236:+11826 None:intergenic
GAGAGAGCCATGGCAGTTGA+AGG 0.486832 tig0029236:+11993 None:intergenic
TACTAGACCCGCTTCAAGAC+AGG 0.487721 tig0029236:-11863 Msa1441220:CDS
ACCATTATCAAAACCACCTA+TGG 0.488016 tig0029236:-12402 Msa1441220:CDS
TGGCCCATGGCTCAACTGGT+GGG 0.488819 tig0029236:-11353 Msa1441220:CDS
CTGTTTACTAATGGTCCGAC+CGG 0.491650 tig0029236:+11696 None:intergenic
CAATTCAAACTCTCTGAGTT+CGG 0.496429 tig0029236:+11654 None:intergenic
TAACTGAGGATGTTAAGGTT+GGG 0.496789 tig0029236:-11224 Msa1441220:CDS
AAATGTTGGTGAGAATGGTT+TGG 0.502614 tig0029236:-11193 Msa1441220:CDS
CAATTATCTGTTTACTAGAG+AGG 0.502853 tig0029236:+11574 None:intergenic
AGTAACTCCTTGATTGGACC+TGG 0.503207 tig0029236:+11750 None:intergenic
ATCTTGGGCCCCACAACCAC+AGG 0.503775 tig0029236:-11379 Msa1441220:CDS
ACCTTCTTCATTCCCAGTGA+TGG 0.506969 tig0029236:-12290 Msa1441220:CDS
AAAGCTTCGTTATCAAATGA+AGG 0.510389 tig0029236:-11112 Msa1441220:CDS
GGCCAAAACCTGTGGTTGTG+GGG 0.511998 tig0029236:+11371 None:intergenic
AATTATCTGTTTACTAGAGA+GGG 0.512027 tig0029236:+11575 None:intergenic
GATGCAGCTGCTAAAACTCT+TGG 0.515713 tig0029236:-11081 Msa1441220:CDS
AAAAGTGGCCAAACCACTAA+AGG 0.518321 tig0029236:+11276 None:intergenic
CGCAGTGAACTTCCTGGTCA+AGG 0.520333 tig0029236:+11949 None:intergenic
TTACCTTCCTCGCCTTGACC+AGG 0.530872 tig0029236:-11961 Msa1441220:CDS
TCCAATCAAGGAGTTACTAA+AGG 0.531207 tig0029236:-11745 Msa1441220:CDS
CTTCTACCCTTCAACTGCCA+TGG 0.537818 tig0029236:-12000 Msa1441220:CDS
CTTCCTGGTCAAGGCGAGGA+AGG 0.537921 tig0029236:+11958 None:intergenic
TCGTTCTTCCTGTCTTGAAG+CGG 0.541505 tig0029236:+11855 None:intergenic
GACGGAGAGAAGGGAGAGAA+CGG 0.541625 tig0029236:+12132 None:intergenic
AAAACCCACCAGTTGAGCCA+TGG 0.543571 tig0029236:+11349 None:intergenic
TTTGAAGGTGGACCATCACT+GGG 0.551789 tig0029236:+12278 None:intergenic
CCATTAGTAAACAGGGAAGT+AGG 0.555080 tig0029236:-11687 Msa1441220:CDS
TTTGGAGAGAACCAAAGGGA+GGG 0.555541 tig0029236:-11415 Msa1441220:CDS
TGGAAGGAAAGTATGTGAAA+TGG 0.560198 tig0029236:+12220 None:intergenic
CCATTTGGTAGAAAATCAAA+AGG 0.560575 tig0029236:+11441 None:intergenic
AAACCCACCAGTTGAGCCAT+GGG 0.561495 tig0029236:+11350 None:intergenic
TTGGAGAGAACCAAAGGGAG+GGG 0.561505 tig0029236:-11414 Msa1441220:CDS
TACCAAAGTGTCCTTCGCAA+CGG 0.563292 tig0029236:-11828 Msa1441220:CDS
TCTCCAATTTAGCTCTCAAG+TGG 0.565045 tig0029236:-11032 Msa1441220:CDS
GATGCTACCATCACCAGGCA+TGG 0.565635 tig0029236:-12375 Msa1441220:CDS
AGTTTCCTTGAACTTGAACC+AGG 0.566621 tig0029236:-11768 Msa1441220:CDS
ATTGTCTCTATCCCGGAGGT+TGG 0.568039 tig0029236:+12173 None:intergenic
ACCATCACTGGGAATGAAGA+AGG 0.570806 tig0029236:+12289 None:intergenic
GGAGATGATTGTCTCTATCC+CGG 0.570894 tig0029236:+12166 None:intergenic
TGTATCTCTTCCCGTTGCGA+AGG 0.571192 tig0029236:+11817 None:intergenic
ACTTGAACCAGGTCCAATCA+AGG 0.573400 tig0029236:-11757 Msa1441220:CDS
GGTATAAGATGTCCCATGCC+TGG 0.573975 tig0029236:+12362 None:intergenic
GGTCAAGGCGAGGAAGGTAA+AGG 0.574296 tig0029236:+11964 None:intergenic
CAGACCTTCCACCAACCTCC+GGG 0.574414 tig0029236:-12184 Msa1441220:CDS
GTCTTATGGAAGGTGAAGAA+GGG 0.575929 tig0029236:-11137 Msa1441220:CDS
TCTTGAGAGTGTTGTTAATG+GGG 0.577147 tig0029236:-11301 Msa1441220:CDS
GATGGTAGCATCACAACCAT+AGG 0.581726 tig0029236:+12386 None:intergenic
TTTAATTTAATTTATTACAG+TGG 0.583193 tig0029236:+10999 None:intergenic
ACTGTTCTCTATAAGTCCAT+CGG 0.585353 tig0029236:+11788 None:intergenic
GGAGAGAACGGAGGACAGTG+AGG 0.586768 tig0029236:+12144 None:intergenic
CTATCCCGGAGGTTGGTGGA+AGG 0.591411 tig0029236:+12180 None:intergenic
AGAGAGCCATGGCAGTTGAA+GGG 0.595347 tig0029236:+11994 None:intergenic
GAGAGAACGGAGGACAGTGA+GGG 0.597493 tig0029236:+12145 None:intergenic
CCATGAATCGGAATACAACC+AGG 0.598682 tig0029236:+11894 None:intergenic
CTTTGGAAGAGATTGAAGAA+CGG 0.599659 tig0029236:+12244 None:intergenic
GCTTGGAAATGAGTGAGCAA+CGG 0.608049 tig0029236:-11539 Msa1441220:CDS
GTTGTGATGCTACCATCACC+AGG 0.614178 tig0029236:-12380 Msa1441220:CDS
CAAAAGCGTCTGTCCCAAAG+AGG 0.616837 tig0029236:+12057 None:intergenic
GTTGTTAAGTGTCTTATGGA+AGG 0.618733 tig0029236:-11147 Msa1441220:CDS
GGTTGGTGGAAGGTCTGAGA+AGG 0.622977 tig0029236:+12190 None:intergenic
AAGAGATACAGAGAAGCCGA+TGG 0.629191 tig0029236:-11804 Msa1441220:CDS
CTGAGAAGGAAACTGGTGGA+AGG 0.631182 tig0029236:+12204 None:intergenic
AGATGTCCCATGCCTGGTGA+TGG 0.631411 tig0029236:+12368 None:intergenic
ATGCTACCATCACCAGGCAT+GGG 0.635148 tig0029236:-12374 Msa1441220:CDS
TGAACTTCCTGGTCAAGGCG+AGG 0.638486 tig0029236:+11954 None:intergenic
TGTTTACTAATGGTCCGACC+GGG 0.651159 tig0029236:+11697 None:intergenic
AGGTCTGAGAAGGAAACTGG+TGG 0.654101 tig0029236:+12200 None:intergenic
GGTAGCATCACAACCATAGG+TGG 0.656275 tig0029236:+12389 None:intergenic
GGTCGGACCATTAGTAAACA+GGG 0.660909 tig0029236:-11694 Msa1441220:CDS
GGAGAGAAGGGAGAGAACGG+AGG 0.676724 tig0029236:+12135 None:intergenic
TGGTTAGATAATCAACCACA+CGG 0.677827 tig0029236:-11633 Msa1441220:CDS
AAGGAAAAGAGAGAGAGCCA+TGG 0.679106 tig0029236:+11983 None:intergenic
GAGCCATGGGCCAAAACCTG+TGG 0.692544 tig0029236:+11363 None:intergenic
GAGTTACTAAAGGAAGAACC+GGG 0.698164 tig0029236:-11735 Msa1441220:CDS
GTTGGGTTGAGACCAAATGT+TGG 0.703565 tig0029236:-11207 Msa1441220:CDS
GATGATTGTCTCTATCCCGG+AGG 0.728209 tig0029236:+12169 None:intergenic
GGTTAGATAATCAACCACAC+GGG 0.730085 tig0029236:-11632 Msa1441220:CDS
ACAAACAGAACACTCCCGTG+TGG 0.741315 tig0029236:+11618 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTGATGAAGAATAATTCTTT+TGG + tig0029236:11105-11124 None:intergenic 20.0%
!! AGTAAATATTTACCATGAAT+CGG + tig0029236:11548-11567 None:intergenic 20.0%
!! TAGTAAACAGATAATTGAAT+TGG - tig0029236:11859-11878 Msa1441220:CDS 20.0%
!!! TTGATGAAGAATAATTCTTT+TGG + tig0029236:11105-11124 None:intergenic 20.0%
!! AGTAAATATTTACCATGAAT+CGG + tig0029236:11548-11567 None:intergenic 20.0%
!! TAGTAAACAGATAATTGAAT+TGG - tig0029236:11859-11878 Msa1441220:CDS 20.0%
! AATTATCTGTTTACTAGAGA+GGG + tig0029236:11855-11874 None:intergenic 25.0%
!!! CTTTTGATTTTCTACCAAAT+GGG - tig0029236:11987-12006 Msa1441220:CDS 25.0%
!!! TATTTTAACTGAGGATGTTA+AGG - tig0029236:12198-12217 Msa1441220:CDS 25.0%
! TTATCAAATGAAGGATCTTA+AGG - tig0029236:12324-12343 Msa1441220:CDS 25.0%
! AATTATCTGTTTACTAGAGA+GGG + tig0029236:11855-11874 None:intergenic 25.0%
!!! CTTTTGATTTTCTACCAAAT+GGG - tig0029236:11987-12006 Msa1441220:CDS 25.0%
!!! TATTTTAACTGAGGATGTTA+AGG - tig0029236:12198-12217 Msa1441220:CDS 25.0%
! TTATCAAATGAAGGATCTTA+AGG - tig0029236:12324-12343 Msa1441220:CDS 25.0%
!!! AGATTGAAGAACGGTTTTTT+GGG + tig0029236:11177-11196 None:intergenic 30.0%
! AAAGTATGTGAAATGGACTT+TGG + tig0029236:11203-11222 None:intergenic 30.0%
AAGGGTAGAAGACATATTTA+GGG + tig0029236:11418-11437 None:intergenic 30.0%
!! AGTGTTCTGTTTGTTTCTTT+TGG - tig0029236:11818-11837 Msa1441220:CDS 30.0%
CAATTATCTGTTTACTAGAG+AGG + tig0029236:11856-11875 None:intergenic 30.0%
GCATTAGCAACTTTATCATT+TGG + tig0029236:11935-11954 None:intergenic 30.0%
CCATTTGGTAGAAAATCAAA+AGG + tig0029236:11989-12008 None:intergenic 30.0%
!!! CCTTTTGATTTTCTACCAAA+TGG - tig0029236:11986-12005 Msa1441220:CDS 30.0%
!! TTTTCTACCAAATGGGTTTT+TGG - tig0029236:11994-12013 Msa1441220:CDS 30.0%
!! TTCTTGAGAGTGTTGTTAAT+GGG - tig0029236:12125-12144 Msa1441220:CDS 30.0%
!!! GAATGCTGTTATTTTAACTG+AGG - tig0029236:12189-12208 Msa1441220:CDS 30.0%
! TAGTGTTGTTAAGTGTCTTA+TGG - tig0029236:12276-12295 Msa1441220:CDS 30.0%
AAAGCTTCGTTATCAAATGA+AGG - tig0029236:12315-12334 Msa1441220:CDS 30.0%
TAAATTGGAGATATGGTTTG+TGG + tig0029236:12386-12405 None:intergenic 30.0%
!!! AGATTGAAGAACGGTTTTTT+GGG + tig0029236:11177-11196 None:intergenic 30.0%
! AAAGTATGTGAAATGGACTT+TGG + tig0029236:11203-11222 None:intergenic 30.0%
AAGGGTAGAAGACATATTTA+GGG + tig0029236:11418-11437 None:intergenic 30.0%
!! AGTGTTCTGTTTGTTTCTTT+TGG - tig0029236:11818-11837 Msa1441220:CDS 30.0%
CAATTATCTGTTTACTAGAG+AGG + tig0029236:11856-11875 None:intergenic 30.0%
GCATTAGCAACTTTATCATT+TGG + tig0029236:11935-11954 None:intergenic 30.0%
CCATTTGGTAGAAAATCAAA+AGG + tig0029236:11989-12008 None:intergenic 30.0%
!!! CCTTTTGATTTTCTACCAAA+TGG - tig0029236:11986-12005 Msa1441220:CDS 30.0%
!! TTTTCTACCAAATGGGTTTT+TGG - tig0029236:11994-12013 Msa1441220:CDS 30.0%
!! TTCTTGAGAGTGTTGTTAAT+GGG - tig0029236:12125-12144 Msa1441220:CDS 30.0%
!!! GAATGCTGTTATTTTAACTG+AGG - tig0029236:12189-12208 Msa1441220:CDS 30.0%
! TAGTGTTGTTAAGTGTCTTA+TGG - tig0029236:12276-12295 Msa1441220:CDS 30.0%
AAAGCTTCGTTATCAAATGA+AGG - tig0029236:12315-12334 Msa1441220:CDS 30.0%
TAAATTGGAGATATGGTTTG+TGG + tig0029236:12386-12405 None:intergenic 30.0%
ACCATTATCAAAACCACCTA+TGG - tig0029236:11025-11044 Msa1441220:CDS 35.0%
!!! ACCATAGGTGGTTTTGATAA+TGG + tig0029236:11029-11048 None:intergenic 35.0%
! CTTTTGGCGAATTCAATCAT+TGG + tig0029236:11089-11108 None:intergenic 35.0%
!!! GAGATTGAAGAACGGTTTTT+TGG + tig0029236:11178-11197 None:intergenic 35.0%
! CTTTGGAAGAGATTGAAGAA+CGG + tig0029236:11186-11205 None:intergenic 35.0%
! TGGAAGGAAAGTATGTGAAA+TGG + tig0029236:11210-11229 None:intergenic 35.0%
!!! AGAGAGTGTTGAAGTTTTGA+CGG + tig0029236:11316-11335 None:intergenic 35.0%
GAAGGGTAGAAGACATATTT+AGG + tig0029236:11419-11438 None:intergenic 35.0%
GTTTAGAGAATTGACTGAAC+CGG - tig0029236:11502-11521 Msa1441220:CDS 35.0%
! ATACAACCAGGAATTTTCAC+CGG + tig0029236:11524-11543 None:intergenic 35.0%
ACTGTTCTCTATAAGTCCAT+CGG + tig0029236:11642-11661 None:intergenic 35.0%
TCCAATCAAGGAGTTACTAA+AGG - tig0029236:11682-11701 Msa1441220:CDS 35.0%
TCCTTTAGTAACTCCTTGAT+TGG + tig0029236:11686-11705 None:intergenic 35.0%
CAATTCAAACTCTCTGAGTT+CGG + tig0029236:11776-11795 None:intergenic 35.0%
TGGTTAGATAATCAACCACA+CGG - tig0029236:11794-11813 Msa1441220:CDS 35.0%
!! CTGTTTGTTTCTTTTGGAAG+TGG - tig0029236:11824-11843 Msa1441220:CDS 35.0%
!! TTTGTTTCTTTTGGAAGTGG+TGG - tig0029236:11827-11846 Msa1441220:CDS 35.0%
!! TTGTTTCTTTTGGAAGTGGT+GGG - tig0029236:11828-11847 Msa1441220:CDS 35.0%
CAGATAATTGAATTGGCACT+TGG - tig0029236:11866-11885 Msa1441220:CDS 35.0%
!! GTTCTTGAGAGTGTTGTTAA+TGG - tig0029236:12124-12143 Msa1441220:CDS 35.0%
!! TCTTGAGAGTGTTGTTAATG+GGG - tig0029236:12126-12145 Msa1441220:CDS 35.0%
! ATCTTTTGCTCTGCAAAAAG+TGG + tig0029236:12169-12188 None:intergenic 35.0%
TTAACTGAGGATGTTAAGGT+TGG - tig0029236:12202-12221 Msa1441220:CDS 35.0%
TAACTGAGGATGTTAAGGTT+GGG - tig0029236:12203-12222 Msa1441220:CDS 35.0%
AAACCATTCTCACCAACATT+TGG + tig0029236:12235-12254 None:intergenic 35.0%
! AAATGTTGGTGAGAATGGTT+TGG - tig0029236:12234-12253 Msa1441220:CDS 35.0%
GTTGTTAAGTGTCTTATGGA+AGG - tig0029236:12280-12299 Msa1441220:CDS 35.0%
TGAGAGCTAAATTGGAGATA+TGG + tig0029236:12393-12412 None:intergenic 35.0%
ACCATTATCAAAACCACCTA+TGG - tig0029236:11025-11044 Msa1441220:CDS 35.0%
!!! ACCATAGGTGGTTTTGATAA+TGG + tig0029236:11029-11048 None:intergenic 35.0%
! CTTTTGGCGAATTCAATCAT+TGG + tig0029236:11089-11108 None:intergenic 35.0%
!!! GAGATTGAAGAACGGTTTTT+TGG + tig0029236:11178-11197 None:intergenic 35.0%
! CTTTGGAAGAGATTGAAGAA+CGG + tig0029236:11186-11205 None:intergenic 35.0%
! TGGAAGGAAAGTATGTGAAA+TGG + tig0029236:11210-11229 None:intergenic 35.0%
!!! AGAGAGTGTTGAAGTTTTGA+CGG + tig0029236:11316-11335 None:intergenic 35.0%
GAAGGGTAGAAGACATATTT+AGG + tig0029236:11419-11438 None:intergenic 35.0%
GTTTAGAGAATTGACTGAAC+CGG - tig0029236:11502-11521 Msa1441220:CDS 35.0%
! ATACAACCAGGAATTTTCAC+CGG + tig0029236:11524-11543 None:intergenic 35.0%
ACTGTTCTCTATAAGTCCAT+CGG + tig0029236:11642-11661 None:intergenic 35.0%
TCCAATCAAGGAGTTACTAA+AGG - tig0029236:11682-11701 Msa1441220:CDS 35.0%
TCCTTTAGTAACTCCTTGAT+TGG + tig0029236:11686-11705 None:intergenic 35.0%
CAATTCAAACTCTCTGAGTT+CGG + tig0029236:11776-11795 None:intergenic 35.0%
TGGTTAGATAATCAACCACA+CGG - tig0029236:11794-11813 Msa1441220:CDS 35.0%
!! CTGTTTGTTTCTTTTGGAAG+TGG - tig0029236:11824-11843 Msa1441220:CDS 35.0%
!! TTTGTTTCTTTTGGAAGTGG+TGG - tig0029236:11827-11846 Msa1441220:CDS 35.0%
!! TTGTTTCTTTTGGAAGTGGT+GGG - tig0029236:11828-11847 Msa1441220:CDS 35.0%
CAGATAATTGAATTGGCACT+TGG - tig0029236:11866-11885 Msa1441220:CDS 35.0%
!! GTTCTTGAGAGTGTTGTTAA+TGG - tig0029236:12124-12143 Msa1441220:CDS 35.0%
!! TCTTGAGAGTGTTGTTAATG+GGG - tig0029236:12126-12145 Msa1441220:CDS 35.0%
! ATCTTTTGCTCTGCAAAAAG+TGG + tig0029236:12169-12188 None:intergenic 35.0%
TTAACTGAGGATGTTAAGGT+TGG - tig0029236:12202-12221 Msa1441220:CDS 35.0%
TAACTGAGGATGTTAAGGTT+GGG - tig0029236:12203-12222 Msa1441220:CDS 35.0%
AAACCATTCTCACCAACATT+TGG + tig0029236:12235-12254 None:intergenic 35.0%
! AAATGTTGGTGAGAATGGTT+TGG - tig0029236:12234-12253 Msa1441220:CDS 35.0%
GTTGTTAAGTGTCTTATGGA+AGG - tig0029236:12280-12299 Msa1441220:CDS 35.0%
TGAGAGCTAAATTGGAGATA+TGG + tig0029236:12393-12412 None:intergenic 35.0%
!!! GTTTTTTGGGCTTTTGAAGG+TGG + tig0029236:11164-11183 None:intergenic 40.0%
!!! ACGGTTTTTTGGGCTTTTGA+AGG + tig0029236:11167-11186 None:intergenic 40.0%
!! TGAAGTTTTGACGGAGAGAA+GGG + tig0029236:11307-11326 None:intergenic 40.0%
!! TTGAAGTTTTGACGGAGAGA+AGG + tig0029236:11308-11327 None:intergenic 40.0%
AGTTTCCTTGAACTTGAACC+AGG - tig0029236:11659-11678 Msa1441220:CDS 40.0%
GGAGTTACTAAAGGAAGAAC+CGG - tig0029236:11691-11710 Msa1441220:CDS 40.0%
GAGTTACTAAAGGAAGAACC+GGG - tig0029236:11692-11711 Msa1441220:CDS 40.0%
! GGGTAAAACTTAGGTTTTCC+CGG + tig0029236:11713-11732 None:intergenic 40.0%
! GGGAAAACCTAAGTTTTACC+CGG - tig0029236:11712-11731 Msa1441220:CDS 40.0%
! AAACCTAAGTTTTACCCGGT+CGG - tig0029236:11716-11735 Msa1441220:CDS 40.0%
CCTACTTCCCTGTTTACTAA+TGG + tig0029236:11743-11762 None:intergenic 40.0%
CCATTAGTAAACAGGGAAGT+AGG - tig0029236:11740-11759 Msa1441220:CDS 40.0%
AACAGGGAAGTAGGTCAAAT+TGG - tig0029236:11749-11768 Msa1441220:CDS 40.0%
CGAACTCAGAGAGTTTGAAT+TGG - tig0029236:11774-11793 Msa1441220:CDS 40.0%
GGTTAGATAATCAACCACAC+GGG - tig0029236:11795-11814 Msa1441220:CDS 40.0%
AATTGAATTGGCACTTGGCT+TGG - tig0029236:11871-11890 Msa1441220:CDS 40.0%
! TGAGTGAGCAACGGTTTTTA+TGG - tig0029236:11897-11916 Msa1441220:CDS 40.0%
! GAGTGAGCAACGGTTTTTAT+GGG - tig0029236:11898-11917 Msa1441220:CDS 40.0%
GTTCTCTCCAAAAACCCATT+TGG + tig0029236:12004-12023 None:intergenic 40.0%
!! GGTTTTTGGAGAGAACCAAA+GGG - tig0029236:12008-12027 Msa1441220:CDS 40.0%
!! GGTTTTTGACTCATTGTGGT+TGG - tig0029236:12095-12114 Msa1441220:CDS 40.0%
AAAAGTGGCCAAACCACTAA+AGG + tig0029236:12154-12173 None:intergenic 40.0%
! AGACCAAATGTTGGTGAGAA+TGG - tig0029236:12229-12248 Msa1441220:CDS 40.0%
!! GAATGGTTTGGTTGAGAGAT+TGG - tig0029236:12246-12265 Msa1441220:CDS 40.0%
TGTCTTATGGAAGGTGAAGA+AGG - tig0029236:12289-12308 Msa1441220:CDS 40.0%
GTCTTATGGAAGGTGAAGAA+GGG - tig0029236:12290-12309 Msa1441220:CDS 40.0%
GCTAAAACTCTTGGTGAGAA+TGG - tig0029236:12355-12374 Msa1441220:CDS 40.0%
!! TCTCCAATTTAGCTCTCAAG+TGG - tig0029236:12395-12414 Msa1441220:CDS 40.0%
!!! GTTTTTTGGGCTTTTGAAGG+TGG + tig0029236:11164-11183 None:intergenic 40.0%
!!! ACGGTTTTTTGGGCTTTTGA+AGG + tig0029236:11167-11186 None:intergenic 40.0%
!! TGAAGTTTTGACGGAGAGAA+GGG + tig0029236:11307-11326 None:intergenic 40.0%
!! TTGAAGTTTTGACGGAGAGA+AGG + tig0029236:11308-11327 None:intergenic 40.0%
AGTTTCCTTGAACTTGAACC+AGG - tig0029236:11659-11678 Msa1441220:CDS 40.0%
GGAGTTACTAAAGGAAGAAC+CGG - tig0029236:11691-11710 Msa1441220:CDS 40.0%
GAGTTACTAAAGGAAGAACC+GGG - tig0029236:11692-11711 Msa1441220:CDS 40.0%
! GGGTAAAACTTAGGTTTTCC+CGG + tig0029236:11713-11732 None:intergenic 40.0%
! GGGAAAACCTAAGTTTTACC+CGG - tig0029236:11712-11731 Msa1441220:CDS 40.0%
! AAACCTAAGTTTTACCCGGT+CGG - tig0029236:11716-11735 Msa1441220:CDS 40.0%
CCTACTTCCCTGTTTACTAA+TGG + tig0029236:11743-11762 None:intergenic 40.0%
CCATTAGTAAACAGGGAAGT+AGG - tig0029236:11740-11759 Msa1441220:CDS 40.0%
AACAGGGAAGTAGGTCAAAT+TGG - tig0029236:11749-11768 Msa1441220:CDS 40.0%
CGAACTCAGAGAGTTTGAAT+TGG - tig0029236:11774-11793 Msa1441220:CDS 40.0%
GGTTAGATAATCAACCACAC+GGG - tig0029236:11795-11814 Msa1441220:CDS 40.0%
AATTGAATTGGCACTTGGCT+TGG - tig0029236:11871-11890 Msa1441220:CDS 40.0%
! TGAGTGAGCAACGGTTTTTA+TGG - tig0029236:11897-11916 Msa1441220:CDS 40.0%
! GAGTGAGCAACGGTTTTTAT+GGG - tig0029236:11898-11917 Msa1441220:CDS 40.0%
GTTCTCTCCAAAAACCCATT+TGG + tig0029236:12004-12023 None:intergenic 40.0%
!! GGTTTTTGGAGAGAACCAAA+GGG - tig0029236:12008-12027 Msa1441220:CDS 40.0%
!! GGTTTTTGACTCATTGTGGT+TGG - tig0029236:12095-12114 Msa1441220:CDS 40.0%
AAAAGTGGCCAAACCACTAA+AGG + tig0029236:12154-12173 None:intergenic 40.0%
! AGACCAAATGTTGGTGAGAA+TGG - tig0029236:12229-12248 Msa1441220:CDS 40.0%
!! GAATGGTTTGGTTGAGAGAT+TGG - tig0029236:12246-12265 Msa1441220:CDS 40.0%
TGTCTTATGGAAGGTGAAGA+AGG - tig0029236:12289-12308 Msa1441220:CDS 40.0%
GTCTTATGGAAGGTGAAGAA+GGG - tig0029236:12290-12309 Msa1441220:CDS 40.0%
GCTAAAACTCTTGGTGAGAA+TGG - tig0029236:12355-12374 Msa1441220:CDS 40.0%
!! TCTCCAATTTAGCTCTCAAG+TGG - tig0029236:12395-12414 Msa1441220:CDS 40.0%
GATGGTAGCATCACAACCAT+AGG + tig0029236:11044-11063 None:intergenic 45.0%
ACCTTCTTCATTCCCAGTGA+TGG - tig0029236:11137-11156 Msa1441220:CDS 45.0%
ACCATCACTGGGAATGAAGA+AGG + tig0029236:11141-11160 None:intergenic 45.0%
TTTGAAGGTGGACCATCACT+GGG + tig0029236:11152-11171 None:intergenic 45.0%
!! TTTTGAAGGTGGACCATCAC+TGG + tig0029236:11153-11172 None:intergenic 45.0%
GGAGATGATTGTCTCTATCC+CGG + tig0029236:11264-11283 None:intergenic 45.0%
AAGGAAAAGAGAGAGAGCCA+TGG + tig0029236:11447-11466 None:intergenic 45.0%
TAAACTCGCAGTGAACTTCC+TGG + tig0029236:11487-11506 None:intergenic 45.0%
ACTGAACCGGTGAAAATTCC+TGG - tig0029236:11515-11534 Msa1441220:CDS 45.0%
CCATGAATCGGAATACAACC+AGG + tig0029236:11536-11555 None:intergenic 45.0%
CCTGGTTGTATTCCGATTCA+TGG - tig0029236:11533-11552 Msa1441220:CDS 45.0%
TCGTTCTTCCTGTCTTGAAG+CGG + tig0029236:11575-11594 None:intergenic 45.0%
! TACCAAAGTGTCCTTCGCAA+CGG - tig0029236:11599-11618 Msa1441220:CDS 45.0%
AAGAGATACAGAGAAGCCGA+TGG - tig0029236:11623-11642 Msa1441220:CDS 45.0%
! TTGGACCTGGTTCAAGTTCA+AGG + tig0029236:11667-11686 None:intergenic 45.0%
ACTTGAACCAGGTCCAATCA+AGG - tig0029236:11670-11689 Msa1441220:CDS 45.0%
AGTAACTCCTTGATTGGACC+TGG + tig0029236:11680-11699 None:intergenic 45.0%
TGTTTACTAATGGTCCGACC+GGG + tig0029236:11733-11752 None:intergenic 45.0%
CTGTTTACTAATGGTCCGAC+CGG + tig0029236:11734-11753 None:intergenic 45.0%
GGTCGGACCATTAGTAAACA+GGG - tig0029236:11733-11752 Msa1441220:CDS 45.0%
GCTTGGAAATGAGTGAGCAA+CGG - tig0029236:11888-11907 Msa1441220:CDS 45.0%
!! GGGTTTTTGGAGAGAACCAA+AGG - tig0029236:12007-12026 Msa1441220:CDS 45.0%
!! TTTTGGAGAGAACCAAAGGG+AGG - tig0029236:12011-12030 Msa1441220:CDS 45.0%
TTTGGAGAGAACCAAAGGGA+GGG - tig0029236:12012-12031 Msa1441220:CDS 45.0%
!! GGTGGGTTTTTGACTCATTG+TGG - tig0029236:12091-12110 Msa1441220:CDS 45.0%
! TGTTAATGGGGTGCCTTTAG+TGG - tig0029236:12138-12157 Msa1441220:CDS 45.0%
!! GTTGGGTTGAGACCAAATGT+TGG - tig0029236:12220-12239 Msa1441220:CDS 45.0%
GATGCAGCTGCTAAAACTCT+TGG - tig0029236:12346-12365 Msa1441220:CDS 45.0%
GCTCCACTTGAGAGCTAAAT+TGG + tig0029236:12401-12420 None:intergenic 45.0%
GATGGTAGCATCACAACCAT+AGG + tig0029236:11044-11063 None:intergenic 45.0%
ACCTTCTTCATTCCCAGTGA+TGG - tig0029236:11137-11156 Msa1441220:CDS 45.0%
ACCATCACTGGGAATGAAGA+AGG + tig0029236:11141-11160 None:intergenic 45.0%
TTTGAAGGTGGACCATCACT+GGG + tig0029236:11152-11171 None:intergenic 45.0%
!! TTTTGAAGGTGGACCATCAC+TGG + tig0029236:11153-11172 None:intergenic 45.0%
GGAGATGATTGTCTCTATCC+CGG + tig0029236:11264-11283 None:intergenic 45.0%
AAGGAAAAGAGAGAGAGCCA+TGG + tig0029236:11447-11466 None:intergenic 45.0%
TAAACTCGCAGTGAACTTCC+TGG + tig0029236:11487-11506 None:intergenic 45.0%
ACTGAACCGGTGAAAATTCC+TGG - tig0029236:11515-11534 Msa1441220:CDS 45.0%
CCATGAATCGGAATACAACC+AGG + tig0029236:11536-11555 None:intergenic 45.0%
CCTGGTTGTATTCCGATTCA+TGG - tig0029236:11533-11552 Msa1441220:CDS 45.0%
TCGTTCTTCCTGTCTTGAAG+CGG + tig0029236:11575-11594 None:intergenic 45.0%
! TACCAAAGTGTCCTTCGCAA+CGG - tig0029236:11599-11618 Msa1441220:CDS 45.0%
AAGAGATACAGAGAAGCCGA+TGG - tig0029236:11623-11642 Msa1441220:CDS 45.0%
! TTGGACCTGGTTCAAGTTCA+AGG + tig0029236:11667-11686 None:intergenic 45.0%
ACTTGAACCAGGTCCAATCA+AGG - tig0029236:11670-11689 Msa1441220:CDS 45.0%
AGTAACTCCTTGATTGGACC+TGG + tig0029236:11680-11699 None:intergenic 45.0%
TGTTTACTAATGGTCCGACC+GGG + tig0029236:11733-11752 None:intergenic 45.0%
CTGTTTACTAATGGTCCGAC+CGG + tig0029236:11734-11753 None:intergenic 45.0%
GGTCGGACCATTAGTAAACA+GGG - tig0029236:11733-11752 Msa1441220:CDS 45.0%
GCTTGGAAATGAGTGAGCAA+CGG - tig0029236:11888-11907 Msa1441220:CDS 45.0%
!! GGGTTTTTGGAGAGAACCAA+AGG - tig0029236:12007-12026 Msa1441220:CDS 45.0%
!! TTTTGGAGAGAACCAAAGGG+AGG - tig0029236:12011-12030 Msa1441220:CDS 45.0%
TTTGGAGAGAACCAAAGGGA+GGG - tig0029236:12012-12031 Msa1441220:CDS 45.0%
!! GGTGGGTTTTTGACTCATTG+TGG - tig0029236:12091-12110 Msa1441220:CDS 45.0%
! TGTTAATGGGGTGCCTTTAG+TGG - tig0029236:12138-12157 Msa1441220:CDS 45.0%
!! GTTGGGTTGAGACCAAATGT+TGG - tig0029236:12220-12239 Msa1441220:CDS 45.0%
GATGCAGCTGCTAAAACTCT+TGG - tig0029236:12346-12365 Msa1441220:CDS 45.0%
GCTCCACTTGAGAGCTAAAT+TGG + tig0029236:12401-12420 None:intergenic 45.0%
GGTAGCATCACAACCATAGG+TGG + tig0029236:11041-11060 None:intergenic 50.0%
GTTGTGATGCTACCATCACC+AGG - tig0029236:11047-11066 Msa1441220:CDS 50.0%
ATGCTACCATCACCAGGCAT+GGG - tig0029236:11053-11072 Msa1441220:CDS 50.0%
GGTATAAGATGTCCCATGCC+TGG + tig0029236:11068-11087 None:intergenic 50.0%
CTGAGAAGGAAACTGGTGGA+AGG + tig0029236:11226-11245 None:intergenic 50.0%
AGGTCTGAGAAGGAAACTGG+TGG + tig0029236:11230-11249 None:intergenic 50.0%
GGAAGGTCTGAGAAGGAAAC+TGG + tig0029236:11233-11252 None:intergenic 50.0%
ATTGTCTCTATCCCGGAGGT+TGG + tig0029236:11257-11276 None:intergenic 50.0%
GATGATTGTCTCTATCCCGG+AGG + tig0029236:11261-11280 None:intergenic 50.0%
CTGTTGTCGTCGACCTCTTT+GGG - tig0029236:11357-11376 Msa1441220:CDS 50.0%
!! CAAAAGCGTCTGTCCCAAAG+AGG + tig0029236:11373-11392 None:intergenic 50.0%
CTTCTACCCTTCAACTGCCA+TGG - tig0029236:11427-11446 Msa1441220:CDS 50.0%
AGAGAGCCATGGCAGTTGAA+GGG + tig0029236:11436-11455 None:intergenic 50.0%
TACTAGACCCGCTTCAAGAC+AGG - tig0029236:11564-11583 Msa1441220:CDS 50.0%
CGTTCTTCCTGTCTTGAAGC+GGG + tig0029236:11574-11593 None:intergenic 50.0%
! ACCAAAGTGTCCTTCGCAAC+GGG - tig0029236:11600-11619 Msa1441220:CDS 50.0%
TGTATCTCTTCCCGTTGCGA+AGG + tig0029236:11613-11632 None:intergenic 50.0%
CGGTCGGACCATTAGTAAAC+AGG - tig0029236:11732-11751 Msa1441220:CDS 50.0%
ACAAACAGAACACTCCCGTG+TGG + tig0029236:11812-11831 None:intergenic 50.0%
TTGGAGAGAACCAAAGGGAG+GGG - tig0029236:12013-12032 Msa1441220:CDS 50.0%
! GGGTCTTGTCGTGTCATCTT+GGG - tig0029236:12033-12052 Msa1441220:CDS 50.0%
AAACCCACCAGTTGAGCCAT+GGG + tig0029236:12080-12099 None:intergenic 50.0%
AAAACCCACCAGTTGAGCCA+TGG + tig0029236:12081-12100 None:intergenic 50.0%
! ATGGGGTGCCTTTAGTGGTT+TGG - tig0029236:12143-12162 Msa1441220:CDS 50.0%
GGTAGCATCACAACCATAGG+TGG + tig0029236:11041-11060 None:intergenic 50.0%
GTTGTGATGCTACCATCACC+AGG - tig0029236:11047-11066 Msa1441220:CDS 50.0%
ATGCTACCATCACCAGGCAT+GGG - tig0029236:11053-11072 Msa1441220:CDS 50.0%
GGTATAAGATGTCCCATGCC+TGG + tig0029236:11068-11087 None:intergenic 50.0%
CTGAGAAGGAAACTGGTGGA+AGG + tig0029236:11226-11245 None:intergenic 50.0%
AGGTCTGAGAAGGAAACTGG+TGG + tig0029236:11230-11249 None:intergenic 50.0%
GGAAGGTCTGAGAAGGAAAC+TGG + tig0029236:11233-11252 None:intergenic 50.0%
ATTGTCTCTATCCCGGAGGT+TGG + tig0029236:11257-11276 None:intergenic 50.0%
GATGATTGTCTCTATCCCGG+AGG + tig0029236:11261-11280 None:intergenic 50.0%
CTGTTGTCGTCGACCTCTTT+GGG - tig0029236:11357-11376 Msa1441220:CDS 50.0%
!! CAAAAGCGTCTGTCCCAAAG+AGG + tig0029236:11373-11392 None:intergenic 50.0%
CTTCTACCCTTCAACTGCCA+TGG - tig0029236:11427-11446 Msa1441220:CDS 50.0%
AGAGAGCCATGGCAGTTGAA+GGG + tig0029236:11436-11455 None:intergenic 50.0%
TACTAGACCCGCTTCAAGAC+AGG - tig0029236:11564-11583 Msa1441220:CDS 50.0%
CGTTCTTCCTGTCTTGAAGC+GGG + tig0029236:11574-11593 None:intergenic 50.0%
! ACCAAAGTGTCCTTCGCAAC+GGG - tig0029236:11600-11619 Msa1441220:CDS 50.0%
TGTATCTCTTCCCGTTGCGA+AGG + tig0029236:11613-11632 None:intergenic 50.0%
CGGTCGGACCATTAGTAAAC+AGG - tig0029236:11732-11751 Msa1441220:CDS 50.0%
ACAAACAGAACACTCCCGTG+TGG + tig0029236:11812-11831 None:intergenic 50.0%
TTGGAGAGAACCAAAGGGAG+GGG - tig0029236:12013-12032 Msa1441220:CDS 50.0%
! GGGTCTTGTCGTGTCATCTT+GGG - tig0029236:12033-12052 Msa1441220:CDS 50.0%
AAACCCACCAGTTGAGCCAT+GGG + tig0029236:12080-12099 None:intergenic 50.0%
AAAACCCACCAGTTGAGCCA+TGG + tig0029236:12081-12100 None:intergenic 50.0%
! ATGGGGTGCCTTTAGTGGTT+TGG - tig0029236:12143-12162 Msa1441220:CDS 50.0%
GATGCTACCATCACCAGGCA+TGG - tig0029236:11052-11071 Msa1441220:CDS 55.0%
AGATGTCCCATGCCTGGTGA+TGG + tig0029236:11062-11081 None:intergenic 55.0%
!! GGTTGGTGGAAGGTCTGAGA+AGG + tig0029236:11240-11259 None:intergenic 55.0%
TCAGACCTTCCACCAACCTC+CGG - tig0029236:11242-11261 Msa1441220:CDS 55.0%
GAGAGAACGGAGGACAGTGA+GGG + tig0029236:11285-11304 None:intergenic 55.0%
GACGGAGAGAAGGGAGAGAA+CGG + tig0029236:11298-11317 None:intergenic 55.0%
GCTGTTGTCGTCGACCTCTT+TGG - tig0029236:11356-11375 Msa1441220:CDS 55.0%
! ACAGACGCTTTTGACGTCGC+TGG - tig0029236:11380-11399 Msa1441220:CDS 55.0%
GAGAGAGCCATGGCAGTTGA+AGG + tig0029236:11437-11456 None:intergenic 55.0%
GGTCAAGGCGAGGAAGGTAA+AGG + tig0029236:11466-11485 None:intergenic 55.0%
TTACCTTCCTCGCCTTGACC+AGG - tig0029236:11466-11485 Msa1441220:CDS 55.0%
TGAACTTCCTGGTCAAGGCG+AGG + tig0029236:11476-11495 None:intergenic 55.0%
CGCAGTGAACTTCCTGGTCA+AGG + tig0029236:11481-11500 None:intergenic 55.0%
TCCCGTTGCGAAGGACACTT+TGG + tig0029236:11604-11623 None:intergenic 55.0%
GGTCCGACCGGGTAAAACTT+AGG + tig0029236:11722-11741 None:intergenic 55.0%
! GGGGTCTTGTCGTGTCATCT+TGG - tig0029236:12032-12051 Msa1441220:CDS 55.0%
GGCCAAAACCTGTGGTTGTG+GGG + tig0029236:12059-12078 None:intergenic 55.0%
GGGCCAAAACCTGTGGTTGT+GGG + tig0029236:12060-12079 None:intergenic 55.0%
TGGGCCAAAACCTGTGGTTG+TGG + tig0029236:12061-12080 None:intergenic 55.0%
!! CAACCACAGGTTTTGGCCCA+TGG - tig0029236:12061-12080 Msa1441220:CDS 55.0%
!! GTTTTGGCCCATGGCTCAAC+TGG - tig0029236:12070-12089 Msa1441220:CDS 55.0%
GATGCTACCATCACCAGGCA+TGG - tig0029236:11052-11071 Msa1441220:CDS 55.0%
AGATGTCCCATGCCTGGTGA+TGG + tig0029236:11062-11081 None:intergenic 55.0%
!! GGTTGGTGGAAGGTCTGAGA+AGG + tig0029236:11240-11259 None:intergenic 55.0%
TCAGACCTTCCACCAACCTC+CGG - tig0029236:11242-11261 Msa1441220:CDS 55.0%
GAGAGAACGGAGGACAGTGA+GGG + tig0029236:11285-11304 None:intergenic 55.0%
GACGGAGAGAAGGGAGAGAA+CGG + tig0029236:11298-11317 None:intergenic 55.0%
GCTGTTGTCGTCGACCTCTT+TGG - tig0029236:11356-11375 Msa1441220:CDS 55.0%
! ACAGACGCTTTTGACGTCGC+TGG - tig0029236:11380-11399 Msa1441220:CDS 55.0%
GAGAGAGCCATGGCAGTTGA+AGG + tig0029236:11437-11456 None:intergenic 55.0%
GGTCAAGGCGAGGAAGGTAA+AGG + tig0029236:11466-11485 None:intergenic 55.0%
TTACCTTCCTCGCCTTGACC+AGG - tig0029236:11466-11485 Msa1441220:CDS 55.0%
TGAACTTCCTGGTCAAGGCG+AGG + tig0029236:11476-11495 None:intergenic 55.0%
CGCAGTGAACTTCCTGGTCA+AGG + tig0029236:11481-11500 None:intergenic 55.0%
TCCCGTTGCGAAGGACACTT+TGG + tig0029236:11604-11623 None:intergenic 55.0%
GGTCCGACCGGGTAAAACTT+AGG + tig0029236:11722-11741 None:intergenic 55.0%
! GGGGTCTTGTCGTGTCATCT+TGG - tig0029236:12032-12051 Msa1441220:CDS 55.0%
GGCCAAAACCTGTGGTTGTG+GGG + tig0029236:12059-12078 None:intergenic 55.0%
GGGCCAAAACCTGTGGTTGT+GGG + tig0029236:12060-12079 None:intergenic 55.0%
TGGGCCAAAACCTGTGGTTG+TGG + tig0029236:12061-12080 None:intergenic 55.0%
!! CAACCACAGGTTTTGGCCCA+TGG - tig0029236:12061-12080 Msa1441220:CDS 55.0%
!! GTTTTGGCCCATGGCTCAAC+TGG - tig0029236:12070-12089 Msa1441220:CDS 55.0%
CAGACCTTCCACCAACCTCC+GGG - tig0029236:11243-11262 Msa1441220:CDS 60.0%
!! CTATCCCGGAGGTTGGTGGA+AGG + tig0029236:11250-11269 None:intergenic 60.0%
GTCTCTATCCCGGAGGTTGG+TGG + tig0029236:11254-11273 None:intergenic 60.0%
GGAGAGAACGGAGGACAGTG+AGG + tig0029236:11286-11305 None:intergenic 60.0%
GGAGAGAAGGGAGAGAACGG+AGG + tig0029236:11295-11314 None:intergenic 60.0%
CTTCCTGGTCAAGGCGAGGA+AGG + tig0029236:11472-11491 None:intergenic 60.0%
CACGACAAGACCCCTCCCTT+TGG + tig0029236:12026-12045 None:intergenic 60.0%
ATCTTGGGCCCCACAACCAC+AGG - tig0029236:12048-12067 Msa1441220:CDS 60.0%
! GGCCCCACAACCACAGGTTT+TGG - tig0029236:12054-12073 Msa1441220:CDS 60.0%
GAGCCATGGGCCAAAACCTG+TGG + tig0029236:12067-12086 None:intergenic 60.0%
TTGGCCCATGGCTCAACTGG+TGG - tig0029236:12073-12092 Msa1441220:CDS 60.0%
TGGCCCATGGCTCAACTGGT+GGG - tig0029236:12074-12093 Msa1441220:CDS 60.0%
CAGACCTTCCACCAACCTCC+GGG - tig0029236:11243-11262 Msa1441220:CDS 60.0%
!! CTATCCCGGAGGTTGGTGGA+AGG + tig0029236:11250-11269 None:intergenic 60.0%
GTCTCTATCCCGGAGGTTGG+TGG + tig0029236:11254-11273 None:intergenic 60.0%
GGAGAGAACGGAGGACAGTG+AGG + tig0029236:11286-11305 None:intergenic 60.0%
GGAGAGAAGGGAGAGAACGG+AGG + tig0029236:11295-11314 None:intergenic 60.0%
CTTCCTGGTCAAGGCGAGGA+AGG + tig0029236:11472-11491 None:intergenic 60.0%
CACGACAAGACCCCTCCCTT+TGG + tig0029236:12026-12045 None:intergenic 60.0%
ATCTTGGGCCCCACAACCAC+AGG - tig0029236:12048-12067 Msa1441220:CDS 60.0%
! GGCCCCACAACCACAGGTTT+TGG - tig0029236:12054-12073 Msa1441220:CDS 60.0%
GAGCCATGGGCCAAAACCTG+TGG + tig0029236:12067-12086 None:intergenic 60.0%
TTGGCCCATGGCTCAACTGG+TGG - tig0029236:12073-12092 Msa1441220:CDS 60.0%
TGGCCCATGGCTCAACTGGT+GGG - tig0029236:12074-12093 Msa1441220:CDS 60.0%
Chromosome Type Strat End Strand Name
tig0029236 gene 11005 12444 11005 ID=Msa1441220;Name=Msa1441220
tig0029236 mRNA 11005 12444 11005 ID=Msa1441220-mRNA-1;Parent=Msa1441220;Name=Msa1441220-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|479
tig0029236 exon 11005 12444 11005 ID=Msa1441220-mRNA-1:exon:12703;Parent=Msa1441220-mRNA-1
tig0029236 CDS 11005 12444 11005 ID=Msa1441220-mRNA-1:cds;Parent=Msa1441220-mRNA-1
Gene Sequence

>Msa1441220

ATGGAAATCTCAAAACAAGAACCATTATCAAAACCACCTATGGTTGTGATGCTACCATCACCAGGCATGGGACATCTTATACCAATGATTGAATTCGCCAAAAGAATTATTCTTCATCAAAATCTTCAAATCACCTTCTTCATTCCCAGTGATGGTCCACCTTCAAAAGCCCAAAAAACCGTTCTTCAATCTCTTCCAAAGTCCATTTCACATACTTTCCTTCCACCAGTTTCCTTCTCAGACCTTCCACCAACCTCCGGGATAGAGACAATCATCTCCCTCACTGTCCTCCGTTCTCTCCCTTCTCTCCGTCAAAACTTCAACACTCTCTCTGACACTCATACTATCACTGCTGTTGTCGTCGACCTCTTTGGGACAGACGCTTTTGACGTCGCTGGAGAATTCAACGTCCCTAAATATGTCTTCTACCCTTCAACTGCCATGGCTCTCTCTCTTTTCCTTTACCTTCCTCGCCTTGACCAGGAAGTTCACTGCGAGTTTAGAGAATTGACTGAACCGGTGAAAATTCCTGGTTGTATTCCGATTCATGGTAAATATTTACTAGACCCGCTTCAAGACAGGAAGAACGATGCTTACCAAAGTGTCCTTCGCAACGGGAAGAGATACAGAGAAGCCGATGGACTTATAGAGAACAGTTTCCTTGAACTTGAACCAGGTCCAATCAAGGAGTTACTAAAGGAAGAACCGGGAAAACCTAAGTTTTACCCGGTCGGACCATTAGTAAACAGGGAAGTAGGTCAAATTGGACCGAACTCAGAGAGTTTGAATTGGTTAGATAATCAACCACACGGGAGTGTTCTGTTTGTTTCTTTTGGAAGTGGTGGGACCCTCTCTAGTAAACAGATAATTGAATTGGCACTTGGCTTGGAAATGAGTGAGCAACGGTTTTTATGGGTTGTTAGAAGTCCAAATGATAAAGTTGCTAATGCTTCTTACTTCAGTGCTGAAACACATTCTGATCCTTTTGATTTTCTACCAAATGGGTTTTTGGAGAGAACCAAAGGGAGGGGTCTTGTCGTGTCATCTTGGGCCCCACAACCACAGGTTTTGGCCCATGGCTCAACTGGTGGGTTTTTGACTCATTGTGGTTGGAATTCAGTTCTTGAGAGTGTTGTTAATGGGGTGCCTTTAGTGGTTTGGCCACTTTTTGCAGAGCAAAAGATGAATGCTGTTATTTTAACTGAGGATGTTAAGGTTGGGTTGAGACCAAATGTTGGTGAGAATGGTTTGGTTGAGAGATTGGAAATTGCTAGTGTTGTTAAGTGTCTTATGGAAGGTGAAGAAGGGAAAAAGCTTCGTTATCAAATGAAGGATCTTAAGGATGCAGCTGCTAAAACTCTTGGTGAGAATGGAACTTCCACAAACCATATCTCCAATTTAGCTCTCAAGTGGAGCAACAAATCCACTGTAATAAATTAA

Protein sequence

>Msa1441220

MEISKQEPLSKPPMVVMLPSPGMGHLIPMIEFAKRIILHQNLQITFFIPSDGPPSKAQKTVLQSLPKSISHTFLPPVSFSDLPPTSGIETIISLTVLRSLPSLRQNFNTLSDTHTITAVVVDLFGTDAFDVAGEFNVPKYVFYPSTAMALSLFLYLPRLDQEVHCEFRELTEPVKIPGCIPIHGKYLLDPLQDRKNDAYQSVLRNGKRYREADGLIENSFLELEPGPIKELLKEEPGKPKFYPVGPLVNREVGQIGPNSESLNWLDNQPHGSVLFVSFGSGGTLSSKQIIELALGLEMSEQRFLWVVRSPNDKVANASYFSAETHSDPFDFLPNGFLERTKGRGLVVSSWAPQPQVLAHGSTGGFLTHCGWNSVLESVVNGVPLVVWPLFAEQKMNAVILTEDVKVGLRPNVGENGLVERLEIASVVKCLMEGEEGKKLRYQMKDLKDAAAKTLGENGTSTNHISNLALKWSNKSTVIN*