AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0444170

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0444170 MtrunA17_Chr3g0083841 91.525 118 10 0 1 118 1 118 9.71e-72 226
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0444170 AT3G54500.7 40.157 127 71 2 1 126 1 123 4.77e-19 82.4
Msa0444170 AT3G54500.5 40.157 127 71 2 1 126 1 123 4.77e-19 82.4
Msa0444170 AT3G54500.4 43.902 123 64 3 1 122 1 119 3.20e-18 79.7
Msa0444170 AT3G54500.3 40.650 123 68 2 1 122 1 119 3.93e-18 79.7
Msa0444170 AT3G54500.1 42.982 114 60 2 1 113 1 110 8.09e-18 78.6

Find 207 sgRNAs with CRISPR-Local

Find 664 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCATAATCCTAGACTATTTA+TGG 0.053603 3_3:+17016474 None:intergenic
CTTAACTACGAAAAGATTTC+TGG 0.141989 3_3:-17020375 Msa0444170:three_prime_UTR
TTCAGCTTGCTAATATAATA+TGG 0.167194 3_3:-17021805 Msa0444170:intron
CTTATGCTTATTTGCGAAAT+TGG 0.190289 3_3:+17025738 None:intergenic
GTCAATACTTGGCATGATTT+TGG 0.190706 3_3:-17016610 Msa0444170:three_prime_UTR
CTAATTTAAACTAATTTATT+AGG 0.190895 3_3:-17025676 Msa0444170:five_prime_UTR
ATGATGTTCTGATATGTTTC+AGG 0.210886 3_3:+17019216 None:intergenic
CCACAGCCTATGAAATTAAT+AGG 0.214453 3_3:-17016519 Msa0444170:three_prime_UTR
TCATCTCCCTCTTCAATTCT+TGG 0.243129 3_3:-17019261 Msa0444170:three_prime_UTR
AGCAATGATGACCCTATATT+TGG 0.245263 3_3:-17020567 Msa0444170:three_prime_UTR
CATAGACCTGTGGAGTTAAC+AGG 0.252015 3_3:-17017601 Msa0444170:three_prime_UTR
GAAGGATAACCATGATTTAA+TGG 0.253110 3_3:+17016224 None:intergenic
CAAGTCCCACTGATGCTTTA+AGG 0.257456 3_3:-17020461 Msa0444170:three_prime_UTR
TGTCAAACATTTATACAATT+AGG 0.260480 3_3:+17021290 None:intergenic
CTACGTCTACAGTTTGATTC+TGG 0.271489 3_3:-17025363 Msa0444170:five_prime_UTR
TTTGCATTAGGTATCAAAAT+TGG 0.273201 3_3:-17016264 Msa0444170:three_prime_UTR
AGGCATCAGCATGTGCTCTC+TGG 0.298254 3_3:-17019114 Msa0444170:three_prime_UTR
AACCATATTGTGCAGGCTTC+AGG 0.302174 3_3:-17018761 Msa0444170:three_prime_UTR
GGGTGACTGTCATTCTTATA+GGG 0.308386 3_3:-17016680 Msa0444170:three_prime_UTR
GTGATAAAATTGCTAATTAC+TGG 0.313478 3_3:-17021460 Msa0444170:CDS
TTAGTTTAAATTAGTTTGAT+AGG 0.317890 3_3:+17025685 None:intergenic
AGGGTGACTGTCATTCTTAT+AGG 0.325659 3_3:-17016681 Msa0444170:three_prime_UTR
TTTAGCCCTATTAATTTCAT+AGG 0.326093 3_3:+17016513 None:intergenic
GAATCATCTTGTTCAATTAG+AGG 0.333648 3_3:+17018826 None:intergenic
AGACTTGCATGGCCAAATAT+AGG 0.334235 3_3:+17020555 None:intergenic
ACATTGGGATATGAGGGTTT+GGG 0.351400 3_3:+17025818 None:intergenic
CCATAAATAGTCTAGGATTA+TGG 0.353557 3_3:-17016474 Msa0444170:three_prime_UTR
AGTTTCAGTCAGGAAATCTT+AGG 0.358237 3_3:-17019134 Msa0444170:three_prime_UTR
ATAAAATACATTGGGATATG+AGG 0.358802 3_3:+17025811 None:intergenic
TACATTGGGATATGAGGGTT+TGG 0.362187 3_3:+17025817 None:intergenic
TCAGGTCCTAGGAGTTGATT+TGG 0.365895 3_3:+17019234 None:intergenic
GAGGAGTATGGTCAAGAGTT+TGG 0.374183 3_3:-17016376 Msa0444170:three_prime_UTR
ACAAGAGGGGAAAGATTTGC+AGG 0.375758 3_3:-17019361 Msa0444170:three_prime_UTR
GCGAAATTGGAGGGGAAGAG+AGG 0.381592 3_3:+17025751 None:intergenic
AGGAAATTATTCTGACAAAC+TGG 0.382761 3_3:-17017581 Msa0444170:three_prime_UTR
CATTGAGAGGCTTCAAGCTC+CGG 0.383942 3_3:+17017346 None:intergenic
ATCCTGAAGCCTGCACAATA+TGG 0.385534 3_3:+17018759 None:intergenic
TTCGTCTCTGTTTCAACATC+AGG 0.385600 3_3:+17017658 None:intergenic
CATCTCCCTCTTCAATTCTT+GGG 0.389661 3_3:-17019260 Msa0444170:three_prime_UTR
ATCAACAACTTTCTCACATT+GGG 0.390601 3_3:-17017462 Msa0444170:three_prime_UTR
AAGGAATAGATCAGGGCCTT+TGG 0.396684 3_3:-17020442 Msa0444170:three_prime_UTR
AAATTGGAGGGGAAGAGAGG+GGG 0.399449 3_3:+17025754 None:intergenic
TCAGCTTGCTAATATAATAT+GGG 0.399569 3_3:-17021804 Msa0444170:intron
TGCCGATGAAGGTAAAGAAC+AGG 0.402038 3_3:-17021223 Msa0444170:three_prime_UTR
AAACAAGAAAGAAGTGAATC+AGG 0.402238 3_3:-17021720 Msa0444170:CDS
AGTTCGAACCTTAACAATAA+TGG 0.402335 3_3:-17021623 Msa0444170:CDS
AATGAAAGCCGTGAGGAGTA+TGG 0.402841 3_3:-17016388 Msa0444170:three_prime_UTR
TCAACTATTGACAGTCTTCA+AGG 0.407629 3_3:+17016422 None:intergenic
GAGGCGGCGGCAGCAAATGC+AGG 0.413237 3_3:-17018995 Msa0444170:three_prime_UTR
AACATTTAGCCATTAAATCA+TGG 0.418684 3_3:-17016233 Msa0444170:three_prime_UTR
AATTGGAGGGGAAGAGAGGG+GGG 0.419076 3_3:+17025755 None:intergenic
GTTGGAATTCTCCACGTGTA+AGG 0.421633 3_3:-17025638 Msa0444170:five_prime_UTR
TGTGTTAGCATTGGCATAGC+AGG 0.424322 3_3:+17019156 None:intergenic
GTCGAGGATCCCTTTGCATT+AGG 0.425641 3_3:-17016276 Msa0444170:three_prime_UTR
CATTGGGATATGAGGGTTTG+GGG 0.426394 3_3:+17025819 None:intergenic
GACTTGCATGGCCAAATATA+GGG 0.428786 3_3:+17020556 None:intergenic
TCAAAATCAGCTTTCGTCTC+GGG 0.429670 3_3:+17021662 None:intergenic
CAGGTCTATGAAAGAGTAAA+CGG 0.431253 3_3:+17017614 None:intergenic
GTTGTCCTCCATTATTGTTA+AGG 0.431483 3_3:+17021615 None:intergenic
TAAAACGAAGGTGCCACATA+TGG 0.437704 3_3:+17019189 None:intergenic
CTTAGCAAACTCGGTACATC+AGG 0.438169 3_3:-17021485 Msa0444170:CDS
TTAAGATCTTCACTTGCCTC+TGG 0.438774 3_3:+17021743 None:intergenic
AAGAAAGCAGTAGCCAAAAC+AGG 0.439156 3_3:-17018484 Msa0444170:intron
TCCTGAGGAGTCATAGTTTG+AGG 0.439185 3_3:+17019033 None:intergenic
TGAAGACTGTCAATAGTTGA+TGG 0.440651 3_3:-17016419 Msa0444170:three_prime_UTR
CTAGAATGACTTTGAATTTG+TGG 0.441648 3_3:+17018889 None:intergenic
ACCCTGTTCTTTACCTTCAT+CGG 0.444276 3_3:+17021221 None:intergenic
TCAGAAACAACAGCAAGTAC+TGG 0.445349 3_3:-17018959 Msa0444170:three_prime_UTR
GGCATCAGCATGTGCTCTCT+GGG 0.448646 3_3:-17019113 Msa0444170:three_prime_UTR
TTGCATTTCAAGTCAATACT+TGG 0.450375 3_3:-17016621 Msa0444170:three_prime_UTR
ATCAAAATCAGCTTTCGTCT+CGG 0.454688 3_3:+17021661 None:intergenic
ACCTGCTGCTCGTGACCAAT+AGG 0.454851 3_3:+17020279 None:intergenic
GATGCTTTAAGGAATAGATC+AGG 0.456030 3_3:-17020450 Msa0444170:three_prime_UTR
CACAGCCTATGAAATTAATA+GGG 0.457054 3_3:-17016518 Msa0444170:three_prime_UTR
AAGTAATCTAAAATCTTAGA+AGG 0.460080 3_3:+17016206 None:intergenic
GCATCAGAGATAGCTTGTTC+CGG 0.460936 3_3:-17018598 Msa0444170:three_prime_UTR
CTCTGAGCTTGTGCTGAATC+CGG 0.465928 3_3:-17025403 Msa0444170:five_prime_UTR
CCTATTAATTTCATAGGCTG+TGG 0.465987 3_3:+17016519 None:intergenic
CTTAAAGCATCAGTGGGACT+TGG 0.466899 3_3:+17020462 None:intergenic
GAAATTGGAGGGGAAGAGAG+GGG 0.467171 3_3:+17025753 None:intergenic
TAATTTCATAGGCTGTGGGC+GGG 0.467199 3_3:+17016524 None:intergenic
GTTTACTAGTGCAAGGAACT+TGG 0.467995 3_3:+17018932 None:intergenic
TCTTAGTCTGATCCATAGGT+TGG 0.470108 3_3:+17017410 None:intergenic
TTTACCTGAAAATCCGATCA+AGG 0.472813 3_3:+17021154 None:intergenic
CAGAGATAGCTTGTTCCGGC+TGG 0.473135 3_3:-17018594 Msa0444170:three_prime_UTR
TGGAAGAAATAAAATACATT+GGG 0.475165 3_3:+17025803 None:intergenic
CAGTGCAGCTAAAATTGATC+AGG 0.475398 3_3:-17021546 Msa0444170:CDS
CGAAATTGGAGGGGAAGAGA+GGG 0.477000 3_3:+17025752 None:intergenic
TAAAATACATTGGGATATGA+GGG 0.477019 3_3:+17025812 None:intergenic
TGTTTCAACATCAGGCATCC+TGG 0.477705 3_3:+17017666 None:intergenic
TAGAATGACTTTGAATTTGT+GGG 0.479013 3_3:+17018890 None:intergenic
AACATGATACCAAGATTCAA+TGG 0.479741 3_3:+17016141 None:intergenic
ACGGGCGACAGTTCGATCAA+TGG 0.480071 3_3:+17017633 None:intergenic
TCTTCACTTGCCTCTGGAAA+CGG 0.482423 3_3:+17021749 None:intergenic
TTGAAGAAACCATATTGTGC+AGG 0.486319 3_3:-17018768 Msa0444170:three_prime_UTR
AACATTTATACAATTAGGAA+TGG 0.486458 3_3:+17021295 None:intergenic
GCCTATTGGTCACGAGCAGC+AGG 0.486485 3_3:-17020280 Msa0444170:intron
TGCTTATTTGCGAAATTGGA+GGG 0.489014 3_3:+17025742 None:intergenic
CTGTTCTTAGTCTGATCCAT+AGG 0.489070 3_3:+17017406 None:intergenic
TTATTAAGCTTACACACAGC+TGG 0.490921 3_3:+17021695 None:intergenic
TGCAAAATCGACAAAGAAAA+CGG 0.495430 3_3:+17025581 None:intergenic
TTGATAATTCTGATGACCTC+TGG 0.501202 3_3:-17020533 Msa0444170:three_prime_UTR
AATCAACAACTTTCTCACAT+TGG 0.505289 3_3:-17017463 Msa0444170:three_prime_UTR
TCTGATATGTTTCAGGTCCT+AGG 0.507149 3_3:+17019223 None:intergenic
GGGTGGCATATTTGAGCGAC+GGG 0.507311 3_3:+17018910 None:intergenic
GTGGAAGAAATAAAATACAT+TGG 0.508139 3_3:+17025802 None:intergenic
GCGTTGCACTTTGTGCCAGC+CGG 0.508304 3_3:+17018579 None:intergenic
ATATGGGATGAGGGAGGTGA+GGG 0.508521 3_3:-17021788 Msa0444170:CDS
TGCTAATATAATATGGGATG+AGG 0.509213 3_3:-17021798 Msa0444170:CDS
ATTCAAAGTCATTCTAGTGA+TGG 0.509606 3_3:-17018883 Msa0444170:three_prime_UTR
TAATTTCCTGTTAACTCCAC+AGG 0.509907 3_3:+17017595 None:intergenic
ATGCTTATTTGCGAAATTGG+AGG 0.513650 3_3:+17025741 None:intergenic
TTGGGATATGAGGGTTTGGG+GGG 0.520694 3_3:+17025821 None:intergenic
TGAATGTAACCATTGAATCT+TGG 0.522300 3_3:-17016150 Msa0444170:three_prime_UTR
GGAGATAGAAGTAAGCCTAT+TGG 0.522652 3_3:-17020294 Msa0444170:three_prime_UTR
GAACATCTTTCTTCATTGAG+AGG 0.523735 3_3:+17017333 None:intergenic
ATTGGGATATGAGGGTTTGG+GGG 0.524271 3_3:+17025820 None:intergenic
TTCAAAGTCATTCTAGTGAT+GGG 0.526023 3_3:-17018882 Msa0444170:three_prime_UTR
CTTTAATCCATAAATAGTCT+AGG 0.527262 3_3:-17016481 Msa0444170:three_prime_UTR
CAGAAACAACAGCAAGTACT+GGG 0.527304 3_3:-17018958 Msa0444170:three_prime_UTR
GCCTCAAACTATGACTCCTC+AGG 0.528024 3_3:-17019034 Msa0444170:three_prime_UTR
GAGAAAGAGAAAGAATAATA+CGG 0.528553 3_3:+17025492 None:intergenic
TGAGAGGCTTCAAGCTCCGG+TGG 0.529498 3_3:+17017349 None:intergenic
AATTTCATAGGCTGTGGGCG+GGG 0.530106 3_3:+17016525 None:intergenic
ATGCTAACACAGTTTCAGTC+AGG 0.532527 3_3:-17019144 Msa0444170:three_prime_UTR
AATGGAGGACAACTCGCCTC+AGG 0.533027 3_3:-17021605 Msa0444170:CDS
ACACACAACCGCTGATAATG+TGG 0.533964 3_3:-17020325 Msa0444170:three_prime_UTR
TGTTCTTCTTTGATTTCCAA+AGG 0.534602 3_3:+17020426 None:intergenic
ACAGAAGAGACCACACAGAA+TGG 0.537046 3_3:-17021270 Msa0444170:three_prime_UTR
CTCCTCTTGTAAGCACCTCA+CGG 0.538906 3_3:+17017498 None:intergenic
CGAGGTGAACTTAGCAAACT+CGG 0.541278 3_3:-17021494 Msa0444170:CDS
GTGGGACTTGGTGTGTTCAA+TGG 0.542667 3_3:+17020474 None:intergenic
AAGAGACCACACAGAATGGA+AGG 0.545204 3_3:-17021266 Msa0444170:three_prime_UTR
GGGCAACCAAATCAACTCCT+AGG 0.545576 3_3:-17019240 Msa0444170:three_prime_UTR
AGGTCTATGAAAGAGTAAAC+GGG 0.548734 3_3:+17017615 None:intergenic
AATATGGGATGAGGGAGGTG+AGG 0.553046 3_3:-17021789 Msa0444170:CDS
TCTGGGTATGAAACATCTGC+TGG 0.554617 3_3:-17019096 Msa0444170:three_prime_UTR
TCCTCTTGTAAGCACCTCAC+GGG 0.556291 3_3:+17017499 None:intergenic
TGGGTGGCATATTTGAGCGA+CGG 0.557181 3_3:+17018909 None:intergenic
GGAGTCGCACATTTCAACTA+AGG 0.558889 3_3:-17017560 Msa0444170:three_prime_UTR
CTATTAATTTCATAGGCTGT+GGG 0.559216 3_3:+17016520 None:intergenic
ACCTCACGGGAAAGTTCACT+TGG 0.559508 3_3:+17017512 None:intergenic
TCCCGTGAGGTGCTTACAAG+AGG 0.560420 3_3:-17017500 Msa0444170:three_prime_UTR
TACTAGTGCAAGGAACTTGG+TGG 0.564162 3_3:+17018935 None:intergenic
ATAGGTTGGACCTCAAAAGA+TGG 0.564515 3_3:+17017424 None:intergenic
ACAACTCGCCTCAGGATATG+TGG 0.569743 3_3:-17021597 Msa0444170:CDS
GACTGAAACTGTGTTAGCAT+TGG 0.570733 3_3:+17019147 None:intergenic
GCTGATAATGTGGAATGTGC+TGG 0.572272 3_3:-17020315 Msa0444170:three_prime_UTR
TTAATTTCATAGGCTGTGGG+CGG 0.572409 3_3:+17016523 None:intergenic
GATTATGACTGGGCTAACAT+AGG 0.578592 3_3:-17021189 Msa0444170:three_prime_UTR
TTGGTCTTCTTCAGCAACAT+CGG 0.578822 3_3:-17019325 Msa0444170:three_prime_UTR
GAACATCATAAATCCATATG+TGG 0.579709 3_3:-17019202 Msa0444170:three_prime_UTR
AGTCCTTTGAAAAGTTATGC+GGG 0.588913 3_3:-17019066 Msa0444170:three_prime_UTR
GCTTCAGGATGTTATATCAA+AGG 0.593187 3_3:-17018746 Msa0444170:intron
TTTACTCTTTCATAGACCTG+TGG 0.593278 3_3:-17017611 Msa0444170:three_prime_UTR
CAGAATTATCAAGACTTGCA+TGG 0.593394 3_3:+17020544 None:intergenic
GCTAATATAATATGGGATGA+GGG 0.595943 3_3:-17021797 Msa0444170:CDS
AAAGTCAAAGATAAAACAAG+AGG 0.596219 3_3:-17019376 Msa0444170:three_prime_UTR
ATGTAAGTAAACTGTGAACA+TGG 0.597596 3_3:-17016325 Msa0444170:three_prime_UTR
TGGTATCACACAGATATGCC+AGG 0.598969 3_3:-17017684 Msa0444170:intron
TGGTTGCCCAAGAATTGAAG+AGG 0.600589 3_3:+17019254 None:intergenic
TCTATTCCTTAAAGCATCAG+TGG 0.602291 3_3:+17020455 None:intergenic
GAGTCCTTTGAAAAGTTATG+CGG 0.609075 3_3:-17019067 Msa0444170:three_prime_UTR
GCTTATTTGCGAAATTGGAG+GGG 0.609890 3_3:+17025743 None:intergenic
GGTGACTGTCATTCTTATAG+GGG 0.610528 3_3:-17016679 Msa0444170:three_prime_UTR
AGCATCCCTTCCATTCTGTG+TGG 0.615267 3_3:+17021260 None:intergenic
GTGTTAGCATTGGCATAGCA+GGG 0.616825 3_3:+17019157 None:intergenic
AAGTCAAAGATAAAACAAGA+GGG 0.616841 3_3:-17019375 Msa0444170:three_prime_UTR
ATGCTTTAAGGAATAGATCA+GGG 0.618514 3_3:-17020449 Msa0444170:three_prime_UTR
GGTTGCCCAAGAATTGAAGA+GGG 0.618924 3_3:+17019255 None:intergenic
AGAATTAGCTCAATCATCGC+CGG 0.619218 3_3:+17025384 None:intergenic
TCATATTGTGCCGTTTCCAG+AGG 0.620272 3_3:-17021759 Msa0444170:CDS
ACTCTTGACCATACTCCTCA+CGG 0.621750 3_3:+17016380 None:intergenic
AGCAAACTCGGTACATCAGG+AGG 0.624925 3_3:-17021482 Msa0444170:CDS
AAACTGTGAACATGGATGAC+GGG 0.625718 3_3:-17016317 Msa0444170:three_prime_UTR
CTATTCCTTAAAGCATCAGT+GGG 0.628176 3_3:+17020456 None:intergenic
GCGACGGGTTTACTAGTGCA+AGG 0.628579 3_3:+17018925 None:intergenic
TGGCACAAAGTGCAACGCAA+CGG 0.633011 3_3:-17018574 Msa0444170:three_prime_UTR
GGAGATGATTGTAACACAGA+AGG 0.635671 3_3:+17019276 None:intergenic
AGAAAATGCATCTAACCCAC+CGG 0.636962 3_3:-17017365 Msa0444170:three_prime_UTR
ACTAAGAACAGTCTCAGCAT+AGG 0.640882 3_3:-17017394 Msa0444170:three_prime_UTR
AGGAGTCATAGTTTGAGGCA+CGG 0.641324 3_3:+17019038 None:intergenic
GTTTGATTGGAACGACGAAG+AGG 0.641530 3_3:-17025300 Msa0444170:intron
GAGAGGCTTCAAGCTCCGGT+GGG 0.642429 3_3:+17017350 None:intergenic
AATGCAATCAATGTGAAATG+AGG 0.642544 3_3:+17016637 None:intergenic
AGCACATTCCACATTATCAG+CGG 0.644887 3_3:+17020317 None:intergenic
GTGACTGTCATTCTTATAGG+GGG 0.654649 3_3:-17016678 Msa0444170:three_prime_UTR
CTGTGTGTAAGCTTAATAAG+CGG 0.656424 3_3:-17021691 Msa0444170:CDS
ATCGACAAAGAAAACGGTAA+CGG 0.660108 3_3:+17025587 None:intergenic
TCGAACCTTAACAATAATGG+AGG 0.660791 3_3:-17021620 Msa0444170:CDS
AATATAATATGGGATGAGGG+AGG 0.660916 3_3:-17021794 Msa0444170:CDS
ACTGAACTTTCTAAATATCG+AGG 0.661650 3_3:-17021512 Msa0444170:CDS
GCCGATGAAGGTAAAGAACA+GGG 0.663411 3_3:-17021222 Msa0444170:three_prime_UTR
AGAGACCACACAGAATGGAA+GGG 0.665511 3_3:-17021265 Msa0444170:three_prime_UTR
AATGACTTTGAATTTGTGGG+TGG 0.666637 3_3:+17018893 None:intergenic
TAAACTGTGAACATGGATGA+CGG 0.670853 3_3:-17016318 Msa0444170:three_prime_UTR
TGAGTTTGCCACATATCCTG+AGG 0.676069 3_3:+17021589 None:intergenic
AGTCAAAGATAAAACAAGAG+GGG 0.681406 3_3:-17019374 Msa0444170:three_prime_UTR
AAAAGTACCAGTTGAAAACA+CGG 0.682824 3_3:-17019401 Msa0444170:three_prime_UTR
TGGACCTCAAAAGATGGACA+AGG 0.698672 3_3:+17017430 None:intergenic
ACCAAGTGAACTTTCCCGTG+AGG 0.703337 3_3:-17017513 Msa0444170:three_prime_UTR
AGAGATGAAAGCCTTACACG+TGG 0.707131 3_3:+17025627 None:intergenic
AGATGTTCTGCAGAACACGA+AGG 0.707819 3_3:-17017318 Msa0444170:intron
TCACATCTTTAGCAGACCAG+AGG 0.711109 3_3:+17020517 None:intergenic
GGGAGGTTACCATAAAACGA+AGG 0.728180 3_3:+17019177 None:intergenic
CGATGACAATGAAAGCCGTG+AGG 0.730153 3_3:-17016395 Msa0444170:three_prime_UTR
TTAGCATTGGCATAGCAGGG+AGG 0.754765 3_3:+17019160 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTAATTTAAACTAATTTATT+AGG - chr3_3:17016256-17016275 Msa0444170:three_prime_UTR 10.0%
!!! TTTTTTTTTGTATTTAATCT+TGG - chr3_3:17016681-17016700 Msa0444170:three_prime_UTR 10.0%
!! TAAAAAAAAAAAAAAAAAGG+CGG + chr3_3:17017622-17017641 None:intergenic 10.0%
!! CCATAAAAAAAAAAAAAAAA+AGG + chr3_3:17017625-17017644 None:intergenic 10.0%
!!! CCTTTTTTTTTTTTTTTTTA+TGG - chr3_3:17017622-17017641 Msa0444170:three_prime_UTR 10.0%
!!! ATATACATCTTTTTTTTTTT+TGG - chr3_3:17018226-17018245 Msa0444170:intron 10.0%
!!! TATACATCTTTTTTTTTTTT+GGG - chr3_3:17018227-17018246 Msa0444170:intron 10.0%
!! TTACATATTAACAATAAAAA+TGG + chr3_3:17019226-17019245 None:intergenic 10.0%
!! ATAATATCATTGTTTAATAA+TGG - chr3_3:17020098-17020117 Msa0444170:intron 10.0%
!! TATTAGATATAGAATAATAT+AGG + chr3_3:17020812-17020831 None:intergenic 10.0%
!! AAAAAAATAAATAAAAGTTC+CGG - chr3_3:17021238-17021257 Msa0444170:three_prime_UTR 10.0%
!!! AGATTATCAAATAAATTTTA+TGG + chr3_3:17023903-17023922 None:intergenic 10.0%
!!! CATAATTTTTATTAAGAAAT+AGG - chr3_3:17025581-17025600 Msa0444170:five_prime_UTR 10.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr3_3:17018247-17018266 Msa0444170:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr3_3:17018247-17018266 Msa0444170:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr3_3:17018247-17018266 Msa0444170:intron 100.0%
!!! TTAGTTTAAATTAGTTTGAT+AGG + chr3_3:17016250-17016269 None:intergenic 15.0%
!! AGGAAAAAAAAAATATTAGT+TGG - chr3_3:17016276-17016295 Msa0444170:three_prime_UTR 15.0%
!!! ATTTTTAAGAAATGTTTGAT+TGG - chr3_3:17016619-17016638 Msa0444170:three_prime_UTR 15.0%
!!! TATTTATTTTGTGTTTTGTT+CGG - chr3_3:17016756-17016775 Msa0444170:intron 15.0%
!!! CAATTATAATTTGATTTTTG+AGG - chr3_3:17017288-17017307 Msa0444170:intron 15.0%
!!! ATACATCTTTTTTTTTTTTG+GGG - chr3_3:17018228-17018247 Msa0444170:intron 15.0%
!! TTACTATATGTAATAAACAA+AGG + chr3_3:17018305-17018324 None:intergenic 15.0%
!!! ATAAAAAAGTATTGCATATA+AGG + chr3_3:17019052-17019071 None:intergenic 15.0%
!! TTACATATTTACAACAAAAA+TGG + chr3_3:17019183-17019202 None:intergenic 15.0%
!!! ATTATTGGAACAATATTTTA+TGG - chr3_3:17019322-17019341 Msa0444170:three_prime_UTR 15.0%
!!! TTATTGGAACAATATTTTAT+GGG - chr3_3:17019323-17019342 Msa0444170:three_prime_UTR 15.0%
!!! GGTTAATTCTAAAAAATTTT+GGG - chr3_3:17019344-17019363 Msa0444170:three_prime_UTR 15.0%
!!! AAAAATATTGACTTCAAAAT+AGG - chr3_3:17019417-17019436 Msa0444170:intron 15.0%
!!! AAAATATTGACTTCAAAATA+GGG - chr3_3:17019418-17019437 Msa0444170:intron 15.0%
!!! TAGTGATTGAAAATTTTATA+GGG - chr3_3:17019449-17019468 Msa0444170:intron 15.0%
!! TTAAACAATGATATTATTGA+CGG + chr3_3:17020095-17020114 None:intergenic 15.0%
!!! CATTATTTTTCATATTATGA+CGG + chr3_3:17020590-17020609 None:intergenic 15.0%
!! AAAATAACAGAATAAATTCT+TGG + chr3_3:17022489-17022508 None:intergenic 15.0%
!!! TGGATATCAAATAAATTTTA+TGG + chr3_3:17023883-17023902 None:intergenic 15.0%
!!! TAAACCTATGATTTTTATTT+TGG - chr3_3:17025078-17025097 Msa0444170:intron 15.0%
!! AAATCCAAAATAAAAATCAT+AGG + chr3_3:17025085-17025104 None:intergenic 15.0%
!!! TTTTATTTTGGATTTAAGTA+TGG - chr3_3:17025090-17025109 Msa0444170:intron 15.0%
!!! TTTATTTTGGATTTAAGTAT+GGG - chr3_3:17025091-17025110 Msa0444170:intron 15.0%
!!! ACTTATTTTTCAAACATTAT+CGG + chr3_3:17025367-17025386 None:intergenic 15.0%
!! TGGAAGAAATAAAATACATT+GGG + chr3_3:17016132-17016151 None:intergenic 20.0%
!!! TTTGGTAATTAAAGATCTTA+AGG - chr3_3:17016910-17016929 Msa0444170:intron 20.0%
!!! TCATTTTCTCAAACTATTAT+CGG + chr3_3:17016968-17016987 None:intergenic 20.0%
!! GAATTATAAGAGTTGTTAAA+TGG + chr3_3:17017586-17017605 None:intergenic 20.0%
!! TTATGGTAATAGCATTATTT+AGG - chr3_3:17017639-17017658 Msa0444170:three_prime_UTR 20.0%
!! ATATCAACTATATTCAACTT+CGG + chr3_3:17017842-17017861 None:intergenic 20.0%
!!! AAGTTGAATATAGTTGATAT+AGG - chr3_3:17017842-17017861 Msa0444170:intron 20.0%
!!! ATAGTTGATATAGGTTTATA+TGG - chr3_3:17017851-17017870 Msa0444170:intron 20.0%
!!! TACATCTTTTTTTTTTTTGG+GGG - chr3_3:17018229-17018248 Msa0444170:intron 20.0%
!!! TTATGTCCATGTTTTATAAA+AGG + chr3_3:17018356-17018375 None:intergenic 20.0%
!! TATTCCCTAAAAAAAAAGTA+CGG - chr3_3:17018405-17018424 Msa0444170:intron 20.0%
!! AATTACAATTCATTATCTGT+GGG + chr3_3:17018893-17018912 None:intergenic 20.0%
!!! GCAATACTTTTTTATATGTA+TGG - chr3_3:17019057-17019076 Msa0444170:three_prime_UTR 20.0%
!! TATATCCAATATATTGTTTG+TGG - chr3_3:17019107-17019126 Msa0444170:three_prime_UTR 20.0%
!! ATATCCAATATATTGTTTGT+GGG - chr3_3:17019108-17019127 Msa0444170:three_prime_UTR 20.0%
!! AATATTGTTCCAATAATTAC+AGG + chr3_3:17019319-17019338 None:intergenic 20.0%
!!! GGGTTAATTCTAAAAAATTT+TGG - chr3_3:17019343-17019362 Msa0444170:three_prime_UTR 20.0%
!!! GTAGTGATTGAAAATTTTAT+AGG - chr3_3:17019448-17019467 Msa0444170:intron 20.0%
!! AAAAATTTCAACACTAAACT+AGG - chr3_3:17019755-17019774 Msa0444170:intron 20.0%
!! AACATTTATACAATTAGGAA+TGG + chr3_3:17020640-17020659 None:intergenic 20.0%
!! TGTCAAACATTTATACAATT+AGG + chr3_3:17020645-17020664 None:intergenic 20.0%
!! ATAAAAGTCTTGGATTTATT+TGG - chr3_3:17020868-17020887 Msa0444170:intron 20.0%
!! AAAATCATTCAAAGTGAAAA+AGG - chr3_3:17021063-17021082 Msa0444170:intron 20.0%
!!! AGTTTATCTTTTGGAAAATT+TGG + chr3_3:17021898-17021917 None:intergenic 20.0%
!! TTTCCAAAAGATAAACTTAT+TGG - chr3_3:17021901-17021920 Msa0444170:intron 20.0%
!! TTCCAAAAGATAAACTTATT+GGG - chr3_3:17021902-17021921 Msa0444170:intron 20.0%
!!! TCTGATACCATTTTAAATTT+AGG - chr3_3:17022114-17022133 Msa0444170:intron 20.0%
!! GTAAGATCCTAAATTTAAAA+TGG + chr3_3:17022124-17022143 None:intergenic 20.0%
!!! TAAATAAGAGTATAAGACAT+TGG - chr3_3:17023603-17023622 Msa0444170:intron 20.0%
!! TAAAATTGAATAAAGAAGCA+CGG + chr3_3:17024672-17024691 None:intergenic 20.0%
!!! GTTTTAAACGATATGTATAT+TGG - chr3_3:17024829-17024848 Msa0444170:intron 20.0%
!! TAAATCATTGTTGCATAATA+AGG + chr3_3:17025033-17025052 None:intergenic 20.0%
!! AATTCAAGTAATTGATATGA+AGG + chr3_3:17025228-17025247 None:intergenic 20.0%
!!! TATCAATTACTTGAATTTTC+AGG - chr3_3:17025231-17025250 Msa0444170:intron 20.0%
!!! ATCAATTACTTGAATTTTCA+GGG - chr3_3:17025232-17025251 Msa0444170:intron 20.0%
!!! AAGTAATCTAAAATCTTAGA+AGG + chr3_3:17025729-17025748 None:intergenic 20.0%
!!! TTCTAAGATTTTAGATTACT+TGG - chr3_3:17025728-17025747 Msa0444170:five_prime_UTR 20.0%
!!! ATTTGTCTAAAATTTTGCAT+AGG - chr3_3:17025822-17025841 Msa0444170:five_prime_UTR 20.0%
! TAAAATACATTGGGATATGA+GGG + chr3_3:17016123-17016142 None:intergenic 25.0%
! ATAAAATACATTGGGATATG+AGG + chr3_3:17016124-17016143 None:intergenic 25.0%
! GTGGAAGAAATAAAATACAT+TGG + chr3_3:17016133-17016152 None:intergenic 25.0%
! GAGAAAGAGAAAGAATAATA+CGG + chr3_3:17016443-17016462 None:intergenic 25.0%
!! TAGTTGGAAAATTTGATGAT+TGG - chr3_3:17016857-17016876 Msa0444170:intron 25.0%
!! TATAGTTAAGGAGCAATTTT+TGG - chr3_3:17017079-17017098 Msa0444170:intron 25.0%
!! ATAGTTAAGGAGCAATTTTT+GGG - chr3_3:17017080-17017099 Msa0444170:intron 25.0%
! TTATACTAAATAGCATATCG+TGG - chr3_3:17017510-17017529 Msa0444170:three_prime_UTR 25.0%
! TTATAAGAGTTGTTAAATGG+CGG + chr3_3:17017583-17017602 None:intergenic 25.0%
!!! TGAAAGTATTTTTTCAGATG+TGG - chr3_3:17017758-17017777 Msa0444170:intron 25.0%
!! TAATAAAAGAGCATACAAGA+TGG - chr3_3:17018062-17018081 Msa0444170:intron 25.0%
! TGACTACAAAACTTGATTTA+GGG + chr3_3:17018121-17018140 None:intergenic 25.0%
! ATGACTACAAAACTTGATTT+AGG + chr3_3:17018122-17018141 None:intergenic 25.0%
!!! TAAATCAAGTTTTGTAGTCA+TGG - chr3_3:17018121-17018140 Msa0444170:intron 25.0%
!! TGATTTTTCTCATCTTTCTT+TGG + chr3_3:17018188-17018207 None:intergenic 25.0%
!!! ACATCTTTTTTTTTTTTGGG+GGG - chr3_3:17018230-17018249 Msa0444170:intron 25.0%
!! ATCAGTCCTTTTATAAAACA+TGG - chr3_3:17018347-17018366 Msa0444170:intron 25.0%
! TTATAAAACATGGACATAAG+CGG - chr3_3:17018357-17018376 Msa0444170:intron 25.0%
!!! CTATCCGTACTTTTTTTTTA+GGG + chr3_3:17018412-17018431 None:intergenic 25.0%
!!! TCTATCCGTACTTTTTTTTT+AGG + chr3_3:17018413-17018432 None:intergenic 25.0%
! ATAACAATGCTCAAAAATCA+TGG + chr3_3:17018464-17018483 None:intergenic 25.0%
!!! TGCAGCTCTATTTTTTTTTT+GGG - chr3_3:17018553-17018572 Msa0444170:three_prime_UTR 25.0%
!! AAATGTTTAAAGTTCATGCA+TGG - chr3_3:17018580-17018599 Msa0444170:three_prime_UTR 25.0%
! TAACCAGTAGAGAAAAAATA+AGG - chr3_3:17018862-17018881 Msa0444170:three_prime_UTR 25.0%
! CAATTACAATTCATTATCTG+TGG + chr3_3:17018894-17018913 None:intergenic 25.0%
! GATAATGAATTGTAATTGAC+AGG - chr3_3:17018896-17018915 Msa0444170:three_prime_UTR 25.0%
! TTGACAGGAGAAAATATATA+AGG - chr3_3:17018911-17018930 Msa0444170:three_prime_UTR 25.0%
! TGACAGGAGAAAATATATAA+GGG - chr3_3:17018912-17018931 Msa0444170:three_prime_UTR 25.0%
! GGAAATTAATCATAGTTGAT+AGG - chr3_3:17018945-17018964 Msa0444170:three_prime_UTR 25.0%
! TTCTATGAAAAGATTTACTC+AGG - chr3_3:17019007-17019026 Msa0444170:three_prime_UTR 25.0%
! TCTATGAAAAGATTTACTCA+GGG - chr3_3:17019008-17019027 Msa0444170:three_prime_UTR 25.0%
!!! TTTTTTATATGTATGGCTGT+TGG - chr3_3:17019064-17019083 Msa0444170:three_prime_UTR 25.0%
! GTGTATATTACAAACTCAAA+TGG + chr3_3:17019155-17019174 None:intergenic 25.0%
!! ATGTTGAAGGAAAATTTTAG+AGG - chr3_3:17019477-17019496 Msa0444170:intron 25.0%
!! TGTTGAAGGAAAATTTTAGA+GGG - chr3_3:17019478-17019497 Msa0444170:intron 25.0%
!!! GAAAAGTTGGTGTATTTATA+GGG - chr3_3:17019506-17019525 Msa0444170:intron 25.0%
! CCAAAGTACGAATAAAATAT+GGG + chr3_3:17019549-17019568 None:intergenic 25.0%
!! CCATATTTTATTCGTACTTT+GGG - chr3_3:17019547-17019566 Msa0444170:intron 25.0%
!! ATGTCTGTTACAAAGTATTA+TGG - chr3_3:17019782-17019801 Msa0444170:intron 25.0%
!! TGTCTGTTACAAAGTATTAT+GGG - chr3_3:17019783-17019802 Msa0444170:intron 25.0%
! TGTCAAACCTAGTAATAAAA+CGG - chr3_3:17019958-17019977 Msa0444170:intron 25.0%
!!! TCTATTTCCGTTTTATTACT+AGG + chr3_3:17019968-17019987 None:intergenic 25.0%
!!! TTCAGCTTGCTAATATAATA+TGG - chr3_3:17020127-17020146 Msa0444170:intron 25.0%
!!! TCAGCTTGCTAATATAATAT+GGG - chr3_3:17020128-17020147 Msa0444170:intron 25.0%
! GTGATAAAATTGCTAATTAC+TGG - chr3_3:17020472-17020491 Msa0444170:three_prime_UTR 25.0%
!! ATTTTTCATATTATGACGGT+GGG + chr3_3:17020586-17020605 None:intergenic 25.0%
!! TATTTTTCATATTATGACGG+TGG + chr3_3:17020587-17020606 None:intergenic 25.0%
!!! TGATTTTACTGATTATGACT+GGG - chr3_3:17020733-17020752 Msa0444170:intron 25.0%
! CATTATGATCATAAAAGTCT+TGG - chr3_3:17020858-17020877 Msa0444170:intron 25.0%
! AAATTTGAAGGAACTTAAGA+TGG + chr3_3:17020991-17021010 None:intergenic 25.0%
! TTTCACAGGAATAAATTTGA+AGG + chr3_3:17021003-17021022 None:intergenic 25.0%
! TTTCCTAGTTTAAGTAGTAA+AGG + chr3_3:17021117-17021136 None:intergenic 25.0%
! TTACTACTTAAACTAGGAAA+CGG - chr3_3:17021117-17021136 Msa0444170:intron 25.0%
!! AGAAATCTTTTCGTAGTTAA+GGG + chr3_3:17021558-17021577 None:intergenic 25.0%
! TAAACTAGATAGCATAAACT+AGG + chr3_3:17021859-17021878 None:intergenic 25.0%
!! AACCCAATAAGTTTATCTTT+TGG + chr3_3:17021907-17021926 None:intergenic 25.0%
!! TATTGGGTTATCTTAGATTT+TGG - chr3_3:17021918-17021937 Msa0444170:intron 25.0%
!! ATTGGGTTATCTTAGATTTT+GGG - chr3_3:17021919-17021938 Msa0444170:intron 25.0%
! TCTTATCTAGTTATCTTACA+AGG + chr3_3:17021968-17021987 None:intergenic 25.0%
!! ATACTTTATAAGCTCTTTTC+AGG - chr3_3:17021995-17022014 Msa0444170:intron 25.0%
!! TTTTCTCAATAGATTATGAG+TGG - chr3_3:17022237-17022256 Msa0444170:intron 25.0%
! TTGACACAATATTATGTCAA+GGG + chr3_3:17022436-17022455 None:intergenic 25.0%
! TAACAGAATAAATTCTTGGA+TGG + chr3_3:17022485-17022504 None:intergenic 25.0%
! AAAGTCAAAGATAAAACAAG+AGG - chr3_3:17022556-17022575 Msa0444170:intron 25.0%
! AAGTCAAAGATAAAACAAGA+GGG - chr3_3:17022557-17022576 Msa0444170:intron 25.0%
!! AAAGATTTGCAGGATTTTTA+TGG - chr3_3:17022581-17022600 Msa0444170:intron 25.0%
!!! AATTTTTCAATTTTCTCCTG+AGG + chr3_3:17022917-17022936 None:intergenic 25.0%
! AGGAGAAAATTGAAAAATTG+AGG - chr3_3:17022918-17022937 Msa0444170:intron 25.0%
! AGAAAATTGAAAAATTGAGG+CGG - chr3_3:17022921-17022940 Msa0444170:intron 25.0%
! TAGAATGACTTTGAATTTGT+GGG + chr3_3:17023045-17023064 None:intergenic 25.0%
!! GTACTAAGATCTTCAATTTT+AGG + chr3_3:17023082-17023101 None:intergenic 25.0%
! CAGTATGATTACTTTATCTA+TGG - chr3_3:17023563-17023582 Msa0444170:intron 25.0%
!!! TCTATGGTTGATAATTTCAA+AGG - chr3_3:17023579-17023598 Msa0444170:intron 25.0%
! GAAATATTATGAATCACTCT+TGG + chr3_3:17023633-17023652 None:intergenic 25.0%
!!! AACATATTGATTTTAGTACG+TGG - chr3_3:17023700-17023719 Msa0444170:intron 25.0%
! ACCAAAACAGTGTATATTAT+TGG - chr3_3:17023773-17023792 Msa0444170:intron 25.0%
!! TCCAATAATATACACTGTTT+TGG + chr3_3:17023777-17023796 None:intergenic 25.0%
! TTATTGGAATTAAACTGACT+AGG - chr3_3:17023789-17023808 Msa0444170:intron 25.0%
!!! TGAAAATGGGTTTTACTATA+GGG - chr3_3:17023830-17023849 Msa0444170:intron 25.0%
! ACTTACATTTACATCAGATT+CGG - chr3_3:17023954-17023973 Msa0444170:intron 25.0%
! TGTGATCATTTAAACAACAA+AGG + chr3_3:17024051-17024070 None:intergenic 25.0%
! GTTTATGACTTTATCTCTAA+TGG + chr3_3:17025063-17025082 None:intergenic 25.0%
! ATTGATATGAAGGCAAATAT+TGG + chr3_3:17025218-17025237 None:intergenic 25.0%
! TTTAGCCCTATTAATTTCAT+AGG + chr3_3:17025422-17025441 None:intergenic 25.0%
! CTTTAATCCATAAATAGTCT+AGG - chr3_3:17025451-17025470 Msa0444170:five_prime_UTR 25.0%
!!! ATTTTGATACCTAATGCAAA+GGG + chr3_3:17025668-17025687 None:intergenic 25.0%
!!! AATTTTGATACCTAATGCAA+AGG + chr3_3:17025669-17025688 None:intergenic 25.0%
! TTTGCATTAGGTATCAAAAT+TGG - chr3_3:17025668-17025687 Msa0444170:five_prime_UTR 25.0%
! AACATTTAGCCATTAAATCA+TGG - chr3_3:17025699-17025718 Msa0444170:five_prime_UTR 25.0%
AGAAAAAATGAAGGATCAAG+TGG + chr3_3:17016152-17016171 None:intergenic 30.0%
!! GGGGATTTTAGAAAAAATGA+AGG + chr3_3:17016161-17016180 None:intergenic 30.0%
CTTATGCTTATTTGCGAAAT+TGG + chr3_3:17016197-17016216 None:intergenic 30.0%
TGCAAAATCGACAAAGAAAA+CGG + chr3_3:17016354-17016373 None:intergenic 30.0%
!!! TGATTCTGGTTTTTTATCTG+TGG - chr3_3:17016583-17016602 Msa0444170:three_prime_UTR 30.0%
! GTAGCGTGTTTATATGTTTT+TGG - chr3_3:17016797-17016816 Msa0444170:intron 30.0%
!!! AGGGTTCTTAATTAGTTTTG+AGG - chr3_3:17017140-17017159 Msa0444170:intron 30.0%
TTCAAGCGATTATCAATCAT+TGG + chr3_3:17017206-17017225 None:intergenic 30.0%
TTGTTAGGATGAATAATACG+AGG - chr3_3:17017377-17017396 Msa0444170:three_prime_UTR 30.0%
CACTATAGCATAGTGAAATT+CGG + chr3_3:17017552-17017571 None:intergenic 30.0%
! AAAAAAAAAAGGCGGCTTTT+AGG + chr3_3:17017614-17017633 None:intergenic 30.0%
GAAGGTCTTGAATTTGAATT+TGG - chr3_3:17017712-17017731 Msa0444170:intron 30.0%
CAAATAATTTCCTAACTGAG+AGG + chr3_3:17017740-17017759 None:intergenic 30.0%
GTTTATATGGTGAAAAGAGA+CGG - chr3_3:17017864-17017883 Msa0444170:intron 30.0%
TTTATATGGTGAAAAGAGAC+GGG - chr3_3:17017865-17017884 Msa0444170:intron 30.0%
TTATCCAATAAGCAATATCG+TGG - chr3_3:17017907-17017926 Msa0444170:intron 30.0%
TATCCAATAAGCAATATCGT+GGG - chr3_3:17017908-17017927 Msa0444170:intron 30.0%
GGAGGTTATCATAATTGTTA+GGG - chr3_3:17018159-17018178 Msa0444170:intron 30.0%
!!! CATCTTTTTTTTTTTTGGGG+GGG - chr3_3:17018231-17018250 Msa0444170:intron 30.0%
!!! ATCTTTTTTTTTTTTGGGGG+GGG - chr3_3:17018232-17018251 Msa0444170:intron 30.0%
AAATCATGGAATCAGATGTA+AGG + chr3_3:17018450-17018469 None:intergenic 30.0%
!!! GTGCAGCTCTATTTTTTTTT+TGG - chr3_3:17018552-17018571 Msa0444170:three_prime_UTR 30.0%
!!! AGCTCTATTTTTTTTTTGGG+AGG - chr3_3:17018556-17018575 Msa0444170:three_prime_UTR 30.0%
!!! GCTCTATTTTTTTTTTGGGA+GGG - chr3_3:17018557-17018576 Msa0444170:three_prime_UTR 30.0%
! CTTTTTCCCATCTTTGTATT+TGG + chr3_3:17018665-17018684 None:intergenic 30.0%
TCACTACATATTCCTTCAAT+TGG + chr3_3:17018777-17018796 None:intergenic 30.0%
GACAGGAGAAAATATATAAG+GGG - chr3_3:17018913-17018932 Msa0444170:three_prime_UTR 30.0%
CAACTATGATTAATTTCCTG+AGG + chr3_3:17018943-17018962 None:intergenic 30.0%
AGAACCCACAAACAATATAT+TGG + chr3_3:17019115-17019134 None:intergenic 30.0%
TTATAGGGACTAAATGTTGA+AGG - chr3_3:17019464-17019483 Msa0444170:intron 30.0%
!! CGAAAAGTTGGTGTATTTAT+AGG - chr3_3:17019505-17019524 Msa0444170:intron 30.0%
! CCCATATTTTATTCGTACTT+TGG - chr3_3:17019546-17019565 Msa0444170:intron 30.0%
CCCAAAGTACGAATAAAATA+TGG + chr3_3:17019550-17019569 None:intergenic 30.0%
!! ATGAAGACTCATTTTTGTGA+TGG - chr3_3:17019653-17019672 Msa0444170:intron 30.0%
TAGTAGAAAATCCTACTTCA+TGG + chr3_3:17019719-17019738 None:intergenic 30.0%
TCTCTAAACAAACATAGACA+AGG + chr3_3:17019823-17019842 None:intergenic 30.0%
CTATGTTTGTTTAGAGAGTT+TGG - chr3_3:17019826-17019845 Msa0444170:intron 30.0%
TGAGAAGGAAAAGACATTAT+GGG + chr3_3:17019933-17019952 None:intergenic 30.0%
TGCTAATATAATATGGGATG+AGG - chr3_3:17020134-17020153 Msa0444170:intron 30.0%
GCTAATATAATATGGGATGA+GGG - chr3_3:17020135-17020154 Msa0444170:intron 30.0%
AAACAAGAAAGAAGTGAATC+AGG - chr3_3:17020212-17020231 Msa0444170:intron 30.0%
AGTTCGAACCTTAACAATAA+TGG - chr3_3:17020309-17020328 Msa0444170:three_prime_UTR 30.0%
ACTGAACTTTCTAAATATCG+AGG - chr3_3:17020420-17020439 Msa0444170:three_prime_UTR 30.0%
! TTTTATCAAAATGCCGATGA+AGG - chr3_3:17020698-17020717 Msa0444170:intron 30.0%
!! GTGATTTTACTGATTATGAC+TGG - chr3_3:17020732-17020751 Msa0444170:intron 30.0%
TGAATTTCCGAAGTCTAAAA+TGG - chr3_3:17020904-17020923 Msa0444170:intron 30.0%
AAGTGATGAATACAACAGTT+AGG + chr3_3:17020945-17020964 None:intergenic 30.0%
AGACCTTTACTACTTAAACT+AGG - chr3_3:17021111-17021130 Msa0444170:intron 30.0%
TACTACTTAAACTAGGAAAC+GGG - chr3_3:17021118-17021137 Msa0444170:intron 30.0%
!! TAAAAGTTGATGATTGTCAG+TGG - chr3_3:17021160-17021179 Msa0444170:three_prime_UTR 30.0%
!! AAAAGTTGATGATTGTCAGT+GGG - chr3_3:17021161-17021180 Msa0444170:three_prime_UTR 30.0%
CACATATAATGAAAGTCAAG+GGG + chr3_3:17021198-17021217 None:intergenic 30.0%
GCACATATAATGAAAGTCAA+GGG + chr3_3:17021199-17021218 None:intergenic 30.0%
CAATTGTTTACTCTTTACTC+CGG + chr3_3:17021260-17021279 None:intergenic 30.0%
! TTAGTCTTTGTCTCTTACAA+CGG - chr3_3:17021302-17021321 Msa0444170:three_prime_UTR 30.0%
!! ATGCTTTAAGGAATAGATCA+GGG - chr3_3:17021483-17021502 Msa0444170:CDS 30.0%
! TGTTCTTCTTTGATTTCCAA+AGG + chr3_3:17021509-17021528 None:intergenic 30.0%
! CAGAAATCTTTTCGTAGTTA+AGG + chr3_3:17021559-17021578 None:intergenic 30.0%
CTTAACTACGAAAAGATTTC+TGG - chr3_3:17021557-17021576 Msa0444170:CDS 30.0%
TAGAGAACTGAATAATAGAC+AGG + chr3_3:17021700-17021719 None:intergenic 30.0%
TCAGTTCTCTATTTGTATAG+TGG - chr3_3:17021709-17021728 Msa0444170:CDS 30.0%
ATCTGAATCATACAGTCTAA+AGG + chr3_3:17021759-17021778 None:intergenic 30.0%
CTGTATGATTCAGATATGTT+AGG - chr3_3:17021764-17021783 Msa0444170:CDS 30.0%
TTGTATGATCCAGATATGTT+AGG - chr3_3:17021790-17021809 Msa0444170:CDS 30.0%
AACTAGGAAGCAATTATAGA+AGG + chr3_3:17021843-17021862 None:intergenic 30.0%
TATCTAGTTATCTTACAAGG+CGG + chr3_3:17021965-17021984 None:intergenic 30.0%
! TCACACATTGACTATAAAGA+AGG + chr3_3:17022208-17022227 None:intergenic 30.0%
AATTGCATTTCAGCATCTTA+TGG - chr3_3:17022327-17022346 Msa0444170:intron 30.0%
CTTGACACAATATTATGTCA+AGG + chr3_3:17022437-17022456 None:intergenic 30.0%
CTTGACATAATATTGTGTCA+AGG - chr3_3:17022435-17022454 Msa0444170:intron 30.0%
!! AAAAGTACCAGTTGAAAACA+CGG - chr3_3:17022531-17022550 Msa0444170:intron 30.0%
AGTCAAAGATAAAACAAGAG+GGG - chr3_3:17022558-17022577 Msa0444170:intron 30.0%
! TGCAGGATTTTTATGGTAAT+TGG - chr3_3:17022588-17022607 Msa0444170:intron 30.0%
ATGATGTTCTGATATGTTTC+AGG + chr3_3:17022719-17022738 None:intergenic 30.0%
GAACATCATAAATCCATATG+TGG - chr3_3:17022730-17022749 Msa0444170:intron 30.0%
! TAACTTTTCAAAGGACTCAA+CGG + chr3_3:17022863-17022882 None:intergenic 30.0%
CTAGAATGACTTTGAATTTG+TGG + chr3_3:17023046-17023065 None:intergenic 30.0%
ATTCAAAGTCATTCTAGTGA+TGG - chr3_3:17023049-17023068 Msa0444170:intron 30.0%
TTCAAAGTCATTCTAGTGAT+GGG - chr3_3:17023050-17023069 Msa0444170:intron 30.0%
GAATCATCTTGTTCAATTAG+AGG + chr3_3:17023109-17023128 None:intergenic 30.0%
TGTTTCCTTGCATACTAATT+TGG - chr3_3:17023253-17023272 Msa0444170:intron 30.0%
GTTTCCTTGCATACTAATTT+GGG - chr3_3:17023254-17023273 Msa0444170:intron 30.0%
ACTGTAAAAAAAGTTTGCCT+CGG + chr3_3:17023293-17023312 None:intergenic 30.0%
! AGTAGGTAGTATTTTACTGT+AGG + chr3_3:17023482-17023501 None:intergenic 30.0%
AATATGTTCCATGTATTACC+AGG + chr3_3:17023688-17023707 None:intergenic 30.0%
!! TGATTTTAGTACGTGGAATA+AGG - chr3_3:17023707-17023726 Msa0444170:intron 30.0%
! TAAACTGACTAGGTTTTCAT+AGG - chr3_3:17023799-17023818 Msa0444170:intron 30.0%
! AAACTGACTAGGTTTTCATA+GGG - chr3_3:17023800-17023819 Msa0444170:intron 30.0%
ATAGGGACTAAACTGAAAAT+GGG - chr3_3:17023817-17023836 Msa0444170:intron 30.0%
!! CTGAAAATGGGTTTTACTAT+AGG - chr3_3:17023829-17023848 Msa0444170:intron 30.0%
!! GAAAATGGGTTTTACTATAG+GGG - chr3_3:17023831-17023850 Msa0444170:intron 30.0%
GAATCTGATGTAAATGTAAG+TGG + chr3_3:17023955-17023974 None:intergenic 30.0%
! TCACATTTTGTGACTAAAGT+AGG - chr3_3:17024066-17024085 Msa0444170:intron 30.0%
! TCCTAGTTATCTTATTTGAG+AGG - chr3_3:17024098-17024117 Msa0444170:intron 30.0%
TCCTCTCAAATAAGATAACT+AGG + chr3_3:17024102-17024121 None:intergenic 30.0%
! AACACACTTAACAGTTTTAC+TGG + chr3_3:17024136-17024155 None:intergenic 30.0%
AGGAAATTATTCTGACAAAC+TGG - chr3_3:17024351-17024370 Msa0444170:intron 30.0%
AATCAACAACTTTCTCACAT+TGG - chr3_3:17024469-17024488 Msa0444170:intron 30.0%
ATCAACAACTTTCTCACATT+GGG - chr3_3:17024470-17024489 Msa0444170:intron 30.0%
!! TTATTTTATTGTCAGCCTTC+TGG - chr3_3:17024721-17024740 Msa0444170:intron 30.0%
! TGCTTAATTTGACATATGAG+TGG + chr3_3:17024935-17024954 None:intergenic 30.0%
!! ATGACACAAACTTTAAAGCA+TGG + chr3_3:17024980-17024999 None:intergenic 30.0%
GTCATGTGACTTTCTTTAAA+TGG + chr3_3:17025182-17025201 None:intergenic 30.0%
AATGCAATCAATGTGAAATG+AGG + chr3_3:17025298-17025317 None:intergenic 30.0%
! TTGCATTTCAAGTCAATACT+TGG - chr3_3:17025311-17025330 Msa0444170:exon 30.0%
CTATTAATTTCATAGGCTGT+GGG + chr3_3:17025415-17025434 None:intergenic 30.0%
CACAGCCTATGAAATTAATA+GGG - chr3_3:17025414-17025433 Msa0444170:five_prime_UTR 30.0%
CCATAATCCTAGACTATTTA+TGG + chr3_3:17025461-17025480 None:intergenic 30.0%
! CCATAAATAGTCTAGGATTA+TGG - chr3_3:17025458-17025477 Msa0444170:five_prime_UTR 30.0%
ATGTAAGTAAACTGTGAACA+TGG - chr3_3:17025607-17025626 Msa0444170:five_prime_UTR 30.0%
GAAGGATAACCATGATTTAA+TGG + chr3_3:17025711-17025730 None:intergenic 30.0%
TGAATGTAACCATTGAATCT+TGG - chr3_3:17025782-17025801 Msa0444170:five_prime_UTR 30.0%
AACATGATACCAAGATTCAA+TGG + chr3_3:17025794-17025813 None:intergenic 30.0%
TGCTTATTTGCGAAATTGGA+GGG + chr3_3:17016193-17016212 None:intergenic 35.0%
ATGCTTATTTGCGAAATTGG+AGG + chr3_3:17016194-17016213 None:intergenic 35.0%
ATCGACAAAGAAAACGGTAA+CGG + chr3_3:17016348-17016367 None:intergenic 35.0%
!! TTGAAGTGTTGTTGTGTAGT+TGG - chr3_3:17016841-17016860 Msa0444170:intron 35.0%
GACAAGATAAGTATCTGACA+CGG - chr3_3:17017024-17017043 Msa0444170:intron 35.0%
ACAAGATAAGTATCTGACAC+GGG - chr3_3:17017025-17017044 Msa0444170:intron 35.0%
TATACAGCTCAGATACTCTT+CGG + chr3_3:17017063-17017082 None:intergenic 35.0%
GTATCTGAGCTGTATAGTTA+AGG - chr3_3:17017067-17017086 Msa0444170:intron 35.0%
GATTATCAATCATTGGTCCA+CGG + chr3_3:17017199-17017218 None:intergenic 35.0%
ATCGCTTGAAACTTTGATGT+CGG - chr3_3:17017216-17017235 Msa0444170:intron 35.0%
ATCATCACTTCTGTACATAG+TGG - chr3_3:17017244-17017263 Msa0444170:intron 35.0%
ATCCTAACAACCAAATGAGA+CGG + chr3_3:17017367-17017386 None:intergenic 35.0%
CTTTCGAATGTTGTCAATCA+CGG - chr3_3:17017419-17017438 Msa0444170:three_prime_UTR 35.0%
TGATAAAATCTGCGACACAA+TGG - chr3_3:17017461-17017480 Msa0444170:three_prime_UTR 35.0%
!! ATGGTGCTATAGCAACTATT+TGG - chr3_3:17017480-17017499 Msa0444170:three_prime_UTR 35.0%
CGAATTTCACTATGCTATAG+TGG - chr3_3:17017550-17017569 Msa0444170:three_prime_UTR 35.0%
ACGAAGTACAGAAAGTCAAA+GGG - chr3_3:17017678-17017697 Msa0444170:intron 35.0%
CAAAGGGGAAATAATTGAGA+AGG - chr3_3:17017694-17017713 Msa0444170:intron 35.0%
CTGAACTATCACAAACAGAA+TGG + chr3_3:17017813-17017832 None:intergenic 35.0%
TTATATGGTGAAAAGAGACG+GGG - chr3_3:17017866-17017885 Msa0444170:intron 35.0%
TTTGTAGTCATGGAGTGTAA+TGG - chr3_3:17018131-17018150 Msa0444170:intron 35.0%
CGGAGGTTATCATAATTGTT+AGG - chr3_3:17018158-17018177 Msa0444170:intron 35.0%
!!! TCTTTTTTTTTTTTGGGGGG+GGG - chr3_3:17018233-17018252 Msa0444170:intron 35.0%
TTCAACTGACAAGAAAATGC+TGG + chr3_3:17018525-17018544 None:intergenic 35.0%
AAGTAGAGGATTACTGGATT+AGG - chr3_3:17018730-17018749 Msa0444170:intron 35.0%
GGAATATGTAGTGAGTAAAC+AGG - chr3_3:17018783-17018802 Msa0444170:three_prime_UTR 35.0%
!!! GGTCCTTATTTTTTCTCTAC+TGG + chr3_3:17018868-17018887 None:intergenic 35.0%
ACAATTCATTATCTGTGGGA+TGG + chr3_3:17018889-17018908 None:intergenic 35.0%
GCATATAAGGTAATATGAGC+TGG + chr3_3:17019039-17019058 None:intergenic 35.0%
CGCGATGATATGTACATAAA+AGG + chr3_3:17019292-17019311 None:intergenic 35.0%
!! CTTTGGGATTATCACTTCAT+AGG - chr3_3:17019563-17019582 Msa0444170:intron 35.0%
GGATTATCACTTCATAGGAT+TGG - chr3_3:17019568-17019587 Msa0444170:intron 35.0%
!!! CTCATTTTTGTGATGGACTT+TGG - chr3_3:17019660-17019679 Msa0444170:intron 35.0%
! TAGAGAGTTTGGACTTTTGA+AGG - chr3_3:17019837-17019856 Msa0444170:intron 35.0%
!! AGTTTGGACTTTTGAAGGAA+AGG - chr3_3:17019842-17019861 Msa0444170:intron 35.0%
TACACCTAACATGACAGTAA+GGG + chr3_3:17019871-17019890 None:intergenic 35.0%
ATACACCTAACATGACAGTA+AGG + chr3_3:17019872-17019891 None:intergenic 35.0%
CTGAGAAGGAAAAGACATTA+TGG + chr3_3:17019934-17019953 None:intergenic 35.0%
AGGTTTGACATATACTGAGA+AGG + chr3_3:17019948-17019967 None:intergenic 35.0%
AGGGAAATACATGAAGAATG+AGG + chr3_3:17020008-17020027 None:intergenic 35.0%
CTGATAGTAGCAACATAAGT+AGG + chr3_3:17020042-17020061 None:intergenic 35.0%
AATATAATATGGGATGAGGG+AGG - chr3_3:17020138-17020157 Msa0444170:intron 35.0%
TTATTAAGCTTACACACAGC+TGG + chr3_3:17020240-17020259 None:intergenic 35.0%
CTGTGTGTAAGCTTAATAAG+CGG - chr3_3:17020241-17020260 Msa0444170:intron 35.0%
ATCAAAATCAGCTTTCGTCT+CGG + chr3_3:17020274-17020293 None:intergenic 35.0%
!! GCTGATTTTGATGGAAAACT+AGG - chr3_3:17020282-17020301 Msa0444170:three_prime_UTR 35.0%
TCGAACCTTAACAATAATGG+AGG - chr3_3:17020312-17020331 Msa0444170:three_prime_UTR 35.0%
GTTGTCCTCCATTATTGTTA+AGG + chr3_3:17020320-17020339 None:intergenic 35.0%
!! GAAGTTTTGATGACCTTGAT+CGG - chr3_3:17020765-17020784 Msa0444170:intron 35.0%
TTTACCTGAAAATCCGATCA+AGG + chr3_3:17020781-17020800 None:intergenic 35.0%
TAAGCATATGTCTGATAGCA+TGG - chr3_3:17020832-17020851 Msa0444170:intron 35.0%
! GTTTGGTCCATTTTAGACTT+CGG + chr3_3:17020914-17020933 None:intergenic 35.0%
GATGAATACAACAGTTAGGA+CGG + chr3_3:17020941-17020960 None:intergenic 35.0%
CTTTATTGTTGCAGCTACAA+CGG + chr3_3:17021042-17021061 None:intergenic 35.0%
ACTACTTAAACTAGGAAACG+GGG - chr3_3:17021119-17021138 Msa0444170:intron 35.0%
TATAATGAAAGTCAAGGGGA+AGG + chr3_3:17021194-17021213 None:intergenic 35.0%
GGCACATATAATGAAAGTCA+AGG + chr3_3:17021200-17021219 None:intergenic 35.0%
TTCATTATATGTGCCCATGA+TGG - chr3_3:17021205-17021224 Msa0444170:three_prime_UTR 35.0%
TCATTATATGTGCCCATGAT+GGG - chr3_3:17021206-17021225 Msa0444170:three_prime_UTR 35.0%
TTTCCAATGTTACCCATCAT+GGG + chr3_3:17021221-17021240 None:intergenic 35.0%
! TTTTCCAATGTTACCCATCA+TGG + chr3_3:17021222-17021241 None:intergenic 35.0%
AGCAATGATGACCCTATATT+TGG - chr3_3:17021365-17021384 Msa0444170:three_prime_UTR 35.0%
CAGAATTATCAAGACTTGCA+TGG + chr3_3:17021391-17021410 None:intergenic 35.0%
! TTGATAATTCTGATGACCTC+TGG - chr3_3:17021399-17021418 Msa0444170:three_prime_UTR 35.0%
! CTATTCCTTAAAGCATCAGT+GGG + chr3_3:17021479-17021498 None:intergenic 35.0%
! TCTATTCCTTAAAGCATCAG+TGG + chr3_3:17021480-17021499 None:intergenic 35.0%
!! GATGCTTTAAGGAATAGATC+AGG - chr3_3:17021482-17021501 Msa0444170:CDS 35.0%
! TTTTCTATACTCTGACAAGC+AGG + chr3_3:17021584-17021603 None:intergenic 35.0%
AGAACTGAATAATAGACAGG+TGG + chr3_3:17021697-17021716 None:intergenic 35.0%
! CATTGACTATAAAGAAGGCT+TGG + chr3_3:17022203-17022222 None:intergenic 35.0%
ATTCTTACTCTTGCATGAGA+GGG + chr3_3:17022279-17022298 None:intergenic 35.0%
AATTCTTACTCTTGCATGAG+AGG + chr3_3:17022280-17022299 None:intergenic 35.0%
GATGCTGAAATGCAATTAGA+AGG + chr3_3:17022324-17022343 None:intergenic 35.0%
! GTGTTTTCAACTGGTACTTT+TGG + chr3_3:17022532-17022551 None:intergenic 35.0%
!! ACTTTTTCCGTGTTTTCAAC+TGG + chr3_3:17022541-17022560 None:intergenic 35.0%
AGTTTCAGTCAGGAAATCTT+AGG - chr3_3:17022798-17022817 Msa0444170:intron 35.0%
! GAGTCCTTTGAAAAGTTATG+CGG - chr3_3:17022865-17022884 Msa0444170:intron 35.0%
! AGTCCTTTGAAAAGTTATGC+GGG - chr3_3:17022866-17022885 Msa0444170:intron 35.0%
AAATTGAAAAATTGAGGCGG+CGG - chr3_3:17022924-17022943 Msa0444170:intron 35.0%
AATGACTTTGAATTTGTGGG+TGG + chr3_3:17023042-17023061 None:intergenic 35.0%
TTGAAGAAACCATATTGTGC+AGG - chr3_3:17023164-17023183 Msa0444170:intron 35.0%
GCTTCAGGATGTTATATCAA+AGG - chr3_3:17023186-17023205 Msa0444170:intron 35.0%
CTGTAAAAAAAGTTTGCCTC+GGG + chr3_3:17023292-17023311 None:intergenic 35.0%
GCTTTCTTCTCTTGCAAAAA+CGG + chr3_3:17023436-17023455 None:intergenic 35.0%
! GTAGGTTTTCTAACCTGTTT+TGG + chr3_3:17023464-17023483 None:intergenic 35.0%
GTCACAGTAATTGAAGTAGT+AGG + chr3_3:17023499-17023518 None:intergenic 35.0%
TGCTCATATTGAATCAATCC+TGG - chr3_3:17023667-17023686 Msa0444170:intron 35.0%
GAATCAATCCTGGTAATACA+TGG - chr3_3:17023677-17023696 Msa0444170:intron 35.0%
GGACTAAAGTCAAAACAACA+AGG - chr3_3:17023728-17023747 Msa0444170:intron 35.0%
AACAAGGATCAAAGTACGTT+TGG - chr3_3:17023744-17023763 Msa0444170:intron 35.0%
ACAAGGATCAAAGTACGTTT+GGG - chr3_3:17023745-17023764 Msa0444170:intron 35.0%
CATAGGGACTAAACTGAAAA+TGG - chr3_3:17023816-17023835 Msa0444170:intron 35.0%
TAGATGATTTACCGTTAGCT+AGG - chr3_3:17023984-17024003 Msa0444170:intron 35.0%
AGTTTACTTAGCCTAGCTAA+CGG + chr3_3:17023998-17024017 None:intergenic 35.0%
TTGTGACTAAAGTAGGACTT+CGG - chr3_3:17024073-17024092 Msa0444170:intron 35.0%
GTACGGGAAAACTAGTTATT+AGG + chr3_3:17024219-17024238 None:intergenic 35.0%
AGGTCTATGAAAGAGTAAAC+GGG + chr3_3:17024320-17024339 None:intergenic 35.0%
CAGGTCTATGAAAGAGTAAA+CGG + chr3_3:17024321-17024340 None:intergenic 35.0%
TTTACTCTTTCATAGACCTG+TGG - chr3_3:17024321-17024340 Msa0444170:intron 35.0%
TAATTTCCTGTTAACTCCAC+AGG + chr3_3:17024340-17024359 None:intergenic 35.0%
GAACATCTTTCTTCATTGAG+AGG + chr3_3:17024602-17024621 None:intergenic 35.0%
ATAACATGCAAGCATGAAAC+TGG + chr3_3:17024787-17024806 None:intergenic 35.0%
TGTCTATCTGACCATACTTA+AGG - chr3_3:17024856-17024875 Msa0444170:intron 35.0%
! TTTAAAGCATGGTCTAAGTC+AGG + chr3_3:17024969-17024988 None:intergenic 35.0%
AAGAAAGTCACATGACTCTT+TGG - chr3_3:17025186-17025205 Msa0444170:intron 35.0%
! GTCAATACTTGGCATGATTT+TGG - chr3_3:17025322-17025341 Msa0444170:exon 35.0%
! AATACTTGGCATGATTTTGG+AGG - chr3_3:17025325-17025344 Msa0444170:five_prime_UTR 35.0%
!! ATGATTTTGGAGGTACATTG+AGG - chr3_3:17025335-17025354 Msa0444170:five_prime_UTR 35.0%
!! TGATTTTGGAGGTACATTGA+GGG - chr3_3:17025336-17025355 Msa0444170:five_prime_UTR 35.0%
CCTATTAATTTCATAGGCTG+TGG + chr3_3:17025416-17025435 None:intergenic 35.0%
CCACAGCCTATGAAATTAAT+AGG - chr3_3:17025413-17025432 Msa0444170:five_prime_UTR 35.0%
TCAACTATTGACAGTCTTCA+AGG + chr3_3:17025513-17025532 None:intergenic 35.0%
TGAAGACTGTCAATAGTTGA+TGG - chr3_3:17025513-17025532 Msa0444170:five_prime_UTR 35.0%
TAAACTGTGAACATGGATGA+CGG - chr3_3:17025614-17025633 Msa0444170:five_prime_UTR 35.0%
ACATTGGGATATGAGGGTTT+GGG + chr3_3:17016117-17016136 None:intergenic 40.0%
TACATTGGGATATGAGGGTT+TGG + chr3_3:17016118-17016137 None:intergenic 40.0%
GCTTATTTGCGAAATTGGAG+GGG + chr3_3:17016192-17016211 None:intergenic 40.0%
!!! AACGACGCTGTTTTGTTTCA+TGG - chr3_3:17016495-17016514 Msa0444170:three_prime_UTR 40.0%
AGAATTAGCTCAATCATCGC+CGG + chr3_3:17016551-17016570 None:intergenic 40.0%
CTACGTCTACAGTTTGATTC+TGG - chr3_3:17016569-17016588 Msa0444170:three_prime_UTR 40.0%
CAAGATAAGTATCTGACACG+GGG - chr3_3:17017026-17017045 Msa0444170:intron 40.0%
!! GTTAAGGAGCAATTTTTGGG+AGG - chr3_3:17017083-17017102 Msa0444170:intron 40.0%
!!! AGTTTTGAGGTGATTGCTAG+TGG - chr3_3:17017153-17017172 Msa0444170:intron 40.0%
!!! GTTTTGAGGTGATTGCTAGT+GGG - chr3_3:17017154-17017173 Msa0444170:intron 40.0%
TGAATCGACACTAATCACTC+AGG + chr3_3:17017270-17017289 None:intergenic 40.0%
AAATGAGACGGTAACCTAGT+CGG + chr3_3:17017355-17017374 None:intergenic 40.0%
TACCGTCTCATTTGGTTGTT+AGG - chr3_3:17017362-17017381 Msa0444170:three_prime_UTR 40.0%
ATGTTGTCAATCACGGATAG+CGG - chr3_3:17017426-17017445 Msa0444170:three_prime_UTR 40.0%
!! TCACGGATAGCGGAAAATAT+AGG - chr3_3:17017436-17017455 Msa0444170:three_prime_UTR 40.0%
AGCATATCGTGGATCTATAG+CGG - chr3_3:17017521-17017540 Msa0444170:three_prime_UTR 40.0%
GACGAAGTACAGAAAGTCAA+AGG - chr3_3:17017677-17017696 Msa0444170:intron 40.0%
CGAAGTACAGAAAGTCAAAG+GGG - chr3_3:17017679-17017698 Msa0444170:intron 40.0%
! GAATTTGGTTCCTCTCAGTT+AGG - chr3_3:17017727-17017746 Msa0444170:intron 40.0%
GTTCCCACGATATTGCTTAT+TGG + chr3_3:17017914-17017933 None:intergenic 40.0%
CTGGCGCAATAGTAAGATAT+AGG + chr3_3:17017944-17017963 None:intergenic 40.0%
CCAGACAGTAGGTTAAGAAT+GGG - chr3_3:17017960-17017979 Msa0444170:intron 40.0%
CAGACAGTAGGTTAAGAATG+GGG - chr3_3:17017961-17017980 Msa0444170:intron 40.0%
!! TGTGAGCTTTGTTTCTGATG+TGG - chr3_3:17018033-17018052 Msa0444170:intron 40.0%
!! GTGAGCTTTGTTTCTGATGT+GGG - chr3_3:17018034-17018053 Msa0444170:intron 40.0%
!! CTTTGTTTCTGATGTGGGAA+TGG - chr3_3:17018039-17018058 Msa0444170:intron 40.0%
! TCATGGAGTGTAATGGAGAT+CGG - chr3_3:17018138-17018157 Msa0444170:intron 40.0%
!!! CTTTTTTTTTTTTGGGGGGG+GGG - chr3_3:17018234-17018253 Msa0444170:intron 40.0%
!!! TTTTTTTTTTTTGGGGGGGG+GGG - chr3_3:17018235-17018254 Msa0444170:intron 40.0%
CCTACTTTCTCACTTCTGAT+AGG + chr3_3:17018639-17018658 None:intergenic 40.0%
CCTATCAGAAGTGAGAAAGT+AGG - chr3_3:17018636-17018655 Msa0444170:intron 40.0%
ATCAGAAGTGAGAAAGTAGG+AGG - chr3_3:17018639-17018658 Msa0444170:intron 40.0%
TAGGAGGCCAAATACAAAGA+TGG - chr3_3:17018655-17018674 Msa0444170:intron 40.0%
AGGAGGCCAAATACAAAGAT+GGG - chr3_3:17018656-17018675 Msa0444170:intron 40.0%
GGATTGAAGTAGAGGATTAC+TGG - chr3_3:17018724-17018743 Msa0444170:intron 40.0%
TGTTACTAGCAGCCAATTGA+AGG - chr3_3:17018762-17018781 Msa0444170:three_prime_UTR 40.0%
ATATATAAGGGGTCATCCTC+AGG - chr3_3:17018924-17018943 Msa0444170:three_prime_UTR 40.0%
! TCGCGTTAGCCTGTAATTAT+TGG - chr3_3:17019307-17019326 Msa0444170:three_prime_UTR 40.0%
TTAGAGGGACTACGAAAAGT+TGG - chr3_3:17019493-17019512 Msa0444170:intron 40.0%
GATTCTGGGTTCTTCTTCTT+TGG + chr3_3:17019619-17019638 None:intergenic 40.0%
GCAATCTTTCTCCATGAAGT+AGG - chr3_3:17019705-17019724 Msa0444170:intron 40.0%
TAAGTAGGCACAAGGAAGAA+GGG + chr3_3:17020027-17020046 None:intergenic 40.0%
ATAAGTAGGCACAAGGAAGA+AGG + chr3_3:17020028-17020047 None:intergenic 40.0%
TAGCAACATAAGTAGGCACA+AGG + chr3_3:17020035-17020054 None:intergenic 40.0%
TTAAGATCTTCACTTGCCTC+TGG + chr3_3:17020192-17020211 None:intergenic 40.0%
TCAAAATCAGCTTTCGTCTC+GGG + chr3_3:17020273-17020292 None:intergenic 40.0%
!! GAGACGAAAGCTGATTTTGA+TGG - chr3_3:17020273-17020292 Msa0444170:intron 40.0%
!!! CTGATCAATTTTAGCTGCAC+TGG + chr3_3:17020388-17020407 None:intergenic 40.0%
CAGTGCAGCTAAAATTGATC+AGG - chr3_3:17020386-17020405 Msa0444170:three_prime_UTR 40.0%
CTGCACAAACAAAAACGCAT+AGG + chr3_3:17020529-17020548 None:intergenic 40.0%
!! CTATGCGTTTTTGTTTGTGC+AGG - chr3_3:17020527-17020546 Msa0444170:three_prime_UTR 40.0%
ACCCTGTTCTTTACCTTCAT+CGG + chr3_3:17020714-17020733 None:intergenic 40.0%
GATTATGACTGGGCTAACAT+AGG - chr3_3:17020743-17020762 Msa0444170:intron 40.0%
! ATGACCTTGATCGGATTTTC+AGG - chr3_3:17020774-17020793 Msa0444170:intron 40.0%
GACTTGCATGGCCAAATATA+GGG + chr3_3:17021379-17021398 None:intergenic 40.0%
AGACTTGCATGGCCAAATAT+AGG + chr3_3:17021380-17021399 None:intergenic 40.0%
AGCACATTCCACATTATCAG+CGG + chr3_3:17021618-17021637 None:intergenic 40.0%
GGAGATAGAAGTAAGCCTAT+TGG - chr3_3:17021638-17021657 Msa0444170:CDS 40.0%
AGACAGGTTCCTAACATATC+TGG + chr3_3:17021802-17021821 None:intergenic 40.0%
GCAAAGTGAGCAAAATAGAC+AGG + chr3_3:17021818-17021837 None:intergenic 40.0%
!! ATCTTACAAGGCGGTTTTGT+GGG + chr3_3:17021956-17021975 None:intergenic 40.0%
! TATCTTACAAGGCGGTTTTG+TGG + chr3_3:17021957-17021976 None:intergenic 40.0%
! CAATAGTGTTGGACATGAAC+GGG + chr3_3:17022066-17022085 None:intergenic 40.0%
! CCAATAGTGTTGGACATGAA+CGG + chr3_3:17022067-17022086 None:intergenic 40.0%
ATGTCCAACACTATTGGTGA+GGG - chr3_3:17022070-17022089 Msa0444170:intron 40.0%
TCAAACAGATTGCACACAGA+AGG + chr3_3:17022378-17022397 None:intergenic 40.0%
!! ATTCTTGGATGGCTTTGAGA+AGG + chr3_3:17022474-17022493 None:intergenic 40.0%
! TTGGTCTTCTTCAGCAACAT+CGG - chr3_3:17022607-17022626 Msa0444170:intron 40.0%
GGAGATGATTGTAACACAGA+AGG + chr3_3:17022659-17022678 None:intergenic 40.0%
TCATCTCCCTCTTCAATTCT+TGG - chr3_3:17022671-17022690 Msa0444170:intron 40.0%
CATCTCCCTCTTCAATTCTT+GGG - chr3_3:17022672-17022691 Msa0444170:intron 40.0%
! TCTGATATGTTTCAGGTCCT+AGG + chr3_3:17022712-17022731 None:intergenic 40.0%
!! TAAAACGAAGGTGCCACATA+TGG + chr3_3:17022746-17022765 None:intergenic 40.0%
! TATGTGGCACCTTCGTTTTA+TGG - chr3_3:17022746-17022765 Msa0444170:intron 40.0%
GACTGAAACTGTGTTAGCAT+TGG + chr3_3:17022788-17022807 None:intergenic 40.0%
ATGCTAACACAGTTTCAGTC+AGG - chr3_3:17022788-17022807 Msa0444170:intron 40.0%
TCAGAAACAACAGCAAGTAC+TGG - chr3_3:17022973-17022992 Msa0444170:intron 40.0%
CAGAAACAACAGCAAGTACT+GGG - chr3_3:17022974-17022993 Msa0444170:intron 40.0%
GTTTACTAGTGCAAGGAACT+TGG + chr3_3:17023003-17023022 None:intergenic 40.0%
CTTGCATACTAATTTGGGCA+CGG - chr3_3:17023259-17023278 Msa0444170:intron 40.0%
AAGAAAGCAGTAGCCAAAAC+AGG - chr3_3:17023448-17023467 Msa0444170:intron 40.0%
AGCTAGGCTAAGTAAACTGT+TGG - chr3_3:17024000-17024019 Msa0444170:intron 40.0%
! GGCTAAGTAAACTGTTGGTT+CGG - chr3_3:17024005-17024024 Msa0444170:intron 40.0%
!! GCTAAGTAAACTGTTGGTTC+GGG - chr3_3:17024006-17024025 Msa0444170:intron 40.0%
ATATCTGTGTGATACCAGCA+TGG + chr3_3:17024245-17024264 None:intergenic 40.0%
TTCGTCTCTGTTTCAACATC+AGG + chr3_3:17024277-17024296 None:intergenic 40.0%
! GAATCCTTGTCCATCTTTTG+AGG - chr3_3:17024498-17024517 Msa0444170:intron 40.0%
! ATAGGTTGGACCTCAAAAGA+TGG + chr3_3:17024511-17024530 None:intergenic 40.0%
!!! ATCTTTTGAGGTCCAACCTA+TGG - chr3_3:17024510-17024529 Msa0444170:intron 40.0%
TCTTAGTCTGATCCATAGGT+TGG + chr3_3:17024525-17024544 None:intergenic 40.0%
CTGTTCTTAGTCTGATCCAT+AGG + chr3_3:17024529-17024548 None:intergenic 40.0%
ACTAAGAACAGTCTCAGCAT+AGG - chr3_3:17024538-17024557 Msa0444170:intron 40.0%
AGAAAATGCATCTAACCCAC+CGG - chr3_3:17024567-17024586 Msa0444170:intron 40.0%
CAATGAGCATGGAAGGAATA+AGG + chr3_3:17024649-17024668 None:intergenic 40.0%
TCTACATGGATACTTGAGCT+TGG + chr3_3:17024754-17024773 None:intergenic 40.0%
AGGGTGACTGTCATTCTTAT+AGG - chr3_3:17025251-17025270 Msa0444170:intron 40.0%
GGGTGACTGTCATTCTTATA+GGG - chr3_3:17025252-17025271 Msa0444170:intron 40.0%
GGTGACTGTCATTCTTATAG+GGG - chr3_3:17025253-17025272 Msa0444170:intron 40.0%
GTGACTGTCATTCTTATAGG+GGG - chr3_3:17025254-17025273 Msa0444170:intron 40.0%
TCTTATAGGGGGAGTTTACT+CGG - chr3_3:17025265-17025284 Msa0444170:intron 40.0%
TTAATTTCATAGGCTGTGGG+CGG + chr3_3:17025412-17025431 None:intergenic 40.0%
AAACTGTGAACATGGATGAC+GGG - chr3_3:17025615-17025634 Msa0444170:five_prime_UTR 40.0%
ATTGGGATATGAGGGTTTGG+GGG + chr3_3:17016115-17016134 None:intergenic 45.0%
CATTGGGATATGAGGGTTTG+GGG + chr3_3:17016116-17016135 None:intergenic 45.0%
GTTGGAATTCTCCACGTGTA+AGG - chr3_3:17016294-17016313 Msa0444170:three_prime_UTR 45.0%
AGAGATGAAAGCCTTACACG+TGG + chr3_3:17016308-17016327 None:intergenic 45.0%
GTTTGATTGGAACGACGAAG+AGG - chr3_3:17016632-17016651 Msa0444170:three_prime_UTR 45.0%
GCTCAGATACTCTTCGGATT+AGG + chr3_3:17017057-17017076 None:intergenic 45.0%
! AAACTCTCTCTCTAGCTCAG+AGG + chr3_3:17017118-17017137 None:intergenic 45.0%
TCTGAGCTAGAGAGAGAGTT+TGG - chr3_3:17017117-17017136 Msa0444170:intron 45.0%
AGCTAGAGAGAGAGTTTGGA+GGG - chr3_3:17017121-17017140 Msa0444170:intron 45.0%
! CTAGTGGGCAAGTTTCTATG+AGG - chr3_3:17017169-17017188 Msa0444170:intron 45.0%
AGTTTCTATGAGGTCTACCG+TGG - chr3_3:17017179-17017198 Msa0444170:intron 45.0%
GACTAGGTTACCGTCTCATT+TGG - chr3_3:17017354-17017373 Msa0444170:three_prime_UTR 45.0%
!!! AAAAGGCGGCTTTTAGGACA+AGG + chr3_3:17017608-17017627 None:intergenic 45.0%
TTACTATTGCGCCAGACAGT+AGG - chr3_3:17017949-17017968 Msa0444170:intron 45.0%
GCCAGACAGTAGGTTAAGAA+TGG - chr3_3:17017959-17017978 Msa0444170:intron 45.0%
CCCATTCTTAACCTACTGTC+TGG + chr3_3:17017963-17017982 None:intergenic 45.0%
GACAGTAGACTTCTGAGTGA+AGG - chr3_3:17017989-17018008 Msa0444170:intron 45.0%
ACTTCTGAGTGAAGGACTGA+AGG - chr3_3:17017997-17018016 Msa0444170:intron 45.0%
!!! TTTTTTTTTTTGGGGGGGGG+GGG - chr3_3:17018236-17018255 Msa0444170:intron 45.0%
!! ACATAAGCGGCAAGTACTGA+TGG - chr3_3:17018370-17018389 Msa0444170:intron 45.0%
TATCCTTCCGTTGTTCCCAT+TGG - chr3_3:17018481-17018500 Msa0444170:intron 45.0%
TTGACTGCCAATGGGAACAA+CGG + chr3_3:17018491-17018510 None:intergenic 45.0%
TAGAAGCCTTGACTGCCAAT+GGG + chr3_3:17018499-17018518 None:intergenic 45.0%
AAGCATCCTGTTAGCAAGCT+AGG - chr3_3:17018682-17018701 Msa0444170:intron 45.0%
!! CATAGACCTAGCTTGCTAAC+AGG + chr3_3:17018691-17018710 None:intergenic 45.0%
CAAGCTAGGTCTATGTTGAG+AGG - chr3_3:17018696-17018715 Msa0444170:intron 45.0%
GCTTCCCTTACTGTCATGTT+AGG - chr3_3:17019864-17019883 Msa0444170:intron 45.0%
!! TCATATTGTGCCGTTTCCAG+AGG - chr3_3:17020173-17020192 Msa0444170:intron 45.0%
! TCTTCACTTGCCTCTGGAAA+CGG + chr3_3:17020186-17020205 None:intergenic 45.0%
TGAGTTTGCCACATATCCTG+AGG + chr3_3:17020346-17020365 None:intergenic 45.0%
CGAGGTGAACTTAGCAAACT+CGG - chr3_3:17020438-17020457 Msa0444170:three_prime_UTR 45.0%
CTTAGCAAACTCGGTACATC+AGG - chr3_3:17020447-17020466 Msa0444170:three_prime_UTR 45.0%
ACAGAAGAGACCACACAGAA+TGG - chr3_3:17020662-17020681 Msa0444170:intron 45.0%
AAGAGACCACACAGAATGGA+AGG - chr3_3:17020666-17020685 Msa0444170:intron 45.0%
AGAGACCACACAGAATGGAA+GGG - chr3_3:17020667-17020686 Msa0444170:intron 45.0%
TGCCGATGAAGGTAAAGAAC+AGG - chr3_3:17020709-17020728 Msa0444170:intron 45.0%
GCCGATGAAGGTAAAGAACA+GGG - chr3_3:17020710-17020729 Msa0444170:intron 45.0%
TAGCTGCACATAGGTTTCAC+AGG + chr3_3:17021017-17021036 None:intergenic 45.0%
TCACATCTTTAGCAGACCAG+AGG + chr3_3:17021418-17021437 None:intergenic 45.0%
! CTTAAAGCATCAGTGGGACT+TGG + chr3_3:17021473-17021492 None:intergenic 45.0%
CAAGTCCCACTGATGCTTTA+AGG - chr3_3:17021471-17021490 Msa0444170:CDS 45.0%
AAGGAATAGATCAGGGCCTT+TGG - chr3_3:17021490-17021509 Msa0444170:CDS 45.0%
! ACACACAACCGCTGATAATG+TGG - chr3_3:17021607-17021626 Msa0444170:CDS 45.0%
! GCTGATAATGTGGAATGTGC+TGG - chr3_3:17021617-17021636 Msa0444170:CDS 45.0%
!! CGGTTTTGTGGGATTGAGTT+AGG + chr3_3:17021945-17021964 None:intergenic 45.0%
CCGTTCATGTCCAACACTAT+TGG - chr3_3:17022064-17022083 Msa0444170:intron 45.0%
CATGTCCAACACTATTGGTG+AGG - chr3_3:17022069-17022088 Msa0444170:intron 45.0%
AAAGCCCTCACCAATAGTGT+TGG + chr3_3:17022077-17022096 None:intergenic 45.0%
! GGTGAGGGCTTTATGAATCT+AGG - chr3_3:17022085-17022104 Msa0444170:intron 45.0%
ACAAGAGGGGAAAGATTTGC+AGG - chr3_3:17022571-17022590 Msa0444170:intron 45.0%
GGTTGCCCAAGAATTGAAGA+GGG + chr3_3:17022680-17022699 None:intergenic 45.0%
TGGTTGCCCAAGAATTGAAG+AGG + chr3_3:17022681-17022700 None:intergenic 45.0%
! TCAGGTCCTAGGAGTTGATT+TGG + chr3_3:17022701-17022720 None:intergenic 45.0%
GGGAGGTTACCATAAAACGA+AGG + chr3_3:17022758-17022777 None:intergenic 45.0%
!! GTGTTAGCATTGGCATAGCA+GGG + chr3_3:17022778-17022797 None:intergenic 45.0%
!! TGTGTTAGCATTGGCATAGC+AGG + chr3_3:17022779-17022798 None:intergenic 45.0%
TCTGGGTATGAAACATCTGC+TGG - chr3_3:17022836-17022855 Msa0444170:intron 45.0%
! GAGCCCGCATAACTTTTCAA+AGG + chr3_3:17022872-17022891 None:intergenic 45.0%
! AGGAGTCATAGTTTGAGGCA+CGG + chr3_3:17022897-17022916 None:intergenic 45.0%
TCCTGAGGAGTCATAGTTTG+AGG + chr3_3:17022902-17022921 None:intergenic 45.0%
TACTAGTGCAAGGAACTTGG+TGG + chr3_3:17023000-17023019 None:intergenic 45.0%
AACCATATTGTGCAGGCTTC+AGG - chr3_3:17023171-17023190 Msa0444170:intron 45.0%
ATCCTGAAGCCTGCACAATA+TGG + chr3_3:17023176-17023195 None:intergenic 45.0%
CGTGCCCAAATTAGTATGCA+AGG + chr3_3:17023261-17023280 None:intergenic 45.0%
!! GCATCAGAGATAGCTTGTTC+CGG - chr3_3:17023334-17023353 Msa0444170:intron 45.0%
ACATGTTGACAGCGCAATCA+AGG + chr3_3:17024193-17024212 None:intergenic 45.0%
TGATACCAGCATGGTACGTA+CGG + chr3_3:17024236-17024255 None:intergenic 45.0%
TGGTATCACACAGATATGCC+AGG - chr3_3:17024248-17024267 Msa0444170:intron 45.0%
TGTTTCAACATCAGGCATCC+TGG + chr3_3:17024269-17024288 None:intergenic 45.0%
CATAGACCTGTGGAGTTAAC+AGG - chr3_3:17024331-17024350 Msa0444170:intron 45.0%
GGAGTCGCACATTTCAACTA+AGG - chr3_3:17024372-17024391 Msa0444170:intron 45.0%
TGGACCTCAAAAGATGGACA+AGG + chr3_3:17024505-17024524 None:intergenic 45.0%
AGATGTTCTGCAGAACACGA+AGG - chr3_3:17024614-17024633 Msa0444170:intron 45.0%
GAGCATGGAAGGAATAAGGT+AGG + chr3_3:17024645-17024664 None:intergenic 45.0%
GAGCTTGGTTATGATCCAGA+AGG + chr3_3:17024739-17024758 None:intergenic 45.0%
! CTGGTTCTCAGGATTCTACA+TGG + chr3_3:17024768-17024787 None:intergenic 45.0%
! CAAGCATGAAACTGGTTCTC+AGG + chr3_3:17024779-17024798 None:intergenic 45.0%
AGCACTTGCGACCTTAAGTA+TGG + chr3_3:17024870-17024889 None:intergenic 45.0%
TAATTTCATAGGCTGTGGGC+GGG + chr3_3:17025411-17025430 None:intergenic 45.0%
AATGAAAGCCGTGAGGAGTA+TGG - chr3_3:17025544-17025563 Msa0444170:five_prime_UTR 45.0%
ACTCTTGACCATACTCCTCA+CGG + chr3_3:17025555-17025574 None:intergenic 45.0%
! GAGGAGTATGGTCAAGAGTT+TGG - chr3_3:17025556-17025575 Msa0444170:five_prime_UTR 45.0%
!!! TAAAATAATTATTATGTTTT+TGG - chr3_3:17016892-17016911 Msa0444170:intron 5.0%
!!! AATTTTATATATGAATTTAA+TGG - chr3_3:17024685-17024704 Msa0444170:intron 5.0%
TTGGGATATGAGGGTTTGGG+GGG + chr3_3:17016114-17016133 None:intergenic 50.0%
AAATTGGAGGGGAAGAGAGG+GGG + chr3_3:17016181-17016200 None:intergenic 50.0%
GAAATTGGAGGGGAAGAGAG+GGG + chr3_3:17016182-17016201 None:intergenic 50.0%
CGAAATTGGAGGGGAAGAGA+GGG + chr3_3:17016183-17016202 None:intergenic 50.0%
CTCTGAGCTTGTGCTGAATC+CGG - chr3_3:17016529-17016548 Msa0444170:three_prime_UTR 50.0%
GAGCTAGAGAGAGAGTTTGG+AGG - chr3_3:17017120-17017139 Msa0444170:intron 50.0%
!! TAACCTAGTCGGTGCTGGTT+CGG + chr3_3:17017344-17017363 None:intergenic 50.0%
! TGGAGTGTAATGGAGATCGG+AGG - chr3_3:17018141-17018160 Msa0444170:intron 50.0%
!!! TTTTTTTTTTGGGGGGGGGG+GGG - chr3_3:17018237-17018256 Msa0444170:intron 50.0%
GTTGTTCCCATTGGCAGTCA+AGG - chr3_3:17018490-17018509 Msa0444170:three_prime_UTR 50.0%
GTAGAAGCCTTGACTGCCAA+TGG + chr3_3:17018500-17018519 None:intergenic 50.0%
AGGTCTATGTTGAGAGGAGC+AGG - chr3_3:17018702-17018721 Msa0444170:intron 50.0%
GGTCTATGTTGAGAGGAGCA+GGG - chr3_3:17018703-17018722 Msa0444170:intron 50.0%
AGGAGCAGGGATTGAAGTAG+AGG - chr3_3:17018716-17018735 Msa0444170:intron 50.0%
CATCCAAACGCGCAGATTCT+GGG + chr3_3:17019633-17019652 None:intergenic 50.0%
TCATCCAAACGCGCAGATTC+TGG + chr3_3:17019634-17019653 None:intergenic 50.0%
AATATGGGATGAGGGAGGTG+AGG - chr3_3:17020143-17020162 Msa0444170:intron 50.0%
ATATGGGATGAGGGAGGTGA+GGG - chr3_3:17020144-17020163 Msa0444170:intron 50.0%
ACAACTCGCCTCAGGATATG+TGG - chr3_3:17020335-17020354 Msa0444170:three_prime_UTR 50.0%
AGCAAACTCGGTACATCAGG+AGG - chr3_3:17020450-17020469 Msa0444170:three_prime_UTR 50.0%
AGCATCCCTTCCATTCTGTG+TGG + chr3_3:17020675-17020694 None:intergenic 50.0%
ACAGTTAGGACGGCAGAGTT+TGG + chr3_3:17020931-17020950 None:intergenic 50.0%
ACAACGGCATAGCTGCACAT+AGG + chr3_3:17021026-17021045 None:intergenic 50.0%
!! GTGCCCATGATGGGTAACAT+TGG - chr3_3:17021215-17021234 Msa0444170:three_prime_UTR 50.0%
!! GTGGGACTTGGTGTGTTCAA+TGG + chr3_3:17021461-17021480 None:intergenic 50.0%
!! AACCCACGAAACCGACTTGT+AGG - chr3_3:17022147-17022166 Msa0444170:intron 50.0%
! CACCTACAAGTCGGTTTCGT+GGG + chr3_3:17022152-17022171 None:intergenic 50.0%
! TCACCTACAAGTCGGTTTCG+TGG + chr3_3:17022153-17022172 None:intergenic 50.0%
!! ACGAAACCGACTTGTAGGTG+AGG - chr3_3:17022152-17022171 Msa0444170:intron 50.0%
!! CGAAACCGACTTGTAGGTGA+GGG - chr3_3:17022153-17022172 Msa0444170:intron 50.0%
AGCATCCCTCACCTACAAGT+CGG + chr3_3:17022161-17022180 None:intergenic 50.0%
GGGCAACCAAATCAACTCCT+AGG - chr3_3:17022692-17022711 Msa0444170:intron 50.0%
!! TTAGCATTGGCATAGCAGGG+AGG + chr3_3:17022775-17022794 None:intergenic 50.0%
GCCTCAAACTATGACTCCTC+AGG - chr3_3:17022898-17022917 Msa0444170:intron 50.0%
TGGGTGGCATATTTGAGCGA+CGG + chr3_3:17023026-17023045 None:intergenic 50.0%
TGGCACAAAGTGCAACGCAA+CGG - chr3_3:17023358-17023377 Msa0444170:intron 50.0%
! TTTTCCCGTACGTACCATGC+TGG - chr3_3:17024228-17024247 Msa0444170:intron 50.0%
GATACCAGCATGGTACGTAC+GGG + chr3_3:17024235-17024254 None:intergenic 50.0%
ACCAAGTGAACTTTCCCGTG+AGG - chr3_3:17024419-17024438 Msa0444170:intron 50.0%
ACCTCACGGGAAAGTTCACT+TGG + chr3_3:17024423-17024442 None:intergenic 50.0%
TCCTCTTGTAAGCACCTCAC+GGG + chr3_3:17024436-17024455 None:intergenic 50.0%
CTCCTCTTGTAAGCACCTCA+CGG + chr3_3:17024437-17024456 None:intergenic 50.0%
CATTGAGAGGCTTCAAGCTC+CGG + chr3_3:17024589-17024608 None:intergenic 50.0%
! AAGAAGCACGGCAATGAGCA+TGG + chr3_3:17024660-17024679 None:intergenic 50.0%
AATTTCATAGGCTGTGGGCG+GGG + chr3_3:17025410-17025429 None:intergenic 50.0%
CGATGACAATGAAAGCCGTG+AGG - chr3_3:17025537-17025556 Msa0444170:five_prime_UTR 50.0%
GTCGAGGATCCCTTTGCATT+AGG - chr3_3:17025656-17025675 Msa0444170:five_prime_UTR 50.0%
AATTGGAGGGGAAGAGAGGG+GGG + chr3_3:17016180-17016199 None:intergenic 55.0%
GCGAAATTGGAGGGGAAGAG+AGG + chr3_3:17016184-17016203 None:intergenic 55.0%
!!! TTTTTTTTTGGGGGGGGGGG+GGG - chr3_3:17018238-17018257 Msa0444170:intron 55.0%
CTGCCAATGGGAACAACGGA+AGG + chr3_3:17018487-17018506 None:intergenic 55.0%
GAACCCAGAATCTGCGCGTT+TGG - chr3_3:17019627-17019646 Msa0444170:intron 55.0%
AATGGAGGACAACTCGCCTC+AGG - chr3_3:17020327-17020346 Msa0444170:three_prime_UTR 55.0%
ACCTGCTGCTCGTGACCAAT+AGG + chr3_3:17021656-17021675 None:intergenic 55.0%
AGGCATCAGCATGTGCTCTC+TGG - chr3_3:17022818-17022837 Msa0444170:intron 55.0%
GGCATCAGCATGTGCTCTCT+GGG - chr3_3:17022819-17022838 Msa0444170:intron 55.0%
! GCGACGGGTTTACTAGTGCA+AGG + chr3_3:17023010-17023029 None:intergenic 55.0%
GGGTGGCATATTTGAGCGAC+GGG + chr3_3:17023025-17023044 None:intergenic 55.0%
!! CAGAGATAGCTTGTTCCGGC+TGG - chr3_3:17023338-17023357 Msa0444170:intron 55.0%
!! TTGGTTCGGGCTGTGCAGAA+TGG - chr3_3:17024019-17024038 Msa0444170:intron 55.0%
ACGGGCGACAGTTCGATCAA+TGG + chr3_3:17024302-17024321 None:intergenic 55.0%
! TCCCGTGAGGTGCTTACAAG+AGG - chr3_3:17024432-17024451 Msa0444170:intron 55.0%
AGCACGGCAATGAGCATGGA+AGG + chr3_3:17024656-17024675 None:intergenic 55.0%
!! ATGACGGGTGTGTGTGTGTG+TGG - chr3_3:17025630-17025649 Msa0444170:five_prime_UTR 55.0%
! TGACGGGTGTGTGTGTGTGT+GGG - chr3_3:17025631-17025650 Msa0444170:five_prime_UTR 55.0%
!! TTGCCGAACCAGCACCGACT+AGG - chr3_3:17017338-17017357 Msa0444170:three_prime_UTR 60.0%
GACGGTAACCTAGTCGGTGC+TGG + chr3_3:17017349-17017368 None:intergenic 60.0%
!!! TTTTTTTTGGGGGGGGGGGG+GGG - chr3_3:17018239-17018258 Msa0444170:intron 60.0%
GCCTATTGGTCACGAGCAGC+AGG - chr3_3:17021652-17021671 Msa0444170:CDS 60.0%
GCGTTGCACTTTGTGCCAGC+CGG + chr3_3:17023356-17023375 None:intergenic 60.0%
GAGAGGCTTCAAGCTCCGGT+GGG + chr3_3:17024585-17024604 None:intergenic 60.0%
TGAGAGGCTTCAAGCTCCGG+TGG + chr3_3:17024586-17024605 None:intergenic 60.0%
GACGGGTGTGTGTGTGTGTG+GGG - chr3_3:17025632-17025651 Msa0444170:five_prime_UTR 60.0%
TGTGTGTGTGTGGGGAGTCG+AGG - chr3_3:17025640-17025659 Msa0444170:five_prime_UTR 60.0%
!!! TTTTTTTGGGGGGGGGGGGG+GGG - chr3_3:17018240-17018259 Msa0444170:intron 65.0%
GGGGGGGGGGACTTTATCAG+AGG - chr3_3:17018262-17018281 Msa0444170:intron 65.0%
TGGGCACGGCTTCAATCCCG+AGG - chr3_3:17023273-17023292 Msa0444170:intron 65.0%
!!! TTTTTTGGGGGGGGGGGGGG+GGG - chr3_3:17018241-17018260 Msa0444170:intron 70.0%
GAGGCGGCGGCAGCAAATGC+AGG - chr3_3:17022937-17022956 Msa0444170:intron 70.0%
!! TTTTTGGGGGGGGGGGGGGG+GGG - chr3_3:17018242-17018261 Msa0444170:intron 75.0%
!!! TTTTGGGGGGGGGGGGGGGG+GGG - chr3_3:17018243-17018262 Msa0444170:intron 80.0%
! TTTGGGGGGGGGGGGGGGGG+GGG - chr3_3:17018244-17018263 Msa0444170:intron 85.0%
! TTGGGGGGGGGGGGGGGGGG+GGG - chr3_3:17018245-17018264 Msa0444170:intron 90.0%
! TGGGGGGGGGGGGGGGGGGG+GGG - chr3_3:17018246-17018265 Msa0444170:intron 95.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 17016101 17025853 17016101 ID=Msa0444170;Name=Msa0444170
chr3_3 mRNA 17016101 17025853 17016101 ID=Msa0444170-mRNA-1;Parent=Msa0444170;Name=Msa0444170-mRNA-1;_AED=0.06;_eAED=0.06;_QI=529|1|1|1|0.83|0.57|7|2420|131
chr3_3 exon 17016101 17016701 17016101 ID=Msa0444170-mRNA-1:exon:3548;Parent=Msa0444170-mRNA-1
chr3_3 exon 17017319 17017693 17017319 ID=Msa0444170-mRNA-1:exon:3547;Parent=Msa0444170-mRNA-1
chr3_3 exon 17018485 17018642 17018485 ID=Msa0444170-mRNA-1:exon:3546;Parent=Msa0444170-mRNA-1
chr3_3 exon 17018747 17019433 17018747 ID=Msa0444170-mRNA-1:exon:3545;Parent=Msa0444170-mRNA-1
chr3_3 exon 17020281 17020587 17020281 ID=Msa0444170-mRNA-1:exon:3544;Parent=Msa0444170-mRNA-1
chr3_3 exon 17021159 17021822 17021159 ID=Msa0444170-mRNA-1:exon:3543;Parent=Msa0444170-mRNA-1
chr3_3 exon 17025301 17025853 17025301 ID=Msa0444170-mRNA-1:exon:3542;Parent=Msa0444170-mRNA-1
chr3_3 five_prime_UTR 17025325 17025853 17025325 ID=Msa0444170-mRNA-1:five_prime_utr;Parent=Msa0444170-mRNA-1
chr3_3 CDS 17025301 17025324 17025301 ID=Msa0444170-mRNA-1:cds;Parent=Msa0444170-mRNA-1
chr3_3 CDS 17021451 17021822 17021451 ID=Msa0444170-mRNA-1:cds;Parent=Msa0444170-mRNA-1
chr3_3 three_prime_UTR 17021159 17021450 17021159 ID=Msa0444170-mRNA-1:three_prime_utr;Parent=Msa0444170-mRNA-1
chr3_3 three_prime_UTR 17020281 17020587 17020281 ID=Msa0444170-mRNA-1:three_prime_utr;Parent=Msa0444170-mRNA-1
chr3_3 three_prime_UTR 17018747 17019433 17018747 ID=Msa0444170-mRNA-1:three_prime_utr;Parent=Msa0444170-mRNA-1
chr3_3 three_prime_UTR 17018485 17018642 17018485 ID=Msa0444170-mRNA-1:three_prime_utr;Parent=Msa0444170-mRNA-1
chr3_3 three_prime_UTR 17017319 17017693 17017319 ID=Msa0444170-mRNA-1:three_prime_utr;Parent=Msa0444170-mRNA-1
chr3_3 three_prime_UTR 17016101 17016701 17016101 ID=Msa0444170-mRNA-1:three_prime_utr;Parent=Msa0444170-mRNA-1
Gene Sequence

>Msa0444170

ATGTTTGATTGGAACGACGAAGAGCTTGCTAATATAATATGGGATGAGGGAGGTGAGGGCGATGATCATATTGTGCCGTTTCCAGAGGCAAGTGAAGATCTTAAAAACAAGAAAGAAGTGAATCAGGAACCAGCTGTGTGTAAGCTTAATAAGCGGAAGCAACCCGAGACGAAAGCTGATTTTGATGGAAAACTAGGAAGCAGTTCGAACCTTAACAATAATGGAGGACAACTCGCCTCAGGATATGTGGCAAACTCATGCTCTGACTTGTCTTTATCCAGTGCAGCTAAAATTGATCAGGATTCTCTGAGTACTGAACTTTCTAAATATCGAGGTGAACTTAGCAAACTCGGTACATCAGGAGGTGATAAAATTGCTAATTACTGGAATGATTAG
Protein sequence

>Msa0444170

MFDWNDEELANIIWDEGGEGDDHIVPFPEASEDLKNKKEVNQEPAVCKLNKRKQPETKADFDGKLGSSSNLNNNGGQLASGYVANSCSDLSLSSAAKIDQDSLSTELSKYRGELSKLGTSGGDKIANYWND*