AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0491730

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0491730 MtrunA17_Chr3g0083841 88.872 665 30 7 1 632 1 654 0.0 1176
Msa0491730 MtrunA17_Chr2g0279081 40.559 143 73 3 437 572 490 627 4.80e-19 91.3
Msa0491730 MtrunA17_Chr4g0050491 31.364 220 127 7 335 543 333 539 6.87e-15 78.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0491730 AT3G54500.1 39.872 627 311 19 1 584 1 604 1.29e-111 349
Msa0491730 AT3G54500.7 40.127 628 309 20 1 584 1 605 1.73e-111 349
Msa0491730 AT3G54500.5 40.127 628 309 20 1 584 1 605 1.73e-111 349
Msa0491730 AT3G54500.3 38.240 659 309 21 1 584 1 636 1.21e-104 332
Msa0491730 AT3G54500.6 40.338 533 260 17 91 584 12 525 5.63e-94 301
Msa0491730 AT3G54500.8 40.338 533 260 17 91 584 12 525 5.63e-94 301
Msa0491730 AT3G54500.4 36.280 656 309 21 1 584 1 619 2.40e-90 294
Msa0491730 AT3G54500.2 40.000 360 173 11 259 584 59 409 2.98e-58 202
Msa0491730 AT5G64170.1 45.283 106 50 1 438 543 417 514 8.45e-20 94.0
Msa0491730 AT5G64170.3 45.283 106 50 1 438 543 467 564 9.51e-20 94.0
Msa0491730 AT5G64170.2 45.283 106 50 1 438 543 467 564 9.51e-20 94.0

Find 198 sgRNAs with CRISPR-Local

Find 666 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCATAATCCTAGACTATTTA+TGG 0.053603 3_4:+14639517 None:intergenic
CTTAACTACGAAAAGATTTC+TGG 0.141989 3_4:-14643418 Msa0491730:CDS
TTCAGCTTGCTAATATAATA+TGG 0.167194 3_4:-14644853 Msa0491730:intron
GTCAATACTTGGCATGATTT+TGG 0.190706 3_4:-14639653 Msa0491730:three_prime_UTR
CTAATTTAAACTAATTTATT+AGG 0.190895 3_4:-14648720 Msa0491730:five_prime_UTR
ATGATGTTCTGATATGTTTC+AGG 0.210886 3_4:+14642259 None:intergenic
CCACAGCCTATGAAATTAAT+AGG 0.214453 3_4:-14639562 Msa0491730:three_prime_UTR
TCATCTCCCTCTTCAATTCT+TGG 0.243129 3_4:-14642304 Msa0491730:CDS
AGCAATGATGACCCTATATT+TGG 0.245263 3_4:-14643610 Msa0491730:CDS
CATAGACCTGTGGAGTTAAC+AGG 0.252015 3_4:-14640644 Msa0491730:CDS
GAAGGATAACCATGATTTAA+TGG 0.253110 3_4:+14639267 None:intergenic
CAAGTCCCACTGATGCTTTA+AGG 0.257456 3_4:-14643504 Msa0491730:CDS
CTACGTCTACAGTTTGATTC+TGG 0.271489 3_4:-14648414 Msa0491730:five_prime_UTR
TTTGCATTAGGTATCAAAAT+TGG 0.273201 3_4:-14639307 Msa0491730:three_prime_UTR
AGGCATCAGCATGTGCTCTC+TGG 0.298254 3_4:-14642157 Msa0491730:CDS
AACCATATTGTGCAGGCTTC+AGG 0.302174 3_4:-14641804 Msa0491730:CDS
TTAGTTTAAATTAGTTTGAT+AGG 0.317890 3_4:+14648729 None:intergenic
GGGCGACTGTCATTCTTATA+GGG 0.320523 3_4:-14639723 Msa0491730:three_prime_UTR
TTTAGCCCTATTAATTTCAT+AGG 0.326093 3_4:+14639556 None:intergenic
AGGGCGACTGTCATTCTTAT+AGG 0.331707 3_4:-14639724 Msa0491730:three_prime_UTR
GAATCATCTTGTTCAATTAG+AGG 0.333648 3_4:+14641869 None:intergenic
AGACTTGCATGGCCAAATAT+AGG 0.334235 3_4:+14643598 None:intergenic
ACATTGGGATATGAGGGTTT+GGG 0.351400 3_4:+14648863 None:intergenic
CCATAAATAGTCTAGGATTA+TGG 0.353557 3_4:-14639517 Msa0491730:three_prime_UTR
GAGGAGAATGGTCAAGAGTT+TGG 0.356043 3_4:-14639419 Msa0491730:three_prime_UTR
AGTTTCAGTCAGGAAATCTT+AGG 0.358237 3_4:-14642177 Msa0491730:intron
ATAAAATACATTGGGATATG+AGG 0.358802 3_4:+14648856 None:intergenic
TACATTGGGATATGAGGGTT+TGG 0.362187 3_4:+14648862 None:intergenic
TCAGGTCCTAGGAGTTGATT+TGG 0.365895 3_4:+14642277 None:intergenic
AGATTGGAGGGGAAGAGAGG+GGG 0.368946 3_4:+14648799 None:intergenic
TTATGCATTATTTGCGAGAT+TGG 0.369088 3_4:+14648783 None:intergenic
ACAAGAGGGGAAAGATTTGC+AGG 0.375758 3_4:-14642404 Msa0491730:CDS
AGGAAATTATTCTGACAAAC+TGG 0.382761 3_4:-14640624 Msa0491730:CDS
CATTGAGAGGCTTCAAGCTC+CGG 0.383942 3_4:+14640389 None:intergenic
ATCCTGAAGCCTGCACAATA+TGG 0.385534 3_4:+14641802 None:intergenic
TTCGTCTCTGTTTCAACATC+AGG 0.385600 3_4:+14640701 None:intergenic
GATTGGAGGGGAAGAGAGGG+GGG 0.388572 3_4:+14648800 None:intergenic
CATCTCCCTCTTCAATTCTT+GGG 0.389661 3_4:-14642303 Msa0491730:CDS
ATCAACAACTTTCTCACATT+GGG 0.390601 3_4:-14640505 Msa0491730:CDS
AAGGAATAGATCAGGGCCTT+TGG 0.396684 3_4:-14643485 Msa0491730:CDS
TCAGCTTGCTAATATAATAT+GGG 0.399569 3_4:-14644852 Msa0491730:intron
TGCCGATGAAGGTAAAGAAC+AGG 0.402038 3_4:-14644271 Msa0491730:CDS
AAACAAGAAAGAAGTGAATC+AGG 0.402238 3_4:-14644768 Msa0491730:CDS
AGTTCGAACCTTAACAATAA+TGG 0.402335 3_4:-14644671 Msa0491730:CDS
TCAACTATTGACAGTCTTCA+AGG 0.407629 3_4:+14639465 None:intergenic
TCTAAATATCGAGGTGAACT+TGG 0.407904 3_4:-14644551 Msa0491730:CDS
GAGGCGGCGGCAGCAAATGC+AGG 0.413237 3_4:-14642038 Msa0491730:CDS
CGAGATTGGAGGGGAAGAGA+GGG 0.415579 3_4:+14648797 None:intergenic
AACATTTAGCCATTAAATCA+TGG 0.418684 3_4:-14639276 Msa0491730:three_prime_UTR
GTTGGAATTCTCCACGTGTA+AGG 0.421633 3_4:-14648683 Msa0491730:five_prime_UTR
GTCGAGGATCCCTTTGCATT+AGG 0.425641 3_4:-14639319 Msa0491730:three_prime_UTR
CATTGGGATATGAGGGTTTG+GGG 0.426394 3_4:+14648864 None:intergenic
GACTTGCATGGCCAAATATA+GGG 0.428786 3_4:+14643599 None:intergenic
TCAAAATCAGCTTTCGTCTC+GGG 0.429670 3_4:+14644710 None:intergenic
CAGGTCTATGAAAGAGTAAA+CGG 0.431253 3_4:+14640657 None:intergenic
GTTGTCCTCCATTATTGTTA+AGG 0.431483 3_4:+14644663 None:intergenic
GAGATTGGAGGGGAAGAGAG+GGG 0.436667 3_4:+14648798 None:intergenic
TAAAACGAAGGTGCCACATA+TGG 0.437704 3_4:+14642232 None:intergenic
TTAAGATCTTCACTTGCCTC+TGG 0.438774 3_4:+14644791 None:intergenic
AAGAAAGCAGTAGCCAAAAC+AGG 0.439156 3_4:-14641527 Msa0491730:intron
TCCTGAGGAGTCATAGTTTG+AGG 0.439185 3_4:+14642076 None:intergenic
CTTGGCAAACTCGGTACATC+AGG 0.440465 3_4:-14644533 Msa0491730:CDS
TGAAGACTGTCAATAGTTGA+TGG 0.440651 3_4:-14639462 Msa0491730:three_prime_UTR
CTAGAATGACTTTGAATTTG+TGG 0.441648 3_4:+14641932 None:intergenic
ACCCTGTTCTTTACCTTCAT+CGG 0.444276 3_4:+14644269 None:intergenic
TCAGAAACAACAGCAAGTAC+TGG 0.445349 3_4:-14642002 Msa0491730:CDS
GGCATCAGCATGTGCTCTCT+GGG 0.448646 3_4:-14642156 Msa0491730:CDS
TTGCATTTCAAGTCAATACT+TGG 0.450375 3_4:-14639664 Msa0491730:three_prime_UTR
ATCAAAATCAGCTTTCGTCT+CGG 0.454688 3_4:+14644709 None:intergenic
ACCTGCTGCTCGTGACCAAT+AGG 0.454851 3_4:+14643322 None:intergenic
GATGCTTTAAGGAATAGATC+AGG 0.456030 3_4:-14643493 Msa0491730:CDS
CACAGCCTATGAAATTAATA+GGG 0.457054 3_4:-14639561 Msa0491730:three_prime_UTR
AAGTAATCTAAAATCTTAGA+AGG 0.460080 3_4:+14639249 None:intergenic
GCATCAGAGATAGCTTGTTC+CGG 0.460936 3_4:-14641641 Msa0491730:CDS
GCGAGATTGGAGGGGAAGAG+AGG 0.465919 3_4:+14648796 None:intergenic
CTCTGAGCTTGTGCTGAATC+CGG 0.465928 3_4:-14648454 Msa0491730:five_prime_UTR
CCTATTAATTTCATAGGCTG+TGG 0.465987 3_4:+14639562 None:intergenic
CTTAAAGCATCAGTGGGACT+TGG 0.466899 3_4:+14643505 None:intergenic
TAATTTCATAGGCTGTGGGC+GGG 0.467199 3_4:+14639567 None:intergenic
GTTTACTAGTGCAAGGAACT+TGG 0.467995 3_4:+14641975 None:intergenic
TCTTAGTCTGATCCATAGGT+TGG 0.470108 3_4:+14640453 None:intergenic
TTTACCTGAAAATCCGATCA+AGG 0.472813 3_4:+14644202 None:intergenic
CAGAGATAGCTTGTTCCGGC+TGG 0.473135 3_4:-14641637 Msa0491730:CDS
TGGAAGAAATAAAATACATT+GGG 0.475165 3_4:+14648848 None:intergenic
CAGTGCAGCTAAAATTGATC+AGG 0.475398 3_4:-14644594 Msa0491730:CDS
TAAAATACATTGGGATATGA+GGG 0.477019 3_4:+14648857 None:intergenic
TGTTTCAACATCAGGCATCC+TGG 0.477705 3_4:+14640709 None:intergenic
TAGAATGACTTTGAATTTGT+GGG 0.479013 3_4:+14641933 None:intergenic
AACATGATACCAAGATTCAA+TGG 0.479741 3_4:+14639184 None:intergenic
ACGGGCGACAGTTCGATCAA+TGG 0.480071 3_4:+14640676 None:intergenic
TCTTCACTTGCCTCTGGAAA+CGG 0.482423 3_4:+14644797 None:intergenic
TTGAAGAAACCATATTGTGC+AGG 0.486319 3_4:-14641811 Msa0491730:CDS
GCCTATTGGTCACGAGCAGC+AGG 0.486485 3_4:-14643323 Msa0491730:intron
GCATTATTTGCGAGATTGGA+GGG 0.486496 3_4:+14648787 None:intergenic
CTGTTCTTAGTCTGATCCAT+AGG 0.489070 3_4:+14640449 None:intergenic
TTATTAAGCTTACACACAGC+TGG 0.490921 3_4:+14644743 None:intergenic
TGCAAAATCGACAAAGAAAA+CGG 0.495430 3_4:+14648626 None:intergenic
TGCATTATTTGCGAGATTGG+AGG 0.498147 3_4:+14648786 None:intergenic
CGAGGTGAACTTGGCAAACT+CGG 0.498240 3_4:-14644542 Msa0491730:CDS
TTGATAATTCTGATGACCTC+TGG 0.501202 3_4:-14643576 Msa0491730:CDS
AATCAACAACTTTCTCACAT+TGG 0.505289 3_4:-14640506 Msa0491730:CDS
TCTGATATGTTTCAGGTCCT+AGG 0.507149 3_4:+14642266 None:intergenic
GGGTGGCATATTTGAGCGAC+GGG 0.507311 3_4:+14641953 None:intergenic
GTGGAAGAAATAAAATACAT+TGG 0.508139 3_4:+14648847 None:intergenic
GCGTTGCACTTTGTGCCAGC+CGG 0.508304 3_4:+14641622 None:intergenic
ATATGGGATGAGGGAGGTGA+GGG 0.508521 3_4:-14644836 Msa0491730:CDS
TGCTAATATAATATGGGATG+AGG 0.509213 3_4:-14644846 Msa0491730:CDS
TAATTTCCTGTTAACTCCAC+AGG 0.509907 3_4:+14640638 None:intergenic
TTGGGATATGAGGGTTTGGG+GGG 0.520694 3_4:+14648866 None:intergenic
TGAATGTAACCATTGAATCT+TGG 0.522300 3_4:-14639193 Msa0491730:three_prime_UTR
GGAGATAGAAGTAAGCCTAT+TGG 0.522652 3_4:-14643337 Msa0491730:CDS
GAACATCTTTCTTCATTGAG+AGG 0.523735 3_4:+14640376 None:intergenic
ATTGGGATATGAGGGTTTGG+GGG 0.524271 3_4:+14648865 None:intergenic
AATGAAAGCCGTGAGGAGAA+TGG 0.526322 3_4:-14639431 Msa0491730:three_prime_UTR
CTTTAATCCATAAATAGTCT+AGG 0.527262 3_4:-14639524 Msa0491730:three_prime_UTR
CAGAAACAACAGCAAGTACT+GGG 0.527304 3_4:-14642001 Msa0491730:CDS
GCCTCAAACTATGACTCCTC+AGG 0.528024 3_4:-14642077 Msa0491730:CDS
GAGAAAGAGAAAGAATAATA+CGG 0.528553 3_4:+14648543 None:intergenic
TGAGAGGCTTCAAGCTCCGG+TGG 0.529498 3_4:+14640392 None:intergenic
AATTTCATAGGCTGTGGGCG+GGG 0.530106 3_4:+14639568 None:intergenic
AATGGAGGACAACTCGCCTC+AGG 0.533027 3_4:-14644653 Msa0491730:CDS
ACACACAACCGCTGATAATG+TGG 0.533964 3_4:-14643368 Msa0491730:CDS
TGTTCTTCTTTGATTTCCAA+AGG 0.534602 3_4:+14643469 None:intergenic
ACAGAAGAGACCACACAGAA+TGG 0.537046 3_4:-14644318 Msa0491730:intron
CTCCTCTTGTAAGCACCTCA+CGG 0.538906 3_4:+14640541 None:intergenic
GTGGGACTTGGTGTGTTCAA+TGG 0.542667 3_4:+14643517 None:intergenic
AAGAGACCACACAGAATGGA+AGG 0.545204 3_4:-14644314 Msa0491730:CDS
GGGCAACCAAATCAACTCCT+AGG 0.545576 3_4:-14642283 Msa0491730:CDS
AGGTCTATGAAAGAGTAAAC+GGG 0.548734 3_4:+14640658 None:intergenic
AATATGGGATGAGGGAGGTG+AGG 0.553046 3_4:-14644837 Msa0491730:CDS
TCTGGGTATGAAACATCTGC+TGG 0.554617 3_4:-14642139 Msa0491730:CDS
TCCTCTTGTAAGCACCTCAC+GGG 0.556291 3_4:+14640542 None:intergenic
TGGGTGGCATATTTGAGCGA+CGG 0.557181 3_4:+14641952 None:intergenic
GGAGTCGCACATTTCAACTA+AGG 0.558889 3_4:-14640603 Msa0491730:CDS
CTATTAATTTCATAGGCTGT+GGG 0.559216 3_4:+14639563 None:intergenic
ACCTCACGGGAAAGTTCACT+TGG 0.559508 3_4:+14640555 None:intergenic
TCCCGTGAGGTGCTTACAAG+AGG 0.560420 3_4:-14640543 Msa0491730:CDS
TACTAGTGCAAGGAACTTGG+TGG 0.564162 3_4:+14641978 None:intergenic
ATAGGTTGGACCTCAAAAGA+TGG 0.564515 3_4:+14640467 None:intergenic
GATTATGACTGGGCTAACAT+AGG 0.566174 3_4:-14644237 Msa0491730:CDS
ACAACTCGCCTCAGGATATG+TGG 0.569743 3_4:-14644645 Msa0491730:CDS
GCTGATAATGTGGAATGTGC+TGG 0.572272 3_4:-14643358 Msa0491730:CDS
TTAATTTCATAGGCTGTGGG+CGG 0.572409 3_4:+14639566 None:intergenic
TTGGTCTTCTTCAGCAACAT+CGG 0.578822 3_4:-14642368 Msa0491730:CDS
GAACATCATAAATCCATATG+TGG 0.579709 3_4:-14642245 Msa0491730:CDS
AGTCCTTTGAAAAGTTATGC+GGG 0.588913 3_4:-14642109 Msa0491730:CDS
CATTATTTGCGAGATTGGAG+GGG 0.589152 3_4:+14648788 None:intergenic
GCTTCAGGATGTTATATCAA+AGG 0.593187 3_4:-14641789 Msa0491730:intron
TTTACTCTTTCATAGACCTG+TGG 0.593278 3_4:-14640654 Msa0491730:CDS
CAGAATTATCAAGACTTGCA+TGG 0.593394 3_4:+14643587 None:intergenic
GCTAATATAATATGGGATGA+GGG 0.595943 3_4:-14644845 Msa0491730:CDS
AAAGTCAAAGATAAAACAAG+AGG 0.596219 3_4:-14642419 Msa0491730:CDS
ATGTAAGTAAACTGTGAACA+TGG 0.597596 3_4:-14639368 Msa0491730:three_prime_UTR
GGCGACTGTCATTCTTATAG+GGG 0.597882 3_4:-14639722 Msa0491730:three_prime_UTR
TGGTATCACACAGATATGCC+AGG 0.598969 3_4:-14640727 Msa0491730:intron
TGGTTGCCCAAGAATTGAAG+AGG 0.600589 3_4:+14642297 None:intergenic
TCTATTCCTTAAAGCATCAG+TGG 0.602291 3_4:+14643498 None:intergenic
ACTCTTGACCATTCTCCTCA+CGG 0.607110 3_4:+14639423 None:intergenic
GAGTCCTTTGAAAAGTTATG+CGG 0.609075 3_4:-14642110 Msa0491730:CDS
AGCATCCCTTCCATTCTGTG+TGG 0.615267 3_4:+14644308 None:intergenic
AAGTCAAAGATAAAACAAGA+GGG 0.616841 3_4:-14642418 Msa0491730:CDS
ATGCTTTAAGGAATAGATCA+GGG 0.618514 3_4:-14643492 Msa0491730:CDS
GGTTGCCCAAGAATTGAAGA+GGG 0.618924 3_4:+14642298 None:intergenic
AGAATTAGCTCAATCATCGC+CGG 0.619218 3_4:+14648435 None:intergenic
TCATATTGTGCCGTTTCCAG+AGG 0.620272 3_4:-14644807 Msa0491730:CDS
GGCAAACTCGGTACATCAGG+AGG 0.624925 3_4:-14644530 Msa0491730:intron
AAACTGTGAACATGGATGAC+GGG 0.625718 3_4:-14639360 Msa0491730:three_prime_UTR
CTATTCCTTAAAGCATCAGT+GGG 0.628176 3_4:+14643499 None:intergenic
GCGACGGGTTTACTAGTGCA+AGG 0.628579 3_4:+14641968 None:intergenic
TGGCACAAAGTGCAACGCAA+CGG 0.633011 3_4:-14641617 Msa0491730:CDS
GGAGATGATTGTAACACAGA+AGG 0.635671 3_4:+14642319 None:intergenic
AGAAAATGCATCTAACCCAC+CGG 0.636962 3_4:-14640408 Msa0491730:CDS
ACTAAGAACAGTCTCAGCAT+AGG 0.640882 3_4:-14640437 Msa0491730:CDS
AGGAGTCATAGTTTGAGGCA+CGG 0.641324 3_4:+14642081 None:intergenic
GTTTGATTGGAACGACGAAG+AGG 0.641530 3_4:-14648351 Msa0491730:intron
GAGAGGCTTCAAGCTCCGGT+GGG 0.642429 3_4:+14640393 None:intergenic
AATGCAATCAATGTGAAATG+AGG 0.642544 3_4:+14639680 None:intergenic
AGCACATTCCACATTATCAG+CGG 0.644887 3_4:+14643360 None:intergenic
CTGTGTGTAAGCTTAATAAG+CGG 0.656424 3_4:-14644739 Msa0491730:CDS
ATCGACAAAGAAAACGGTAA+CGG 0.660108 3_4:+14648632 None:intergenic
TCGAACCTTAACAATAATGG+AGG 0.660791 3_4:-14644668 Msa0491730:CDS
AATATAATATGGGATGAGGG+AGG 0.660916 3_4:-14644842 Msa0491730:CDS
ACTGAACTTTCTAAATATCG+AGG 0.661650 3_4:-14644560 Msa0491730:CDS
GCGACTGTCATTCTTATAGG+GGG 0.662361 3_4:-14639721 Msa0491730:three_prime_UTR
GCCGATGAAGGTAAAGAACA+GGG 0.663411 3_4:-14644270 Msa0491730:CDS
AGAGACCACACAGAATGGAA+GGG 0.665511 3_4:-14644313 Msa0491730:CDS
AATGACTTTGAATTTGTGGG+TGG 0.666637 3_4:+14641936 None:intergenic
TAAACTGTGAACATGGATGA+CGG 0.670853 3_4:-14639361 Msa0491730:three_prime_UTR
TGAGTTTGCCACATATCCTG+AGG 0.676069 3_4:+14644637 None:intergenic
AGTCAAAGATAAAACAAGAG+GGG 0.681406 3_4:-14642417 Msa0491730:CDS
AAAAGTACCAGTTGAAAACA+CGG 0.682824 3_4:-14642444 Msa0491730:CDS
TGGACCTCAAAAGATGGACA+AGG 0.698672 3_4:+14640473 None:intergenic
ACCAAGTGAACTTTCCCGTG+AGG 0.703337 3_4:-14640556 Msa0491730:CDS
AGAGATGAAAGCCTTACACG+TGG 0.707131 3_4:+14648672 None:intergenic
AGATGTTCTGCAGAACACGA+AGG 0.707819 3_4:-14640361 Msa0491730:intron
TCACATCTTTAGCAGACCAG+AGG 0.711109 3_4:+14643560 None:intergenic
GGGAGGTTACCATAAAACGA+AGG 0.728180 3_4:+14642220 None:intergenic
CGATGACAATGAAAGCCGTG+AGG 0.730153 3_4:-14639438 Msa0491730:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTAATTTAAACTAATTTATT+AGG - chr3_4:14639300-14639319 Msa0491730:three_prime_UTR 10.0%
!!! TTTTTTTTTGTATTTAATCT+TGG - chr3_4:14639717-14639736 Msa0491730:three_prime_UTR 10.0%
!! ATAAAAAAAAAAAAAAAAGG+CGG + chr3_4:14640659-14640678 None:intergenic 10.0%
!! ACCATAAAAAAAAAAAAAAA+AGG + chr3_4:14640662-14640681 None:intergenic 10.0%
!!! ATACATCTTTTTTTTTTTTT+TGG - chr3_4:14641260-14641279 Msa0491730:intron 10.0%
!!! TACATCTTTTTTTTTTTTTT+GGG - chr3_4:14641261-14641280 Msa0491730:intron 10.0%
!! TTACATATTAACAATAAAAA+TGG + chr3_4:14642266-14642285 None:intergenic 10.0%
!! ATAATATCATTGTTTAATAA+TGG - chr3_4:14643138-14643157 Msa0491730:intron 10.0%
!! TATTAGATATAGAATAATAT+AGG + chr3_4:14643852-14643871 None:intergenic 10.0%
!! AAATAAAAAAAAAAAAGTTC+CGG - chr3_4:14644283-14644302 Msa0491730:CDS 10.0%
!!! AGATTATCAAATAAATTTTA+TGG + chr3_4:14646948-14646967 None:intergenic 10.0%
!!! CATAATTTTTATTAAGAAAT+AGG - chr3_4:14648626-14648645 Msa0491730:five_prime_UTR 10.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr3_4:14641281-14641300 Msa0491730:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr3_4:14641281-14641300 Msa0491730:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr3_4:14641281-14641300 Msa0491730:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr3_4:14641281-14641300 Msa0491730:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr3_4:14641281-14641300 Msa0491730:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr3_4:14641281-14641300 Msa0491730:intron 100.0%
!!! TTAGTTTAAATTAGTTTGAT+AGG + chr3_4:14639294-14639313 None:intergenic 15.0%
!! TAGGAAAAAAAAATATTAGT+TGG - chr3_4:14639319-14639338 Msa0491730:three_prime_UTR 15.0%
!!! ATTTTTAAGAAATGTTTGAT+TGG - chr3_4:14639656-14639675 Msa0491730:three_prime_UTR 15.0%
!!! TTATTTTTTTGTGTTTTGTT+CGG - chr3_4:14639792-14639811 Msa0491730:intron 15.0%
!!! CAATTATAATTTGATTTTTG+AGG - chr3_4:14640324-14640343 Msa0491730:intron 15.0%
!!! GCCTTTTTTTTTTTTTTTTA+TGG - chr3_4:14640658-14640677 Msa0491730:CDS 15.0%
!!! ACATCTTTTTTTTTTTTTTG+GGG - chr3_4:14641262-14641281 Msa0491730:intron 15.0%
!! TTACTATATGTAATAAACAA+AGG + chr3_4:14641342-14641361 None:intergenic 15.0%
!! TTACATATTTACAACAAAAA+TGG + chr3_4:14642223-14642242 None:intergenic 15.0%
!!! ATTATTGGAACAATATTTTA+TGG - chr3_4:14642362-14642381 Msa0491730:CDS 15.0%
!!! TTATTGGAACAATATTTTAT+GGG - chr3_4:14642363-14642382 Msa0491730:CDS 15.0%
!!! GGTTAATTCTAAAAAATTTT+GGG - chr3_4:14642384-14642403 Msa0491730:CDS 15.0%
!!! AAAAATATTGACTTCAAAAT+AGG - chr3_4:14642457-14642476 Msa0491730:CDS 15.0%
!!! AAAATATTGACTTCAAAATA+GGG - chr3_4:14642458-14642477 Msa0491730:intron 15.0%
!!! TAGTGATTGAAAATTTTATA+GGG - chr3_4:14642489-14642508 Msa0491730:intron 15.0%
!! TTAAACAATGATATTATTGA+CGG + chr3_4:14643135-14643154 None:intergenic 15.0%
!!! CATTATTTTTCATATTATGA+CGG + chr3_4:14643630-14643649 None:intergenic 15.0%
!! AAAATAACAGAATAAATTCT+TGG + chr3_4:14645534-14645553 None:intergenic 15.0%
!!! TGGATATCAAATAAATTTTA+TGG + chr3_4:14646928-14646947 None:intergenic 15.0%
!!! TAAACCTATGATTTTTATTT+TGG - chr3_4:14648123-14648142 Msa0491730:intron 15.0%
!! AAATCCAAAATAAAAATCAT+AGG + chr3_4:14648130-14648149 None:intergenic 15.0%
!!! TTTTATTTTGGATTTAAGTA+TGG - chr3_4:14648135-14648154 Msa0491730:intron 15.0%
!!! TTTATTTTGGATTTAAGTAT+GGG - chr3_4:14648136-14648155 Msa0491730:intron 15.0%
!!! ACTTATTTTTCAAACATTAT+CGG + chr3_4:14648412-14648431 None:intergenic 15.0%
!! TGGAAGAAATAAAATACATT+GGG + chr3_4:14639175-14639194 None:intergenic 20.0%
!!! TTTGGTAATTAAAGATCTTA+AGG - chr3_4:14639946-14639965 Msa0491730:intron 20.0%
!!! TCATTTTCTCAAACTATTAT+CGG + chr3_4:14640004-14640023 None:intergenic 20.0%
!!! ATAGTTCTTAATTAGTTTTG+AGG - chr3_4:14640176-14640195 Msa0491730:intron 20.0%
!! GAATTATAAGAGTTGTTAAA+TGG + chr3_4:14640623-14640642 None:intergenic 20.0%
!! TTATGGTAATAGCATTATTT+AGG - chr3_4:14640675-14640694 Msa0491730:CDS 20.0%
!!! TGAAAGTATTTTTTCAGATA+TGG - chr3_4:14640790-14640809 Msa0491730:intron 20.0%
!! ATATCAACTATATTCAACTT+CGG + chr3_4:14640874-14640893 None:intergenic 20.0%
!!! AAGTTGAATATAGTTGATAT+AGG - chr3_4:14640874-14640893 Msa0491730:intron 20.0%
!!! ATAGTTGATATAGGTTTATA+TGG - chr3_4:14640883-14640902 Msa0491730:intron 20.0%
!!! CATCTTTTTTTTTTTTTTGG+GGG - chr3_4:14641263-14641282 Msa0491730:intron 20.0%
!!! ATCTTTTTTTTTTTTTTGGG+GGG - chr3_4:14641264-14641283 Msa0491730:intron 20.0%
!!! TTATGTCCATGTTTTATAAA+AGG + chr3_4:14641393-14641412 None:intergenic 20.0%
!! TATTCCCTAAAAAAAAAGTA+CGG - chr3_4:14641442-14641461 Msa0491730:intron 20.0%
!!! CAGCTCTATTTTTTTTTTTT+GGG - chr3_4:14641592-14641611 Msa0491730:CDS 20.0%
!!! TCTATTTTTTTTTTTTGGGA+GGG - chr3_4:14641596-14641615 Msa0491730:CDS 20.0%
!! AATTACAATTCATTATCTGT+GGG + chr3_4:14641932-14641951 None:intergenic 20.0%
!!! TAACAAAAGTATTGCATATA+AGG + chr3_4:14642091-14642110 None:intergenic 20.0%
!!! CAATACTTTTGTTATATGTA+TGG - chr3_4:14642097-14642116 Msa0491730:CDS 20.0%
!! TATATCCAATATATTGTTTG+TGG - chr3_4:14642147-14642166 Msa0491730:CDS 20.0%
!! ATATCCAATATATTGTTTGT+GGG - chr3_4:14642148-14642167 Msa0491730:CDS 20.0%
!! AATATTGTTCCAATAATTAC+AGG + chr3_4:14642359-14642378 None:intergenic 20.0%
!!! GGGTTAATTCTAAAAAATTT+TGG - chr3_4:14642383-14642402 Msa0491730:CDS 20.0%
!!! GTAGTGATTGAAAATTTTAT+AGG - chr3_4:14642488-14642507 Msa0491730:intron 20.0%
!! AAAAATTTCAACACTAAACT+AGG - chr3_4:14642795-14642814 Msa0491730:intron 20.0%
!! AACATTTATACAATTAGGAA+TGG + chr3_4:14643680-14643699 None:intergenic 20.0%
!! TGTCAAACATTTATACAATT+AGG + chr3_4:14643685-14643704 None:intergenic 20.0%
!! ATAAAAGTCTTGGATTTATT+TGG - chr3_4:14643908-14643927 Msa0491730:intron 20.0%
!!! TTTTACAGGAATAAATTTGA+AGG + chr3_4:14644048-14644067 None:intergenic 20.0%
!! AAAATCATTCAAAGTGAAAA+AGG - chr3_4:14644108-14644127 Msa0491730:intron 20.0%
!!! AGTTTATCTTTTGGAAAATT+TGG + chr3_4:14644943-14644962 None:intergenic 20.0%
!! TTTCCAAAAGATAAACTTAT+TGG - chr3_4:14644946-14644965 Msa0491730:intron 20.0%
!! TTCCAAAAGATAAACTTATT+GGG - chr3_4:14644947-14644966 Msa0491730:intron 20.0%
!!! TCTGATACCATTTTAAATTT+AGG - chr3_4:14645159-14645178 Msa0491730:intron 20.0%
!! GTAAGATCCTAAATTTAAAA+TGG + chr3_4:14645169-14645188 None:intergenic 20.0%
!!! TAAATAAGAGTATAAGACAT+TGG - chr3_4:14646648-14646667 Msa0491730:intron 20.0%
!! TAAAATTGAATAAAGAAGCA+CGG + chr3_4:14647717-14647736 None:intergenic 20.0%
!!! GTTTTAAACGATATGTATAT+TGG - chr3_4:14647874-14647893 Msa0491730:intron 20.0%
!! TAAATCATTGTTGCATAATA+AGG + chr3_4:14648078-14648097 None:intergenic 20.0%
!! AATTCAAGTAATTGATATGA+AGG + chr3_4:14648273-14648292 None:intergenic 20.0%
!!! TATCAATTACTTGAATTTTC+AGG - chr3_4:14648276-14648295 Msa0491730:intron 20.0%
!!! ATCAATTACTTGAATTTTCA+GGG - chr3_4:14648277-14648296 Msa0491730:intron 20.0%
!!! AAGTAATCTAAAATCTTAGA+AGG + chr3_4:14648774-14648793 None:intergenic 20.0%
!!! TTCTAAGATTTTAGATTACT+TGG - chr3_4:14648773-14648792 Msa0491730:five_prime_UTR 20.0%
!!! ATTTGTCTAAAATTTTGCAT+AGG - chr3_4:14648867-14648886 Msa0491730:five_prime_UTR 20.0%
! TAAAATACATTGGGATATGA+GGG + chr3_4:14639166-14639185 None:intergenic 25.0%
! ATAAAATACATTGGGATATG+AGG + chr3_4:14639167-14639186 None:intergenic 25.0%
! GTGGAAGAAATAAAATACAT+TGG + chr3_4:14639176-14639195 None:intergenic 25.0%
! GAGAAAGAGAAAGAATAATA+CGG + chr3_4:14639480-14639499 None:intergenic 25.0%
!!! TGATTCTGGTTTTTTATTTG+TGG - chr3_4:14639620-14639639 Msa0491730:three_prime_UTR 25.0%
!! TAGTTGGAAAATTTGATGAT+TGG - chr3_4:14639893-14639912 Msa0491730:intron 25.0%
!! TATAGTTAAGGAGCAATTTT+TGG - chr3_4:14640115-14640134 Msa0491730:intron 25.0%
!! ATAGTTAAGGAGCAATTTTT+GGG - chr3_4:14640116-14640135 Msa0491730:intron 25.0%
! TTATACTAAATAGCATATCG+TGG - chr3_4:14640547-14640566 Msa0491730:CDS 25.0%
! TTATAAGAGTTGTTAAATGG+CGG + chr3_4:14640620-14640639 None:intergenic 25.0%
!! TAATAAAAGAGCATACAAGA+TGG - chr3_4:14641094-14641113 Msa0491730:intron 25.0%
! TGACTACAAAACTTGATTTA+GGG + chr3_4:14641153-14641172 None:intergenic 25.0%
! ATGACTACAAAACTTGATTT+AGG + chr3_4:14641154-14641173 None:intergenic 25.0%
!!! TAAATCAAGTTTTGTAGTCA+TGG - chr3_4:14641153-14641172 Msa0491730:intron 25.0%
!! TGATTTTTCTCATCTTTCTT+TGG + chr3_4:14641220-14641239 None:intergenic 25.0%
!!! TCTTTTTTTTTTTTTTGGGG+GGG - chr3_4:14641265-14641284 Msa0491730:intron 25.0%
!! ATCAGTCCTTTTATAAAACA+TGG - chr3_4:14641384-14641403 Msa0491730:intron 25.0%
! TTATAAAACATGGACATAAG+CGG - chr3_4:14641394-14641413 Msa0491730:intron 25.0%
!!! CTATCCGTACTTTTTTTTTA+GGG + chr3_4:14641449-14641468 None:intergenic 25.0%
!!! TCTATCCGTACTTTTTTTTT+AGG + chr3_4:14641450-14641469 None:intergenic 25.0%
! ATAACAATGCTCAAAAATCA+TGG + chr3_4:14641501-14641520 None:intergenic 25.0%
!!! GCAGCTCTATTTTTTTTTTT+TGG - chr3_4:14641591-14641610 Msa0491730:CDS 25.0%
!!! CTCTATTTTTTTTTTTTGGG+AGG - chr3_4:14641595-14641614 Msa0491730:CDS 25.0%
!! AAATGTTTAAAGTTCATGCA+TGG - chr3_4:14641619-14641638 Msa0491730:CDS 25.0%
! TAACCAGTAGAGAAAAAATA+AGG - chr3_4:14641901-14641920 Msa0491730:intron 25.0%
! CAATTACAATTCATTATCTG+TGG + chr3_4:14641933-14641952 None:intergenic 25.0%
! GATAATGAATTGTAATTGAC+AGG - chr3_4:14641935-14641954 Msa0491730:intron 25.0%
! TTGACAGGAGAAAATATATA+AGG - chr3_4:14641950-14641969 Msa0491730:CDS 25.0%
! TGACAGGAGAAAATATATAA+GGG - chr3_4:14641951-14641970 Msa0491730:CDS 25.0%
! GGAAATTAATCATAGTTGAT+AGG - chr3_4:14641984-14642003 Msa0491730:CDS 25.0%
! TTCTATGAAAAGATTTACTC+AGG - chr3_4:14642046-14642065 Msa0491730:CDS 25.0%
! TCTATGAAAAGATTTACTCA+GGG - chr3_4:14642047-14642066 Msa0491730:CDS 25.0%
! GTGTATATTACAAACTCAAA+TGG + chr3_4:14642195-14642214 None:intergenic 25.0%
!! ATGTTGAAGGAAAATTTTAG+AGG - chr3_4:14642517-14642536 Msa0491730:intron 25.0%
!! TGTTGAAGGAAAATTTTAGA+GGG - chr3_4:14642518-14642537 Msa0491730:intron 25.0%
!!! GAAAAGTTGGTGTATTTATA+GGG - chr3_4:14642546-14642565 Msa0491730:intron 25.0%
! CCAAAGTACGAATAAAATAT+GGG + chr3_4:14642589-14642608 None:intergenic 25.0%
!! CCATATTTTATTCGTACTTT+GGG - chr3_4:14642587-14642606 Msa0491730:intron 25.0%
!! ATGTCTGTTACAAAGTATTA+TGG - chr3_4:14642822-14642841 Msa0491730:intron 25.0%
!! TGTCTGTTACAAAGTATTAT+GGG - chr3_4:14642823-14642842 Msa0491730:intron 25.0%
! TGTCAAACCTAGTAATAAAA+CGG - chr3_4:14642998-14643017 Msa0491730:intron 25.0%
!!! TCTATTTCCGTTTTATTACT+AGG + chr3_4:14643008-14643027 None:intergenic 25.0%
!!! TTCAGCTTGCTAATATAATA+TGG - chr3_4:14643167-14643186 Msa0491730:intron 25.0%
!!! TCAGCTTGCTAATATAATAT+GGG - chr3_4:14643168-14643187 Msa0491730:intron 25.0%
! GTGATAAAATTGCTAATTAC+TGG - chr3_4:14643512-14643531 Msa0491730:CDS 25.0%
!! ATTTTTCATATTATGACGGT+GGG + chr3_4:14643626-14643645 None:intergenic 25.0%
!! TATTTTTCATATTATGACGG+TGG + chr3_4:14643627-14643646 None:intergenic 25.0%
! CATTATGATCATAAAAGTCT+TGG - chr3_4:14643898-14643917 Msa0491730:intron 25.0%
! TTTCCTAGTTTAAGTAGTAA+AGG + chr3_4:14644162-14644181 None:intergenic 25.0%
! TTACTACTTAAACTAGGAAA+CGG - chr3_4:14644162-14644181 Msa0491730:intron 25.0%
!! AGAAATCTTTTCGTAGTTAA+GGG + chr3_4:14644603-14644622 None:intergenic 25.0%
! TAAACTAGATAGCATAAACT+AGG + chr3_4:14644904-14644923 None:intergenic 25.0%
!! AACCCAATAAGTTTATCTTT+TGG + chr3_4:14644952-14644971 None:intergenic 25.0%
!! TATTGGGTTATCTTAGATTT+TGG - chr3_4:14644963-14644982 Msa0491730:intron 25.0%
!! ATTGGGTTATCTTAGATTTT+GGG - chr3_4:14644964-14644983 Msa0491730:intron 25.0%
! TCTTATCTAGTTATCTTACA+AGG + chr3_4:14645013-14645032 None:intergenic 25.0%
!! ATACTTTATAAGCTCTTTTC+AGG - chr3_4:14645040-14645059 Msa0491730:intron 25.0%
!! TTTTCTCAATAGATTATGAG+TGG - chr3_4:14645282-14645301 Msa0491730:intron 25.0%
! TTGACACAATATTATGTCAA+GGG + chr3_4:14645481-14645500 None:intergenic 25.0%
! TAACAGAATAAATTCTTGGA+TGG + chr3_4:14645530-14645549 None:intergenic 25.0%
! AAAGTCAAAGATAAAACAAG+AGG - chr3_4:14645601-14645620 Msa0491730:intron 25.0%
! AAGTCAAAGATAAAACAAGA+GGG - chr3_4:14645602-14645621 Msa0491730:intron 25.0%
!! AAAGATTTGCAGGATTTTTA+TGG - chr3_4:14645626-14645645 Msa0491730:intron 25.0%
!!! AATTTTTCAATTTTCTCCTG+AGG + chr3_4:14645962-14645981 None:intergenic 25.0%
! AGGAGAAAATTGAAAAATTG+AGG - chr3_4:14645963-14645982 Msa0491730:intron 25.0%
! AGAAAATTGAAAAATTGAGG+CGG - chr3_4:14645966-14645985 Msa0491730:intron 25.0%
! TAGAATGACTTTGAATTTGT+GGG + chr3_4:14646090-14646109 None:intergenic 25.0%
!! GTACTAAGATCTTCAATTTT+AGG + chr3_4:14646127-14646146 None:intergenic 25.0%
! CAGTATGATTACTTTATCTA+TGG - chr3_4:14646608-14646627 Msa0491730:intron 25.0%
!!! TCTATGGTTGATAATTTCAA+AGG - chr3_4:14646624-14646643 Msa0491730:intron 25.0%
! GAAATATTATGAATCACTCT+TGG + chr3_4:14646678-14646697 None:intergenic 25.0%
!!! AACATATTGATTTTAGTACG+TGG - chr3_4:14646745-14646764 Msa0491730:intron 25.0%
! ACCAAAACAGTGTATATTAT+TGG - chr3_4:14646818-14646837 Msa0491730:intron 25.0%
!! TCCAATAATATACACTGTTT+TGG + chr3_4:14646822-14646841 None:intergenic 25.0%
! TTATTGGAATTAAACTGACT+AGG - chr3_4:14646834-14646853 Msa0491730:intron 25.0%
!!! TGAAAATGGGTTTTACTATA+GGG - chr3_4:14646875-14646894 Msa0491730:intron 25.0%
! ACTTACATTTACATCAGATT+CGG - chr3_4:14646999-14647018 Msa0491730:intron 25.0%
! TGTGATCATTTAAACAACAA+AGG + chr3_4:14647096-14647115 None:intergenic 25.0%
! GTTTATGACTTTATCTCTAA+TGG + chr3_4:14648108-14648127 None:intergenic 25.0%
! ATTGATATGAAGGCAAATAT+TGG + chr3_4:14648263-14648282 None:intergenic 25.0%
! TTTAGCCCTATTAATTTCAT+AGG + chr3_4:14648467-14648486 None:intergenic 25.0%
! CTTTAATCCATAAATAGTCT+AGG - chr3_4:14648496-14648515 Msa0491730:five_prime_UTR 25.0%
!!! ATTTTGATACCTAATGCAAA+GGG + chr3_4:14648713-14648732 None:intergenic 25.0%
!!! AATTTTGATACCTAATGCAA+AGG + chr3_4:14648714-14648733 None:intergenic 25.0%
! TTTGCATTAGGTATCAAAAT+TGG - chr3_4:14648713-14648732 Msa0491730:five_prime_UTR 25.0%
! AACATTTAGCCATTAAATCA+TGG - chr3_4:14648744-14648763 Msa0491730:five_prime_UTR 25.0%
AGAAAAAATGAAGGATCAAG+TGG + chr3_4:14639195-14639214 None:intergenic 30.0%
!! GGGGATTTTAGAAAAAATGA+AGG + chr3_4:14639204-14639223 None:intergenic 30.0%
TTATGCATTATTTGCGAGAT+TGG + chr3_4:14639240-14639259 None:intergenic 30.0%
TGCAAAATCGACAAAGAAAA+CGG + chr3_4:14639397-14639416 None:intergenic 30.0%
ACAAGATAAGTATCTGACAT+GGG - chr3_4:14640061-14640080 Msa0491730:intron 30.0%
TTCAAGCGATTATCAATCAT+TGG + chr3_4:14640242-14640261 None:intergenic 30.0%
TTGTTAGGATGAATAATACG+AGG - chr3_4:14640414-14640433 Msa0491730:CDS 30.0%
CACTATAGCATAGTGAAATT+CGG + chr3_4:14640589-14640608 None:intergenic 30.0%
! AAAAAAAAAAGGCGGCTTTT+AGG + chr3_4:14640651-14640670 None:intergenic 30.0%
GAAGGTCTTGAATTTGAATT+TGG - chr3_4:14640748-14640767 Msa0491730:intron 30.0%
CTTTCAAATAATTTCCTGAG+AGG + chr3_4:14640776-14640795 None:intergenic 30.0%
GTTTATATGGTGAAAAGAGA+CGG - chr3_4:14640896-14640915 Msa0491730:intron 30.0%
TTTATATGGTGAAAAGAGAC+GGG - chr3_4:14640897-14640916 Msa0491730:intron 30.0%
TTATCCAATAAGCAATATCG+TGG - chr3_4:14640939-14640958 Msa0491730:intron 30.0%
TATCCAATAAGCAATATCGT+GGG - chr3_4:14640940-14640959 Msa0491730:intron 30.0%
GGAGGTTATCATAATTGTTA+GGG - chr3_4:14641191-14641210 Msa0491730:intron 30.0%
!!! CTTTTTTTTTTTTTTGGGGG+GGG - chr3_4:14641266-14641285 Msa0491730:intron 30.0%
!!! TTTTTTTTTTTTTTGGGGGG+GGG - chr3_4:14641267-14641286 Msa0491730:intron 30.0%
AAATCATGGAATCAGATGTA+AGG + chr3_4:14641487-14641506 None:intergenic 30.0%
! CTTTTTCCCATCTTTGTATT+TGG + chr3_4:14641704-14641723 None:intergenic 30.0%
TCACTACATATTCCTTCAAT+TGG + chr3_4:14641816-14641835 None:intergenic 30.0%
GACAGGAGAAAATATATAAG+GGG - chr3_4:14641952-14641971 Msa0491730:CDS 30.0%
CAACTATGATTAATTTCCTG+AGG + chr3_4:14641982-14642001 None:intergenic 30.0%
! TTTGTTATATGTATGGCTGT+TGG - chr3_4:14642104-14642123 Msa0491730:CDS 30.0%
AGAACCCACAAACAATATAT+TGG + chr3_4:14642155-14642174 None:intergenic 30.0%
TTATAGGGACTAAATGTTGA+AGG - chr3_4:14642504-14642523 Msa0491730:intron 30.0%
!! CGAAAAGTTGGTGTATTTAT+AGG - chr3_4:14642545-14642564 Msa0491730:intron 30.0%
! CCCATATTTTATTCGTACTT+TGG - chr3_4:14642586-14642605 Msa0491730:intron 30.0%
CCCAAAGTACGAATAAAATA+TGG + chr3_4:14642590-14642609 None:intergenic 30.0%
!! ATGAAGACTCATTTTTGTGA+TGG - chr3_4:14642693-14642712 Msa0491730:intron 30.0%
TAGTAGAAAATCCTACTTCA+TGG + chr3_4:14642759-14642778 None:intergenic 30.0%
TCTCTAAACAAACATAGACA+AGG + chr3_4:14642863-14642882 None:intergenic 30.0%
CTATGTTTGTTTAGAGAGTT+TGG - chr3_4:14642866-14642885 Msa0491730:intron 30.0%
TGAGAAGGAAAAGACATTAT+GGG + chr3_4:14642973-14642992 None:intergenic 30.0%
TGCTAATATAATATGGGATG+AGG - chr3_4:14643174-14643193 Msa0491730:intron 30.0%
GCTAATATAATATGGGATGA+GGG - chr3_4:14643175-14643194 Msa0491730:intron 30.0%
AAACAAGAAAGAAGTGAATC+AGG - chr3_4:14643252-14643271 Msa0491730:intron 30.0%
AGTTCGAACCTTAACAATAA+TGG - chr3_4:14643349-14643368 Msa0491730:CDS 30.0%
ACTGAACTTTCTAAATATCG+AGG - chr3_4:14643460-14643479 Msa0491730:CDS 30.0%
! TTTTATCAAAATGCCGATGA+AGG - chr3_4:14643738-14643757 Msa0491730:intron 30.0%
!! TGATTTTGCTGATTATGACT+GGG - chr3_4:14643773-14643792 Msa0491730:intron 30.0%
TGAATTTCCGAAGTCTAAAA+TGG - chr3_4:14643944-14643963 Msa0491730:intron 30.0%
AAGTGATGAATACAACAGTT+AGG + chr3_4:14643985-14644004 None:intergenic 30.0%
TGAAGGAACTTAAACTAAGA+TGG + chr3_4:14644031-14644050 None:intergenic 30.0%
AGACCTTTACTACTTAAACT+AGG - chr3_4:14644156-14644175 Msa0491730:intron 30.0%
TACTACTTAAACTAGGAAAC+GGG - chr3_4:14644163-14644182 Msa0491730:intron 30.0%
!! TAAAAGTTGATGATTGTCAG+TGG - chr3_4:14644205-14644224 Msa0491730:intron 30.0%
!! AAAAGTTGATGATTGTCAGT+GGG - chr3_4:14644206-14644225 Msa0491730:intron 30.0%
CACATATAATGAAAGTCAAG+GGG + chr3_4:14644243-14644262 None:intergenic 30.0%
GCACATATAATGAAAGTCAA+GGG + chr3_4:14644244-14644263 None:intergenic 30.0%
CAATTGTTTACTCTTTACTC+CGG + chr3_4:14644305-14644324 None:intergenic 30.0%
! TTAGTCTTTGTCTCTTACAA+CGG - chr3_4:14644347-14644366 Msa0491730:intron 30.0%
!! ATGCTTTAAGGAATAGATCA+GGG - chr3_4:14644528-14644547 Msa0491730:intron 30.0%
! TGTTCTTCTTTGATTTCCAA+AGG + chr3_4:14644554-14644573 None:intergenic 30.0%
! CAGAAATCTTTTCGTAGTTA+AGG + chr3_4:14644604-14644623 None:intergenic 30.0%
CTTAACTACGAAAAGATTTC+TGG - chr3_4:14644602-14644621 Msa0491730:intron 30.0%
TAGAGAACTGAATAATAGAC+AGG + chr3_4:14644745-14644764 None:intergenic 30.0%
TCAGTTCTCTATTTGTATAG+TGG - chr3_4:14644754-14644773 Msa0491730:CDS 30.0%
ATCTGAATCATACAGTCTAA+AGG + chr3_4:14644804-14644823 None:intergenic 30.0%
CTGTATGATTCAGATATGTT+AGG - chr3_4:14644809-14644828 Msa0491730:CDS 30.0%
TTGTATGATCCAGATATGTT+AGG - chr3_4:14644835-14644854 Msa0491730:CDS 30.0%
AACTAGGAAGCAATTATAGA+AGG + chr3_4:14644888-14644907 None:intergenic 30.0%
TATCTAGTTATCTTACAAGG+CGG + chr3_4:14645010-14645029 None:intergenic 30.0%
! TCACACATTGACTATAAAGA+AGG + chr3_4:14645253-14645272 None:intergenic 30.0%
AATTGCATTTCAGCATCTTA+TGG - chr3_4:14645372-14645391 Msa0491730:intron 30.0%
CTTGACACAATATTATGTCA+AGG + chr3_4:14645482-14645501 None:intergenic 30.0%
CTTGACATAATATTGTGTCA+AGG - chr3_4:14645480-14645499 Msa0491730:intron 30.0%
!! AAAAGTACCAGTTGAAAACA+CGG - chr3_4:14645576-14645595 Msa0491730:intron 30.0%
AGTCAAAGATAAAACAAGAG+GGG - chr3_4:14645603-14645622 Msa0491730:intron 30.0%
! TGCAGGATTTTTATGGTAAT+TGG - chr3_4:14645633-14645652 Msa0491730:intron 30.0%
ATGATGTTCTGATATGTTTC+AGG + chr3_4:14645764-14645783 None:intergenic 30.0%
GAACATCATAAATCCATATG+TGG - chr3_4:14645775-14645794 Msa0491730:intron 30.0%
! TAACTTTTCAAAGGACTCAA+CGG + chr3_4:14645908-14645927 None:intergenic 30.0%
CTAGAATGACTTTGAATTTG+TGG + chr3_4:14646091-14646110 None:intergenic 30.0%
ATTCAAAGTCATTCTAGTGA+TGG - chr3_4:14646094-14646113 Msa0491730:intron 30.0%
TTCAAAGTCATTCTAGTGAT+GGG - chr3_4:14646095-14646114 Msa0491730:intron 30.0%
GAATCATCTTGTTCAATTAG+AGG + chr3_4:14646154-14646173 None:intergenic 30.0%
TGTTTCCTTGCATACTAATT+TGG - chr3_4:14646298-14646317 Msa0491730:intron 30.0%
GTTTCCTTGCATACTAATTT+GGG - chr3_4:14646299-14646318 Msa0491730:intron 30.0%
ACTGTAAAAAAAGTTTGCCT+CGG + chr3_4:14646338-14646357 None:intergenic 30.0%
! AGTAGGTAGTATTTTACTGT+AGG + chr3_4:14646527-14646546 None:intergenic 30.0%
AATATGTTCCATGTATTACC+AGG + chr3_4:14646733-14646752 None:intergenic 30.0%
!! TGATTTTAGTACGTGGAATA+AGG - chr3_4:14646752-14646771 Msa0491730:intron 30.0%
! TAAACTGACTAGGTTTTCAT+AGG - chr3_4:14646844-14646863 Msa0491730:intron 30.0%
! AAACTGACTAGGTTTTCATA+GGG - chr3_4:14646845-14646864 Msa0491730:intron 30.0%
ATAGGGACTAAACTGAAAAT+GGG - chr3_4:14646862-14646881 Msa0491730:intron 30.0%
!! CTGAAAATGGGTTTTACTAT+AGG - chr3_4:14646874-14646893 Msa0491730:intron 30.0%
!! GAAAATGGGTTTTACTATAG+GGG - chr3_4:14646876-14646895 Msa0491730:intron 30.0%
GAATCTGATGTAAATGTAAG+TGG + chr3_4:14647000-14647019 None:intergenic 30.0%
! TCACATTTTGTGACTAAAGT+AGG - chr3_4:14647111-14647130 Msa0491730:intron 30.0%
! TCCTAGTTATCTTATTTGAG+AGG - chr3_4:14647143-14647162 Msa0491730:intron 30.0%
TCCTCTCAAATAAGATAACT+AGG + chr3_4:14647147-14647166 None:intergenic 30.0%
! AACACACTTAACAGTTTTAC+TGG + chr3_4:14647181-14647200 None:intergenic 30.0%
AGGAAATTATTCTGACAAAC+TGG - chr3_4:14647396-14647415 Msa0491730:intron 30.0%
AATCAACAACTTTCTCACAT+TGG - chr3_4:14647514-14647533 Msa0491730:intron 30.0%
ATCAACAACTTTCTCACATT+GGG - chr3_4:14647515-14647534 Msa0491730:intron 30.0%
!! TTATTTTATTGTCAGCCTTC+TGG - chr3_4:14647766-14647785 Msa0491730:intron 30.0%
! TGCTTAATTTGACATATGAG+TGG + chr3_4:14647980-14647999 None:intergenic 30.0%
!! ATGACACAAACTTTAAAGCA+TGG + chr3_4:14648025-14648044 None:intergenic 30.0%
GTCATGTGACTTTCTTTAAA+TGG + chr3_4:14648227-14648246 None:intergenic 30.0%
AATGCAATCAATGTGAAATG+AGG + chr3_4:14648343-14648362 None:intergenic 30.0%
! TTGCATTTCAAGTCAATACT+TGG - chr3_4:14648356-14648375 Msa0491730:CDS 30.0%
CTATTAATTTCATAGGCTGT+GGG + chr3_4:14648460-14648479 None:intergenic 30.0%
CACAGCCTATGAAATTAATA+GGG - chr3_4:14648459-14648478 Msa0491730:five_prime_UTR 30.0%
CCATAATCCTAGACTATTTA+TGG + chr3_4:14648506-14648525 None:intergenic 30.0%
! CCATAAATAGTCTAGGATTA+TGG - chr3_4:14648503-14648522 Msa0491730:five_prime_UTR 30.0%
ATGTAAGTAAACTGTGAACA+TGG - chr3_4:14648652-14648671 Msa0491730:five_prime_UTR 30.0%
GAAGGATAACCATGATTTAA+TGG + chr3_4:14648756-14648775 None:intergenic 30.0%
TGAATGTAACCATTGAATCT+TGG - chr3_4:14648827-14648846 Msa0491730:five_prime_UTR 30.0%
AACATGATACCAAGATTCAA+TGG + chr3_4:14648839-14648858 None:intergenic 30.0%
ATCGACAAAGAAAACGGTAA+CGG + chr3_4:14639391-14639410 None:intergenic 35.0%
! GTAGCGTGTTTATCTGTTTT+TGG - chr3_4:14639833-14639852 Msa0491730:intron 35.0%
!! TTGAAGTGTTGTTGTGTAGT+TGG - chr3_4:14639877-14639896 Msa0491730:intron 35.0%
GACAAGATAAGTATCTGACA+TGG - chr3_4:14640060-14640079 Msa0491730:intron 35.0%
CAAGATAAGTATCTGACATG+GGG - chr3_4:14640062-14640081 Msa0491730:intron 35.0%
TATACAGCTCAGATACTCTT+CGG + chr3_4:14640099-14640118 None:intergenic 35.0%
GTATCTGAGCTGTATAGTTA+AGG - chr3_4:14640103-14640122 Msa0491730:intron 35.0%
GATTATCAATCATTGGTCCA+CGG + chr3_4:14640235-14640254 None:intergenic 35.0%
ATCGCTTGAAACTTTGATGT+CGG - chr3_4:14640252-14640271 Msa0491730:intron 35.0%
ATCATCACTTCAGTACATAG+TGG - chr3_4:14640280-14640299 Msa0491730:intron 35.0%
ATCCTAACAACCAAATGAGA+CGG + chr3_4:14640404-14640423 None:intergenic 35.0%
CTTTCGAATGTTGTCAATCA+CGG - chr3_4:14640456-14640475 Msa0491730:CDS 35.0%
TGATAAAATCTGCGACACAA+TGG - chr3_4:14640498-14640517 Msa0491730:CDS 35.0%
!! ATGGTGCTATAGCAACTATT+TGG - chr3_4:14640517-14640536 Msa0491730:CDS 35.0%
CGAATTTCACTATGCTATAG+TGG - chr3_4:14640587-14640606 Msa0491730:CDS 35.0%
ACGAAGTACAGAAAGTCAAA+GGG - chr3_4:14640714-14640733 Msa0491730:CDS 35.0%
CAAAGGGGAAATAATTGAGA+AGG - chr3_4:14640730-14640749 Msa0491730:intron 35.0%
! ATTTGAATTTGGTTCCTCTC+AGG - chr3_4:14640759-14640778 Msa0491730:intron 35.0%
CTGAACTATCACAAACAGAA+TGG + chr3_4:14640845-14640864 None:intergenic 35.0%
TTATATGGTGAAAAGAGACG+GGG - chr3_4:14640898-14640917 Msa0491730:intron 35.0%
CAGACAGTAGGTTAAGAATA+GGG - chr3_4:14640993-14641012 Msa0491730:intron 35.0%
TTTGTAGTCATGGAGTGTAA+TGG - chr3_4:14641163-14641182 Msa0491730:intron 35.0%
CGGAGGTTATCATAATTGTT+AGG - chr3_4:14641190-14641209 Msa0491730:intron 35.0%
!!! TTTTTTTTTTTTTGGGGGGG+GGG - chr3_4:14641268-14641287 Msa0491730:intron 35.0%
TTCAACTGACAAGAAAATGC+TGG + chr3_4:14641562-14641581 None:intergenic 35.0%
AAGTAGAGGATTACTGGATT+AGG - chr3_4:14641769-14641788 Msa0491730:intron 35.0%
GGAATATGTAGTGAGTAAAC+AGG - chr3_4:14641822-14641841 Msa0491730:CDS 35.0%
!!! GGTCCTTATTTTTTCTCTAC+TGG + chr3_4:14641907-14641926 None:intergenic 35.0%
ACAATTCATTATCTGTGGGA+TGG + chr3_4:14641928-14641947 None:intergenic 35.0%
GCATATAAGGTAATATGAGC+TGG + chr3_4:14642078-14642097 None:intergenic 35.0%
CGCGATGATATGTACATAAA+AGG + chr3_4:14642332-14642351 None:intergenic 35.0%
!! CTTTGGGATTATCACTTCAT+AGG - chr3_4:14642603-14642622 Msa0491730:intron 35.0%
GGATTATCACTTCATAGGAT+TGG - chr3_4:14642608-14642627 Msa0491730:intron 35.0%
!!! CTCATTTTTGTGATGGACTT+TGG - chr3_4:14642700-14642719 Msa0491730:intron 35.0%
! TAGAGAGTTTGGACTTTTGA+AGG - chr3_4:14642877-14642896 Msa0491730:intron 35.0%
!! AGTTTGGACTTTTGAAGGAA+AGG - chr3_4:14642882-14642901 Msa0491730:intron 35.0%
TACACCTAACATGACAGTAA+GGG + chr3_4:14642911-14642930 None:intergenic 35.0%
ATACACCTAACATGACAGTA+AGG + chr3_4:14642912-14642931 None:intergenic 35.0%
CTGAGAAGGAAAAGACATTA+TGG + chr3_4:14642974-14642993 None:intergenic 35.0%
AGGTTTGACATATACTGAGA+AGG + chr3_4:14642988-14643007 None:intergenic 35.0%
AGGGAAATACATGAAGAATG+AGG + chr3_4:14643048-14643067 None:intergenic 35.0%
CTGATAGTAGCAACATAAGT+AGG + chr3_4:14643082-14643101 None:intergenic 35.0%
AATATAATATGGGATGAGGG+AGG - chr3_4:14643178-14643197 Msa0491730:intron 35.0%
TTATTAAGCTTACACACAGC+TGG + chr3_4:14643280-14643299 None:intergenic 35.0%
CTGTGTGTAAGCTTAATAAG+CGG - chr3_4:14643281-14643300 Msa0491730:intron 35.0%
ATCAAAATCAGCTTTCGTCT+CGG + chr3_4:14643314-14643333 None:intergenic 35.0%
!! GCTGATTTTGATGGAAAACT+AGG - chr3_4:14643322-14643341 Msa0491730:intron 35.0%
TCGAACCTTAACAATAATGG+AGG - chr3_4:14643352-14643371 Msa0491730:CDS 35.0%
GTTGTCCTCCATTATTGTTA+AGG + chr3_4:14643360-14643379 None:intergenic 35.0%
TCTAAATATCGAGGTGAACT+TGG - chr3_4:14643469-14643488 Msa0491730:CDS 35.0%
!! GTGATTTTGCTGATTATGAC+TGG - chr3_4:14643772-14643791 Msa0491730:intron 35.0%
!! GAAGTTTTGATGACCTTGAT+CGG - chr3_4:14643805-14643824 Msa0491730:intron 35.0%
TTTACCTGAAAATCCGATCA+AGG + chr3_4:14643821-14643840 None:intergenic 35.0%
CAAGCATATGTCTGATAACA+TGG - chr3_4:14643872-14643891 Msa0491730:intron 35.0%
! GTTTGGTCCATTTTAGACTT+CGG + chr3_4:14643954-14643973 None:intergenic 35.0%
GATGAATACAACAGTTAGGA+CGG + chr3_4:14643981-14644000 None:intergenic 35.0%
CTTTATTGTTGCAGCTACAA+CGG + chr3_4:14644087-14644106 None:intergenic 35.0%
ACTACTTAAACTAGGAAACG+GGG - chr3_4:14644164-14644183 Msa0491730:intron 35.0%
TATAATGAAAGTCAAGGGGA+AGG + chr3_4:14644239-14644258 None:intergenic 35.0%
GGCACATATAATGAAAGTCA+AGG + chr3_4:14644245-14644264 None:intergenic 35.0%
TTCATTATATGTGCCCATGA+TGG - chr3_4:14644250-14644269 Msa0491730:CDS 35.0%
TCATTATATGTGCCCATGAT+GGG - chr3_4:14644251-14644270 Msa0491730:CDS 35.0%
TTTCCAATGTTACCCATCAT+GGG + chr3_4:14644266-14644285 None:intergenic 35.0%
ATTTCCAATGTTACCCATCA+TGG + chr3_4:14644267-14644286 None:intergenic 35.0%
AGCAATGATGACCCTATATT+TGG - chr3_4:14644410-14644429 Msa0491730:intron 35.0%
CAGAATTATCAAGACTTGCA+TGG + chr3_4:14644436-14644455 None:intergenic 35.0%
! TTGATAATTCTGATGACCTC+TGG - chr3_4:14644444-14644463 Msa0491730:intron 35.0%
! CTATTCCTTAAAGCATCAGT+GGG + chr3_4:14644524-14644543 None:intergenic 35.0%
! TCTATTCCTTAAAGCATCAG+TGG + chr3_4:14644525-14644544 None:intergenic 35.0%
!! GATGCTTTAAGGAATAGATC+AGG - chr3_4:14644527-14644546 Msa0491730:intron 35.0%
! TTTTCTATACTCTGACAAGC+AGG + chr3_4:14644629-14644648 None:intergenic 35.0%
AGAACTGAATAATAGACAGG+TGG + chr3_4:14644742-14644761 None:intergenic 35.0%
! CATTGACTATAAAGAAGGCT+TGG + chr3_4:14645248-14645267 None:intergenic 35.0%
ATTCTTACTCTTGCATGAGA+GGG + chr3_4:14645324-14645343 None:intergenic 35.0%
AATTCTTACTCTTGCATGAG+AGG + chr3_4:14645325-14645344 None:intergenic 35.0%
GATGCTGAAATGCAATTAGA+AGG + chr3_4:14645369-14645388 None:intergenic 35.0%
! GTGTTTTCAACTGGTACTTT+TGG + chr3_4:14645577-14645596 None:intergenic 35.0%
!! ACTTTTTCCGTGTTTTCAAC+TGG + chr3_4:14645586-14645605 None:intergenic 35.0%
AGTTTCAGTCAGGAAATCTT+AGG - chr3_4:14645843-14645862 Msa0491730:intron 35.0%
! GAGTCCTTTGAAAAGTTATG+CGG - chr3_4:14645910-14645929 Msa0491730:intron 35.0%
! AGTCCTTTGAAAAGTTATGC+GGG - chr3_4:14645911-14645930 Msa0491730:intron 35.0%
AAATTGAAAAATTGAGGCGG+CGG - chr3_4:14645969-14645988 Msa0491730:intron 35.0%
AATGACTTTGAATTTGTGGG+TGG + chr3_4:14646087-14646106 None:intergenic 35.0%
TTGAAGAAACCATATTGTGC+AGG - chr3_4:14646209-14646228 Msa0491730:intron 35.0%
GCTTCAGGATGTTATATCAA+AGG - chr3_4:14646231-14646250 Msa0491730:intron 35.0%
CTGTAAAAAAAGTTTGCCTC+GGG + chr3_4:14646337-14646356 None:intergenic 35.0%
GCTTTCTTCTCTTGCAAAAA+CGG + chr3_4:14646481-14646500 None:intergenic 35.0%
! GTAGGTTTTCTAACCTGTTT+TGG + chr3_4:14646509-14646528 None:intergenic 35.0%
GTCACAGTAATTGAAGTAGT+AGG + chr3_4:14646544-14646563 None:intergenic 35.0%
TGCTCATATTGAATCAATCC+TGG - chr3_4:14646712-14646731 Msa0491730:intron 35.0%
GAATCAATCCTGGTAATACA+TGG - chr3_4:14646722-14646741 Msa0491730:intron 35.0%
GGACTAAAGTCAAAACAACA+AGG - chr3_4:14646773-14646792 Msa0491730:intron 35.0%
AACAAGGATCAAAGTACGTT+TGG - chr3_4:14646789-14646808 Msa0491730:intron 35.0%
ACAAGGATCAAAGTACGTTT+GGG - chr3_4:14646790-14646809 Msa0491730:intron 35.0%
CATAGGGACTAAACTGAAAA+TGG - chr3_4:14646861-14646880 Msa0491730:intron 35.0%
TAGATGATTTACCGTTAGCT+AGG - chr3_4:14647029-14647048 Msa0491730:intron 35.0%
AGTTTACTTAGCCTAGCTAA+CGG + chr3_4:14647043-14647062 None:intergenic 35.0%
TTGTGACTAAAGTAGGACTT+CGG - chr3_4:14647118-14647137 Msa0491730:intron 35.0%
GTACGGGAAAACTAGTTATT+AGG + chr3_4:14647264-14647283 None:intergenic 35.0%
AGGTCTATGAAAGAGTAAAC+GGG + chr3_4:14647365-14647384 None:intergenic 35.0%
CAGGTCTATGAAAGAGTAAA+CGG + chr3_4:14647366-14647385 None:intergenic 35.0%
TTTACTCTTTCATAGACCTG+TGG - chr3_4:14647366-14647385 Msa0491730:intron 35.0%
TAATTTCCTGTTAACTCCAC+AGG + chr3_4:14647385-14647404 None:intergenic 35.0%
GAACATCTTTCTTCATTGAG+AGG + chr3_4:14647647-14647666 None:intergenic 35.0%
ATAACATGCAAGCATGAAAC+TGG + chr3_4:14647832-14647851 None:intergenic 35.0%
TGTCTATCTGACCATACTTA+AGG - chr3_4:14647901-14647920 Msa0491730:intron 35.0%
! TTTAAAGCATGGTCTAAGTC+AGG + chr3_4:14648014-14648033 None:intergenic 35.0%
AAGAAAGTCACATGACTCTT+TGG - chr3_4:14648231-14648250 Msa0491730:intron 35.0%
! GTCAATACTTGGCATGATTT+TGG - chr3_4:14648367-14648386 Msa0491730:exon 35.0%
! AATACTTGGCATGATTTTGG+AGG - chr3_4:14648370-14648389 Msa0491730:exon 35.0%
!! ATGATTTTGGAGGTACATTG+AGG - chr3_4:14648380-14648399 Msa0491730:five_prime_UTR 35.0%
!! TGATTTTGGAGGTACATTGA+GGG - chr3_4:14648381-14648400 Msa0491730:five_prime_UTR 35.0%
CCTATTAATTTCATAGGCTG+TGG + chr3_4:14648461-14648480 None:intergenic 35.0%
CCACAGCCTATGAAATTAAT+AGG - chr3_4:14648458-14648477 Msa0491730:five_prime_UTR 35.0%
TCAACTATTGACAGTCTTCA+AGG + chr3_4:14648558-14648577 None:intergenic 35.0%
TGAAGACTGTCAATAGTTGA+TGG - chr3_4:14648558-14648577 Msa0491730:five_prime_UTR 35.0%
TAAACTGTGAACATGGATGA+CGG - chr3_4:14648659-14648678 Msa0491730:five_prime_UTR 35.0%
ACATTGGGATATGAGGGTTT+GGG + chr3_4:14639160-14639179 None:intergenic 40.0%
TACATTGGGATATGAGGGTT+TGG + chr3_4:14639161-14639180 None:intergenic 40.0%
CATTATTTGCGAGATTGGAG+GGG + chr3_4:14639235-14639254 None:intergenic 40.0%
GCATTATTTGCGAGATTGGA+GGG + chr3_4:14639236-14639255 None:intergenic 40.0%
TGCATTATTTGCGAGATTGG+AGG + chr3_4:14639237-14639256 None:intergenic 40.0%
!!! AACGACGCTGTTTTGTTTCA+TGG - chr3_4:14639532-14639551 Msa0491730:three_prime_UTR 40.0%
AGAATTAGCTCAATCATCGC+CGG + chr3_4:14639588-14639607 None:intergenic 40.0%
CTACGTCTACAGTTTGATTC+TGG - chr3_4:14639606-14639625 Msa0491730:three_prime_UTR 40.0%
!! GTTAAGGAGCAATTTTTGGG+AGG - chr3_4:14640119-14640138 Msa0491730:intron 40.0%
!!! AGTTTTGAGGTGATTGCTAG+TGG - chr3_4:14640189-14640208 Msa0491730:intron 40.0%
!!! GTTTTGAGGTGATTGCTAGT+GGG - chr3_4:14640190-14640209 Msa0491730:intron 40.0%
TGAATCGACACTAATCACTC+AGG + chr3_4:14640306-14640325 None:intergenic 40.0%
AAATGAGACGGTAACCTAGT+CGG + chr3_4:14640392-14640411 None:intergenic 40.0%
TACCGTCTCATTTGGTTGTT+AGG - chr3_4:14640399-14640418 Msa0491730:CDS 40.0%
ATGTTGTCAATCACGGATAG+CGG - chr3_4:14640463-14640482 Msa0491730:CDS 40.0%
!! TCACGGATAGCGGAAAATAT+AGG - chr3_4:14640473-14640492 Msa0491730:CDS 40.0%
AGCATATCGTGGATCTATAG+CGG - chr3_4:14640558-14640577 Msa0491730:CDS 40.0%
GACGAAGTACAGAAAGTCAA+AGG - chr3_4:14640713-14640732 Msa0491730:CDS 40.0%
CGAAGTACAGAAAGTCAAAG+GGG - chr3_4:14640715-14640734 Msa0491730:CDS 40.0%
GTTCCCACGATATTGCTTAT+TGG + chr3_4:14640946-14640965 None:intergenic 40.0%
CTGGCGCAATAGTAAGATAT+AGG + chr3_4:14640976-14640995 None:intergenic 40.0%
CCTATTCTTAACCTACTGTC+TGG + chr3_4:14640995-14641014 None:intergenic 40.0%
CCAGACAGTAGGTTAAGAAT+AGG - chr3_4:14640992-14641011 Msa0491730:intron 40.0%
!! TGTGAGCTTTGTTTCTGATG+TGG - chr3_4:14641065-14641084 Msa0491730:intron 40.0%
!! GTGAGCTTTGTTTCTGATGT+GGG - chr3_4:14641066-14641085 Msa0491730:intron 40.0%
!! CTTTGTTTCTGATGTGGGAA+TGG - chr3_4:14641071-14641090 Msa0491730:intron 40.0%
! TCATGGAGTGTAATGGAGAT+CGG - chr3_4:14641170-14641189 Msa0491730:intron 40.0%
!!! TTTTTTTTTTTTGGGGGGGG+GGG - chr3_4:14641269-14641288 Msa0491730:intron 40.0%
CCTACTTTCTCACTTCTGAT+AGG + chr3_4:14641678-14641697 None:intergenic 40.0%
CCTATCAGAAGTGAGAAAGT+AGG - chr3_4:14641675-14641694 Msa0491730:intron 40.0%
ATCAGAAGTGAGAAAGTAGG+AGG - chr3_4:14641678-14641697 Msa0491730:intron 40.0%
TAGGAGGCCAAATACAAAGA+TGG - chr3_4:14641694-14641713 Msa0491730:intron 40.0%
AGGAGGCCAAATACAAAGAT+GGG - chr3_4:14641695-14641714 Msa0491730:intron 40.0%
TGTTACTAGCAGCCAATTGA+AGG - chr3_4:14641801-14641820 Msa0491730:CDS 40.0%
ATATATAAGGGGTCATCCTC+AGG - chr3_4:14641963-14641982 Msa0491730:CDS 40.0%
! TCGCGTTAGCCTGTAATTAT+TGG - chr3_4:14642347-14642366 Msa0491730:CDS 40.0%
TTAGAGGGACTACGAAAAGT+TGG - chr3_4:14642533-14642552 Msa0491730:intron 40.0%
GATTCTGGGTTCTTCTTCTT+TGG + chr3_4:14642659-14642678 None:intergenic 40.0%
GCAATCTTTCTCCATGAAGT+AGG - chr3_4:14642745-14642764 Msa0491730:intron 40.0%
TAAGTAGGCACAAGGAAGAA+GGG + chr3_4:14643067-14643086 None:intergenic 40.0%
ATAAGTAGGCACAAGGAAGA+AGG + chr3_4:14643068-14643087 None:intergenic 40.0%
TAGCAACATAAGTAGGCACA+AGG + chr3_4:14643075-14643094 None:intergenic 40.0%
TTAAGATCTTCACTTGCCTC+TGG + chr3_4:14643232-14643251 None:intergenic 40.0%
TCAAAATCAGCTTTCGTCTC+GGG + chr3_4:14643313-14643332 None:intergenic 40.0%
!! GAGACGAAAGCTGATTTTGA+TGG - chr3_4:14643313-14643332 Msa0491730:intron 40.0%
!!! CTGATCAATTTTAGCTGCAC+TGG + chr3_4:14643428-14643447 None:intergenic 40.0%
CAGTGCAGCTAAAATTGATC+AGG - chr3_4:14643426-14643445 Msa0491730:CDS 40.0%
CTGCACAAACAAAAACGCAT+AGG + chr3_4:14643569-14643588 None:intergenic 40.0%
!! CTATGCGTTTTTGTTTGTGC+AGG - chr3_4:14643567-14643586 Msa0491730:CDS 40.0%
ACCCTGTTCTTTACCTTCAT+CGG + chr3_4:14643754-14643773 None:intergenic 40.0%
GATTATGACTGGGCTAACAT+AGG - chr3_4:14643783-14643802 Msa0491730:intron 40.0%
! ATGACCTTGATCGGATTTTC+AGG - chr3_4:14643814-14643833 Msa0491730:intron 40.0%
! TAGCTGCACATAGGTTTTAC+AGG + chr3_4:14644062-14644081 None:intergenic 40.0%
GACTTGCATGGCCAAATATA+GGG + chr3_4:14644424-14644443 None:intergenic 40.0%
AGACTTGCATGGCCAAATAT+AGG + chr3_4:14644425-14644444 None:intergenic 40.0%
AGCACATTCCACATTATCAG+CGG + chr3_4:14644663-14644682 None:intergenic 40.0%
GGAGATAGAAGTAAGCCTAT+TGG - chr3_4:14644683-14644702 Msa0491730:CDS 40.0%
AGACAGGTTCCTAACATATC+TGG + chr3_4:14644847-14644866 None:intergenic 40.0%
GCAAAGTGAGCAAAATAGAC+AGG + chr3_4:14644863-14644882 None:intergenic 40.0%
!! ATCTTACAAGGCGGTTTTGT+GGG + chr3_4:14645001-14645020 None:intergenic 40.0%
! TATCTTACAAGGCGGTTTTG+TGG + chr3_4:14645002-14645021 None:intergenic 40.0%
! CAATAGTGTTGGACATGAAC+GGG + chr3_4:14645111-14645130 None:intergenic 40.0%
! CCAATAGTGTTGGACATGAA+CGG + chr3_4:14645112-14645131 None:intergenic 40.0%
ATGTCCAACACTATTGGTGA+GGG - chr3_4:14645115-14645134 Msa0491730:intron 40.0%
TCAAACAGATTGCACACAGA+AGG + chr3_4:14645423-14645442 None:intergenic 40.0%
!! ATTCTTGGATGGCTTTGAGA+AGG + chr3_4:14645519-14645538 None:intergenic 40.0%
! TTGGTCTTCTTCAGCAACAT+CGG - chr3_4:14645652-14645671 Msa0491730:intron 40.0%
GGAGATGATTGTAACACAGA+AGG + chr3_4:14645704-14645723 None:intergenic 40.0%
TCATCTCCCTCTTCAATTCT+TGG - chr3_4:14645716-14645735 Msa0491730:intron 40.0%
CATCTCCCTCTTCAATTCTT+GGG - chr3_4:14645717-14645736 Msa0491730:intron 40.0%
! TCTGATATGTTTCAGGTCCT+AGG + chr3_4:14645757-14645776 None:intergenic 40.0%
!! TAAAACGAAGGTGCCACATA+TGG + chr3_4:14645791-14645810 None:intergenic 40.0%
! TATGTGGCACCTTCGTTTTA+TGG - chr3_4:14645791-14645810 Msa0491730:intron 40.0%
GACTGAAACTGTGTTAGCAT+TGG + chr3_4:14645833-14645852 None:intergenic 40.0%
ATGCTAACACAGTTTCAGTC+AGG - chr3_4:14645833-14645852 Msa0491730:intron 40.0%
TCAGAAACAACAGCAAGTAC+TGG - chr3_4:14646018-14646037 Msa0491730:intron 40.0%
CAGAAACAACAGCAAGTACT+GGG - chr3_4:14646019-14646038 Msa0491730:intron 40.0%
GTTTACTAGTGCAAGGAACT+TGG + chr3_4:14646048-14646067 None:intergenic 40.0%
CTTGCATACTAATTTGGGCA+CGG - chr3_4:14646304-14646323 Msa0491730:intron 40.0%
AAGAAAGCAGTAGCCAAAAC+AGG - chr3_4:14646493-14646512 Msa0491730:intron 40.0%
AGCTAGGCTAAGTAAACTGT+TGG - chr3_4:14647045-14647064 Msa0491730:intron 40.0%
! GGCTAAGTAAACTGTTGGTT+CGG - chr3_4:14647050-14647069 Msa0491730:intron 40.0%
!! GCTAAGTAAACTGTTGGTTC+GGG - chr3_4:14647051-14647070 Msa0491730:intron 40.0%
ATATCTGTGTGATACCAGCA+TGG + chr3_4:14647290-14647309 None:intergenic 40.0%
TTCGTCTCTGTTTCAACATC+AGG + chr3_4:14647322-14647341 None:intergenic 40.0%
! GAATCCTTGTCCATCTTTTG+AGG - chr3_4:14647543-14647562 Msa0491730:intron 40.0%
! ATAGGTTGGACCTCAAAAGA+TGG + chr3_4:14647556-14647575 None:intergenic 40.0%
!!! ATCTTTTGAGGTCCAACCTA+TGG - chr3_4:14647555-14647574 Msa0491730:intron 40.0%
TCTTAGTCTGATCCATAGGT+TGG + chr3_4:14647570-14647589 None:intergenic 40.0%
CTGTTCTTAGTCTGATCCAT+AGG + chr3_4:14647574-14647593 None:intergenic 40.0%
ACTAAGAACAGTCTCAGCAT+AGG - chr3_4:14647583-14647602 Msa0491730:intron 40.0%
AGAAAATGCATCTAACCCAC+CGG - chr3_4:14647612-14647631 Msa0491730:intron 40.0%
CAATGAGCATGGAAGGAATA+AGG + chr3_4:14647694-14647713 None:intergenic 40.0%
TCTACATGGATACTTGAGCT+TGG + chr3_4:14647799-14647818 None:intergenic 40.0%
TCTTATAGGGGGAGTTTACT+CGG - chr3_4:14648310-14648329 Msa0491730:intron 40.0%
TTAATTTCATAGGCTGTGGG+CGG + chr3_4:14648457-14648476 None:intergenic 40.0%
AAACTGTGAACATGGATGAC+GGG - chr3_4:14648660-14648679 Msa0491730:five_prime_UTR 40.0%
ATTGGGATATGAGGGTTTGG+GGG + chr3_4:14639158-14639177 None:intergenic 45.0%
CATTGGGATATGAGGGTTTG+GGG + chr3_4:14639159-14639178 None:intergenic 45.0%
GTTGGAATTCTCCACGTGTA+AGG - chr3_4:14639337-14639356 Msa0491730:three_prime_UTR 45.0%
AGAGATGAAAGCCTTACACG+TGG + chr3_4:14639351-14639370 None:intergenic 45.0%
GTTTGATTGGAACGACGAAG+AGG - chr3_4:14639669-14639688 Msa0491730:three_prime_UTR 45.0%
GCTCAGATACTCTTCGGATT+AGG + chr3_4:14640093-14640112 None:intergenic 45.0%
! AAACTCTCTCTCTAGCTCAG+AGG + chr3_4:14640154-14640173 None:intergenic 45.0%
TCTGAGCTAGAGAGAGAGTT+TGG - chr3_4:14640153-14640172 Msa0491730:intron 45.0%
! CTAGTGGGCAAGTTTCTATG+AGG - chr3_4:14640205-14640224 Msa0491730:intron 45.0%
AGTTTCTATGAGGTCTACCG+TGG - chr3_4:14640215-14640234 Msa0491730:intron 45.0%
GACTAGGTTACCGTCTCATT+TGG - chr3_4:14640391-14640410 Msa0491730:CDS 45.0%
!!! AAAAGGCGGCTTTTAGGACA+AGG + chr3_4:14640645-14640664 None:intergenic 45.0%
TTACTATTGCGCCAGACAGT+AGG - chr3_4:14640981-14641000 Msa0491730:intron 45.0%
GACAGTAGACTTCTGAGTGA+AGG - chr3_4:14641021-14641040 Msa0491730:intron 45.0%
ACTTCTGAGTGAAGGACTGA+AGG - chr3_4:14641029-14641048 Msa0491730:intron 45.0%
!!! TTTTTTTTTTTGGGGGGGGG+GGG - chr3_4:14641270-14641289 Msa0491730:intron 45.0%
!! ACATAAGCGGCAAGTACTGA+TGG - chr3_4:14641407-14641426 Msa0491730:intron 45.0%
TATCCTTCCGTTGTTCCCAT+TGG - chr3_4:14641518-14641537 Msa0491730:intron 45.0%
TTGACTGCCAATGGGAACAA+CGG + chr3_4:14641528-14641547 None:intergenic 45.0%
TAGAAGCCTTGACTGCCAAT+GGG + chr3_4:14641536-14641555 None:intergenic 45.0%
AAGCATCCTGTTAGCAAGCT+AGG - chr3_4:14641721-14641740 Msa0491730:intron 45.0%
!! CATAGACCTAGCTTGCTAAC+AGG + chr3_4:14641730-14641749 None:intergenic 45.0%
CAAGCTAGGTCTATGTTGAG+AGG - chr3_4:14641735-14641754 Msa0491730:intron 45.0%
GGATGGAAGTAGAGGATTAC+TGG - chr3_4:14641763-14641782 Msa0491730:intron 45.0%
! CATCCAAAAGCGCAGATTCT+GGG + chr3_4:14642673-14642692 None:intergenic 45.0%
! TCATCCAAAAGCGCAGATTC+TGG + chr3_4:14642674-14642693 None:intergenic 45.0%
GCTTCCCTTACTGTCATGTT+AGG - chr3_4:14642904-14642923 Msa0491730:intron 45.0%
!! TCATATTGTGCCGTTTCCAG+AGG - chr3_4:14643213-14643232 Msa0491730:intron 45.0%
! TCTTCACTTGCCTCTGGAAA+CGG + chr3_4:14643226-14643245 None:intergenic 45.0%
TGAGTTTGCCACATATCCTG+AGG + chr3_4:14643386-14643405 None:intergenic 45.0%
ACAGAAGAGACCACACAGAA+TGG - chr3_4:14643702-14643721 Msa0491730:intron 45.0%
AAGAGACCACACAGAATGGA+AGG - chr3_4:14643706-14643725 Msa0491730:intron 45.0%
AGAGACCACACAGAATGGAA+GGG - chr3_4:14643707-14643726 Msa0491730:intron 45.0%
TGCCGATGAAGGTAAAGAAC+AGG - chr3_4:14643749-14643768 Msa0491730:intron 45.0%
GCCGATGAAGGTAAAGAACA+GGG - chr3_4:14643750-14643769 Msa0491730:intron 45.0%
TCACATCTTTAGCAGACCAG+AGG + chr3_4:14644463-14644482 None:intergenic 45.0%
! CTTAAAGCATCAGTGGGACT+TGG + chr3_4:14644518-14644537 None:intergenic 45.0%
CAAGTCCCACTGATGCTTTA+AGG - chr3_4:14644516-14644535 Msa0491730:intron 45.0%
AAGGAATAGATCAGGGCCTT+TGG - chr3_4:14644535-14644554 Msa0491730:CDS 45.0%
! ACACACAACCGCTGATAATG+TGG - chr3_4:14644652-14644671 Msa0491730:CDS 45.0%
! GCTGATAATGTGGAATGTGC+TGG - chr3_4:14644662-14644681 Msa0491730:CDS 45.0%
!! CGGTTTTGTGGGATTGAGTT+AGG + chr3_4:14644990-14645009 None:intergenic 45.0%
CCGTTCATGTCCAACACTAT+TGG - chr3_4:14645109-14645128 Msa0491730:intron 45.0%
CATGTCCAACACTATTGGTG+AGG - chr3_4:14645114-14645133 Msa0491730:intron 45.0%
AAAGCCCTCACCAATAGTGT+TGG + chr3_4:14645122-14645141 None:intergenic 45.0%
! GGTGAGGGCTTTATGAATCT+AGG - chr3_4:14645130-14645149 Msa0491730:intron 45.0%
ACAAGAGGGGAAAGATTTGC+AGG - chr3_4:14645616-14645635 Msa0491730:intron 45.0%
GGTTGCCCAAGAATTGAAGA+GGG + chr3_4:14645725-14645744 None:intergenic 45.0%
TGGTTGCCCAAGAATTGAAG+AGG + chr3_4:14645726-14645745 None:intergenic 45.0%
! TCAGGTCCTAGGAGTTGATT+TGG + chr3_4:14645746-14645765 None:intergenic 45.0%
GGGAGGTTACCATAAAACGA+AGG + chr3_4:14645803-14645822 None:intergenic 45.0%
!! GTGTTAGCATTGGCATAGCA+GGG + chr3_4:14645823-14645842 None:intergenic 45.0%
!! TGTGTTAGCATTGGCATAGC+AGG + chr3_4:14645824-14645843 None:intergenic 45.0%
TCTGGGTATGAAACATCTGC+TGG - chr3_4:14645881-14645900 Msa0491730:intron 45.0%
! GAGCCCGCATAACTTTTCAA+AGG + chr3_4:14645917-14645936 None:intergenic 45.0%
! AGGAGTCATAGTTTGAGGCA+CGG + chr3_4:14645942-14645961 None:intergenic 45.0%
TCCTGAGGAGTCATAGTTTG+AGG + chr3_4:14645947-14645966 None:intergenic 45.0%
TACTAGTGCAAGGAACTTGG+TGG + chr3_4:14646045-14646064 None:intergenic 45.0%
AACCATATTGTGCAGGCTTC+AGG - chr3_4:14646216-14646235 Msa0491730:intron 45.0%
ATCCTGAAGCCTGCACAATA+TGG + chr3_4:14646221-14646240 None:intergenic 45.0%
CGTGCCCAAATTAGTATGCA+AGG + chr3_4:14646306-14646325 None:intergenic 45.0%
!! GCATCAGAGATAGCTTGTTC+CGG - chr3_4:14646379-14646398 Msa0491730:intron 45.0%
ACATGTTGACAGCGCAATCA+AGG + chr3_4:14647238-14647257 None:intergenic 45.0%
TGATACCAGCATGGTACGTA+CGG + chr3_4:14647281-14647300 None:intergenic 45.0%
TGGTATCACACAGATATGCC+AGG - chr3_4:14647293-14647312 Msa0491730:intron 45.0%
TGTTTCAACATCAGGCATCC+TGG + chr3_4:14647314-14647333 None:intergenic 45.0%
CATAGACCTGTGGAGTTAAC+AGG - chr3_4:14647376-14647395 Msa0491730:intron 45.0%
GGAGTCGCACATTTCAACTA+AGG - chr3_4:14647417-14647436 Msa0491730:intron 45.0%
TGGACCTCAAAAGATGGACA+AGG + chr3_4:14647550-14647569 None:intergenic 45.0%
AGATGTTCTGCAGAACACGA+AGG - chr3_4:14647659-14647678 Msa0491730:intron 45.0%
GAGCATGGAAGGAATAAGGT+AGG + chr3_4:14647690-14647709 None:intergenic 45.0%
GAGCTTGGTTATGATCCAGA+AGG + chr3_4:14647784-14647803 None:intergenic 45.0%
! CTGGTTCTCAGGATTCTACA+TGG + chr3_4:14647813-14647832 None:intergenic 45.0%
! CAAGCATGAAACTGGTTCTC+AGG + chr3_4:14647824-14647843 None:intergenic 45.0%
AGCACTTGCGACCTTAAGTA+TGG + chr3_4:14647915-14647934 None:intergenic 45.0%
AGGGCGACTGTCATTCTTAT+AGG - chr3_4:14648296-14648315 Msa0491730:intron 45.0%
GGGCGACTGTCATTCTTATA+GGG - chr3_4:14648297-14648316 Msa0491730:intron 45.0%
GGCGACTGTCATTCTTATAG+GGG - chr3_4:14648298-14648317 Msa0491730:intron 45.0%
GCGACTGTCATTCTTATAGG+GGG - chr3_4:14648299-14648318 Msa0491730:intron 45.0%
TAATTTCATAGGCTGTGGGC+GGG + chr3_4:14648456-14648475 None:intergenic 45.0%
AATGAAAGCCGTGAGGAGAA+TGG - chr3_4:14648589-14648608 Msa0491730:five_prime_UTR 45.0%
ACTCTTGACCATTCTCCTCA+CGG + chr3_4:14648600-14648619 None:intergenic 45.0%
GAGGAGAATGGTCAAGAGTT+TGG - chr3_4:14648601-14648620 Msa0491730:five_prime_UTR 45.0%
!!! TAAAATAATTATTATGTTTT+TGG - chr3_4:14639928-14639947 Msa0491730:intron 5.0%
!!! AATTTTATATATGAATTTAA+TGG - chr3_4:14647730-14647749 Msa0491730:intron 5.0%
TTGGGATATGAGGGTTTGGG+GGG + chr3_4:14639157-14639176 None:intergenic 50.0%
CTCTGAGCTTGTGCTGAATC+CGG - chr3_4:14639566-14639585 Msa0491730:three_prime_UTR 50.0%
!! TAACCTAGTCGGTGCTGGTT+CGG + chr3_4:14640381-14640400 None:intergenic 50.0%
! TGGAGTGTAATGGAGATCGG+AGG - chr3_4:14641173-14641192 Msa0491730:intron 50.0%
!!! TTTTTTTTTTGGGGGGGGGG+GGG - chr3_4:14641271-14641290 Msa0491730:intron 50.0%
GTTGTTCCCATTGGCAGTCA+AGG - chr3_4:14641527-14641546 Msa0491730:intron 50.0%
GTAGAAGCCTTGACTGCCAA+TGG + chr3_4:14641537-14641556 None:intergenic 50.0%
AGGTCTATGTTGAGAGGAGC+AGG - chr3_4:14641741-14641760 Msa0491730:intron 50.0%
GGTCTATGTTGAGAGGAGCA+GGG - chr3_4:14641742-14641761 Msa0491730:intron 50.0%
TATGTTGAGAGGAGCAGGGA+TGG - chr3_4:14641746-14641765 Msa0491730:intron 50.0%
! GAACCCAGAATCTGCGCTTT+TGG - chr3_4:14642667-14642686 Msa0491730:intron 50.0%
AATATGGGATGAGGGAGGTG+AGG - chr3_4:14643183-14643202 Msa0491730:intron 50.0%
ATATGGGATGAGGGAGGTGA+GGG - chr3_4:14643184-14643203 Msa0491730:intron 50.0%
ACAACTCGCCTCAGGATATG+TGG - chr3_4:14643375-14643394 Msa0491730:CDS 50.0%
CGAGGTGAACTTGGCAAACT+CGG - chr3_4:14643478-14643497 Msa0491730:CDS 50.0%
CTTGGCAAACTCGGTACATC+AGG - chr3_4:14643487-14643506 Msa0491730:CDS 50.0%
AGCATCCCTTCCATTCTGTG+TGG + chr3_4:14643715-14643734 None:intergenic 50.0%
ACAGTTAGGACGGCAGAGTT+TGG + chr3_4:14643971-14643990 None:intergenic 50.0%
ACAACGGCATAGCTGCACAT+AGG + chr3_4:14644071-14644090 None:intergenic 50.0%
!! GTGCCCATGATGGGTAACAT+TGG - chr3_4:14644260-14644279 Msa0491730:CDS 50.0%
!! GTGGGACTTGGTGTGTTCAA+TGG + chr3_4:14644506-14644525 None:intergenic 50.0%
!! AACCCACGAAACCGACTTGT+AGG - chr3_4:14645192-14645211 Msa0491730:intron 50.0%
! CACCTACAAGTCGGTTTCGT+GGG + chr3_4:14645197-14645216 None:intergenic 50.0%
! TCACCTACAAGTCGGTTTCG+TGG + chr3_4:14645198-14645217 None:intergenic 50.0%
!! ACGAAACCGACTTGTAGGTG+AGG - chr3_4:14645197-14645216 Msa0491730:intron 50.0%
!! CGAAACCGACTTGTAGGTGA+GGG - chr3_4:14645198-14645217 Msa0491730:intron 50.0%
AGCATCCCTCACCTACAAGT+CGG + chr3_4:14645206-14645225 None:intergenic 50.0%
GGGCAACCAAATCAACTCCT+AGG - chr3_4:14645737-14645756 Msa0491730:intron 50.0%
!! TTAGCATTGGCATAGCAGGG+AGG + chr3_4:14645820-14645839 None:intergenic 50.0%
GCCTCAAACTATGACTCCTC+AGG - chr3_4:14645943-14645962 Msa0491730:intron 50.0%
TGGGTGGCATATTTGAGCGA+CGG + chr3_4:14646071-14646090 None:intergenic 50.0%
TGGCACAAAGTGCAACGCAA+CGG - chr3_4:14646403-14646422 Msa0491730:intron 50.0%
! TTTTCCCGTACGTACCATGC+TGG - chr3_4:14647273-14647292 Msa0491730:intron 50.0%
GATACCAGCATGGTACGTAC+GGG + chr3_4:14647280-14647299 None:intergenic 50.0%
ACCAAGTGAACTTTCCCGTG+AGG - chr3_4:14647464-14647483 Msa0491730:intron 50.0%
ACCTCACGGGAAAGTTCACT+TGG + chr3_4:14647468-14647487 None:intergenic 50.0%
TCCTCTTGTAAGCACCTCAC+GGG + chr3_4:14647481-14647500 None:intergenic 50.0%
CTCCTCTTGTAAGCACCTCA+CGG + chr3_4:14647482-14647501 None:intergenic 50.0%
CATTGAGAGGCTTCAAGCTC+CGG + chr3_4:14647634-14647653 None:intergenic 50.0%
! AAGAAGCACGGCAATGAGCA+TGG + chr3_4:14647705-14647724 None:intergenic 50.0%
AATTTCATAGGCTGTGGGCG+GGG + chr3_4:14648455-14648474 None:intergenic 50.0%
CGATGACAATGAAAGCCGTG+AGG - chr3_4:14648582-14648601 Msa0491730:five_prime_UTR 50.0%
GTCGAGGATCCCTTTGCATT+AGG - chr3_4:14648701-14648720 Msa0491730:five_prime_UTR 50.0%
AGATTGGAGGGGAAGAGAGG+GGG + chr3_4:14639224-14639243 None:intergenic 55.0%
GAGATTGGAGGGGAAGAGAG+GGG + chr3_4:14639225-14639244 None:intergenic 55.0%
CGAGATTGGAGGGGAAGAGA+GGG + chr3_4:14639226-14639245 None:intergenic 55.0%
!!! TTTTTTTTTGGGGGGGGGGG+GGG - chr3_4:14641272-14641291 Msa0491730:intron 55.0%
CTGCCAATGGGAACAACGGA+AGG + chr3_4:14641524-14641543 None:intergenic 55.0%
AGGAGCAGGGATGGAAGTAG+AGG - chr3_4:14641755-14641774 Msa0491730:intron 55.0%
AATGGAGGACAACTCGCCTC+AGG - chr3_4:14643367-14643386 Msa0491730:CDS 55.0%
GGCAAACTCGGTACATCAGG+AGG - chr3_4:14643490-14643509 Msa0491730:CDS 55.0%
ACCTGCTGCTCGTGACCAAT+AGG + chr3_4:14644701-14644720 None:intergenic 55.0%
AGGCATCAGCATGTGCTCTC+TGG - chr3_4:14645863-14645882 Msa0491730:intron 55.0%
GGCATCAGCATGTGCTCTCT+GGG - chr3_4:14645864-14645883 Msa0491730:intron 55.0%
! GCGACGGGTTTACTAGTGCA+AGG + chr3_4:14646055-14646074 None:intergenic 55.0%
GGGTGGCATATTTGAGCGAC+GGG + chr3_4:14646070-14646089 None:intergenic 55.0%
!! CAGAGATAGCTTGTTCCGGC+TGG - chr3_4:14646383-14646402 Msa0491730:intron 55.0%
!! TTGGTTCGGGCTGTGCAGAA+TGG - chr3_4:14647064-14647083 Msa0491730:intron 55.0%
ACGGGCGACAGTTCGATCAA+TGG + chr3_4:14647347-14647366 None:intergenic 55.0%
! TCCCGTGAGGTGCTTACAAG+AGG - chr3_4:14647477-14647496 Msa0491730:intron 55.0%
AGCACGGCAATGAGCATGGA+AGG + chr3_4:14647701-14647720 None:intergenic 55.0%
!! ATGACGGGTGTGTGTGTGTG+TGG - chr3_4:14648675-14648694 Msa0491730:five_prime_UTR 55.0%
! TGACGGGTGTGTGTGTGTGT+GGG - chr3_4:14648676-14648695 Msa0491730:five_prime_UTR 55.0%
GATTGGAGGGGAAGAGAGGG+GGG + chr3_4:14639223-14639242 None:intergenic 60.0%
GCGAGATTGGAGGGGAAGAG+AGG + chr3_4:14639227-14639246 None:intergenic 60.0%
!! TTGCCGAACCAGCACCGACT+AGG - chr3_4:14640375-14640394 Msa0491730:exon 60.0%
GACGGTAACCTAGTCGGTGC+TGG + chr3_4:14640386-14640405 None:intergenic 60.0%
!!! TTTTTTTTGGGGGGGGGGGG+GGG - chr3_4:14641273-14641292 Msa0491730:intron 60.0%
GCCTATTGGTCACGAGCAGC+AGG - chr3_4:14644697-14644716 Msa0491730:CDS 60.0%
GCGTTGCACTTTGTGCCAGC+CGG + chr3_4:14646401-14646420 None:intergenic 60.0%
GAGAGGCTTCAAGCTCCGGT+GGG + chr3_4:14647630-14647649 None:intergenic 60.0%
TGAGAGGCTTCAAGCTCCGG+TGG + chr3_4:14647631-14647650 None:intergenic 60.0%
GACGGGTGTGTGTGTGTGTG+GGG - chr3_4:14648677-14648696 Msa0491730:five_prime_UTR 60.0%
TGTGTGTGTGTGGGGAGTCG+AGG - chr3_4:14648685-14648704 Msa0491730:five_prime_UTR 60.0%
!!! TTTTTTTGGGGGGGGGGGGG+GGG - chr3_4:14641274-14641293 Msa0491730:intron 65.0%
GGGGGGGGGGACTTTATCAG+AGG - chr3_4:14641299-14641318 Msa0491730:intron 65.0%
TGGGCACGGCTTCAATCCCG+AGG - chr3_4:14646318-14646337 Msa0491730:intron 65.0%
!!! TTTTTTGGGGGGGGGGGGGG+GGG - chr3_4:14641275-14641294 Msa0491730:intron 70.0%
GAGGCGGCGGCAGCAAATGC+AGG - chr3_4:14645982-14646001 Msa0491730:intron 70.0%
!! TTTTTGGGGGGGGGGGGGGG+GGG - chr3_4:14641276-14641295 Msa0491730:intron 75.0%
!!! TTTTGGGGGGGGGGGGGGGG+GGG - chr3_4:14641277-14641296 Msa0491730:intron 80.0%
! TTTGGGGGGGGGGGGGGGGG+GGG - chr3_4:14641278-14641297 Msa0491730:intron 85.0%
! TTGGGGGGGGGGGGGGGGGG+GGG - chr3_4:14641279-14641298 Msa0491730:intron 90.0%
! TGGGGGGGGGGGGGGGGGGG+GGG - chr3_4:14641280-14641299 Msa0491730:intron 95.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 14639144 14648898 14639144 ID=Msa0491730;Name=Msa0491730
chr3_4 mRNA 14639144 14648898 14639144 ID=Msa0491730-mRNA-1;Parent=Msa0491730;Name=Msa0491730-mRNA-1;_AED=0.10;_eAED=0.10;_QI=523|0.63|0.41|1|0.45|0.16|12|627|632
chr3_4 exon 14639144 14639744 14639144 ID=Msa0491730-mRNA-1:exon:4323;Parent=Msa0491730-mRNA-1
chr3_4 exon 14640362 14640736 14640362 ID=Msa0491730-mRNA-1:exon:4322;Parent=Msa0491730-mRNA-1
chr3_4 exon 14641528 14641685 14641528 ID=Msa0491730-mRNA-1:exon:4321;Parent=Msa0491730-mRNA-1
chr3_4 exon 14641790 14641905 14641790 ID=Msa0491730-mRNA-1:exon:4320;Parent=Msa0491730-mRNA-1
chr3_4 exon 14641942 14642187 14641942 ID=Msa0491730-mRNA-1:exon:4319;Parent=Msa0491730-mRNA-1
chr3_4 exon 14642230 14642476 14642230 ID=Msa0491730-mRNA-1:exon:4318;Parent=Msa0491730-mRNA-1
chr3_4 exon 14643324 14643397 14643324 ID=Msa0491730-mRNA-1:exon:4317;Parent=Msa0491730-mRNA-1
chr3_4 exon 14643404 14643630 14643404 ID=Msa0491730-mRNA-1:exon:4316;Parent=Msa0491730-mRNA-1
chr3_4 exon 14644207 14644336 14644207 ID=Msa0491730-mRNA-1:exon:4315;Parent=Msa0491730-mRNA-1
chr3_4 exon 14644531 14644613 14644531 ID=Msa0491730-mRNA-1:exon:4314;Parent=Msa0491730-mRNA-1
chr3_4 exon 14644626 14644870 14644626 ID=Msa0491730-mRNA-1:exon:4313;Parent=Msa0491730-mRNA-1
chr3_4 exon 14648352 14648898 14648352 ID=Msa0491730-mRNA-1:exon:4312;Parent=Msa0491730-mRNA-1
chr3_4 five_prime_UTR 14648376 14648898 14648376 ID=Msa0491730-mRNA-1:five_prime_utr;Parent=Msa0491730-mRNA-1
chr3_4 CDS 14648352 14648375 14648352 ID=Msa0491730-mRNA-1:cds;Parent=Msa0491730-mRNA-1
chr3_4 CDS 14644626 14644870 14644626 ID=Msa0491730-mRNA-1:cds;Parent=Msa0491730-mRNA-1
chr3_4 CDS 14644531 14644613 14644531 ID=Msa0491730-mRNA-1:cds;Parent=Msa0491730-mRNA-1
chr3_4 CDS 14644207 14644336 14644207 ID=Msa0491730-mRNA-1:cds;Parent=Msa0491730-mRNA-1
chr3_4 CDS 14643404 14643630 14643404 ID=Msa0491730-mRNA-1:cds;Parent=Msa0491730-mRNA-1
chr3_4 CDS 14643324 14643397 14643324 ID=Msa0491730-mRNA-1:cds;Parent=Msa0491730-mRNA-1
chr3_4 CDS 14642230 14642476 14642230 ID=Msa0491730-mRNA-1:cds;Parent=Msa0491730-mRNA-1
chr3_4 CDS 14641942 14642187 14641942 ID=Msa0491730-mRNA-1:cds;Parent=Msa0491730-mRNA-1
chr3_4 CDS 14641790 14641905 14641790 ID=Msa0491730-mRNA-1:cds;Parent=Msa0491730-mRNA-1
chr3_4 CDS 14641528 14641685 14641528 ID=Msa0491730-mRNA-1:cds;Parent=Msa0491730-mRNA-1
chr3_4 CDS 14640388 14640736 14640388 ID=Msa0491730-mRNA-1:cds;Parent=Msa0491730-mRNA-1
chr3_4 three_prime_UTR 14640362 14640387 14640362 ID=Msa0491730-mRNA-1:three_prime_utr;Parent=Msa0491730-mRNA-1
chr3_4 three_prime_UTR 14639144 14639744 14639144 ID=Msa0491730-mRNA-1:three_prime_utr;Parent=Msa0491730-mRNA-1
Gene Sequence

>Msa0491730

ATGTTTGATTGGAACGACGAAGAGCTTGCTAATATAATATGGGATGAGGGAGGTGAGGGCGATGATCATATTGTGCCGTTTCCAGAGGCAAGTGAAGATCTTAAAAACAAGAAAGAAGTGAATCAGGAACCAGCTGTGTGTAAGCTTAATAAGCGGAAGCAACCCGAGACGAAAGCTGATTTTGATGGAAAACTAGGAAGCAGTTCGAACCTTAACAATAATGGAGGACAACTCGCCTCAGGATATGTGGCAAACTCATGCTCTGACTTTGCAGCTAAAATTGATCAGGATTCTCTGAGTACTGAACTTTCTAAATATCGAGGTGAACTTGGCAAACTCGGTACATCAGGAGAAGAGACCACACAGAATGGAAGGGATGCTGAATTTTATCAAAATGCCGATGAAGGTAAAGAACAGGGTGATTTTGCTGATTATGACTGGGCTAACATAGGAAGTTTTGATGACCTTGATCGGATTTTCAGCAATGATGACCCTATATTTGGCCATGCAAGTCTTGATAATTCTGATGACCTCTGGTCTGCTAAAGATGTGAGTAGCAATCAAGCATCAGTGCCATTGAACACACCAAGTCCCACTGATGCTTTAAGGAATAGATCAGGGCCTTTGGAAATCAAAGAAGAACATGTTCACTGTAGTGATCAATCATTTTCCCTTAACTACGAAAAGATTTCTGGTCCTGCTTGTCAGAAAAATTCACACACAACCGCTGATAATGTGGAATGTGCTGGAGATAGAAGTAAGCCTATTGGTCACGAGCAGCAGAGTTTTAGCCAAAAGTACCAGTTGAAAACACGGAAAAAGTCAAAGATAAAACAAGAGGGGAAAGATTTGCAGGATTTTTATGGTAATTGGTCTTCTTCAGCAACATCGGCAAGACAATTTGAGAGTCAATTGACACCTTCTGTGTTACAATCATCTCCCTCTTCAATTCTTGGGCAACCAAATCAACTCCTAGGACCTGAAACATATCAGAACATCATAAATCCATATGTGGCACCTTCGTTTTATGGAAATCTTAGGCATCAGCATGTGCTCTCTGGGTATGAAACATCTGCTGGTCCGTTGAGTCCTTTGAAAAGTTATGCGGGCTCAGCCGTGCCTCAAACTATGACTCCTCAGGAGAAAATTGAAAAATTGAGGCGGCGGCAGCAAATGCAGGCAATGCTTGCTATTCAGAAACAACAGCAAGTACTGGGCCACCAAGTTCCTTGCACTAGTAAACCCGTCGCTCAAATATGCCACCCACAAATTCAAAATCTTAGTACTCTTCCTCTAATTGAACAAGATGATTCTAATACAATATCTCTTGCAACTGATGATGATTTTGTTGAAGAAACCATATTGTGCAGGCTTCAGGATGTTATATCAAAGTTAGATGTCACAACAAGACTCTGCATCAGAGATAGCTTGTTCCGGCTGGCACAAAGTGCAACGCAACGGCATTATGCTAGTGACACAAGCATTACAAACAAAAATAACAAAGAAGAATATGCCGTTTTTGCAAGAGAAGAAAGCAGTAGCCAAAACAGATATGCCAGGATGCCTGATGTTGAAACAGAGACGAATTCCATTGATCGAACTGTCGCCCGTTTACTCTTTCATAGACCTGTGGAGTTAACAGGAAATTATTCTGACAAACTGGAGTCGCACATTTCAACTAAGGTGCAATGTGAAAGCAAAGCTGCTAACCAAGTGAACTTTCCCGTGAGGTGCTTACAAGAGGAGAACTTGAGAAGTAATCAACAACTTTCTCACATTGGGTTAGAGAATCCTTGTCCATCTTTTGAGGTCCAACCTATGGATCAGACTAAGAACAGTCTCAGCATAGGTACTTCAGAAAATGCATCTAACCCACCGGAGCTTGAAGCCTCTCAATGA
Protein sequence

>Msa0491730

MFDWNDEELANIIWDEGGEGDDHIVPFPEASEDLKNKKEVNQEPAVCKLNKRKQPETKADFDGKLGSSSNLNNNGGQLASGYVANSCSDFAAKIDQDSLSTELSKYRGELGKLGTSGEETTQNGRDAEFYQNADEGKEQGDFADYDWANIGSFDDLDRIFSNDDPIFGHASLDNSDDLWSAKDVSSNQASVPLNTPSPTDALRNRSGPLEIKEEHVHCSDQSFSLNYEKISGPACQKNSHTTADNVECAGDRSKPIGHEQQSFSQKYQLKTRKKSKIKQEGKDLQDFYGNWSSSATSARQFESQLTPSVLQSSPSSILGQPNQLLGPETYQNIINPYVAPSFYGNLRHQHVLSGYETSAGPLSPLKSYAGSAVPQTMTPQEKIEKLRRRQQMQAMLAIQKQQQVLGHQVPCTSKPVAQICHPQIQNLSTLPLIEQDDSNTISLATDDDFVEETILCRLQDVISKLDVTTRLCIRDSLFRLAQSATQRHYASDTSITNKNNKEEYAVFAREESSSQNRYARMPDVETETNSIDRTVARLLFHRPVELTGNYSDKLESHISTKVQCESKAANQVNFPVRCLQEENLRSNQQLSHIGLENPCPSFEVQPMDQTKNSLSIGTSENASNPPELEASQ*