AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0350070

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0350070 MtrunA17_Chr3g0083841 91.525 118 10 0 1 118 1 118 9.71e-72 226
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0350070 AT3G54500.7 40.157 127 71 2 1 126 1 123 4.77e-19 82.4
Msa0350070 AT3G54500.5 40.157 127 71 2 1 126 1 123 4.77e-19 82.4
Msa0350070 AT3G54500.4 43.902 123 64 3 1 122 1 119 3.20e-18 79.7
Msa0350070 AT3G54500.3 40.650 123 68 2 1 122 1 119 3.93e-18 79.7
Msa0350070 AT3G54500.1 42.982 114 60 2 1 113 1 110 8.09e-18 78.6

Find 206 sgRNAs with CRISPR-Local

Find 655 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCATAATCCTAGACTATTTA+TGG 0.053603 3_1:-14611672 None:intergenic
CTTAACTACGAAAAGATTTC+TGG 0.141989 3_1:+14607772 Msa0350070:three_prime_UTR
TTCAGCTTGCTAATATAATA+TGG 0.167194 3_1:+14606337 Msa0350070:intron
GTCAATACTTGGCATGATTT+TGG 0.190706 3_1:+14611536 Msa0350070:three_prime_UTR
ATGATGTTCTGATATGTTTC+AGG 0.210886 3_1:-14608931 None:intergenic
CCACAGCCTATGAAATTAAT+AGG 0.214453 3_1:+14611627 Msa0350070:three_prime_UTR
TCATCTCCCTCTTCAATTCT+TGG 0.243129 3_1:+14608886 Msa0350070:three_prime_UTR
AGCAATGATGACCCTATATT+TGG 0.245263 3_1:+14607580 Msa0350070:intron
CATAGACCTGTGGAGTTAAC+AGG 0.252015 3_1:+14610545 Msa0350070:three_prime_UTR
GAAGGATAACCATGATTTAA+TGG 0.253110 3_1:-14611922 None:intergenic
CAAGTCCCACTGATGCTTTA+AGG 0.257456 3_1:+14607686 Msa0350070:three_prime_UTR
TGTCAAACATTTATACAATT+AGG 0.260480 3_1:-14606852 None:intergenic
CTACGTCTACAGTTTGATTC+TGG 0.271489 3_1:+14602832 Msa0350070:five_prime_UTR
TTTGCATTAGGTATCAAAAT+TGG 0.273201 3_1:+14611882 Msa0350070:three_prime_UTR
AGGCATCAGCATGTGCTCTC+TGG 0.298254 3_1:+14609033 Msa0350070:three_prime_UTR
AACCATATTGTGCAGGCTTC+AGG 0.302174 3_1:+14609386 Msa0350070:three_prime_UTR
GGGTGACTGTCATTCTTATA+GGG 0.308386 3_1:+14611466 Msa0350070:intron
GTGATAAAATTGCTAATTAC+TGG 0.313478 3_1:+14606682 Msa0350070:CDS
TTAGTTTAAATTAGTTTGAT+AGG 0.317890 3_1:-14602509 None:intergenic
AGGGTGACTGTCATTCTTAT+AGG 0.325659 3_1:+14611465 Msa0350070:intron
TTTAGCCCTATTAATTTCAT+AGG 0.326093 3_1:-14611633 None:intergenic
GAATCATCTTGTTCAATTAG+AGG 0.333648 3_1:-14609321 None:intergenic
AGACTTGCATGGCCAAATAT+AGG 0.334235 3_1:-14607592 None:intergenic
CCATAAATAGTCTAGGATTA+TGG 0.353557 3_1:+14611672 Msa0350070:three_prime_UTR
AGTTTCAGTCAGGAAATCTT+AGG 0.358237 3_1:+14609013 Msa0350070:three_prime_UTR
TCAGGTCCTAGGAGTTGATT+TGG 0.365895 3_1:-14608913 None:intergenic
TTATGCATTATTTGCGAGAT+TGG 0.369088 3_1:-14602454 None:intergenic
GAGGAGTATGGTCAAGAGTT+TGG 0.374183 3_1:+14611770 Msa0350070:three_prime_UTR
ACATTGGGAAATGAGGGTTT+GGG 0.374262 3_1:-14602375 None:intergenic
ACAAGAGGGGAAAGATTTGC+AGG 0.375758 3_1:+14608786 Msa0350070:three_prime_UTR
TACATTGGGAAATGAGGGTT+TGG 0.378685 3_1:-14602376 None:intergenic
AGGAAATTATTCTGACAAAC+TGG 0.382761 3_1:+14610565 Msa0350070:three_prime_UTR
CATTGAGAGGCTTCAAGCTC+CGG 0.383942 3_1:-14610800 None:intergenic
ATCCTGAAGCCTGCACAATA+TGG 0.385534 3_1:-14609388 None:intergenic
TTCGTCTCTGTTTCAACATC+AGG 0.385600 3_1:-14610488 None:intergenic
CATCTCCCTCTTCAATTCTT+GGG 0.389661 3_1:+14608887 Msa0350070:three_prime_UTR
ATCAACAACTTTCTCACATT+GGG 0.390601 3_1:+14610684 Msa0350070:three_prime_UTR
AAGGAATAGATCAGGGCCTT+TGG 0.396684 3_1:+14607705 Msa0350070:three_prime_UTR
TCAGCTTGCTAATATAATAT+GGG 0.399569 3_1:+14606338 Msa0350070:intron
TGCCGATGAAGGTAAAGAAC+AGG 0.402038 3_1:+14606919 Msa0350070:three_prime_UTR
AAACAAGAAAGAAGTGAATC+AGG 0.402238 3_1:+14606422 Msa0350070:CDS
AGTTCGAACCTTAACAATAA+TGG 0.402335 3_1:+14606519 Msa0350070:CDS
AATGAAAGCCGTGAGGAGTA+TGG 0.402841 3_1:+14611758 Msa0350070:three_prime_UTR
TCAACTATTGACAGTCTTCA+AGG 0.407629 3_1:-14611724 None:intergenic
GAGGCGGCGGCAGCAAATGC+AGG 0.413237 3_1:+14609152 Msa0350070:three_prime_UTR
CGAGATTGGAGGGGAAGAGA+GGG 0.415579 3_1:-14602440 None:intergenic
TTTGGAATTCTCCACGTGTA+AGG 0.417982 3_1:+14602557 Msa0350070:five_prime_UTR
AACATTTAGCCATTAAATCA+TGG 0.418684 3_1:+14611913 Msa0350070:three_prime_UTR
TGTGTTAGCATTGGCATAGC+AGG 0.424322 3_1:-14608991 None:intergenic
GTCGAGGATCCCTTTGCATT+AGG 0.425641 3_1:+14611870 Msa0350070:three_prime_UTR
GACTTGCATGGCCAAATATA+GGG 0.428786 3_1:-14607591 None:intergenic
TCAAAATCAGCTTTCGTCTC+GGG 0.429670 3_1:-14606480 None:intergenic
CAGGTCTATGAAAGAGTAAA+CGG 0.431253 3_1:-14610532 None:intergenic
GTTGTCCTCCATTATTGTTA+AGG 0.431483 3_1:-14606527 None:intergenic
TAAAACGAAGGTGCCACATA+TGG 0.437704 3_1:-14608958 None:intergenic
CTTAGCAAACTCGGTACATC+AGG 0.438169 3_1:+14606657 Msa0350070:CDS
TTAAGATCTTCACTTGCCTC+TGG 0.438774 3_1:-14606399 None:intergenic
AAGAAAGCAGTAGCCAAAAC+AGG 0.439156 3_1:+14609662 Msa0350070:three_prime_UTR
TCCTGAGGAGTCATAGTTTG+AGG 0.439185 3_1:-14609114 None:intergenic
TGAAGACTGTCAATAGTTGA+TGG 0.440651 3_1:+14611727 Msa0350070:three_prime_UTR
CTAGAATGACTTTGAATTTG+TGG 0.441648 3_1:-14609258 None:intergenic
ATAAAATACATTGGGAAATG+AGG 0.443366 3_1:-14602382 None:intergenic
ACCCTGTTCTTTACCTTCAT+CGG 0.444276 3_1:-14606921 None:intergenic
TCAGAAACAACAGCAAGTAC+TGG 0.445349 3_1:+14609188 Msa0350070:three_prime_UTR
GGCATCAGCATGTGCTCTCT+GGG 0.448646 3_1:+14609034 Msa0350070:three_prime_UTR
TTGCATTTCAAGTCAATACT+TGG 0.450375 3_1:+14611525 Msa0350070:three_prime_UTR
ATCAAAATCAGCTTTCGTCT+CGG 0.454688 3_1:-14606481 None:intergenic
ACCTGCTGCTCGTGACCAAT+AGG 0.454851 3_1:-14607868 None:intergenic
GATGCTTTAAGGAATAGATC+AGG 0.456030 3_1:+14607697 Msa0350070:three_prime_UTR
CACAGCCTATGAAATTAATA+GGG 0.457054 3_1:+14611628 Msa0350070:three_prime_UTR
AAGTAATCTAAAATCTTAGA+AGG 0.460080 3_1:-14611940 None:intergenic
GCATCAGAGATAGCTTGTTC+CGG 0.460936 3_1:+14609548 Msa0350070:three_prime_UTR
GCGAGATTGGAGGGGAAGAG+AGG 0.465919 3_1:-14602441 None:intergenic
CTCTGAGCTTGTGCTGAATC+CGG 0.465928 3_1:+14602792 Msa0350070:five_prime_UTR
CCTATTAATTTCATAGGCTG+TGG 0.465987 3_1:-14611627 None:intergenic
CTTAAAGCATCAGTGGGACT+TGG 0.466899 3_1:-14607685 None:intergenic
TAATTTCATAGGCTGTGGGC+GGG 0.467199 3_1:-14611622 None:intergenic
GTTTACTAGTGCAAGGAACT+TGG 0.467995 3_1:-14609215 None:intergenic
TCTTAGTCTGATCCATAGGT+TGG 0.470108 3_1:-14610736 None:intergenic
TGGAAGAAATAAAATACATT+GGG 0.471104 3_1:-14602390 None:intergenic
TTTACCTGAAAATCCGATCA+AGG 0.472813 3_1:-14606988 None:intergenic
CAGAGATAGCTTGTTCCGGC+TGG 0.473135 3_1:+14609552 Msa0350070:three_prime_UTR
CAGTGCAGCTAAAATTGATC+AGG 0.475398 3_1:+14606596 Msa0350070:CDS
TAAAATACATTGGGAAATGA+GGG 0.477019 3_1:-14602381 None:intergenic
TGTTTCAACATCAGGCATCC+TGG 0.477705 3_1:-14610480 None:intergenic
TAGAATGACTTTGAATTTGT+GGG 0.479013 3_1:-14609257 None:intergenic
AACATGATACCAAGATTCAA+TGG 0.479741 3_1:-14612005 None:intergenic
ACGGGCGACAGTTCGATCAA+TGG 0.480071 3_1:-14610513 None:intergenic
CATTGGGAAATGAGGGTTTG+GGG 0.480340 3_1:-14602374 None:intergenic
TCTTCACTTGCCTCTGGAAA+CGG 0.482423 3_1:-14606393 None:intergenic
TTGAAGAAACCATATTGTGC+AGG 0.486319 3_1:+14609379 Msa0350070:three_prime_UTR
AACATTTATACAATTAGGAA+TGG 0.486458 3_1:-14606847 None:intergenic
GCCTATTGGTCACGAGCAGC+AGG 0.486485 3_1:+14607867 Msa0350070:three_prime_UTR
GCATTATTTGCGAGATTGGA+GGG 0.486496 3_1:-14602450 None:intergenic
CTGTTCTTAGTCTGATCCAT+AGG 0.489070 3_1:-14610740 None:intergenic
TTATTAAGCTTACACACAGC+TGG 0.490921 3_1:-14606447 None:intergenic
TGCATTATTTGCGAGATTGG+AGG 0.498147 3_1:-14602451 None:intergenic
TTGATAATTCTGATGACCTC+TGG 0.501202 3_1:+14607614 Msa0350070:three_prime_UTR
ATGGAAGAAATAAAATACAT+TGG 0.501547 3_1:-14602391 None:intergenic
AATCAACAACTTTCTCACAT+TGG 0.505289 3_1:+14610683 Msa0350070:three_prime_UTR
TCTGATATGTTTCAGGTCCT+AGG 0.507149 3_1:-14608924 None:intergenic
GGGTGGCATATTTGAGCGAC+GGG 0.507311 3_1:-14609237 None:intergenic
TGCAAAATCGACAAAGAAAA+CGG 0.507791 3_1:-14602614 None:intergenic
GCGTTGCACTTTGTGCCAGC+CGG 0.508304 3_1:-14609567 None:intergenic
ATATGGGATGAGGGAGGTGA+GGG 0.508521 3_1:+14606354 Msa0350070:CDS
TGCTAATATAATATGGGATG+AGG 0.509213 3_1:+14606344 Msa0350070:CDS
ATTCAAAGTCATTCTAGTGA+TGG 0.509606 3_1:+14609264 Msa0350070:three_prime_UTR
TAATTTCCTGTTAACTCCAC+AGG 0.509907 3_1:-14610551 None:intergenic
AGATTGGAGGGGAAGAGAGG+GGG 0.519055 3_1:-14602438 None:intergenic
TGAATGTAACCATTGAATCT+TGG 0.522300 3_1:+14611996 Msa0350070:three_prime_UTR
GGAGATAGAAGTAAGCCTAT+TGG 0.522652 3_1:+14607853 Msa0350070:three_prime_UTR
GAACATCTTTCTTCATTGAG+AGG 0.523735 3_1:-14610813 None:intergenic
TTCAAAGTCATTCTAGTGAT+GGG 0.526023 3_1:+14609265 Msa0350070:three_prime_UTR
CTTTAATCCATAAATAGTCT+AGG 0.527262 3_1:+14611665 Msa0350070:three_prime_UTR
CAGAAACAACAGCAAGTACT+GGG 0.527304 3_1:+14609189 Msa0350070:three_prime_UTR
GCCTCAAACTATGACTCCTC+AGG 0.528024 3_1:+14609113 Msa0350070:three_prime_UTR
GAGAAAGAGAAAGAATAATA+CGG 0.528553 3_1:-14602703 None:intergenic
TGAGAGGCTTCAAGCTCCGG+TGG 0.529498 3_1:-14610797 None:intergenic
AATTTCATAGGCTGTGGGCG+GGG 0.530106 3_1:-14611621 None:intergenic
ATGCTAACACAGTTTCAGTC+AGG 0.532527 3_1:+14609003 Msa0350070:three_prime_UTR
AATGGAGGACAACTCGCCTC+AGG 0.533027 3_1:+14606537 Msa0350070:CDS
ACACACAACCGCTGATAATG+TGG 0.533964 3_1:+14607822 Msa0350070:three_prime_UTR
TGTTCTTCTTTGATTTCCAA+AGG 0.534602 3_1:-14607721 None:intergenic
ACAGAAGAGACCACACAGAA+TGG 0.537046 3_1:+14606872 Msa0350070:three_prime_UTR
CTCCTCTTGTAAGCACCTCA+CGG 0.538906 3_1:-14610648 None:intergenic
CGAGGTGAACTTAGCAAACT+CGG 0.541278 3_1:+14606648 Msa0350070:CDS
GTGGGACTTGGTGTGTTCAA+TGG 0.542667 3_1:-14607673 None:intergenic
GAGATTGGAGGGGAAGAGAG+GGG 0.545145 3_1:-14602439 None:intergenic
AAGAGACCACACAGAATGGA+AGG 0.545204 3_1:+14606876 Msa0350070:three_prime_UTR
GGGCAACCAAATCAACTCCT+AGG 0.545576 3_1:+14608907 Msa0350070:three_prime_UTR
AGGTCTATGAAAGAGTAAAC+GGG 0.548734 3_1:-14610531 None:intergenic
AATATGGGATGAGGGAGGTG+AGG 0.553046 3_1:+14606353 Msa0350070:CDS
TCTGGGTATGAAACATCTGC+TGG 0.554617 3_1:+14609051 Msa0350070:three_prime_UTR
TCCTCTTGTAAGCACCTCAC+GGG 0.556291 3_1:-14610647 None:intergenic
TGGGTGGCATATTTGAGCGA+CGG 0.557181 3_1:-14609238 None:intergenic
GGAGTCGCACATTTCAACTA+AGG 0.558889 3_1:+14610586 Msa0350070:three_prime_UTR
CTATTAATTTCATAGGCTGT+GGG 0.559216 3_1:-14611626 None:intergenic
ACCTCACGGGAAAGTTCACT+TGG 0.559508 3_1:-14610634 None:intergenic
TCCCGTGAGGTGCTTACAAG+AGG 0.560420 3_1:+14610646 Msa0350070:three_prime_UTR
TACTAGTGCAAGGAACTTGG+TGG 0.564162 3_1:-14609212 None:intergenic
ATAGGTTGGACCTCAAAAGA+TGG 0.564515 3_1:-14610722 None:intergenic
GATTATGACTGGGCTAACAT+AGG 0.566174 3_1:+14606953 Msa0350070:three_prime_UTR
ACAACTCGCCTCAGGATATG+TGG 0.569743 3_1:+14606545 Msa0350070:CDS
GACTGAAACTGTGTTAGCAT+TGG 0.570733 3_1:-14609000 None:intergenic
GCTGATAATGTGGAATGTGC+TGG 0.572272 3_1:+14607832 Msa0350070:three_prime_UTR
TTAATTTCATAGGCTGTGGG+CGG 0.572409 3_1:-14611623 None:intergenic
TTGGTCTTCTTCAGCAACAT+CGG 0.578822 3_1:+14608822 Msa0350070:three_prime_UTR
GAACATCATAAATCCATATG+TGG 0.579709 3_1:+14608945 Msa0350070:three_prime_UTR
AGTCCTTTGAAAAGTTATGC+GGG 0.588913 3_1:+14609081 Msa0350070:three_prime_UTR
CATTATTTGCGAGATTGGAG+GGG 0.589152 3_1:-14602449 None:intergenic
GCTTCAGGATGTTATATCAA+AGG 0.593187 3_1:+14609401 Msa0350070:three_prime_UTR
TTTACTCTTTCATAGACCTG+TGG 0.593278 3_1:+14610535 Msa0350070:three_prime_UTR
CAGAATTATCAAGACTTGCA+TGG 0.593394 3_1:-14607603 None:intergenic
GCTAATATAATATGGGATGA+GGG 0.595943 3_1:+14606345 Msa0350070:CDS
AAAGTCAAAGATAAAACAAG+AGG 0.596219 3_1:+14608771 Msa0350070:three_prime_UTR
ATGTAAGTAAACTGTGAACA+TGG 0.597596 3_1:+14611821 Msa0350070:three_prime_UTR
TGGTATCACACAGATATGCC+AGG 0.598969 3_1:+14610462 Msa0350070:intron
TGGTTGCCCAAGAATTGAAG+AGG 0.600589 3_1:-14608893 None:intergenic
TCTATTCCTTAAAGCATCAG+TGG 0.602291 3_1:-14607692 None:intergenic
AACGGTAACGGAGTTTCTAG+AGG 0.605993 3_1:-14602596 None:intergenic
ATTGGGAAATGAGGGTTTGG+GGG 0.607491 3_1:-14602373 None:intergenic
GAGTCCTTTGAAAAGTTATG+CGG 0.609075 3_1:+14609080 Msa0350070:three_prime_UTR
GGTGACTGTCATTCTTATAG+GGG 0.610528 3_1:+14611467 Msa0350070:three_prime_UTR
AGCATCCCTTCCATTCTGTG+TGG 0.615267 3_1:-14606882 None:intergenic
GTGTTAGCATTGGCATAGCA+GGG 0.616825 3_1:-14608990 None:intergenic
AAGTCAAAGATAAAACAAGA+GGG 0.616841 3_1:+14608772 Msa0350070:three_prime_UTR
ATGCTTTAAGGAATAGATCA+GGG 0.618514 3_1:+14607698 Msa0350070:three_prime_UTR
GGTTGCCCAAGAATTGAAGA+GGG 0.618924 3_1:-14608892 None:intergenic
AGAATTAGCTCAATCATCGC+CGG 0.619218 3_1:-14602811 None:intergenic
TCATATTGTGCCGTTTCCAG+AGG 0.620272 3_1:+14606383 Msa0350070:CDS
ACTCTTGACCATACTCCTCA+CGG 0.621750 3_1:-14611766 None:intergenic
AGCAAACTCGGTACATCAGG+AGG 0.624925 3_1:+14606660 Msa0350070:CDS
AAACTGTGAACATGGATGAC+GGG 0.625718 3_1:+14611829 Msa0350070:three_prime_UTR
CTATTCCTTAAAGCATCAGT+GGG 0.628176 3_1:-14607691 None:intergenic
GCGACGGGTTTACTAGTGCA+AGG 0.628579 3_1:-14609222 None:intergenic
TGGCACAAAGTGCAACGCAA+CGG 0.633011 3_1:+14609572 Msa0350070:three_prime_UTR
GGAGATGATTGTAACACAGA+AGG 0.635671 3_1:-14608871 None:intergenic
AGAAAATGCATCTAACCCAC+CGG 0.636962 3_1:+14610781 Msa0350070:three_prime_UTR
ACTAAGAACAGTCTCAGCAT+AGG 0.640882 3_1:+14610752 Msa0350070:three_prime_UTR
AGGAGTCATAGTTTGAGGCA+CGG 0.641324 3_1:-14609109 None:intergenic
GTTTGATTGGAACGACGAAG+AGG 0.641530 3_1:+14602895 Msa0350070:CDS
GAGAGGCTTCAAGCTCCGGT+GGG 0.642429 3_1:-14610796 None:intergenic
AATGCAATCAATGTGAAATG+AGG 0.642544 3_1:-14611509 None:intergenic
AGCACATTCCACATTATCAG+CGG 0.644887 3_1:-14607830 None:intergenic
GTGACTGTCATTCTTATAGG+GGG 0.654649 3_1:+14611468 Msa0350070:three_prime_UTR
CTGTGTGTAAGCTTAATAAG+CGG 0.656424 3_1:+14606451 Msa0350070:CDS
ATCGACAAAGAAAACGGTAA+CGG 0.660108 3_1:-14602608 None:intergenic
TCGAACCTTAACAATAATGG+AGG 0.660791 3_1:+14606522 Msa0350070:CDS
AATATAATATGGGATGAGGG+AGG 0.660916 3_1:+14606348 Msa0350070:CDS
ACTGAACTTTCTAAATATCG+AGG 0.661650 3_1:+14606630 Msa0350070:CDS
GCCGATGAAGGTAAAGAACA+GGG 0.663411 3_1:+14606920 Msa0350070:three_prime_UTR
AGAGACCACACAGAATGGAA+GGG 0.665511 3_1:+14606877 Msa0350070:three_prime_UTR
AATGACTTTGAATTTGTGGG+TGG 0.666637 3_1:-14609254 None:intergenic
ACGGTAACGGAGTTTCTAGA+GGG 0.667944 3_1:-14602595 None:intergenic
TAAACTGTGAACATGGATGA+CGG 0.670853 3_1:+14611828 Msa0350070:three_prime_UTR
TGAGTTTGCCACATATCCTG+AGG 0.676069 3_1:-14606553 None:intergenic
AGTCAAAGATAAAACAAGAG+GGG 0.681406 3_1:+14608773 Msa0350070:three_prime_UTR
AAAAGTACCAGTTGAAAACA+CGG 0.682824 3_1:+14608746 Msa0350070:three_prime_UTR
TGGACCTCAAAAGATGGACA+AGG 0.698672 3_1:-14610716 None:intergenic
ACCAAGTGAACTTTCCCGTG+AGG 0.703337 3_1:+14610633 Msa0350070:three_prime_UTR
AGAGATGAAAGCCTTACACG+TGG 0.707131 3_1:-14602568 None:intergenic
AGATGTTCTGCAGAACACGA+AGG 0.707819 3_1:+14610828 Msa0350070:three_prime_UTR
TCACATCTTTAGCAGACCAG+AGG 0.711109 3_1:-14607630 None:intergenic
GGGAGGTTACCATAAAACGA+AGG 0.728180 3_1:-14608970 None:intergenic
CGATGACAATGAAAGCCGTG+AGG 0.730153 3_1:+14611751 Msa0350070:three_prime_UTR
TTAGCATTGGCATAGCAGGG+AGG 0.754765 3_1:-14608987 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTGTATTTAATCT+TGG + chr3_1:14602942-14602961 Msa0350070:intron 10.0%
!! AAAAAAAAAAAAAAAAAAGG+CGG - chr3_1:14603832-14603851 None:intergenic 10.0%
!!! ATACATCTTTTTTTTTTTTT+TGG + chr3_1:14604435-14604454 Msa0350070:intron 10.0%
!!! TACATCTTTTTTTTTTTTTT+GGG + chr3_1:14604436-14604455 Msa0350070:intron 10.0%
!! TTACATATTAACAATAAAAA+TGG - chr3_1:14605436-14605455 None:intergenic 10.0%
!! ATAATATCATTGTTTAATAA+TGG + chr3_1:14606308-14606327 Msa0350070:intron 10.0%
!! TATTAGATATAGAATAATAT+AGG - chr3_1:14607022-14607041 None:intergenic 10.0%
!! AAATAAAAAAAAAAAAGTTC+CGG + chr3_1:14607453-14607472 Msa0350070:intron 10.0%
!!! AGATTATCAAATAAATTTTA+TGG - chr3_1:14610117-14610136 None:intergenic 10.0%
!!! CATAATTTTTATTAAGAAAT+AGG + chr3_1:14611795-14611814 Msa0350070:three_prime_UTR 10.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr3_1:14604456-14604475 Msa0350070:intron 100.0%
!!! TTAGTTTAAATTAGTTTGAT+AGG - chr3_1:14602512-14602531 None:intergenic 15.0%
!!! ATTTTTAAGAAATGTTTGAT+TGG + chr3_1:14602882-14602901 Msa0350070:exon 15.0%
!!! TATTTATTTTGTGTTTTGTT+CGG + chr3_1:14603017-14603036 Msa0350070:intron 15.0%
!!! CAATTATAATTTGATTTTTG+AGG + chr3_1:14603549-14603568 Msa0350070:intron 15.0%
!!! ACATCTTTTTTTTTTTTTTG+GGG + chr3_1:14604437-14604456 Msa0350070:intron 15.0%
!! TTACTATATGTAATAAACAA+AGG - chr3_1:14604512-14604531 None:intergenic 15.0%
!! TTACATATTTACAACAAAAA+TGG - chr3_1:14605393-14605412 None:intergenic 15.0%
!!! ATTATTGGAACAATATTTTA+TGG + chr3_1:14605532-14605551 Msa0350070:intron 15.0%
!!! TTATTGGAACAATATTTTAT+GGG + chr3_1:14605533-14605552 Msa0350070:intron 15.0%
!!! GGTTAATTCTAAAAAATTTT+GGG + chr3_1:14605554-14605573 Msa0350070:intron 15.0%
!!! AAAAATATTGACTTCAAAAT+AGG + chr3_1:14605627-14605646 Msa0350070:intron 15.0%
!!! AAAATATTGACTTCAAAATA+GGG + chr3_1:14605628-14605647 Msa0350070:intron 15.0%
!!! TAGTGATTGAAAATTTTATA+GGG + chr3_1:14605659-14605678 Msa0350070:intron 15.0%
!! TTAAACAATGATATTATTGA+CGG - chr3_1:14606305-14606324 None:intergenic 15.0%
!!! CATTATTTTTCATATTATGA+CGG - chr3_1:14606800-14606819 None:intergenic 15.0%
!! AAAATAACAGAATAAATTCT+TGG - chr3_1:14608704-14608723 None:intergenic 15.0%
!!! TGGATATCAAATAAATTTTA+TGG - chr3_1:14610097-14610116 None:intergenic 15.0%
!!! TAAACCTATGATTTTTATTT+TGG + chr3_1:14611292-14611311 Msa0350070:intron 15.0%
!! AAATCCAAAATAAAAATCAT+AGG - chr3_1:14611299-14611318 None:intergenic 15.0%
!!! TTTTATTTTGGATTTAAGTA+TGG + chr3_1:14611304-14611323 Msa0350070:intron 15.0%
!!! TTTATTTTGGATTTAAGTAT+GGG + chr3_1:14611305-14611324 Msa0350070:intron 15.0%
!!! ACTTATTTTTCAAACATTAT+CGG - chr3_1:14611581-14611600 None:intergenic 15.0%
!! TGGAAGAAATAAAATACATT+GGG - chr3_1:14602393-14602412 None:intergenic 20.0%
!! ATGGAAGAAATAAAATACAT+TGG - chr3_1:14602394-14602413 None:intergenic 20.0%
!!! TTTGGTAATTAAAGATCTTA+AGG + chr3_1:14603171-14603190 Msa0350070:intron 20.0%
!!! TCATTTTCTCAAACTATTAT+CGG - chr3_1:14603229-14603248 None:intergenic 20.0%
!!! ATAGTTCTTAATTAGTTTTG+AGG + chr3_1:14603401-14603420 Msa0350070:intron 20.0%
!! GAATTATAAGAGTTGTTAAA+TGG - chr3_1:14603796-14603815 None:intergenic 20.0%
!! TTATGGTAATAGCATTATTT+AGG + chr3_1:14603850-14603869 Msa0350070:intron 20.0%
!!! TGAAAGTATTTTTTCAGATA+TGG + chr3_1:14603965-14603984 Msa0350070:intron 20.0%
!! ATATCAACTATATTCAACTT+CGG - chr3_1:14604049-14604068 None:intergenic 20.0%
!!! AAGTTGAATATAGTTGATAT+AGG + chr3_1:14604049-14604068 Msa0350070:intron 20.0%
!!! ATAGTTGATATAGGTTTATA+TGG + chr3_1:14604058-14604077 Msa0350070:intron 20.0%
!!! CATCTTTTTTTTTTTTTTGG+GGG + chr3_1:14604438-14604457 Msa0350070:intron 20.0%
!!! ATCTTTTTTTTTTTTTTGGG+GGG + chr3_1:14604439-14604458 Msa0350070:intron 20.0%
!!! TTATGTCCATGTTTTATAAA+AGG - chr3_1:14604563-14604582 None:intergenic 20.0%
!! TATTCCCTAAAAAAAAAGTA+CGG + chr3_1:14604612-14604631 Msa0350070:intron 20.0%
!!! CAGCTCTATTTTTTTTTTTT+GGG + chr3_1:14604762-14604781 Msa0350070:intron 20.0%
!!! TCTATTTTTTTTTTTTGGGA+GGG + chr3_1:14604766-14604785 Msa0350070:intron 20.0%
!! AATTACAATTCATTATCTGT+GGG - chr3_1:14605102-14605121 None:intergenic 20.0%
!!! TAACAAAAGTATTGCATATA+AGG - chr3_1:14605261-14605280 None:intergenic 20.0%
!!! CAATACTTTTGTTATATGTA+TGG + chr3_1:14605267-14605286 Msa0350070:intron 20.0%
!! TATATCCAATATATTGTTTG+TGG + chr3_1:14605317-14605336 Msa0350070:intron 20.0%
!! ATATCCAATATATTGTTTGT+GGG + chr3_1:14605318-14605337 Msa0350070:intron 20.0%
!! AATATTGTTCCAATAATTAC+AGG - chr3_1:14605529-14605548 None:intergenic 20.0%
!!! GGGTTAATTCTAAAAAATTT+TGG + chr3_1:14605553-14605572 Msa0350070:intron 20.0%
!!! GTAGTGATTGAAAATTTTAT+AGG + chr3_1:14605658-14605677 Msa0350070:intron 20.0%
!! AAAAATTTCAACACTAAACT+AGG + chr3_1:14605965-14605984 Msa0350070:intron 20.0%
!! AACATTTATACAATTAGGAA+TGG - chr3_1:14606850-14606869 None:intergenic 20.0%
!! TGTCAAACATTTATACAATT+AGG - chr3_1:14606855-14606874 None:intergenic 20.0%
!! ATAAAAGTCTTGGATTTATT+TGG + chr3_1:14607078-14607097 Msa0350070:intron 20.0%
!! AAAATCATTCAAAGTGAAAA+AGG + chr3_1:14607278-14607297 Msa0350070:intron 20.0%
!!! AGTTTATCTTTTGGAAAATT+TGG - chr3_1:14608113-14608132 None:intergenic 20.0%
!! TTTCCAAAAGATAAACTTAT+TGG + chr3_1:14608116-14608135 Msa0350070:intron 20.0%
!! TTCCAAAAGATAAACTTATT+GGG + chr3_1:14608117-14608136 Msa0350070:intron 20.0%
!!! TCTGATACCATTTTAAATTT+AGG + chr3_1:14608329-14608348 Msa0350070:intron 20.0%
!! GTAAGATCCTAAATTTAAAA+TGG - chr3_1:14608339-14608358 None:intergenic 20.0%
!!! TAAATAAGAGTATAAGACAT+TGG + chr3_1:14609817-14609836 Msa0350070:intron 20.0%
!! TAAAATTGAATAAAGAAGCA+CGG - chr3_1:14610886-14610905 None:intergenic 20.0%
!!! GTTTTAAACGATATGTATAT+TGG + chr3_1:14611043-14611062 Msa0350070:intron 20.0%
!! TAAATCATTGTTGCATAATA+AGG - chr3_1:14611247-14611266 None:intergenic 20.0%
!! AATTCAAGTAATTGATATGA+AGG - chr3_1:14611442-14611461 None:intergenic 20.0%
!!! TATCAATTACTTGAATTTTC+AGG + chr3_1:14611445-14611464 Msa0350070:intron 20.0%
!!! ATCAATTACTTGAATTTTCA+GGG + chr3_1:14611446-14611465 Msa0350070:intron 20.0%
!!! AAGTAATCTAAAATCTTAGA+AGG - chr3_1:14611943-14611962 None:intergenic 20.0%
!!! TTCTAAGATTTTAGATTACT+TGG + chr3_1:14611942-14611961 Msa0350070:three_prime_UTR 20.0%
!!! ATTTGTCTAAAATTTTGCAT+AGG + chr3_1:14612036-14612055 Msa0350070:three_prime_UTR 20.0%
! TAAAATACATTGGGAAATGA+GGG - chr3_1:14602384-14602403 None:intergenic 25.0%
! ATAAAATACATTGGGAAATG+AGG - chr3_1:14602385-14602404 None:intergenic 25.0%
! GAGAAAGAGAAAGAATAATA+CGG - chr3_1:14602706-14602725 None:intergenic 25.0%
!! TAGTTGGAAAATTTGATGAT+TGG + chr3_1:14603118-14603137 Msa0350070:intron 25.0%
!! TATAGTTAAGGAGCAATTTT+TGG + chr3_1:14603340-14603359 Msa0350070:intron 25.0%
!! ATAGTTAAGGAGCAATTTTT+GGG + chr3_1:14603341-14603360 Msa0350070:intron 25.0%
!!! TTTTGAGGCATTAGTATTTT+TGG + chr3_1:14603564-14603583 Msa0350070:intron 25.0%
!!! CATTAGTATTTTTGGTTGTT+AGG + chr3_1:14603572-14603591 Msa0350070:intron 25.0%
! TTATACTAAATAGCATATCG+TGG + chr3_1:14603720-14603739 Msa0350070:intron 25.0%
! TTATAAGAGTTGTTAAATGG+CGG - chr3_1:14603793-14603812 None:intergenic 25.0%
!! TAATAAAAGAGCATACAAGA+TGG + chr3_1:14604269-14604288 Msa0350070:intron 25.0%
! TGACTACAAAACTTGATTTA+GGG - chr3_1:14604328-14604347 None:intergenic 25.0%
! ATGACTACAAAACTTGATTT+AGG - chr3_1:14604329-14604348 None:intergenic 25.0%
!!! TAAATCAAGTTTTGTAGTCA+TGG + chr3_1:14604328-14604347 Msa0350070:intron 25.0%
!! TGATTTTTCTCATCTTTCTT+TGG - chr3_1:14604395-14604414 None:intergenic 25.0%
!!! TCTTTTTTTTTTTTTTGGGG+GGG + chr3_1:14604440-14604459 Msa0350070:intron 25.0%
!! ATCAGTCCTTTTATAAAACA+TGG + chr3_1:14604554-14604573 Msa0350070:intron 25.0%
! TTATAAAACATGGACATAAG+CGG + chr3_1:14604564-14604583 Msa0350070:intron 25.0%
!!! CTATCCGTACTTTTTTTTTA+GGG - chr3_1:14604619-14604638 None:intergenic 25.0%
!!! TCTATCCGTACTTTTTTTTT+AGG - chr3_1:14604620-14604639 None:intergenic 25.0%
! ATAACAATGCTCAAAAATCA+TGG - chr3_1:14604671-14604690 None:intergenic 25.0%
!!! GCAGCTCTATTTTTTTTTTT+TGG + chr3_1:14604761-14604780 Msa0350070:intron 25.0%
!!! CTCTATTTTTTTTTTTTGGG+AGG + chr3_1:14604765-14604784 Msa0350070:intron 25.0%
!! AAATGTTTAAAGTTCATGCA+TGG + chr3_1:14604789-14604808 Msa0350070:intron 25.0%
! TAACCAGTAGAGAAAAAATA+AGG + chr3_1:14605071-14605090 Msa0350070:intron 25.0%
! CAATTACAATTCATTATCTG+TGG - chr3_1:14605103-14605122 None:intergenic 25.0%
! GATAATGAATTGTAATTGAC+AGG + chr3_1:14605105-14605124 Msa0350070:intron 25.0%
! TTGACAGGAGAAAATATATA+AGG + chr3_1:14605120-14605139 Msa0350070:intron 25.0%
! TGACAGGAGAAAATATATAA+GGG + chr3_1:14605121-14605140 Msa0350070:intron 25.0%
! GGAAATTAATCATAGTTGAT+AGG + chr3_1:14605154-14605173 Msa0350070:intron 25.0%
! TTCTATGAAAAGATTTACTC+AGG + chr3_1:14605216-14605235 Msa0350070:intron 25.0%
! TCTATGAAAAGATTTACTCA+GGG + chr3_1:14605217-14605236 Msa0350070:intron 25.0%
! GTGTATATTACAAACTCAAA+TGG - chr3_1:14605365-14605384 None:intergenic 25.0%
!! ATGTTGAAGGAAAATTTTAG+AGG + chr3_1:14605687-14605706 Msa0350070:intron 25.0%
!! TGTTGAAGGAAAATTTTAGA+GGG + chr3_1:14605688-14605707 Msa0350070:intron 25.0%
!!! GAAAAGTTGGTGTATTTATA+GGG + chr3_1:14605716-14605735 Msa0350070:intron 25.0%
! CCAAAGTACGAATAAAATAT+GGG - chr3_1:14605759-14605778 None:intergenic 25.0%
!! CCATATTTTATTCGTACTTT+GGG + chr3_1:14605757-14605776 Msa0350070:intron 25.0%
!! ATGTCTGTTACAAAGTATTA+TGG + chr3_1:14605992-14606011 Msa0350070:intron 25.0%
!! TGTCTGTTACAAAGTATTAT+GGG + chr3_1:14605993-14606012 Msa0350070:intron 25.0%
! TGTCAAACCTAGTAATAAAA+CGG + chr3_1:14606168-14606187 Msa0350070:intron 25.0%
!!! TCTATTTCCGTTTTATTACT+AGG - chr3_1:14606178-14606197 None:intergenic 25.0%
!!! TTCAGCTTGCTAATATAATA+TGG + chr3_1:14606337-14606356 Msa0350070:intron 25.0%
!!! TCAGCTTGCTAATATAATAT+GGG + chr3_1:14606338-14606357 Msa0350070:intron 25.0%
! GTGATAAAATTGCTAATTAC+TGG + chr3_1:14606682-14606701 Msa0350070:CDS 25.0%
!! ATTTTTCATATTATGACGGT+GGG - chr3_1:14606796-14606815 None:intergenic 25.0%
!! TATTTTTCATATTATGACGG+TGG - chr3_1:14606797-14606816 None:intergenic 25.0%
! CATTATGATCATAAAAGTCT+TGG + chr3_1:14607068-14607087 Msa0350070:intron 25.0%
! TTTCACAGGAATAAATTTGA+AGG - chr3_1:14607218-14607237 None:intergenic 25.0%
! TTTCCTAGTTTAAGTAGTAA+AGG - chr3_1:14607332-14607351 None:intergenic 25.0%
! TTACTACTTAAACTAGGAAA+CGG + chr3_1:14607332-14607351 Msa0350070:intron 25.0%
!! AGAAATCTTTTCGTAGTTAA+GGG - chr3_1:14607773-14607792 None:intergenic 25.0%
! TAAACTAGATAGCATAAACT+AGG - chr3_1:14608074-14608093 None:intergenic 25.0%
!! AACCCAATAAGTTTATCTTT+TGG - chr3_1:14608122-14608141 None:intergenic 25.0%
!! TATTGGGTTATCTTAGATTT+TGG + chr3_1:14608133-14608152 Msa0350070:intron 25.0%
!! ATTGGGTTATCTTAGATTTT+GGG + chr3_1:14608134-14608153 Msa0350070:intron 25.0%
! TCTTATCTAGTTATCTTACA+AGG - chr3_1:14608183-14608202 None:intergenic 25.0%
!! ATACTTTATAAGCTCTTTTC+AGG + chr3_1:14608210-14608229 Msa0350070:intron 25.0%
!! TTTTCTCAATAGATTATGAG+TGG + chr3_1:14608452-14608471 Msa0350070:intron 25.0%
! TTGACACAATATTATGTCAA+GGG - chr3_1:14608651-14608670 None:intergenic 25.0%
! TAACAGAATAAATTCTTGGA+TGG - chr3_1:14608700-14608719 None:intergenic 25.0%
! AAAGTCAAAGATAAAACAAG+AGG + chr3_1:14608771-14608790 Msa0350070:three_prime_UTR 25.0%
! AAGTCAAAGATAAAACAAGA+GGG + chr3_1:14608772-14608791 Msa0350070:three_prime_UTR 25.0%
!! AAAGATTTGCAGGATTTTTA+TGG + chr3_1:14608796-14608815 Msa0350070:three_prime_UTR 25.0%
!!! AATTTTTCAATTTTCTCCTG+AGG - chr3_1:14609132-14609151 None:intergenic 25.0%
! AGGAGAAAATTGAAAAATTG+AGG + chr3_1:14609133-14609152 Msa0350070:three_prime_UTR 25.0%
! AGAAAATTGAAAAATTGAGG+CGG + chr3_1:14609136-14609155 Msa0350070:three_prime_UTR 25.0%
! TAGAATGACTTTGAATTTGT+GGG - chr3_1:14609260-14609279 None:intergenic 25.0%
!! GTACTAAGATCTTCAATTTT+AGG - chr3_1:14609297-14609316 None:intergenic 25.0%
! CAGTATGATTACTTTATCTA+TGG + chr3_1:14609777-14609796 Msa0350070:intron 25.0%
!!! TCTATGGTTGATAATTTCAA+AGG + chr3_1:14609793-14609812 Msa0350070:intron 25.0%
! GAAATATTATGAATCACTCT+TGG - chr3_1:14609847-14609866 None:intergenic 25.0%
!!! AACATATTGATTTTAGTACG+TGG + chr3_1:14609914-14609933 Msa0350070:intron 25.0%
! ACCAAAACAGTGTATATTAT+TGG + chr3_1:14609987-14610006 Msa0350070:intron 25.0%
!! TCCAATAATATACACTGTTT+TGG - chr3_1:14609991-14610010 None:intergenic 25.0%
! TTATTGGAATTAAACTGACT+AGG + chr3_1:14610003-14610022 Msa0350070:intron 25.0%
!!! TGAAAATGGGTTTTACTATA+GGG + chr3_1:14610044-14610063 Msa0350070:intron 25.0%
! ACTTACATTTACATCAGATT+CGG + chr3_1:14610168-14610187 Msa0350070:intron 25.0%
! TGTGATCATTTAAACAACAA+AGG - chr3_1:14610265-14610284 None:intergenic 25.0%
! GTTTATGACTTTATCTCTAA+TGG - chr3_1:14611277-14611296 None:intergenic 25.0%
! ATTGATATGAAGGCAAATAT+TGG - chr3_1:14611432-14611451 None:intergenic 25.0%
! TTTAGCCCTATTAATTTCAT+AGG - chr3_1:14611636-14611655 None:intergenic 25.0%
! CTTTAATCCATAAATAGTCT+AGG + chr3_1:14611665-14611684 Msa0350070:three_prime_UTR 25.0%
!!! ATTTTGATACCTAATGCAAA+GGG - chr3_1:14611882-14611901 None:intergenic 25.0%
!!! AATTTTGATACCTAATGCAA+AGG - chr3_1:14611883-14611902 None:intergenic 25.0%
! TTTGCATTAGGTATCAAAAT+TGG + chr3_1:14611882-14611901 Msa0350070:three_prime_UTR 25.0%
! AACATTTAGCCATTAAATCA+TGG + chr3_1:14611913-14611932 Msa0350070:three_prime_UTR 25.0%
TGAAAAAATGAAGGAGCAAA+TGG - chr3_1:14602413-14602432 None:intergenic 30.0%
!! GGGGATTTTTGAAAAAATGA+AGG - chr3_1:14602422-14602441 None:intergenic 30.0%
TTATGCATTATTTGCGAGAT+TGG - chr3_1:14602457-14602476 None:intergenic 30.0%
TGCAAAATCGACAAAGAAAA+CGG - chr3_1:14602617-14602636 None:intergenic 30.0%
!!! TGATTCTGGTTTTTTATCTG+TGG + chr3_1:14602846-14602865 Msa0350070:five_prime_UTR 30.0%
! GTAGCGTGTTTATATGTTTT+TGG + chr3_1:14603058-14603077 Msa0350070:intron 30.0%
TTCAAGCGATTATCAATCAT+TGG - chr3_1:14603467-14603486 None:intergenic 30.0%
TTGTTAGGATGAATAATACG+AGG + chr3_1:14603587-14603606 Msa0350070:intron 30.0%
CACTATAGCATAGTGAAATT+CGG - chr3_1:14603762-14603781 None:intergenic 30.0%
! AAAAAAAAAAGGCGGCTTTT+AGG - chr3_1:14603824-14603843 None:intergenic 30.0%
GAAGGTCTTGAATTTGAATT+TGG + chr3_1:14603923-14603942 Msa0350070:intron 30.0%
CTTTCAAATAATTTCCTGAG+AGG - chr3_1:14603951-14603970 None:intergenic 30.0%
GTTTATATGGTGAAAAGAGA+CGG + chr3_1:14604071-14604090 Msa0350070:intron 30.0%
TTTATATGGTGAAAAGAGAC+GGG + chr3_1:14604072-14604091 Msa0350070:intron 30.0%
TTATCCAATAAGCAATATCG+TGG + chr3_1:14604114-14604133 Msa0350070:intron 30.0%
TATCCAATAAGCAATATCGT+GGG + chr3_1:14604115-14604134 Msa0350070:intron 30.0%
GGAGGTTATCATAATTGTTA+GGG + chr3_1:14604366-14604385 Msa0350070:intron 30.0%
!!! CTTTTTTTTTTTTTTGGGGG+GGG + chr3_1:14604441-14604460 Msa0350070:intron 30.0%
!!! TTTTTTTTTTTTTTGGGGGG+GGG + chr3_1:14604442-14604461 Msa0350070:intron 30.0%
AAATCATGGAATCAGATGTA+AGG - chr3_1:14604657-14604676 None:intergenic 30.0%
! CTTTTTCCCATCTTTGTATT+TGG - chr3_1:14604874-14604893 None:intergenic 30.0%
TCACTACATATTCCTTCAAT+TGG - chr3_1:14604986-14605005 None:intergenic 30.0%
GACAGGAGAAAATATATAAG+GGG + chr3_1:14605122-14605141 Msa0350070:intron 30.0%
CAACTATGATTAATTTCCTG+AGG - chr3_1:14605152-14605171 None:intergenic 30.0%
! TTTGTTATATGTATGGCTGT+TGG + chr3_1:14605274-14605293 Msa0350070:intron 30.0%
AGAACCCACAAACAATATAT+TGG - chr3_1:14605325-14605344 None:intergenic 30.0%
TTATAGGGACTAAATGTTGA+AGG + chr3_1:14605674-14605693 Msa0350070:intron 30.0%
!! CGAAAAGTTGGTGTATTTAT+AGG + chr3_1:14605715-14605734 Msa0350070:intron 30.0%
! CCCATATTTTATTCGTACTT+TGG + chr3_1:14605756-14605775 Msa0350070:intron 30.0%
CCCAAAGTACGAATAAAATA+TGG - chr3_1:14605760-14605779 None:intergenic 30.0%
!! ATGAAGACTCATTTTTGTGA+TGG + chr3_1:14605863-14605882 Msa0350070:intron 30.0%
TAGTAGAAAATCCTACTTCA+TGG - chr3_1:14605929-14605948 None:intergenic 30.0%
TCTCTAAACAAACATAGACA+AGG - chr3_1:14606033-14606052 None:intergenic 30.0%
CTATGTTTGTTTAGAGAGTT+TGG + chr3_1:14606036-14606055 Msa0350070:intron 30.0%
TGAGAAGGAAAAGACATTAT+GGG - chr3_1:14606143-14606162 None:intergenic 30.0%
TGCTAATATAATATGGGATG+AGG + chr3_1:14606344-14606363 Msa0350070:CDS 30.0%
GCTAATATAATATGGGATGA+GGG + chr3_1:14606345-14606364 Msa0350070:CDS 30.0%
AAACAAGAAAGAAGTGAATC+AGG + chr3_1:14606422-14606441 Msa0350070:CDS 30.0%
AGTTCGAACCTTAACAATAA+TGG + chr3_1:14606519-14606538 Msa0350070:CDS 30.0%
ACTGAACTTTCTAAATATCG+AGG + chr3_1:14606630-14606649 Msa0350070:CDS 30.0%
! TTTTATCAAAATGCCGATGA+AGG + chr3_1:14606908-14606927 Msa0350070:three_prime_UTR 30.0%
!! TGATTTTGCTGATTATGACT+GGG + chr3_1:14606943-14606962 Msa0350070:three_prime_UTR 30.0%
TGAATTTCCGAAGTCTAAAA+TGG + chr3_1:14607114-14607133 Msa0350070:intron 30.0%
AAGTGATGAATACAACAGTT+AGG - chr3_1:14607155-14607174 None:intergenic 30.0%
TGAAGGAACTTAAACTAAGA+TGG - chr3_1:14607201-14607220 None:intergenic 30.0%
AGACCTTTACTACTTAAACT+AGG + chr3_1:14607326-14607345 Msa0350070:intron 30.0%
TACTACTTAAACTAGGAAAC+GGG + chr3_1:14607333-14607352 Msa0350070:intron 30.0%
!! TAAAAGTTGATGATTGTCAG+TGG + chr3_1:14607375-14607394 Msa0350070:intron 30.0%
!! AAAAGTTGATGATTGTCAGT+GGG + chr3_1:14607376-14607395 Msa0350070:intron 30.0%
CACATATAATGAAAGTCAAG+GGG - chr3_1:14607413-14607432 None:intergenic 30.0%
GCACATATAATGAAAGTCAA+GGG - chr3_1:14607414-14607433 None:intergenic 30.0%
CAATTGTTTACTCTTTACTC+CGG - chr3_1:14607475-14607494 None:intergenic 30.0%
! TTAGTCTTTGTCTCTTACAA+CGG + chr3_1:14607517-14607536 Msa0350070:intron 30.0%
!! ATGCTTTAAGGAATAGATCA+GGG + chr3_1:14607698-14607717 Msa0350070:three_prime_UTR 30.0%
! TGTTCTTCTTTGATTTCCAA+AGG - chr3_1:14607724-14607743 None:intergenic 30.0%
! CAGAAATCTTTTCGTAGTTA+AGG - chr3_1:14607774-14607793 None:intergenic 30.0%
CTTAACTACGAAAAGATTTC+TGG + chr3_1:14607772-14607791 Msa0350070:three_prime_UTR 30.0%
TAGAGAACTGAATAATAGAC+AGG - chr3_1:14607915-14607934 None:intergenic 30.0%
TCAGTTCTCTATTTGTATAG+TGG + chr3_1:14607924-14607943 Msa0350070:intron 30.0%
ATCTGAATCATACAGTCTAA+AGG - chr3_1:14607974-14607993 None:intergenic 30.0%
CTGTATGATTCAGATATGTT+AGG + chr3_1:14607979-14607998 Msa0350070:intron 30.0%
TTGTATGATCCAGATATGTT+AGG + chr3_1:14608005-14608024 Msa0350070:intron 30.0%
AACTAGGAAGCAATTATAGA+AGG - chr3_1:14608058-14608077 None:intergenic 30.0%
TATCTAGTTATCTTACAAGG+CGG - chr3_1:14608180-14608199 None:intergenic 30.0%
! TCACACATTGACTATAAAGA+AGG - chr3_1:14608423-14608442 None:intergenic 30.0%
AATTGCATTTCAGCATCTTA+TGG + chr3_1:14608542-14608561 Msa0350070:intron 30.0%
CTTGACACAATATTATGTCA+AGG - chr3_1:14608652-14608671 None:intergenic 30.0%
CTTGACATAATATTGTGTCA+AGG + chr3_1:14608650-14608669 Msa0350070:intron 30.0%
!! AAAAGTACCAGTTGAAAACA+CGG + chr3_1:14608746-14608765 Msa0350070:three_prime_UTR 30.0%
AGTCAAAGATAAAACAAGAG+GGG + chr3_1:14608773-14608792 Msa0350070:three_prime_UTR 30.0%
! TGCAGGATTTTTATGGTAAT+TGG + chr3_1:14608803-14608822 Msa0350070:three_prime_UTR 30.0%
ATGATGTTCTGATATGTTTC+AGG - chr3_1:14608934-14608953 None:intergenic 30.0%
GAACATCATAAATCCATATG+TGG + chr3_1:14608945-14608964 Msa0350070:three_prime_UTR 30.0%
! TAACTTTTCAAAGGACTCAA+CGG - chr3_1:14609078-14609097 None:intergenic 30.0%
CTAGAATGACTTTGAATTTG+TGG - chr3_1:14609261-14609280 None:intergenic 30.0%
ATTCAAAGTCATTCTAGTGA+TGG + chr3_1:14609264-14609283 Msa0350070:three_prime_UTR 30.0%
TTCAAAGTCATTCTAGTGAT+GGG + chr3_1:14609265-14609284 Msa0350070:three_prime_UTR 30.0%
GAATCATCTTGTTCAATTAG+AGG - chr3_1:14609324-14609343 None:intergenic 30.0%
TGTTTCCTTGCATACTAATT+TGG + chr3_1:14609468-14609487 Msa0350070:intron 30.0%
GTTTCCTTGCATACTAATTT+GGG + chr3_1:14609469-14609488 Msa0350070:intron 30.0%
ACTGTAAAAAAAGTTTGCCT+CGG - chr3_1:14609508-14609527 None:intergenic 30.0%
! AGTAGGTAGTATTTTACTGT+AGG - chr3_1:14609696-14609715 None:intergenic 30.0%
AATATGTTCCATGTATTACC+AGG - chr3_1:14609902-14609921 None:intergenic 30.0%
!! TGATTTTAGTACGTGGAATA+AGG + chr3_1:14609921-14609940 Msa0350070:intron 30.0%
! TAAACTGACTAGGTTTTCAT+AGG + chr3_1:14610013-14610032 Msa0350070:intron 30.0%
! AAACTGACTAGGTTTTCATA+GGG + chr3_1:14610014-14610033 Msa0350070:intron 30.0%
ATAGGGACTAAACTGAAAAT+GGG + chr3_1:14610031-14610050 Msa0350070:intron 30.0%
!! CTGAAAATGGGTTTTACTAT+AGG + chr3_1:14610043-14610062 Msa0350070:intron 30.0%
!! GAAAATGGGTTTTACTATAG+GGG + chr3_1:14610045-14610064 Msa0350070:intron 30.0%
GAATCTGATGTAAATGTAAG+TGG - chr3_1:14610169-14610188 None:intergenic 30.0%
! TCACATTTTGTGACTAAAGT+AGG + chr3_1:14610280-14610299 Msa0350070:intron 30.0%
! TCCTAGTTATCTTATTTGAG+AGG + chr3_1:14610312-14610331 Msa0350070:intron 30.0%
TCCTCTCAAATAAGATAACT+AGG - chr3_1:14610316-14610335 None:intergenic 30.0%
! AACACACTTAACAGTTTTAC+TGG - chr3_1:14610350-14610369 None:intergenic 30.0%
AGGAAATTATTCTGACAAAC+TGG + chr3_1:14610565-14610584 Msa0350070:three_prime_UTR 30.0%
AATCAACAACTTTCTCACAT+TGG + chr3_1:14610683-14610702 Msa0350070:three_prime_UTR 30.0%
ATCAACAACTTTCTCACATT+GGG + chr3_1:14610684-14610703 Msa0350070:three_prime_UTR 30.0%
!! TTATTTTATTGTCAGCCTTC+TGG + chr3_1:14610935-14610954 Msa0350070:intron 30.0%
! TGCTTAATTTGACATATGAG+TGG - chr3_1:14611149-14611168 None:intergenic 30.0%
!! ATGACACAAACTTTAAAGCA+TGG - chr3_1:14611194-14611213 None:intergenic 30.0%
GTCATGTGACTTTCTTTAAA+TGG - chr3_1:14611396-14611415 None:intergenic 30.0%
AATGCAATCAATGTGAAATG+AGG - chr3_1:14611512-14611531 None:intergenic 30.0%
! TTGCATTTCAAGTCAATACT+TGG + chr3_1:14611525-14611544 Msa0350070:three_prime_UTR 30.0%
CTATTAATTTCATAGGCTGT+GGG - chr3_1:14611629-14611648 None:intergenic 30.0%
CACAGCCTATGAAATTAATA+GGG + chr3_1:14611628-14611647 Msa0350070:three_prime_UTR 30.0%
CCATAATCCTAGACTATTTA+TGG - chr3_1:14611675-14611694 None:intergenic 30.0%
! CCATAAATAGTCTAGGATTA+TGG + chr3_1:14611672-14611691 Msa0350070:three_prime_UTR 30.0%
ATGTAAGTAAACTGTGAACA+TGG + chr3_1:14611821-14611840 Msa0350070:three_prime_UTR 30.0%
GAAGGATAACCATGATTTAA+TGG - chr3_1:14611925-14611944 None:intergenic 30.0%
TGAATGTAACCATTGAATCT+TGG + chr3_1:14611996-14612015 Msa0350070:three_prime_UTR 30.0%
AACATGATACCAAGATTCAA+TGG - chr3_1:14612008-14612027 None:intergenic 30.0%
ATCGACAAAGAAAACGGTAA+CGG - chr3_1:14602611-14602630 None:intergenic 35.0%
!! TTGAAGTGTTGTTGTGTAGT+TGG + chr3_1:14603102-14603121 Msa0350070:intron 35.0%
TATACAGCTCAGATACTCTT+CGG - chr3_1:14603324-14603343 None:intergenic 35.0%
GTATCTGAGCTGTATAGTTA+AGG + chr3_1:14603328-14603347 Msa0350070:intron 35.0%
GATTATCAATCATTGGTCCA+CGG - chr3_1:14603460-14603479 None:intergenic 35.0%
ATCGCTTGAAACTTTGATGT+CGG + chr3_1:14603477-14603496 Msa0350070:intron 35.0%
ATCATCACTTCAGTACATAG+TGG + chr3_1:14603505-14603524 Msa0350070:intron 35.0%
CTTTCGAATGTTGTCAATCA+CGG + chr3_1:14603629-14603648 Msa0350070:intron 35.0%
TGATAAAATCTGCGACACAA+TGG + chr3_1:14603671-14603690 Msa0350070:intron 35.0%
!! ATGGTGCTATAGCAACTATT+TGG + chr3_1:14603690-14603709 Msa0350070:intron 35.0%
CGAATTTCACTATGCTATAG+TGG + chr3_1:14603760-14603779 Msa0350070:intron 35.0%
ACGAAGTACAGAAAGTCAAA+GGG + chr3_1:14603889-14603908 Msa0350070:intron 35.0%
CAAAGGGGAAATAATTGAGA+AGG + chr3_1:14603905-14603924 Msa0350070:intron 35.0%
! ATTTGAATTTGGTTCCTCTC+AGG + chr3_1:14603934-14603953 Msa0350070:intron 35.0%
CTGAACTATCACAAACAGAA+TGG - chr3_1:14604020-14604039 None:intergenic 35.0%
TTATATGGTGAAAAGAGACG+GGG + chr3_1:14604073-14604092 Msa0350070:intron 35.0%
CAGACAGTAGGTTAAGAATA+GGG + chr3_1:14604168-14604187 Msa0350070:intron 35.0%
TTTGTAGTCATGGAGTGTAA+TGG + chr3_1:14604338-14604357 Msa0350070:intron 35.0%
CGGAGGTTATCATAATTGTT+AGG + chr3_1:14604365-14604384 Msa0350070:intron 35.0%
!!! TTTTTTTTTTTTTGGGGGGG+GGG + chr3_1:14604443-14604462 Msa0350070:intron 35.0%
TTCAACTGACAAGAAAATGC+TGG - chr3_1:14604732-14604751 None:intergenic 35.0%
AAGTAGAGGATTACTGGATT+AGG + chr3_1:14604939-14604958 Msa0350070:intron 35.0%
GGAATATGTAGTGAGTAAAC+AGG + chr3_1:14604992-14605011 Msa0350070:intron 35.0%
!!! GGTCCTTATTTTTTCTCTAC+TGG - chr3_1:14605077-14605096 None:intergenic 35.0%
ACAATTCATTATCTGTGGGA+TGG - chr3_1:14605098-14605117 None:intergenic 35.0%
GCATATAAGGTAATATGAGC+TGG - chr3_1:14605248-14605267 None:intergenic 35.0%
CGCGATGATATGTACATAAA+AGG - chr3_1:14605502-14605521 None:intergenic 35.0%
!! CTTTGGGATTATCACTTCAT+AGG + chr3_1:14605773-14605792 Msa0350070:intron 35.0%
GGATTATCACTTCATAGGAT+TGG + chr3_1:14605778-14605797 Msa0350070:intron 35.0%
!!! CTCATTTTTGTGATGGACTT+TGG + chr3_1:14605870-14605889 Msa0350070:intron 35.0%
! TAGAGAGTTTGGACTTTTGA+AGG + chr3_1:14606047-14606066 Msa0350070:intron 35.0%
!! AGTTTGGACTTTTGAAGGAA+AGG + chr3_1:14606052-14606071 Msa0350070:intron 35.0%
TACACCTAACATGACAGTAA+GGG - chr3_1:14606081-14606100 None:intergenic 35.0%
ATACACCTAACATGACAGTA+AGG - chr3_1:14606082-14606101 None:intergenic 35.0%
CTGAGAAGGAAAAGACATTA+TGG - chr3_1:14606144-14606163 None:intergenic 35.0%
AGGTTTGACATATACTGAGA+AGG - chr3_1:14606158-14606177 None:intergenic 35.0%
AGGGAAATACATGAAGAATG+AGG - chr3_1:14606218-14606237 None:intergenic 35.0%
CTGATAGTAGCAACATAAGT+AGG - chr3_1:14606252-14606271 None:intergenic 35.0%
AATATAATATGGGATGAGGG+AGG + chr3_1:14606348-14606367 Msa0350070:CDS 35.0%
TTATTAAGCTTACACACAGC+TGG - chr3_1:14606450-14606469 None:intergenic 35.0%
CTGTGTGTAAGCTTAATAAG+CGG + chr3_1:14606451-14606470 Msa0350070:CDS 35.0%
ATCAAAATCAGCTTTCGTCT+CGG - chr3_1:14606484-14606503 None:intergenic 35.0%
!! GCTGATTTTGATGGAAAACT+AGG + chr3_1:14606492-14606511 Msa0350070:CDS 35.0%
TCGAACCTTAACAATAATGG+AGG + chr3_1:14606522-14606541 Msa0350070:CDS 35.0%
GTTGTCCTCCATTATTGTTA+AGG - chr3_1:14606530-14606549 None:intergenic 35.0%
!! GTGATTTTGCTGATTATGAC+TGG + chr3_1:14606942-14606961 Msa0350070:three_prime_UTR 35.0%
!! GAAGTTTTGATGACCTTGAT+CGG + chr3_1:14606975-14606994 Msa0350070:three_prime_UTR 35.0%
TTTACCTGAAAATCCGATCA+AGG - chr3_1:14606991-14607010 None:intergenic 35.0%
CAAGCATATGTCTGATAACA+TGG + chr3_1:14607042-14607061 Msa0350070:intron 35.0%
! GTTTGGTCCATTTTAGACTT+CGG - chr3_1:14607124-14607143 None:intergenic 35.0%
GATGAATACAACAGTTAGGA+CGG - chr3_1:14607151-14607170 None:intergenic 35.0%
CTTTATTGTTGCAGCTACAA+CGG - chr3_1:14607257-14607276 None:intergenic 35.0%
ACTACTTAAACTAGGAAACG+GGG + chr3_1:14607334-14607353 Msa0350070:intron 35.0%
TATAATGAAAGTCAAGGGGA+AGG - chr3_1:14607409-14607428 None:intergenic 35.0%
GGCACATATAATGAAAGTCA+AGG - chr3_1:14607415-14607434 None:intergenic 35.0%
TTCATTATATGTGCCCATGA+TGG + chr3_1:14607420-14607439 Msa0350070:intron 35.0%
TCATTATATGTGCCCATGAT+GGG + chr3_1:14607421-14607440 Msa0350070:intron 35.0%
TTTCCAATGTTACCCATCAT+GGG - chr3_1:14607436-14607455 None:intergenic 35.0%
ATTTCCAATGTTACCCATCA+TGG - chr3_1:14607437-14607456 None:intergenic 35.0%
AGCAATGATGACCCTATATT+TGG + chr3_1:14607580-14607599 Msa0350070:intron 35.0%
CAGAATTATCAAGACTTGCA+TGG - chr3_1:14607606-14607625 None:intergenic 35.0%
! TTGATAATTCTGATGACCTC+TGG + chr3_1:14607614-14607633 Msa0350070:three_prime_UTR 35.0%
! CTATTCCTTAAAGCATCAGT+GGG - chr3_1:14607694-14607713 None:intergenic 35.0%
! TCTATTCCTTAAAGCATCAG+TGG - chr3_1:14607695-14607714 None:intergenic 35.0%
!! GATGCTTTAAGGAATAGATC+AGG + chr3_1:14607697-14607716 Msa0350070:three_prime_UTR 35.0%
! TTTTCTATACTCTGACAAGC+AGG - chr3_1:14607799-14607818 None:intergenic 35.0%
AGAACTGAATAATAGACAGG+TGG - chr3_1:14607912-14607931 None:intergenic 35.0%
! CATTGACTATAAAGAAGGCT+TGG - chr3_1:14608418-14608437 None:intergenic 35.0%
ATTCTTACTCTTGCATGAGA+GGG - chr3_1:14608494-14608513 None:intergenic 35.0%
AATTCTTACTCTTGCATGAG+AGG - chr3_1:14608495-14608514 None:intergenic 35.0%
GATGCTGAAATGCAATTAGA+AGG - chr3_1:14608539-14608558 None:intergenic 35.0%
! GTGTTTTCAACTGGTACTTT+TGG - chr3_1:14608747-14608766 None:intergenic 35.0%
!! ACTTTTTCCGTGTTTTCAAC+TGG - chr3_1:14608756-14608775 None:intergenic 35.0%
AGTTTCAGTCAGGAAATCTT+AGG + chr3_1:14609013-14609032 Msa0350070:three_prime_UTR 35.0%
! GAGTCCTTTGAAAAGTTATG+CGG + chr3_1:14609080-14609099 Msa0350070:three_prime_UTR 35.0%
! AGTCCTTTGAAAAGTTATGC+GGG + chr3_1:14609081-14609100 Msa0350070:three_prime_UTR 35.0%
AAATTGAAAAATTGAGGCGG+CGG + chr3_1:14609139-14609158 Msa0350070:three_prime_UTR 35.0%
AATGACTTTGAATTTGTGGG+TGG - chr3_1:14609257-14609276 None:intergenic 35.0%
TTGAAGAAACCATATTGTGC+AGG + chr3_1:14609379-14609398 Msa0350070:three_prime_UTR 35.0%
GCTTCAGGATGTTATATCAA+AGG + chr3_1:14609401-14609420 Msa0350070:three_prime_UTR 35.0%
CTGTAAAAAAAGTTTGCCTC+GGG - chr3_1:14609507-14609526 None:intergenic 35.0%
GCTTTCTTCTCTTGCAAAAA+CGG - chr3_1:14609650-14609669 None:intergenic 35.0%
! GTAGGTTTTCTAACCTGTTT+TGG - chr3_1:14609678-14609697 None:intergenic 35.0%
GTCACAGTAATTGAAGTAGT+AGG - chr3_1:14609713-14609732 None:intergenic 35.0%
TGCTCATATTGAATCAATCC+TGG + chr3_1:14609881-14609900 Msa0350070:intron 35.0%
GAATCAATCCTGGTAATACA+TGG + chr3_1:14609891-14609910 Msa0350070:intron 35.0%
GGACTAAAGTCAAAACAACA+AGG + chr3_1:14609942-14609961 Msa0350070:intron 35.0%
AACAAGGATCAAAGTACGTT+TGG + chr3_1:14609958-14609977 Msa0350070:intron 35.0%
ACAAGGATCAAAGTACGTTT+GGG + chr3_1:14609959-14609978 Msa0350070:intron 35.0%
CATAGGGACTAAACTGAAAA+TGG + chr3_1:14610030-14610049 Msa0350070:intron 35.0%
TAGATGATTTACCGTTAGCT+AGG + chr3_1:14610198-14610217 Msa0350070:intron 35.0%
AGTTTACTTAGCCTAGCTAA+CGG - chr3_1:14610212-14610231 None:intergenic 35.0%
TTGTGACTAAAGTAGGACTT+CGG + chr3_1:14610287-14610306 Msa0350070:intron 35.0%
GTACGGGAAAACTAGTTATT+AGG - chr3_1:14610433-14610452 None:intergenic 35.0%
AGGTCTATGAAAGAGTAAAC+GGG - chr3_1:14610534-14610553 None:intergenic 35.0%
CAGGTCTATGAAAGAGTAAA+CGG - chr3_1:14610535-14610554 None:intergenic 35.0%
TTTACTCTTTCATAGACCTG+TGG + chr3_1:14610535-14610554 Msa0350070:three_prime_UTR 35.0%
TAATTTCCTGTTAACTCCAC+AGG - chr3_1:14610554-14610573 None:intergenic 35.0%
GAACATCTTTCTTCATTGAG+AGG - chr3_1:14610816-14610835 None:intergenic 35.0%
ATAACATGCAAGCATGAAAC+TGG - chr3_1:14611001-14611020 None:intergenic 35.0%
TGTCTATCTGACCATACTTA+AGG + chr3_1:14611070-14611089 Msa0350070:intron 35.0%
! TTTAAAGCATGGTCTAAGTC+AGG - chr3_1:14611183-14611202 None:intergenic 35.0%
AAGAAAGTCACATGACTCTT+TGG + chr3_1:14611400-14611419 Msa0350070:intron 35.0%
! GTCAATACTTGGCATGATTT+TGG + chr3_1:14611536-14611555 Msa0350070:three_prime_UTR 35.0%
! AATACTTGGCATGATTTTGG+AGG + chr3_1:14611539-14611558 Msa0350070:three_prime_UTR 35.0%
!! ATGATTTTGGAGGTACATTG+AGG + chr3_1:14611549-14611568 Msa0350070:three_prime_UTR 35.0%
!! TGATTTTGGAGGTACATTGA+GGG + chr3_1:14611550-14611569 Msa0350070:three_prime_UTR 35.0%
CCTATTAATTTCATAGGCTG+TGG - chr3_1:14611630-14611649 None:intergenic 35.0%
CCACAGCCTATGAAATTAAT+AGG + chr3_1:14611627-14611646 Msa0350070:three_prime_UTR 35.0%
TCAACTATTGACAGTCTTCA+AGG - chr3_1:14611727-14611746 None:intergenic 35.0%
TGAAGACTGTCAATAGTTGA+TGG + chr3_1:14611727-14611746 Msa0350070:three_prime_UTR 35.0%
TAAACTGTGAACATGGATGA+CGG + chr3_1:14611828-14611847 Msa0350070:three_prime_UTR 35.0%
ACATTGGGAAATGAGGGTTT+GGG - chr3_1:14602378-14602397 None:intergenic 40.0%
TACATTGGGAAATGAGGGTT+TGG - chr3_1:14602379-14602398 None:intergenic 40.0%
CATTATTTGCGAGATTGGAG+GGG - chr3_1:14602452-14602471 None:intergenic 40.0%
GCATTATTTGCGAGATTGGA+GGG - chr3_1:14602453-14602472 None:intergenic 40.0%
TGCATTATTTGCGAGATTGG+AGG - chr3_1:14602454-14602473 None:intergenic 40.0%
! TTTGGAATTCTCCACGTGTA+AGG + chr3_1:14602557-14602576 Msa0350070:five_prime_UTR 40.0%
!!! AACGACGCTGTTTTGTTTCA+TGG + chr3_1:14602758-14602777 Msa0350070:five_prime_UTR 40.0%
AGAATTAGCTCAATCATCGC+CGG - chr3_1:14602814-14602833 None:intergenic 40.0%
CTACGTCTACAGTTTGATTC+TGG + chr3_1:14602832-14602851 Msa0350070:five_prime_UTR 40.0%
GACAAGGTAAGTATCTGACA+CGG + chr3_1:14603285-14603304 Msa0350070:intron 40.0%
ACAAGGTAAGTATCTGACAC+GGG + chr3_1:14603286-14603305 Msa0350070:intron 40.0%
!! GTTAAGGAGCAATTTTTGGG+AGG + chr3_1:14603344-14603363 Msa0350070:intron 40.0%
!!! AGTTTTGAGGTGATTGCTAG+TGG + chr3_1:14603414-14603433 Msa0350070:intron 40.0%
!!! GTTTTGAGGTGATTGCTAGT+GGG + chr3_1:14603415-14603434 Msa0350070:intron 40.0%
TGAATCGACACTAATCACTC+AGG - chr3_1:14603531-14603550 None:intergenic 40.0%
ATGTTGTCAATCACGGATAG+CGG + chr3_1:14603636-14603655 Msa0350070:intron 40.0%
!! TCACGGATAGCGGAAAATAT+AGG + chr3_1:14603646-14603665 Msa0350070:intron 40.0%
AGCATATCGTGGATCTATAG+CGG + chr3_1:14603731-14603750 Msa0350070:intron 40.0%
GACGAAGTACAGAAAGTCAA+AGG + chr3_1:14603888-14603907 Msa0350070:intron 40.0%
CGAAGTACAGAAAGTCAAAG+GGG + chr3_1:14603890-14603909 Msa0350070:intron 40.0%
GTTCCCACGATATTGCTTAT+TGG - chr3_1:14604121-14604140 None:intergenic 40.0%
CTGGCGCAATAGTAAGATAT+AGG - chr3_1:14604151-14604170 None:intergenic 40.0%
CCTATTCTTAACCTACTGTC+TGG - chr3_1:14604170-14604189 None:intergenic 40.0%
CCAGACAGTAGGTTAAGAAT+AGG + chr3_1:14604167-14604186 Msa0350070:intron 40.0%
!! TGTGAGCTTTGTTTCTGATG+TGG + chr3_1:14604240-14604259 Msa0350070:intron 40.0%
!! GTGAGCTTTGTTTCTGATGT+GGG + chr3_1:14604241-14604260 Msa0350070:intron 40.0%
!! CTTTGTTTCTGATGTGGGAA+TGG + chr3_1:14604246-14604265 Msa0350070:intron 40.0%
! TCATGGAGTGTAATGGAGAT+CGG + chr3_1:14604345-14604364 Msa0350070:intron 40.0%
!!! TTTTTTTTTTTTGGGGGGGG+GGG + chr3_1:14604444-14604463 Msa0350070:intron 40.0%
CCTACTTTCTCACTTCTGAT+AGG - chr3_1:14604848-14604867 None:intergenic 40.0%
CCTATCAGAAGTGAGAAAGT+AGG + chr3_1:14604845-14604864 Msa0350070:intron 40.0%
ATCAGAAGTGAGAAAGTAGG+AGG + chr3_1:14604848-14604867 Msa0350070:intron 40.0%
TAGGAGGCCAAATACAAAGA+TGG + chr3_1:14604864-14604883 Msa0350070:intron 40.0%
AGGAGGCCAAATACAAAGAT+GGG + chr3_1:14604865-14604884 Msa0350070:intron 40.0%
TGTTACTAGCAGCCAATTGA+AGG + chr3_1:14604971-14604990 Msa0350070:intron 40.0%
ATATATAAGGGGTCATCCTC+AGG + chr3_1:14605133-14605152 Msa0350070:intron 40.0%
! TCGCGTTAGCCTGTAATTAT+TGG + chr3_1:14605517-14605536 Msa0350070:intron 40.0%
TTAGAGGGACTACGAAAAGT+TGG + chr3_1:14605703-14605722 Msa0350070:intron 40.0%
GATTCTGGGTTCTTCTTCTT+TGG - chr3_1:14605829-14605848 None:intergenic 40.0%
GCAATCTTTCTCCATGAAGT+AGG + chr3_1:14605915-14605934 Msa0350070:intron 40.0%
TAAGTAGGCACAAGGAAGAA+GGG - chr3_1:14606237-14606256 None:intergenic 40.0%
ATAAGTAGGCACAAGGAAGA+AGG - chr3_1:14606238-14606257 None:intergenic 40.0%
TAGCAACATAAGTAGGCACA+AGG - chr3_1:14606245-14606264 None:intergenic 40.0%
TTAAGATCTTCACTTGCCTC+TGG - chr3_1:14606402-14606421 None:intergenic 40.0%
TCAAAATCAGCTTTCGTCTC+GGG - chr3_1:14606483-14606502 None:intergenic 40.0%
!! GAGACGAAAGCTGATTTTGA+TGG + chr3_1:14606483-14606502 Msa0350070:CDS 40.0%
!!! CTGATCAATTTTAGCTGCAC+TGG - chr3_1:14606598-14606617 None:intergenic 40.0%
CAGTGCAGCTAAAATTGATC+AGG + chr3_1:14606596-14606615 Msa0350070:CDS 40.0%
CTGCACAAACAAAAACGCAT+AGG - chr3_1:14606739-14606758 None:intergenic 40.0%
!! CTATGCGTTTTTGTTTGTGC+AGG + chr3_1:14606737-14606756 Msa0350070:three_prime_UTR 40.0%
ACCCTGTTCTTTACCTTCAT+CGG - chr3_1:14606924-14606943 None:intergenic 40.0%
GATTATGACTGGGCTAACAT+AGG + chr3_1:14606953-14606972 Msa0350070:three_prime_UTR 40.0%
! ATGACCTTGATCGGATTTTC+AGG + chr3_1:14606984-14607003 Msa0350070:three_prime_UTR 40.0%
GACTTGCATGGCCAAATATA+GGG - chr3_1:14607594-14607613 None:intergenic 40.0%
AGACTTGCATGGCCAAATAT+AGG - chr3_1:14607595-14607614 None:intergenic 40.0%
AGCACATTCCACATTATCAG+CGG - chr3_1:14607833-14607852 None:intergenic 40.0%
GGAGATAGAAGTAAGCCTAT+TGG + chr3_1:14607853-14607872 Msa0350070:three_prime_UTR 40.0%
AGACAGGTTCCTAACATATC+TGG - chr3_1:14608017-14608036 None:intergenic 40.0%
GCAAAGTGAGCAAAATAGAC+AGG - chr3_1:14608033-14608052 None:intergenic 40.0%
!! ATCTTACAAGGCGGTTTTGT+GGG - chr3_1:14608171-14608190 None:intergenic 40.0%
! TATCTTACAAGGCGGTTTTG+TGG - chr3_1:14608172-14608191 None:intergenic 40.0%
! CAATAGTGTTGGACATGAAC+GGG - chr3_1:14608281-14608300 None:intergenic 40.0%
! CCAATAGTGTTGGACATGAA+CGG - chr3_1:14608282-14608301 None:intergenic 40.0%
ATGTCCAACACTATTGGTGA+GGG + chr3_1:14608285-14608304 Msa0350070:intron 40.0%
TCAAACAGATTGCACACAGA+AGG - chr3_1:14608593-14608612 None:intergenic 40.0%
!! ATTCTTGGATGGCTTTGAGA+AGG - chr3_1:14608689-14608708 None:intergenic 40.0%
! TTGGTCTTCTTCAGCAACAT+CGG + chr3_1:14608822-14608841 Msa0350070:three_prime_UTR 40.0%
GGAGATGATTGTAACACAGA+AGG - chr3_1:14608874-14608893 None:intergenic 40.0%
TCATCTCCCTCTTCAATTCT+TGG + chr3_1:14608886-14608905 Msa0350070:three_prime_UTR 40.0%
CATCTCCCTCTTCAATTCTT+GGG + chr3_1:14608887-14608906 Msa0350070:three_prime_UTR 40.0%
! TCTGATATGTTTCAGGTCCT+AGG - chr3_1:14608927-14608946 None:intergenic 40.0%
!! TAAAACGAAGGTGCCACATA+TGG - chr3_1:14608961-14608980 None:intergenic 40.0%
! TATGTGGCACCTTCGTTTTA+TGG + chr3_1:14608961-14608980 Msa0350070:three_prime_UTR 40.0%
GACTGAAACTGTGTTAGCAT+TGG - chr3_1:14609003-14609022 None:intergenic 40.0%
ATGCTAACACAGTTTCAGTC+AGG + chr3_1:14609003-14609022 Msa0350070:three_prime_UTR 40.0%
TCAGAAACAACAGCAAGTAC+TGG + chr3_1:14609188-14609207 Msa0350070:three_prime_UTR 40.0%
CAGAAACAACAGCAAGTACT+GGG + chr3_1:14609189-14609208 Msa0350070:three_prime_UTR 40.0%
GTTTACTAGTGCAAGGAACT+TGG - chr3_1:14609218-14609237 None:intergenic 40.0%
CTTGCATACTAATTTGGGCA+CGG + chr3_1:14609474-14609493 Msa0350070:intron 40.0%
AAGAAAGCAGTAGCCAAAAC+AGG + chr3_1:14609662-14609681 Msa0350070:three_prime_UTR 40.0%
AGCTAGGCTAAGTAAACTGT+TGG + chr3_1:14610214-14610233 Msa0350070:intron 40.0%
! GGCTAAGTAAACTGTTGGTT+CGG + chr3_1:14610219-14610238 Msa0350070:intron 40.0%
!! GCTAAGTAAACTGTTGGTTC+GGG + chr3_1:14610220-14610239 Msa0350070:intron 40.0%
ATATCTGTGTGATACCAGCA+TGG - chr3_1:14610459-14610478 None:intergenic 40.0%
TTCGTCTCTGTTTCAACATC+AGG - chr3_1:14610491-14610510 None:intergenic 40.0%
! GAATCCTTGTCCATCTTTTG+AGG + chr3_1:14610712-14610731 Msa0350070:three_prime_UTR 40.0%
! ATAGGTTGGACCTCAAAAGA+TGG - chr3_1:14610725-14610744 None:intergenic 40.0%
!!! ATCTTTTGAGGTCCAACCTA+TGG + chr3_1:14610724-14610743 Msa0350070:three_prime_UTR 40.0%
TCTTAGTCTGATCCATAGGT+TGG - chr3_1:14610739-14610758 None:intergenic 40.0%
CTGTTCTTAGTCTGATCCAT+AGG - chr3_1:14610743-14610762 None:intergenic 40.0%
ACTAAGAACAGTCTCAGCAT+AGG + chr3_1:14610752-14610771 Msa0350070:three_prime_UTR 40.0%
AGAAAATGCATCTAACCCAC+CGG + chr3_1:14610781-14610800 Msa0350070:three_prime_UTR 40.0%
CAATGAGCATGGAAGGAATA+AGG - chr3_1:14610863-14610882 None:intergenic 40.0%
TCTACATGGATACTTGAGCT+TGG - chr3_1:14610968-14610987 None:intergenic 40.0%
AGGGTGACTGTCATTCTTAT+AGG + chr3_1:14611465-14611484 Msa0350070:intron 40.0%
GGGTGACTGTCATTCTTATA+GGG + chr3_1:14611466-14611485 Msa0350070:intron 40.0%
GGTGACTGTCATTCTTATAG+GGG + chr3_1:14611467-14611486 Msa0350070:three_prime_UTR 40.0%
GTGACTGTCATTCTTATAGG+GGG + chr3_1:14611468-14611487 Msa0350070:three_prime_UTR 40.0%
TCTTATAGGGGGAGTTTACT+CGG + chr3_1:14611479-14611498 Msa0350070:three_prime_UTR 40.0%
TTAATTTCATAGGCTGTGGG+CGG - chr3_1:14611626-14611645 None:intergenic 40.0%
AAACTGTGAACATGGATGAC+GGG + chr3_1:14611829-14611848 Msa0350070:three_prime_UTR 40.0%
ATTGGGAAATGAGGGTTTGG+GGG - chr3_1:14602376-14602395 None:intergenic 45.0%
CATTGGGAAATGAGGGTTTG+GGG - chr3_1:14602377-14602396 None:intergenic 45.0%
AGAGATGAAAGCCTTACACG+TGG - chr3_1:14602571-14602590 None:intergenic 45.0%
!! ACGGTAACGGAGTTTCTAGA+GGG - chr3_1:14602598-14602617 None:intergenic 45.0%
!! AACGGTAACGGAGTTTCTAG+AGG - chr3_1:14602599-14602618 None:intergenic 45.0%
GTTTGATTGGAACGACGAAG+AGG + chr3_1:14602895-14602914 Msa0350070:CDS 45.0%
CAAGGTAAGTATCTGACACG+GGG + chr3_1:14603287-14603306 Msa0350070:intron 45.0%
GCTCAGATACTCTTCGGATT+AGG - chr3_1:14603318-14603337 None:intergenic 45.0%
! AAACTCTCTCTCTAGCTCAG+AGG - chr3_1:14603379-14603398 None:intergenic 45.0%
TCTGAGCTAGAGAGAGAGTT+TGG + chr3_1:14603378-14603397 Msa0350070:intron 45.0%
! CTAGTGGGCAAGTTTCTATG+AGG + chr3_1:14603430-14603449 Msa0350070:intron 45.0%
AGTTTCTATGAGGTCTACCG+TGG + chr3_1:14603440-14603459 Msa0350070:intron 45.0%
!!! AAAAGGCGGCTTTTAGGACA+AGG - chr3_1:14603818-14603837 None:intergenic 45.0%
TTACTATTGCGCCAGACAGT+AGG + chr3_1:14604156-14604175 Msa0350070:intron 45.0%
GACAGTAGACTTCTGAGTGA+AGG + chr3_1:14604196-14604215 Msa0350070:intron 45.0%
ACTTCTGAGTGAAGGACTGA+AGG + chr3_1:14604204-14604223 Msa0350070:intron 45.0%
!!! TTTTTTTTTTTGGGGGGGGG+GGG + chr3_1:14604445-14604464 Msa0350070:intron 45.0%
!! ACATAAGCGGCAAGTACTGA+TGG + chr3_1:14604577-14604596 Msa0350070:intron 45.0%
TATCCTTCCGTTGTTCCCAT+TGG + chr3_1:14604688-14604707 Msa0350070:intron 45.0%
TTGACTGCCAATGGGAACAA+CGG - chr3_1:14604698-14604717 None:intergenic 45.0%
TAGAAGCCTTGACTGCCAAT+GGG - chr3_1:14604706-14604725 None:intergenic 45.0%
AAGCATCCTGTTAGCAAGCT+AGG + chr3_1:14604891-14604910 Msa0350070:intron 45.0%
!! CATAGACCTAGCTTGCTAAC+AGG - chr3_1:14604900-14604919 None:intergenic 45.0%
CAAGCTAGGTCTATGTTGAG+AGG + chr3_1:14604905-14604924 Msa0350070:intron 45.0%
GGATGGAAGTAGAGGATTAC+TGG + chr3_1:14604933-14604952 Msa0350070:intron 45.0%
GCTTCCCTTACTGTCATGTT+AGG + chr3_1:14606074-14606093 Msa0350070:intron 45.0%
!! TCATATTGTGCCGTTTCCAG+AGG + chr3_1:14606383-14606402 Msa0350070:CDS 45.0%
! TCTTCACTTGCCTCTGGAAA+CGG - chr3_1:14606396-14606415 None:intergenic 45.0%
TGAGTTTGCCACATATCCTG+AGG - chr3_1:14606556-14606575 None:intergenic 45.0%
CGAGGTGAACTTAGCAAACT+CGG + chr3_1:14606648-14606667 Msa0350070:CDS 45.0%
CTTAGCAAACTCGGTACATC+AGG + chr3_1:14606657-14606676 Msa0350070:CDS 45.0%
ACAGAAGAGACCACACAGAA+TGG + chr3_1:14606872-14606891 Msa0350070:three_prime_UTR 45.0%
AAGAGACCACACAGAATGGA+AGG + chr3_1:14606876-14606895 Msa0350070:three_prime_UTR 45.0%
AGAGACCACACAGAATGGAA+GGG + chr3_1:14606877-14606896 Msa0350070:three_prime_UTR 45.0%
TGCCGATGAAGGTAAAGAAC+AGG + chr3_1:14606919-14606938 Msa0350070:three_prime_UTR 45.0%
GCCGATGAAGGTAAAGAACA+GGG + chr3_1:14606920-14606939 Msa0350070:three_prime_UTR 45.0%
TAGCTGCACATAGGTTTCAC+AGG - chr3_1:14607232-14607251 None:intergenic 45.0%
TCACATCTTTAGCAGACCAG+AGG - chr3_1:14607633-14607652 None:intergenic 45.0%
! CTTAAAGCATCAGTGGGACT+TGG - chr3_1:14607688-14607707 None:intergenic 45.0%
CAAGTCCCACTGATGCTTTA+AGG + chr3_1:14607686-14607705 Msa0350070:three_prime_UTR 45.0%
AAGGAATAGATCAGGGCCTT+TGG + chr3_1:14607705-14607724 Msa0350070:three_prime_UTR 45.0%
! ACACACAACCGCTGATAATG+TGG + chr3_1:14607822-14607841 Msa0350070:three_prime_UTR 45.0%
! GCTGATAATGTGGAATGTGC+TGG + chr3_1:14607832-14607851 Msa0350070:three_prime_UTR 45.0%
!! CGGTTTTGTGGGATTGAGTT+AGG - chr3_1:14608160-14608179 None:intergenic 45.0%
CCGTTCATGTCCAACACTAT+TGG + chr3_1:14608279-14608298 Msa0350070:intron 45.0%
CATGTCCAACACTATTGGTG+AGG + chr3_1:14608284-14608303 Msa0350070:intron 45.0%
AAAGCCCTCACCAATAGTGT+TGG - chr3_1:14608292-14608311 None:intergenic 45.0%
! GGTGAGGGCTTTATGAATCT+AGG + chr3_1:14608300-14608319 Msa0350070:intron 45.0%
ACAAGAGGGGAAAGATTTGC+AGG + chr3_1:14608786-14608805 Msa0350070:three_prime_UTR 45.0%
GGTTGCCCAAGAATTGAAGA+GGG - chr3_1:14608895-14608914 None:intergenic 45.0%
TGGTTGCCCAAGAATTGAAG+AGG - chr3_1:14608896-14608915 None:intergenic 45.0%
! TCAGGTCCTAGGAGTTGATT+TGG - chr3_1:14608916-14608935 None:intergenic 45.0%
GGGAGGTTACCATAAAACGA+AGG - chr3_1:14608973-14608992 None:intergenic 45.0%
!! GTGTTAGCATTGGCATAGCA+GGG - chr3_1:14608993-14609012 None:intergenic 45.0%
!! TGTGTTAGCATTGGCATAGC+AGG - chr3_1:14608994-14609013 None:intergenic 45.0%
TCTGGGTATGAAACATCTGC+TGG + chr3_1:14609051-14609070 Msa0350070:three_prime_UTR 45.0%
! GAGCCCGCATAACTTTTCAA+AGG - chr3_1:14609087-14609106 None:intergenic 45.0%
! AGGAGTCATAGTTTGAGGCA+CGG - chr3_1:14609112-14609131 None:intergenic 45.0%
TCCTGAGGAGTCATAGTTTG+AGG - chr3_1:14609117-14609136 None:intergenic 45.0%
TACTAGTGCAAGGAACTTGG+TGG - chr3_1:14609215-14609234 None:intergenic 45.0%
AACCATATTGTGCAGGCTTC+AGG + chr3_1:14609386-14609405 Msa0350070:three_prime_UTR 45.0%
ATCCTGAAGCCTGCACAATA+TGG - chr3_1:14609391-14609410 None:intergenic 45.0%
CGTGCCCAAATTAGTATGCA+AGG - chr3_1:14609476-14609495 None:intergenic 45.0%
!! GCATCAGAGATAGCTTGTTC+CGG + chr3_1:14609548-14609567 Msa0350070:three_prime_UTR 45.0%
ACATGTTGACAGCGCAATCA+AGG - chr3_1:14610407-14610426 None:intergenic 45.0%
TGATACCAGCATGGTACGTA+CGG - chr3_1:14610450-14610469 None:intergenic 45.0%
TGGTATCACACAGATATGCC+AGG + chr3_1:14610462-14610481 Msa0350070:intron 45.0%
TGTTTCAACATCAGGCATCC+TGG - chr3_1:14610483-14610502 None:intergenic 45.0%
CATAGACCTGTGGAGTTAAC+AGG + chr3_1:14610545-14610564 Msa0350070:three_prime_UTR 45.0%
GGAGTCGCACATTTCAACTA+AGG + chr3_1:14610586-14610605 Msa0350070:three_prime_UTR 45.0%
TGGACCTCAAAAGATGGACA+AGG - chr3_1:14610719-14610738 None:intergenic 45.0%
AGATGTTCTGCAGAACACGA+AGG + chr3_1:14610828-14610847 Msa0350070:three_prime_UTR 45.0%
GAGCATGGAAGGAATAAGGT+AGG - chr3_1:14610859-14610878 None:intergenic 45.0%
GAGCTTGGTTATGATCCAGA+AGG - chr3_1:14610953-14610972 None:intergenic 45.0%
! CTGGTTCTCAGGATTCTACA+TGG - chr3_1:14610982-14611001 None:intergenic 45.0%
! CAAGCATGAAACTGGTTCTC+AGG - chr3_1:14610993-14611012 None:intergenic 45.0%
AGCACTTGCGACCTTAAGTA+TGG - chr3_1:14611084-14611103 None:intergenic 45.0%
TAATTTCATAGGCTGTGGGC+GGG - chr3_1:14611625-14611644 None:intergenic 45.0%
AATGAAAGCCGTGAGGAGTA+TGG + chr3_1:14611758-14611777 Msa0350070:three_prime_UTR 45.0%
ACTCTTGACCATACTCCTCA+CGG - chr3_1:14611769-14611788 None:intergenic 45.0%
! GAGGAGTATGGTCAAGAGTT+TGG + chr3_1:14611770-14611789 Msa0350070:three_prime_UTR 45.0%
!! GAAAAAAAAATAATATTATT+TGG + chr3_1:14602539-14602558 Msa0350070:five_prime_UTR 5.0%
!!! TAAAATAATTATTATGTTTT+TGG + chr3_1:14603153-14603172 Msa0350070:intron 5.0%
!! CATAAAAAAAAAAAAAAAAA+AGG - chr3_1:14603835-14603854 None:intergenic 5.0%
!!! CTTTTTTTTTTTTTTTTTTA+TGG + chr3_1:14603833-14603852 Msa0350070:intron 5.0%
!!! AATTTTATATATGAATTTAA+TGG + chr3_1:14610899-14610918 Msa0350070:intron 5.0%
CTCTGAGCTTGTGCTGAATC+CGG + chr3_1:14602792-14602811 Msa0350070:five_prime_UTR 50.0%
TGTCGTGTCAGTGTCAGACA+AGG + chr3_1:14603269-14603288 Msa0350070:intron 50.0%
! TGGAGTGTAATGGAGATCGG+AGG + chr3_1:14604348-14604367 Msa0350070:intron 50.0%
!!! TTTTTTTTTTGGGGGGGGGG+GGG + chr3_1:14604446-14604465 Msa0350070:intron 50.0%
GTTGTTCCCATTGGCAGTCA+AGG + chr3_1:14604697-14604716 Msa0350070:intron 50.0%
GTAGAAGCCTTGACTGCCAA+TGG - chr3_1:14604707-14604726 None:intergenic 50.0%
AGGTCTATGTTGAGAGGAGC+AGG + chr3_1:14604911-14604930 Msa0350070:intron 50.0%
GGTCTATGTTGAGAGGAGCA+GGG + chr3_1:14604912-14604931 Msa0350070:intron 50.0%
TATGTTGAGAGGAGCAGGGA+TGG + chr3_1:14604916-14604935 Msa0350070:intron 50.0%
CATCCAAACGCGCAGATTCT+GGG - chr3_1:14605843-14605862 None:intergenic 50.0%
TCATCCAAACGCGCAGATTC+TGG - chr3_1:14605844-14605863 None:intergenic 50.0%
AATATGGGATGAGGGAGGTG+AGG + chr3_1:14606353-14606372 Msa0350070:CDS 50.0%
ATATGGGATGAGGGAGGTGA+GGG + chr3_1:14606354-14606373 Msa0350070:CDS 50.0%
ACAACTCGCCTCAGGATATG+TGG + chr3_1:14606545-14606564 Msa0350070:CDS 50.0%
AGCAAACTCGGTACATCAGG+AGG + chr3_1:14606660-14606679 Msa0350070:CDS 50.0%
AGCATCCCTTCCATTCTGTG+TGG - chr3_1:14606885-14606904 None:intergenic 50.0%
ACAGTTAGGACGGCAGAGTT+TGG - chr3_1:14607141-14607160 None:intergenic 50.0%
ACAACGGCATAGCTGCACAT+AGG - chr3_1:14607241-14607260 None:intergenic 50.0%
!! GTGCCCATGATGGGTAACAT+TGG + chr3_1:14607430-14607449 Msa0350070:intron 50.0%
!! GTGGGACTTGGTGTGTTCAA+TGG - chr3_1:14607676-14607695 None:intergenic 50.0%
!! AACCCACGAAACCGACTTGT+AGG + chr3_1:14608362-14608381 Msa0350070:intron 50.0%
! CACCTACAAGTCGGTTTCGT+GGG - chr3_1:14608367-14608386 None:intergenic 50.0%
! TCACCTACAAGTCGGTTTCG+TGG - chr3_1:14608368-14608387 None:intergenic 50.0%
!! ACGAAACCGACTTGTAGGTG+AGG + chr3_1:14608367-14608386 Msa0350070:intron 50.0%
!! CGAAACCGACTTGTAGGTGA+GGG + chr3_1:14608368-14608387 Msa0350070:intron 50.0%
AGCATCCCTCACCTACAAGT+CGG - chr3_1:14608376-14608395 None:intergenic 50.0%
GGGCAACCAAATCAACTCCT+AGG + chr3_1:14608907-14608926 Msa0350070:three_prime_UTR 50.0%
!! TTAGCATTGGCATAGCAGGG+AGG - chr3_1:14608990-14609009 None:intergenic 50.0%
GCCTCAAACTATGACTCCTC+AGG + chr3_1:14609113-14609132 Msa0350070:three_prime_UTR 50.0%
TGGGTGGCATATTTGAGCGA+CGG - chr3_1:14609241-14609260 None:intergenic 50.0%
TGGCACAAAGTGCAACGCAA+CGG + chr3_1:14609572-14609591 Msa0350070:three_prime_UTR 50.0%
! TTTTCCCGTACGTACCATGC+TGG + chr3_1:14610442-14610461 Msa0350070:intron 50.0%
GATACCAGCATGGTACGTAC+GGG - chr3_1:14610449-14610468 None:intergenic 50.0%
ACCAAGTGAACTTTCCCGTG+AGG + chr3_1:14610633-14610652 Msa0350070:three_prime_UTR 50.0%
ACCTCACGGGAAAGTTCACT+TGG - chr3_1:14610637-14610656 None:intergenic 50.0%
TCCTCTTGTAAGCACCTCAC+GGG - chr3_1:14610650-14610669 None:intergenic 50.0%
CTCCTCTTGTAAGCACCTCA+CGG - chr3_1:14610651-14610670 None:intergenic 50.0%
CATTGAGAGGCTTCAAGCTC+CGG - chr3_1:14610803-14610822 None:intergenic 50.0%
! AAGAAGCACGGCAATGAGCA+TGG - chr3_1:14610874-14610893 None:intergenic 50.0%
AATTTCATAGGCTGTGGGCG+GGG - chr3_1:14611624-14611643 None:intergenic 50.0%
CGATGACAATGAAAGCCGTG+AGG + chr3_1:14611751-14611770 Msa0350070:three_prime_UTR 50.0%
GTCGAGGATCCCTTTGCATT+AGG + chr3_1:14611870-14611889 Msa0350070:three_prime_UTR 50.0%
AGATTGGAGGGGAAGAGAGG+GGG - chr3_1:14602441-14602460 None:intergenic 55.0%
GAGATTGGAGGGGAAGAGAG+GGG - chr3_1:14602442-14602461 None:intergenic 55.0%
CGAGATTGGAGGGGAAGAGA+GGG - chr3_1:14602443-14602462 None:intergenic 55.0%
!!! TTTTTTTTTGGGGGGGGGGG+GGG + chr3_1:14604447-14604466 Msa0350070:intron 55.0%
CTGCCAATGGGAACAACGGA+AGG - chr3_1:14604694-14604713 None:intergenic 55.0%
AGGAGCAGGGATGGAAGTAG+AGG + chr3_1:14604925-14604944 Msa0350070:intron 55.0%
GAACCCAGAATCTGCGCGTT+TGG + chr3_1:14605837-14605856 Msa0350070:intron 55.0%
AATGGAGGACAACTCGCCTC+AGG + chr3_1:14606537-14606556 Msa0350070:CDS 55.0%
ACCTGCTGCTCGTGACCAAT+AGG - chr3_1:14607871-14607890 None:intergenic 55.0%
AGGCATCAGCATGTGCTCTC+TGG + chr3_1:14609033-14609052 Msa0350070:three_prime_UTR 55.0%
GGCATCAGCATGTGCTCTCT+GGG + chr3_1:14609034-14609053 Msa0350070:three_prime_UTR 55.0%
! GCGACGGGTTTACTAGTGCA+AGG - chr3_1:14609225-14609244 None:intergenic 55.0%
GGGTGGCATATTTGAGCGAC+GGG - chr3_1:14609240-14609259 None:intergenic 55.0%
!! CAGAGATAGCTTGTTCCGGC+TGG + chr3_1:14609552-14609571 Msa0350070:three_prime_UTR 55.0%
!! TTGGTTCGGGCTGTGCAGAA+TGG + chr3_1:14610233-14610252 Msa0350070:intron 55.0%
ACGGGCGACAGTTCGATCAA+TGG - chr3_1:14610516-14610535 None:intergenic 55.0%
! TCCCGTGAGGTGCTTACAAG+AGG + chr3_1:14610646-14610665 Msa0350070:three_prime_UTR 55.0%
AGCACGGCAATGAGCATGGA+AGG - chr3_1:14610870-14610889 None:intergenic 55.0%
!! ATGACGGGTGTGTGTGTGTG+TGG + chr3_1:14611844-14611863 Msa0350070:three_prime_UTR 55.0%
! TGACGGGTGTGTGTGTGTGT+GGG + chr3_1:14611845-14611864 Msa0350070:three_prime_UTR 55.0%
GCGAGATTGGAGGGGAAGAG+AGG - chr3_1:14602444-14602463 None:intergenic 60.0%
!!! TTTTTTTTGGGGGGGGGGGG+GGG + chr3_1:14604448-14604467 Msa0350070:intron 60.0%
GCCTATTGGTCACGAGCAGC+AGG + chr3_1:14607867-14607886 Msa0350070:three_prime_UTR 60.0%
GCGTTGCACTTTGTGCCAGC+CGG - chr3_1:14609570-14609589 None:intergenic 60.0%
GAGAGGCTTCAAGCTCCGGT+GGG - chr3_1:14610799-14610818 None:intergenic 60.0%
TGAGAGGCTTCAAGCTCCGG+TGG - chr3_1:14610800-14610819 None:intergenic 60.0%
GACGGGTGTGTGTGTGTGTG+GGG + chr3_1:14611846-14611865 Msa0350070:three_prime_UTR 60.0%
TGTGTGTGTGTGGGGAGTCG+AGG + chr3_1:14611854-14611873 Msa0350070:three_prime_UTR 60.0%
!!! TTTTTTTGGGGGGGGGGGGG+GGG + chr3_1:14604449-14604468 Msa0350070:intron 65.0%
GGGGGGGGGGACTTTATCAG+AGG + chr3_1:14604469-14604488 Msa0350070:intron 65.0%
TGGGCACGGCTTCAATCCCG+AGG + chr3_1:14609488-14609507 Msa0350070:intron 65.0%
!!! TTTTTTGGGGGGGGGGGGGG+GGG + chr3_1:14604450-14604469 Msa0350070:intron 70.0%
GAGGCGGCGGCAGCAAATGC+AGG + chr3_1:14609152-14609171 Msa0350070:three_prime_UTR 70.0%
!! TTTTTGGGGGGGGGGGGGGG+GGG + chr3_1:14604451-14604470 Msa0350070:intron 75.0%
!!! TTTTGGGGGGGGGGGGGGGG+GGG + chr3_1:14604452-14604471 Msa0350070:intron 80.0%
! TTTGGGGGGGGGGGGGGGGG+GGG + chr3_1:14604453-14604472 Msa0350070:intron 85.0%
! TTGGGGGGGGGGGGGGGGGG+GGG + chr3_1:14604454-14604473 Msa0350070:intron 90.0%
! TGGGGGGGGGGGGGGGGGGG+GGG + chr3_1:14604455-14604474 Msa0350070:intron 95.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 14602363 14612067 14602363 ID=Msa0350070;Name=Msa0350070
chr3_1 mRNA 14602363 14612067 14602363 ID=Msa0350070-mRNA-1;Parent=Msa0350070;Name=Msa0350070-mRNA-1;_AED=0.06;_eAED=0.06;_QI=530|1|1|1|0.66|0.57|7|2419|131
chr3_1 exon 14602363 14602916 14602363 ID=Msa0350070-mRNA-1:exon:3620;Parent=Msa0350070-mRNA-1
chr3_1 exon 14606342 14607005 14606342 ID=Msa0350070-mRNA-1:exon:3621;Parent=Msa0350070-mRNA-1
chr3_1 exon 14607582 14607888 14607582 ID=Msa0350070-mRNA-1:exon:3622;Parent=Msa0350070-mRNA-1
chr3_1 exon 14608736 14609422 14608736 ID=Msa0350070-mRNA-1:exon:3623;Parent=Msa0350070-mRNA-1
chr3_1 exon 14609527 14609683 14609527 ID=Msa0350070-mRNA-1:exon:3624;Parent=Msa0350070-mRNA-1
chr3_1 exon 14610475 14610849 14610475 ID=Msa0350070-mRNA-1:exon:3625;Parent=Msa0350070-mRNA-1
chr3_1 exon 14611467 14612067 14611467 ID=Msa0350070-mRNA-1:exon:3626;Parent=Msa0350070-mRNA-1
chr3_1 five_prime_UTR 14602363 14602892 14602363 ID=Msa0350070-mRNA-1:five_prime_utr;Parent=Msa0350070-mRNA-1
chr3_1 CDS 14602893 14602916 14602893 ID=Msa0350070-mRNA-1:cds;Parent=Msa0350070-mRNA-1
chr3_1 CDS 14606342 14606713 14606342 ID=Msa0350070-mRNA-1:cds;Parent=Msa0350070-mRNA-1
chr3_1 three_prime_UTR 14606714 14607005 14606714 ID=Msa0350070-mRNA-1:three_prime_utr;Parent=Msa0350070-mRNA-1
chr3_1 three_prime_UTR 14607582 14607888 14607582 ID=Msa0350070-mRNA-1:three_prime_utr;Parent=Msa0350070-mRNA-1
chr3_1 three_prime_UTR 14608736 14609422 14608736 ID=Msa0350070-mRNA-1:three_prime_utr;Parent=Msa0350070-mRNA-1
chr3_1 three_prime_UTR 14609527 14609683 14609527 ID=Msa0350070-mRNA-1:three_prime_utr;Parent=Msa0350070-mRNA-1
chr3_1 three_prime_UTR 14610475 14610849 14610475 ID=Msa0350070-mRNA-1:three_prime_utr;Parent=Msa0350070-mRNA-1
chr3_1 three_prime_UTR 14611467 14612067 14611467 ID=Msa0350070-mRNA-1:three_prime_utr;Parent=Msa0350070-mRNA-1
Gene Sequence

>Msa0350070

ATGTTTGATTGGAACGACGAAGAGCTTGCTAATATAATATGGGATGAGGGAGGTGAGGGCGATGATCATATTGTGCCGTTTCCAGAGGCAAGTGAAGATCTTAAAAACAAGAAAGAAGTGAATCAGGAACCAGCTGTGTGTAAGCTTAATAAGCGGAAGCAACCCGAGACGAAAGCTGATTTTGATGGAAAACTAGGAAGCAGTTCGAACCTTAACAATAATGGAGGACAACTCGCCTCAGGATATGTGGCAAACTCATGCTCTGACTTGTCTTTATCCAGTGCAGCTAAAATTGATCAGGATTCTCTGAGTACTGAACTTTCTAAATATCGAGGTGAACTTAGCAAACTCGGTACATCAGGAGGTGATAAAATTGCTAATTACTGGAATGATTAG
Protein sequence

>Msa0350070

MFDWNDEELANIIWDEGGEGDDHIVPFPEASEDLKNKKEVNQEPAVCKLNKRKQPETKADFDGKLGSSSNLNNNGGQLASGYVANSCSDLSLSSAAKIDQDSLSTELSKYRGELSKLGTSGGDKIANYWND*