AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0212180

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0212180 MtrunA17_Chr2g0311521 75.972 283 17 5 75 307 256 537 4.43e-133 408
Msa0212180 MtrunA17_Chr2g0311521 74.603 63 13 1 304 363 635 697 8.87e-18 86.3
Msa0212180 MtrunA17_Chr2g0311521 53.571 56 26 0 363 418 194 249 1.58e-13 73.2
Msa0212180 MtrunA17_Chr2g0311551 70.567 282 34 4 75 307 253 534 6.35e-122 379
Msa0212180 MtrunA17_Chr2g0311551 71.429 84 13 2 291 363 608 691 2.88e-25 109
Msa0212180 MtrunA17_Chr2g0311551 52.542 59 28 0 363 421 191 249 1.48e-14 76.3
Msa0212180 MtrunA17_Chr2g0311541 69.014 284 37 5 75 307 12 295 9.95e-120 367
Msa0212180 MtrunA17_Chr2g0311541 87.931 58 7 0 306 363 397 454 2.35e-22 100
Msa0212180 MtrunA17_Chr2g0311511 53.929 280 72 5 79 301 34 313 1.08e-83 271
Msa0212180 MtrunA17_Chr8g0338511 38.667 300 132 5 60 307 11 310 5.37e-60 202
Msa0212180 MtrunA17_Chr8g0338521 40.625 256 117 3 87 307 16 271 9.30e-55 186
Msa0212180 MtrunA17_Chr8g0338501 38.194 288 123 6 71 307 48 331 8.56e-52 187
Msa0212180 MtrunA17_Chr8g0338471 38.710 279 116 6 80 307 28 302 1.04e-51 186
Msa0212180 MtrunA17_Chr5g0399591 36.194 268 123 9 87 307 40 306 9.01e-41 155
Msa0212180 MtrunA17_Chr5g0399561 34.328 268 128 8 87 307 41 307 1.22e-36 143
Msa0212180 MtrunA17_Chr2g0311561 91.525 59 5 0 362 420 178 236 6.52e-30 117
Msa0212180 MtrunA17_Chr8g0338531 35.111 225 101 4 128 307 8 232 1.12e-29 122
Msa0212180 MtrunA17_Chr5g0394381 34.764 233 112 7 88 285 40 267 8.25e-28 116
Msa0212180 MtrunA17_Chr4g0063701 37.824 193 94 7 87 263 54 236 2.81e-23 103
Msa0212180 MtrunA17_Chr5g0428801 55.224 67 30 0 358 424 192 258 4.76e-18 84.7
Msa0212180 MtrunA17_Chr4g0063691 34.437 151 81 3 88 221 54 203 3.52e-17 84.3
Msa0212180 MtrunA17_Chr1g0202331 30.667 225 128 8 47 251 8 224 5.19e-17 84.0
Msa0212180 MtrunA17_Chr5g0405581 55.224 67 29 1 358 423 193 259 1.63e-15 77.0
Msa0212180 MtrunA17_Chr8g0357311 55.932 59 26 0 358 416 189 247 8.02e-15 74.3
Msa0212180 MtrunA17_Chr8g0352471 54.839 62 28 0 358 419 189 250 1.70e-14 74.3
Msa0212180 MtrunA17_Chr8g0371781 47.619 84 42 2 342 423 179 262 2.71e-14 73.6
Msa0212180 MtrunA17_Chr4g0037351 51.515 66 32 0 358 423 190 255 4.28e-14 73.2
Msa0212180 MtrunA17_Chr3g0142781 48.000 75 38 1 358 431 190 264 4.82e-14 72.8
Msa0212180 MtrunA17_Chr8g0392961 38.947 95 57 1 326 420 156 249 8.70e-14 70.9
Msa0212180 MtrunA17_Chr7g0237351 29.245 212 122 8 87 270 44 255 5.09e-13 71.2
Msa0212180 MtrunA17_Chr3g0106221 31.646 158 86 4 87 222 38 195 6.12e-13 70.9
Msa0212180 MtrunA17_Chr5g0405611 52.459 61 29 0 358 418 250 310 7.26e-13 69.7
Msa0212180 MtrunA17_Chr1g0154591 50.909 55 27 0 362 416 178 232 1.06e-12 67.8
Msa0212180 MtrunA17_Chr3g0141341 47.541 61 32 0 360 420 175 235 1.29e-12 67.4
Msa0212180 MtrunA17_Chr1g0156711 46.753 77 38 2 360 435 189 263 2.06e-12 67.8
Msa0212180 MtrunA17_Chr3g0134291 27.670 206 123 6 87 266 42 247 2.85e-12 68.9
Msa0212180 MtrunA17_Chr3g0106141 32.468 154 86 5 87 222 36 189 3.44e-12 68.6
Msa0212180 MtrunA17_Chr0c04g0492001 26.699 206 125 5 87 266 42 247 4.50e-12 68.2
Msa0212180 MtrunA17_Chr0c04g0492031 26.699 206 125 5 87 266 42 247 4.54e-12 68.2
Msa0212180 MtrunA17_Chr2g0311501 56.897 58 23 2 362 418 128 184 7.15e-12 64.3
Msa0212180 MtrunA17_Chr4g0037331 50.000 58 29 0 358 415 182 239 7.92e-12 66.2
Msa0212180 MtrunA17_Chr6g0482741 37.113 97 53 2 322 416 150 240 9.01e-12 65.1
Msa0212180 MtrunA17_Chr3g0106131 30.252 238 120 12 87 283 36 268 1.09e-11 67.0
Msa0212180 MtrunA17_Chr3g0106121 33.117 154 85 5 87 222 36 189 2.10e-11 66.2
Msa0212180 MtrunA17_Chr3g0106151 31.818 154 87 5 87 222 39 192 2.98e-11 65.9
Msa0212180 MtrunA17_Chr2g0312181 46.774 62 32 1 356 416 182 243 3.16e-11 63.5
Msa0212180 MtrunA17_Chr1g0180161 42.308 78 42 2 342 416 165 242 3.38e-11 63.5
Msa0212180 MtrunA17_Chr2g0323241 31.953 169 91 4 93 240 46 211 4.25e-11 64.7
Msa0212180 MtrunA17_Chr3g0106211 31.613 155 87 5 87 222 39 193 6.39e-11 64.7
Msa0212180 MtrunA17_Chr8g0351851 53.704 54 25 0 362 415 184 237 9.08e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0212180 AT5G24620.2 44.578 83 44 1 336 416 52 134 1.04e-15 78.2
Msa0212180 AT5G24620.1 41.489 94 51 2 336 427 169 260 1.35e-15 79.0
Msa0212180 AT5G24620.3 44.578 83 44 1 336 416 245 327 1.92e-15 79.0
Msa0212180 AT5G24620.4 44.578 83 44 1 336 416 224 306 1.99e-15 78.6
Msa0212180 AT5G24080.2 31.053 190 107 8 87 253 46 234 9.35e-15 77.4
Msa0212180 AT2G17860.1 54.237 59 27 0 358 416 191 249 1.15e-14 73.9
Msa0212180 AT4G36010.1 48.485 66 34 0 358 423 192 257 7.05e-14 72.4
Msa0212180 AT4G36010.2 48.485 66 34 0 358 423 192 257 7.05e-14 72.4
Msa0212180 AT4G36000.2 52.542 59 28 0 358 416 80 138 2.19e-13 69.3
Msa0212180 AT4G36000.1 52.542 59 28 0 358 416 80 138 2.19e-13 69.3
Msa0212180 AT1G75050.1 52.632 57 27 0 360 416 187 243 3.04e-13 69.7
Msa0212180 AT1G75040.1 45.205 73 38 1 346 416 167 239 3.41e-13 69.3
Msa0212180 AT4G24180.6 32.237 152 77 4 270 416 126 256 7.20e-13 68.9
Msa0212180 AT4G24180.5 32.237 152 77 4 270 416 121 251 7.55e-13 68.9
Msa0212180 AT4G24180.1 32.237 152 77 4 270 416 126 256 8.72e-13 69.3
Msa0212180 AT4G24180.2 32.237 152 77 4 270 416 121 251 8.90e-13 69.3
Msa0212180 AT4G38670.3 53.333 60 27 1 358 416 188 247 1.82e-12 68.2
Msa0212180 AT4G38670.1 53.333 60 27 1 358 416 188 247 1.82e-12 68.2
Msa0212180 AT1G75030.1 50.877 57 28 0 360 416 187 243 2.06e-12 67.4
Msa0212180 AT4G38670.2 53.333 60 27 1 358 416 172 231 2.26e-12 67.4
Msa0212180 AT1G19320.1 51.852 54 26 0 362 415 193 246 5.00e-12 66.2
Msa0212180 AT2G24810.1 52.830 53 25 0 363 415 140 192 5.14e-12 65.1
Msa0212180 AT4G38660.1 47.541 61 32 0 360 420 189 249 1.14e-11 66.2
Msa0212180 AT4G38660.2 47.541 61 32 0 360 420 167 227 1.42e-11 65.9
Msa0212180 AT1G75800.1 49.206 63 31 1 362 423 193 255 2.37e-11 65.1
Msa0212180 AT2G41890.1 31.217 189 96 8 56 222 17 193 3.75e-11 65.9
Msa0212180 AT5G40020.1 37.778 90 50 2 329 416 163 248 4.65e-11 63.5
Msa0212180 AT1G20030.1 47.619 63 32 1 362 423 173 235 6.34e-11 63.5
Msa0212180 AT1G20030.2 47.619 63 32 1 362 423 190 252 6.47e-11 63.9

Find 157 sgRNAs with CRISPR-Local

Find 1093 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTCCTCTCTTTGGATCTTT+AGG 0.099961 2_1:+54100864 None:intergenic
CATTGTGATTTCAGTTCTTT+TGG 0.133605 2_1:-54100334 Msa0212180:CDS
GAACTTAGCTCGCAAGTTTC+TGG 0.142647 2_1:+54097962 None:intergenic
TATAGCTATCCTTACGATTA+TGG 0.154510 2_1:-54097902 Msa0212180:CDS
TTCACATCCTTTCCTTCTTT+TGG 0.183224 2_1:-54112780 Msa0212180:five_prime_UTR
GTCCTCTCTTTGGATCTTTA+GGG 0.199891 2_1:+54100865 None:intergenic
GGGGCATCTTGGAAGCATTT+TGG 0.221291 2_1:-54112086 Msa0212180:CDS
TAAATGAGAAGCAAAATAAA+AGG 0.237927 2_1:+54113253 None:intergenic
AATTGCTTGGCAAATTTATA+AGG 0.241578 2_1:+54101111 None:intergenic
AAATTTGAATTTGCCATATC+TGG 0.244529 2_1:+54112476 None:intergenic
TGGAGACAACCCTGCTTCTA+AGG 0.249671 2_1:-54101441 Msa0212180:CDS
ACCCAACTTTGTCCTCTCTT+TGG 0.266419 2_1:+54100855 None:intergenic
AGTTCATATTTAAGCTTTAG+AGG 0.267425 2_1:-54112306 Msa0212180:five_prime_UTR
ACCACTTTCCCTCTCAATTT+CGG 0.284978 2_1:-54112985 Msa0212180:five_prime_UTR
GTAAATGATCCGGCGGTAAA+AGG 0.304882 2_1:-54100435 Msa0212180:CDS
GAAGCGTATGTGTGTTGTTT+TGG 0.306453 2_1:+54113171 None:intergenic
AAGAAATAATTTGAGGGGTT+TGG 0.331226 2_1:+54112900 None:intergenic
ATTATGCAGCTTAGCATCAT+TGG 0.334402 2_1:-54101606 Msa0212180:intron
ATAGCTATCCTTACGATTAT+GGG 0.345537 2_1:-54097901 Msa0212180:CDS
AATGTTGATGAGGTTTAGAT+TGG 0.346770 2_1:-54112502 Msa0212180:five_prime_UTR
GAGAATTCGGTAAAGTATTA+AGG 0.349220 2_1:-54112022 Msa0212180:intron
TGAGAGGGAAAGTGGTGATT+GGG 0.352863 2_1:+54112992 None:intergenic
TAAACTTCCTATTAGGGCCT+TGG 0.355353 2_1:-54112640 Msa0212180:five_prime_UTR
AAGAAGCTTCCACTATCTTA+TGG 0.360174 2_1:-54100459 Msa0212180:CDS
ATATCCACCAAGGCCCTAAT+AGG 0.360630 2_1:+54112633 None:intergenic
TGCAAGGAAAAGAGGTGTTT+CGG 0.363745 2_1:+54112264 None:intergenic
TCCGTTGAGAATGCCCCATT+TGG 0.365489 2_1:+54100945 None:intergenic
ACATCAGGTACAATTTCTAA+TGG 0.365880 2_1:-54101338 Msa0212180:intron
TGGTGAGTCACTTACTGCTT+CGG 0.369230 2_1:-54101564 Msa0212180:CDS
GACTATAATAACTTTGGCTC+CGG 0.372640 2_1:-54112107 Msa0212180:CDS
GAGCTAACCTCCGCCGCGTT+GGG 0.372813 2_1:-54112843 Msa0212180:five_prime_UTR
GGTGAGTCACTTACTGCTTC+GGG 0.375213 2_1:-54101563 Msa0212180:CDS
GCCAGCAAGAAAAGCTCATT+TGG 0.377483 2_1:+54101512 None:intergenic
AGTTGCTACGCGGGAGAATT+CGG 0.383804 2_1:-54112035 Msa0212180:CDS
CCGATTGACTATAATAACTT+TGG 0.396388 2_1:-54112113 Msa0212180:CDS
TTCAACACCATTACTTGATT+CGG 0.398012 2_1:+54101224 None:intergenic
TTTAGATTGGACACCAGATA+TGG 0.401781 2_1:-54112489 Msa0212180:five_prime_UTR
TTGAGAGGGAAAGTGGTGAT+TGG 0.411991 2_1:+54112991 None:intergenic
CCAAAGTTATTATAGTCAAT+CGG 0.417303 2_1:+54112113 None:intergenic
ACTTTGGCTCCGGGGCATCT+TGG 0.423683 2_1:-54112097 Msa0212180:CDS
CAAAGTTATTATAGTCAATC+GGG 0.426879 2_1:+54112114 None:intergenic
GAGGAACTCAATGGTGGCGG+TGG 0.428409 2_1:+54113073 None:intergenic
ATTAAATGATTCTCGTGGTT+TGG 0.429869 2_1:-54101405 Msa0212180:CDS
TAGATGTTAAAATTTATGTT+TGG 0.430125 2_1:-54112202 Msa0212180:five_prime_UTR
CCCTCAAATTATTTCTTGAT+CGG 0.433139 2_1:-54112894 Msa0212180:five_prime_UTR
TTTATTACTGTTGTTTGTGT+TGG 0.434494 2_1:-54112166 Msa0212180:five_prime_UTR
AAGAGAGTGATAACAATTGA+TGG 0.438375 2_1:+54113196 None:intergenic
TTTCTATCAGCAATCCAAAT+GGG 0.447906 2_1:-54100959 Msa0212180:CDS
ATCCAAGTTTCAATTCCATA+AGG 0.449096 2_1:+54110395 None:intergenic
TGCCTTATGGAATTGAAACT+TGG 0.452174 2_1:-54110397 Msa0212180:CDS
TACAAGATGATGCCATCATT+TGG 0.456066 2_1:-54101472 Msa0212180:CDS
GAAGAAAGATCATGATACTT+TGG 0.456854 2_1:-54100358 Msa0212180:CDS
AGAAAAGCTCATTTGGAAGT+TGG 0.459486 2_1:+54101519 None:intergenic
GATCAAGGTGTAATTGTTGT+TGG 0.460616 2_1:-54101584 Msa0212180:CDS
ACTTCCTATTAGGGCCTTGG+TGG 0.463539 2_1:-54112637 Msa0212180:five_prime_UTR
CCGATCAAGAAATAATTTGA+GGG 0.464382 2_1:+54112894 None:intergenic
AATCTTGATCCCTTAGAAGC+AGG 0.465791 2_1:+54101431 None:intergenic
GGAGCTAACCTCCGCCGCGT+TGG 0.465849 2_1:-54112844 Msa0212180:five_prime_UTR
AATCAAGTAATGGTGTTGAA+TGG 0.470273 2_1:-54101221 Msa0212180:CDS
TAGAGATGGCTGTGGTTGGT+AGG 0.471009 2_1:-54110372 Msa0212180:CDS
TCCGATCAAGAAATAATTTG+AGG 0.471017 2_1:+54112893 None:intergenic
CGGCGGAGGTTAGCTCCGGC+AGG 0.473991 2_1:+54112850 None:intergenic
ATCTTATGGTGTAAATGATC+CGG 0.475532 2_1:-54100445 Msa0212180:CDS
TAAGGATAGCTATAAGCATC+AGG 0.485045 2_1:+54097911 None:intergenic
AAATGAGAAGCAAAATAAAA+GGG 0.487756 2_1:+54113254 None:intergenic
TTATTGAAGAGGAGGAAGAG+AGG 0.488135 2_1:+54113054 None:intergenic
TCCAAAGAGAGGACAAAGTT+GGG 0.492945 2_1:-54100856 Msa0212180:CDS
ATCCAAAGAGAGGACAAAGT+TGG 0.493498 2_1:-54100857 Msa0212180:CDS
ACTATAATAACTTTGGCTCC+GGG 0.497516 2_1:-54112106 Msa0212180:CDS
TGTTTGCATTCTACACTCCT+AGG 0.498274 2_1:-54100804 Msa0212180:CDS
AACCTCACGCGTGCATATCA+TGG 0.500674 2_1:+54112139 None:intergenic
GCCATCATTTGGTATGCAAA+TGG 0.501021 2_1:-54101461 Msa0212180:CDS
TAAATTAGTGGTTATTGAAG+AGG 0.504661 2_1:+54113043 None:intergenic
AGAGATGGCTGTGGTTGGTA+GGG 0.508319 2_1:-54110371 Msa0212180:CDS
AACGCGGCGGAGGTTAGCTC+CGG 0.510683 2_1:+54112846 None:intergenic
TCCATAACTCTAAACCTTGA+GGG 0.511963 2_1:+54101372 None:intergenic
ATCTTGATCCCTTAGAAGCA+GGG 0.513046 2_1:+54101432 None:intergenic
AAACTTCATCTACAAGAGGA+TGG 0.517032 2_1:-54101149 Msa0212180:CDS
GAGAGGGAAAGTGGTGATTG+GGG 0.517122 2_1:+54112993 None:intergenic
GTTGGTAGGGAATTGAAACT+TGG 0.518117 2_1:-54110358 Msa0212180:CDS
AGGAACTCAATGGTGGCGGT+GGG 0.518263 2_1:+54113074 None:intergenic
TTCACTGGTGACCACCCTGC+CGG 0.519570 2_1:-54112865 Msa0212180:five_prime_UTR
GACGATTCCCAACGCGGCGG+AGG 0.522387 2_1:+54112836 None:intergenic
AATGGTCTAATGAATGATGA+TGG 0.522419 2_1:-54101320 Msa0212180:CDS
GACGGAGAATTAGCAGTGAC+TGG 0.522995 2_1:+54113114 None:intergenic
CGTTCAACTTCTCACAAGGA+AGG 0.524847 2_1:-54101175 Msa0212180:CDS
TTCTAATATGCAAGGAAAAG+AGG 0.526368 2_1:+54112256 None:intergenic
TCATTTACACCATAAGATAG+TGG 0.527988 2_1:+54100450 None:intergenic
AGGTTACATCAATATAAAGT+TGG 0.528967 2_1:-54112554 Msa0212180:five_prime_UTR
ATCTTTCTTCTCTTCTGACA+AGG 0.531408 2_1:+54100371 None:intergenic
TGCTATGGTGGAGGTTGTCA+TGG 0.531810 2_1:+54113141 None:intergenic
ATTAGTGGTTATTGAAGAGG+AGG 0.532232 2_1:+54113046 None:intergenic
TCCATTTGCATACCAAATGA+TGG 0.533812 2_1:+54101460 None:intergenic
GGCCTGTAACTGTAATTGCT+TGG 0.534016 2_1:+54101098 None:intergenic
TTGGTGCTCACTAACCCTCA+AGG 0.536706 2_1:-54101386 Msa0212180:intron
AGAGATCATCATGGGAAAGA+AGG 0.537160 2_1:+54112924 None:intergenic
AACTTCATCTACAAGAGGAT+GGG 0.538380 2_1:-54101148 Msa0212180:CDS
GGCGGTGGGGTTGTCAAAGG+AGG 0.543196 2_1:+54113088 None:intergenic
GGAGACAACCCTGCTTCTAA+GGG 0.550895 2_1:-54101440 Msa0212180:CDS
AGAGAGTGATAACAATTGAT+GGG 0.551936 2_1:+54113197 None:intergenic
ATCTTTAGGGTAAAATGCAA+TGG 0.556056 2_1:+54100878 None:intergenic
ATATGAAACTCACCAAAAGA+AGG 0.557803 2_1:+54112768 None:intergenic
GCCGAAATTGAGAGGGAAAG+TGG 0.560029 2_1:+54112984 None:intergenic
GGAGGAAGAGAGGAACTCAA+TGG 0.562267 2_1:+54113064 None:intergenic
GGGTGAATTGATTTAAAAGA+CGG 0.563202 2_1:+54112228 None:intergenic
GGTGGCGGTGGGGTTGTCAA+AGG 0.565580 2_1:+54113085 None:intergenic
CGGTGTGATTCTAATATGCA+AGG 0.573418 2_1:+54112248 None:intergenic
AAACTCACCAAAAGAAGGAA+AGG 0.574402 2_1:+54112773 None:intergenic
AGCTTAGCATCATTGGATCA+AGG 0.579652 2_1:-54101599 Msa0212180:intron
GTGGGGTTGTCAAAGGAGGT+CGG 0.582534 2_1:+54113092 None:intergenic
CGATCAAGAAATAATTTGAG+GGG 0.583773 2_1:+54112895 None:intergenic
CTTACTCTCTTGCATTCAAG+AGG 0.585604 2_1:-54097940 Msa0212180:CDS
CATTCTACACTCCTAGGTGA+AGG 0.589124 2_1:-54100798 Msa0212180:intron
GGATTAGAGATGGCTGTGGT+TGG 0.589272 2_1:-54110376 Msa0212180:CDS
TTACTCTCTTGCATTCAAGA+GGG 0.590285 2_1:-54097939 Msa0212180:CDS
CTATAATAACTTTGGCTCCG+GGG 0.595776 2_1:-54112105 Msa0212180:CDS
TCCAAATGGGGCATTCTCAA+CGG 0.598057 2_1:-54100946 Msa0212180:CDS
TCATGGTGGCCGAAATTGAG+AGG 0.598337 2_1:+54112976 None:intergenic
GGAACTCAATGGTGGCGGTG+GGG 0.599809 2_1:+54113075 None:intergenic
GGCGGAGGTTAGCTCCGGCA+GGG 0.600125 2_1:+54112851 None:intergenic
ATTGAAACTTGGATTAGAGA+TGG 0.603851 2_1:-54110386 Msa0212180:CDS
GTGACTGGAAGTTGCTATGG+TGG 0.604198 2_1:+54113129 None:intergenic
GCAGTGACTGGAAGTTGCTA+TGG 0.606692 2_1:+54113126 None:intergenic
CTTGGATTAGAGAACTTGAG+AGG 0.607616 2_1:-54110340 Msa0212180:intron
AGAGAGGAACTCAATGGTGG+CGG 0.609170 2_1:+54113070 None:intergenic
TTGATATTAAATGATTCTCG+TGG 0.610910 2_1:-54101410 Msa0212180:CDS
TACCCTAAAGATCCAAAGAG+AGG 0.610937 2_1:-54100867 Msa0212180:CDS
TTCTATCAGCAATCCAAATG+GGG 0.611333 2_1:-54100958 Msa0212180:CDS
AAAATGCTTCCAAGATGCCC+CGG 0.614576 2_1:+54112088 None:intergenic
GTTTAAACTTCATCTACAAG+AGG 0.614873 2_1:-54101153 Msa0212180:CDS
ATTAGTACCGAATCAAGTAA+TGG 0.616385 2_1:-54101231 Msa0212180:CDS
TTTCTTCTCTTCTGACAAGG+AGG 0.619267 2_1:+54100374 None:intergenic
GGTTGTCAAAGGAGGTCGGA+CGG 0.619566 2_1:+54113096 None:intergenic
ACGTTCTGTAGTTGCTACGC+GGG 0.619851 2_1:-54112044 Msa0212180:CDS
GTTGTTAAGAAATGTTGATG+AGG 0.623580 2_1:-54112512 Msa0212180:five_prime_UTR
TTCGGTACTAATGTGTCAGT+AGG 0.630587 2_1:+54101242 None:intergenic
GGAGGTTAGCTCCGGCAGGG+TGG 0.631714 2_1:+54112854 None:intergenic
GGGTTTGGTAGAGATCATCA+TGG 0.636172 2_1:+54112915 None:intergenic
GGAAATCTTTCTTCACGACA+AGG 0.636675 2_1:-54101200 Msa0212180:CDS
ACTGGAAGTTGCTATGGTGG+AGG 0.640094 2_1:+54113132 None:intergenic
CGCCATGATATGCACGCGTG+AGG 0.643515 2_1:-54112141 Msa0212180:exon
GGCATAGACGATTCCCAACG+CGG 0.650562 2_1:+54112830 None:intergenic
AAAGTTATTATAGTCAATCG+GGG 0.658248 2_1:+54112115 None:intergenic
GGTTTGGTAGAGATCATCAT+GGG 0.659215 2_1:+54112916 None:intergenic
CATGGTGGCCGAAATTGAGA+GGG 0.659216 2_1:+54112977 None:intergenic
AACGTTCTGTAGTTGCTACG+CGG 0.664024 2_1:-54112045 Msa0212180:CDS
CAGTAATAAAATCACATCAG+AGG 0.670525 2_1:+54112179 None:intergenic
GGATCGTTCAACTTCTCACA+AGG 0.677019 2_1:-54101179 Msa0212180:CDS
TTATGGTGTAAATGATCCGG+CGG 0.678785 2_1:-54100442 Msa0212180:CDS
GGAAGAGAGGAACTCAATGG+TGG 0.679736 2_1:+54113067 None:intergenic
ACTTGGATTAGAGATGGCTG+TGG 0.686402 2_1:-54110380 Msa0212180:CDS
GGGAATCGTCTATGCCACGC+CGG 0.705598 2_1:-54112823 Msa0212180:five_prime_UTR
TTAGTCTATTATATCCACCA+AGG 0.713327 2_1:+54112623 None:intergenic
ACCCACATACACCTTCACCT+AGG 0.724507 2_1:+54100787 None:intergenic
ATAGACGATTCCCAACGCGG+CGG 0.764748 2_1:+54112833 None:intergenic
GATGGGAAAAGAAACACGTG+TGG 0.771883 2_1:+54113214 None:intergenic
CTCACGCGTGCATATCATGG+CGG 0.777809 2_1:+54112142 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATATATATATATAAA+AGG - chr2_1:54101732-54101751 Msa0212180:intron 0.0%
!!! GAGATTTAATTATTTATTTT+CGG - chr2_1:54098312-54098331 Msa0212180:intron 10.0%
!! AATCAAATTAAAATGATAAA+TGG + chr2_1:54099517-54099536 None:intergenic 10.0%
!!! ATTTTAATTTGATTTGTAAT+TGG - chr2_1:54099523-54099542 Msa0212180:intron 10.0%
!!! TTTTAATTTGATTTGTAATT+GGG - chr2_1:54099524-54099543 Msa0212180:intron 10.0%
!! ATGTTTATCAAAATATAATT+GGG - chr2_1:54101613-54101632 Msa0212180:intron 10.0%
!! TTATTATAGTACTAAATTTA+TGG - chr2_1:54101678-54101697 Msa0212180:intron 10.0%
!! AAATAATACATTATTAAGTT+TGG - chr2_1:54106379-54106398 Msa0212180:intron 10.0%
!! AATAATACATTATTAAGTTT+GGG - chr2_1:54106380-54106399 Msa0212180:intron 10.0%
!! TAAAAATTAATTTAGAGACA+AGG + chr2_1:54098291-54098310 None:intergenic 15.0%
!!! AATTATTTATTTTCGGATTT+TGG - chr2_1:54098319-54098338 Msa0212180:intron 15.0%
!!! TTGATTTTCAATGATAAAAT+GGG + chr2_1:54098456-54098475 None:intergenic 15.0%
!!! ATAAATTTTAACATCTAACA+GGG + chr2_1:54098824-54098843 None:intergenic 15.0%
!! TAGATGTTAAAATTTATGTT+TGG - chr2_1:54098827-54098846 Msa0212180:intron 15.0%
!! TATTCGTTTATTTATTCAAT+AGG - chr2_1:54099628-54099647 Msa0212180:intron 15.0%
!! AAAAATGTTACATTATAGTT+AGG + chr2_1:54100593-54100612 None:intergenic 15.0%
!!! CTTTAATATTGTTGTTATTT+AGG - chr2_1:54101116-54101135 Msa0212180:CDS 15.0%
!! GATGTTTATCAAAATATAAT+TGG - chr2_1:54101612-54101631 Msa0212180:intron 15.0%
!! ACTAAATTTATGGAATATTA+TGG - chr2_1:54101688-54101707 Msa0212180:intron 15.0%
!!! TTTTTTTTTGTTGTTTTTGT+GGG + chr2_1:54103544-54103563 None:intergenic 15.0%
!!! TTTTTTTTTTGTTGTTTTTG+TGG + chr2_1:54103545-54103564 None:intergenic 15.0%
!!! AATAATGTATTATTTGTTGA+AGG + chr2_1:54106374-54106393 None:intergenic 15.0%
!!! AAAAAACAAATTCATTGATT+TGG - chr2_1:54109350-54109369 Msa0212180:intron 15.0%
!!! TAATTAGTATTAGTTTCTTT+TGG - chr2_1:54111736-54111755 Msa0212180:intron 15.0%
!! ATTAAAAAAATGTCTGTTAT+TGG - chr2_1:54111921-54111940 Msa0212180:intron 15.0%
!! TTAAAAAAATGTCTGTTATT+GGG - chr2_1:54111922-54111941 Msa0212180:intron 15.0%
!!! TTTGCTTTATATTTAGAATA+TGG + chr2_1:54112156-54112175 None:intergenic 15.0%
!!! AAATATAAAGCAAAATTTTG+AGG - chr2_1:54112162-54112181 Msa0212180:five_prime_UTR 15.0%
!!! ATGCATTGTTTTTTTTTTTT+TGG + chr2_1:54112713-54112732 None:intergenic 15.0%
!! AATATTAATCTAACAACTAA+TGG + chr2_1:54112756-54112775 None:intergenic 15.0%
!! AAATGAGAAGCAAAATAAAA+GGG + chr2_1:54097778-54097797 None:intergenic 20.0%
!! TAAATGAGAAGCAAAATAAA+AGG + chr2_1:54097779-54097798 None:intergenic 20.0%
!! CCAATCTAAAAATAAATTAG+TGG + chr2_1:54098001-54098020 None:intergenic 20.0%
!!! CCACTAATTTATTTTTAGAT+TGG - chr2_1:54097998-54098017 Msa0212180:intron 20.0%
!!! CACTTTAGTTTTTTCAAAAA+CGG + chr2_1:54098081-54098100 None:intergenic 20.0%
!!! ATCATTTTAAACTTCCTATT+AGG - chr2_1:54098382-54098401 Msa0212180:intron 20.0%
!!! TCATTTTAAACTTCCTATTA+GGG - chr2_1:54098383-54098402 Msa0212180:intron 20.0%
!!! CTTGATTTTCAATGATAAAA+TGG + chr2_1:54098457-54098476 None:intergenic 20.0%
!!! CATTTTATCATTGAAAATCA+AGG - chr2_1:54098455-54098474 Msa0212180:intron 20.0%
!!! TTAAGTTGTTTTGATCAAAT+TGG - chr2_1:54098645-54098664 Msa0212180:intron 20.0%
!!! CATAAATTTTAACATCTAAC+AGG + chr2_1:54098825-54098844 None:intergenic 20.0%
!! CTTATTAACTTACTTTGATT+TGG - chr2_1:54100532-54100551 Msa0212180:intron 20.0%
!! TTATATTAGCAGTTAGAAAA+GGG + chr2_1:54100845-54100864 None:intergenic 20.0%
!!! TAACTGCTAATATAAGTTTT+TGG - chr2_1:54100850-54100869 Msa0212180:CDS 20.0%
!! ATAGAGAGATATAGTTATTT+AGG - chr2_1:54101198-54101217 Msa0212180:CDS 20.0%
!! TAGAGAGATATAGTTATTTA+GGG - chr2_1:54101199-54101218 Msa0212180:CDS 20.0%
!!! ATATAAAAGGTTTTTAGAGA+CGG - chr2_1:54101745-54101764 Msa0212180:intron 20.0%
!!! TACAAAATAGAGTTTTGTTT+AGG + chr2_1:54102193-54102212 None:intergenic 20.0%
!!! CTGAATTGAATATTTGTTTT+AGG - chr2_1:54102566-54102585 Msa0212180:intron 20.0%
!!! ATTTTAATTGTGAAGATTGA+AGG + chr2_1:54102705-54102724 None:intergenic 20.0%
!! TTAAAATCTTTCTTGAAGAA+AGG - chr2_1:54102718-54102737 Msa0212180:intron 20.0%
!!! TCTTATTTTGGCATATTTTA+TGG + chr2_1:54103391-54103410 None:intergenic 20.0%
!!! AGTATTTGGTATTCTTATTT+TGG + chr2_1:54103403-54103422 None:intergenic 20.0%
!! TAAAAAAGATGATATCGAAT+GGG - chr2_1:54105705-54105724 Msa0212180:intron 20.0%
!!! TGAAGTTTATTAATTTCTAG+AGG - chr2_1:54106098-54106117 Msa0212180:intron 20.0%
!!! TTGCAAGTTGTTATTTTTTA+GGG + chr2_1:54108660-54108679 None:intergenic 20.0%
!!! TACAAAATAGAGTTTTGTTT+AGG + chr2_1:54102193-54102212 None:intergenic 20.0%
!!! CTGAATTGAATATTTGTTTT+AGG - chr2_1:54102566-54102585 Msa0212180:intron 20.0%
!!! TTTTAATGACAGATATTAGT+AGG + chr2_1:54109333-54109352 None:intergenic 20.0%
!! TTCTTATACATTGCAAAAAA+AGG - chr2_1:54110036-54110055 Msa0212180:intron 20.0%
!!! AAAGCAACTATTAATTTTGA+TGG - chr2_1:54110120-54110139 Msa0212180:intron 20.0%
!!! TACATGTTATTTGAATCAAT+CGG + chr2_1:54110333-54110352 None:intergenic 20.0%
!! TGACAAATAACTTGAAAATT+TGG + chr2_1:54110369-54110388 None:intergenic 20.0%
!! ATTGTATATAGATTATCTTG+TGG + chr2_1:54110411-54110430 None:intergenic 20.0%
!! AGATAATCTATATACAATGA+AGG - chr2_1:54110413-54110432 Msa0212180:intron 20.0%
!! TTACATTCTTGTAAATTAGA+TGG + chr2_1:54110486-54110505 None:intergenic 20.0%
!! ATCTAATTTACAAGAATGTA+AGG - chr2_1:54110485-54110504 Msa0212180:intron 20.0%
!!! AAAGTTGATACTTATAGTTT+TGG - chr2_1:54111404-54111423 Msa0212180:intron 20.0%
!!! AATTTTTTGCTGAAGAAAAA+GGG - chr2_1:54111474-54111493 Msa0212180:intron 20.0%
!! CTAAGTTTGTAATATTTGTT+TGG + chr2_1:54111896-54111915 None:intergenic 20.0%
!!! GTTACACTATTCAATTTTTA+AGG + chr2_1:54112357-54112376 None:intergenic 20.0%
!!! CTAATTACAAGTAACATTTT+AGG + chr2_1:54112519-54112538 None:intergenic 20.0%
!! TAATATTTAATTCTTCGTGT+AGG - chr2_1:54112769-54112788 Msa0212180:five_prime_UTR 20.0%
!!! AGAATTTTTCAAGAAATAGT+TGG - chr2_1:54112857-54112876 Msa0212180:five_prime_UTR 20.0%
!!! AATAGTTGGCAAATTTTAAT+TGG - chr2_1:54112871-54112890 Msa0212180:five_prime_UTR 20.0%
!!! TTTTGGTTTTATTGTCTTTT+TGG + chr2_1:54113209-54113228 None:intergenic 20.0%
!!! ATAAAACCAAAAAGTATTTG+TGG - chr2_1:54113217-54113236 Msa0212180:five_prime_UTR 20.0%
!!! GAATTTAAACAAATGTTTTC+TGG + chr2_1:54113254-54113273 None:intergenic 20.0%
! TAAATTAGTGGTTATTGAAG+AGG + chr2_1:54097989-54098008 None:intergenic 25.0%
! AGGTTACATCAATATAAAGT+TGG - chr2_1:54098475-54098494 Msa0212180:intron 25.0%
! AAATTTGAATTTGCCATATC+TGG + chr2_1:54098556-54098575 None:intergenic 25.0%
!!! GGCAAATTCAAATTTTGAAA+TGG - chr2_1:54098561-54098580 Msa0212180:intron 25.0%
!! AGTTCATATTTAAGCTTTAG+AGG - chr2_1:54098723-54098742 Msa0212180:intron 25.0%
!! TTTATTACTGTTGTTTGTGT+TGG - chr2_1:54098863-54098882 Msa0212180:intron 25.0%
! AAAGTTATTATAGTCAATCG+GGG + chr2_1:54098917-54098936 None:intergenic 25.0%
! CAAAGTTATTATAGTCAATC+GGG + chr2_1:54098918-54098937 None:intergenic 25.0%
! CCAAAGTTATTATAGTCAAT+CGG + chr2_1:54098919-54098938 None:intergenic 25.0%
!!! TTAATCATTTAGGGGTATTT+TGG - chr2_1:54099040-54099059 Msa0212180:intron 25.0%
!!! TAATCATTTAGGGGTATTTT+GGG - chr2_1:54099041-54099060 Msa0212180:intron 25.0%
!! TTGTTTGTTTGTTAATTGCT+TGG - chr2_1:54099183-54099202 Msa0212180:intron 25.0%
!!! TGACATAAATAAGGTTTTGT+GGG + chr2_1:54099323-54099342 None:intergenic 25.0%
!!! TTGTTATGTGCATTTGTTTT+CGG - chr2_1:54099403-54099422 Msa0212180:intron 25.0%
! ATAGGAGTAGAAATTGAAAT+AGG - chr2_1:54099646-54099665 Msa0212180:intron 25.0%
! TAGTAAAAATTGAGTACACT+AGG - chr2_1:54099921-54099940 Msa0212180:intron 25.0%
!! AAATGATTTGTCCATTCAAT+TGG - chr2_1:54100001-54100020 Msa0212180:intron 25.0%
! TGGCTATAATGTTTGTTTAA+TGG - chr2_1:54100087-54100106 Msa0212180:intron 25.0%
! GTTTGTTTAATGGAAATAGA+TGG - chr2_1:54100097-54100116 Msa0212180:intron 25.0%
! TAATGGAAATAGATGGAATA+TGG - chr2_1:54100104-54100123 Msa0212180:intron 25.0%
! AATGGAAATAGATGGAATAT+GGG - chr2_1:54100105-54100124 Msa0212180:intron 25.0%
! TAAAAAAGCTTCAGACAAAT+AGG + chr2_1:54100175-54100194 None:intergenic 25.0%
! CCTTAATATAGTATAACCAT+AGG + chr2_1:54100225-54100244 None:intergenic 25.0%
! CCTATGGTTATACTATATTA+AGG - chr2_1:54100222-54100241 Msa0212180:intron 25.0%
!! GTAAAATTCTTGGCATATTT+TGG - chr2_1:54100265-54100284 Msa0212180:intron 25.0%
!! GTGCAGTTTAGATTTTTAAT+TGG - chr2_1:54100439-54100458 Msa0212180:CDS 25.0%
!! TATTTTCCCCAAAATTATTC+AGG - chr2_1:54100485-54100504 Msa0212180:intron 25.0%
! CAATCATCAAATCAAATACA+TGG + chr2_1:54100568-54100587 None:intergenic 25.0%
! TTAACATTAGACAAATCAAG+AGG + chr2_1:54100750-54100769 None:intergenic 25.0%
! CTTATATTAGCAGTTAGAAA+AGG + chr2_1:54100846-54100865 None:intergenic 25.0%
! CATTCTCCTTGTATTTATAT+TGG - chr2_1:54101023-54101042 Msa0212180:intron 25.0%
! TCTTCACCAATATAAATACA+AGG + chr2_1:54101032-54101051 None:intergenic 25.0%
! GTATTTATATTGGTGAAGAT+TGG - chr2_1:54101033-54101052 Msa0212180:intron 25.0%
! TCACATCATATAAAGCAAAT+AGG + chr2_1:54101087-54101106 None:intergenic 25.0%
!!! ATTTAGGTTGAAAGTTGAAA+TGG - chr2_1:54101132-54101151 Msa0212180:CDS 25.0%
! TTGAAAGTTGAAATGGAAAA+TGG - chr2_1:54101139-54101158 Msa0212180:CDS 25.0%
! GAAACAATTGTTACAAATAG+TGG - chr2_1:54101164-54101183 Msa0212180:CDS 25.0%
! AGAGAGATATAGTTATTTAG+GGG - chr2_1:54101200-54101219 Msa0212180:CDS 25.0%
!!! TGAAGTTGTGTATTTTGAAA+AGG + chr2_1:54101296-54101315 None:intergenic 25.0%
!!! CATGATATTTTTTTGTTCGT+AGG - chr2_1:54101314-54101333 Msa0212180:CDS 25.0%
! TTAAAAAGAGCTTCAATAGT+AGG - chr2_1:54101374-54101393 Msa0212180:intron 25.0%
! TAAAAAGAGCTTCAATAGTA+GGG - chr2_1:54101375-54101394 Msa0212180:intron 25.0%
!!! AGACGGATTTTATGATTTTT+GGG - chr2_1:54101810-54101829 Msa0212180:intron 25.0%
! GGAAATATATTTATCTGAGA+CGG - chr2_1:54101848-54101867 Msa0212180:intron 25.0%
! CTCTTCTTTCATTTAAACAT+TGG - chr2_1:54101902-54101921 Msa0212180:intron 25.0%
! GATTCACTACTAGAAAAATT+GGG + chr2_1:54102116-54102135 None:intergenic 25.0%
! TATCATCTTGATACATGTTT+AGG + chr2_1:54102138-54102157 None:intergenic 25.0%
! TGAAGAATTATTCAAGACAT+TGG + chr2_1:54102218-54102237 None:intergenic 25.0%
! AATGTCTTGAATAATTCTTC+AGG - chr2_1:54102217-54102236 Msa0212180:intron 25.0%
!! TTTTAATAAGCCTACTTTCT+AGG + chr2_1:54102351-54102370 None:intergenic 25.0%
!!! GACTTAGGAAAGTATTTTTA+AGG + chr2_1:54102378-54102397 None:intergenic 25.0%
! AGGAATTGTTAAAATGACTT+AGG + chr2_1:54102393-54102412 None:intergenic 25.0%
! AGAACATATGTGATTTCTTA+AGG + chr2_1:54102413-54102432 None:intergenic 25.0%
! ACAAATATTCAATTCAGATG+TGG + chr2_1:54102563-54102582 None:intergenic 25.0%
! ATTGTTGGATATTTGTATGT+TGG + chr2_1:54102603-54102622 None:intergenic 25.0%
! ATGACTGAAGAATTATATTG+TGG + chr2_1:54102771-54102790 None:intergenic 25.0%
!! ATATTTTATGGCTAAAAAGG+GGG + chr2_1:54103379-54103398 None:intergenic 25.0%
!! CATATTTTATGGCTAAAAAG+GGG + chr2_1:54103380-54103399 None:intergenic 25.0%
!! GCATATTTTATGGCTAAAAA+GGG + chr2_1:54103381-54103400 None:intergenic 25.0%
!! GACTGTTTTATCTAAGTATT+TGG + chr2_1:54103417-54103436 None:intergenic 25.0%
! GAATACTTTCTTCTTAATCT+TGG + chr2_1:54103474-54103493 None:intergenic 25.0%
!! ACTTTTCATCAGAAACTTTT+TGG + chr2_1:54103887-54103906 None:intergenic 25.0%
! AAGCATAATATTACAAAGCA+AGG - chr2_1:54103967-54103986 Msa0212180:intron 25.0%
! ATAATATTACAAAGCAAGGT+AGG - chr2_1:54103971-54103990 Msa0212180:intron 25.0%
! ACTAAAACAAAGATGGATAT+TGG + chr2_1:54104064-54104083 None:intergenic 25.0%
! GGTAAATTTATTTATGCCAT+AGG + chr2_1:54104088-54104107 None:intergenic 25.0%
! TAAAAGAAATGATGAAGAAG+CGG + chr2_1:54105001-54105020 None:intergenic 25.0%
!! TTCTTTAGTATTTTCAACAG+AGG - chr2_1:54105215-54105234 Msa0212180:intron 25.0%
! GAACATGAATTTAGATAAAC+CGG + chr2_1:54105262-54105281 None:intergenic 25.0%
!! GTTTTCTTCATAGATTTTGT+AGG - chr2_1:54105567-54105586 Msa0212180:intron 25.0%
! GTAAAAAAGATGATATCGAA+TGG - chr2_1:54105704-54105723 Msa0212180:intron 25.0%
! AAAAAAGATGATATCGAATG+GGG - chr2_1:54105706-54105725 Msa0212180:intron 25.0%
! AGGAAAATTGAAGATTGATT+TGG - chr2_1:54105735-54105754 Msa0212180:intron 25.0%
! TAAAAAAATAAAGGACAGAC+TGG + chr2_1:54105982-54106001 None:intergenic 25.0%
! AAACTTCAAAAGAATCTAAG+TGG + chr2_1:54106086-54106105 None:intergenic 25.0%
! TAGTTCTTATGAAAGGAAAA+AGG + chr2_1:54106253-54106272 None:intergenic 25.0%
! CAAGTAAATTCAATCACAAA+TGG + chr2_1:54106622-54106641 None:intergenic 25.0%
! CATTTGTGATTGAATTTACT+TGG - chr2_1:54106620-54106639 Msa0212180:intron 25.0%
! TAAGAAAAGAAGAACCTAAA+AGG + chr2_1:54106817-54106836 None:intergenic 25.0%
! ACATGTTTAAACTCTCAAAT+TGG + chr2_1:54107001-54107020 None:intergenic 25.0%
!! GTACTAACTTTTACAAGAAA+AGG + chr2_1:54107300-54107319 None:intergenic 25.0%
!! GTCAATTTTTCATTATTTCC+AGG - chr2_1:54107472-54107491 Msa0212180:intron 25.0%
! TGAAATCATCATCAACAATA+GGG + chr2_1:54107545-54107564 None:intergenic 25.0%
! TTGAAATCATCATCAACAAT+AGG + chr2_1:54107546-54107565 None:intergenic 25.0%
!! ATTCTGGAAATTACTTATGA+AGG + chr2_1:54107847-54107866 None:intergenic 25.0%
!!! TTTTGCTGTCAATAGATTTA+AGG - chr2_1:54108082-54108101 Msa0212180:intron 25.0%
!! TTGATTTGAGTCTGTAATTT+GGG + chr2_1:54108628-54108647 None:intergenic 25.0%
!!! TTTGATTTGAGTCTGTAATT+TGG + chr2_1:54108629-54108648 None:intergenic 25.0%
!!! GTTGCAAGTTGTTATTTTTT+AGG + chr2_1:54108661-54108680 None:intergenic 25.0%
! TGAAGAATTATTCAAGACAT+TGG + chr2_1:54102218-54102237 None:intergenic 25.0%
! AATGTCTTGAATAATTCTTC+AGG - chr2_1:54102217-54102236 Msa0212180:intron 25.0%
!! TTTTAATAAGCCTACTTTCT+AGG + chr2_1:54102351-54102370 None:intergenic 25.0%
!!! GACTTAGGAAAGTATTTTTA+AGG + chr2_1:54102378-54102397 None:intergenic 25.0%
! AGGAATTGTTAAAATGACTT+AGG + chr2_1:54102393-54102412 None:intergenic 25.0%
! AGAACATATGTGATTTCTTA+AGG + chr2_1:54102413-54102432 None:intergenic 25.0%
! ACAAATATTCAATTCAGATG+TGG + chr2_1:54102563-54102582 None:intergenic 25.0%
!!! TATTCACAAGTTGATTTTGT+TGG + chr2_1:54109263-54109282 None:intergenic 25.0%
!!! TTCATTGATTTGGACATAAA+CGG - chr2_1:54109360-54109379 Msa0212180:intron 25.0%
! TTGATATTAAATGATTCTCG+TGG - chr2_1:54109619-54109638 Msa0212180:intron 25.0%
! AATTGCTTGGCAAATTTATA+AGG + chr2_1:54109921-54109940 None:intergenic 25.0%
! TTATACATTGCAAAAAAAGG+AGG - chr2_1:54110039-54110058 Msa0212180:intron 25.0%
! TATACATTGCAAAAAAAGGA+GGG - chr2_1:54110040-54110059 Msa0212180:intron 25.0%
! AGGATTTACCAAATATTGAT+TGG - chr2_1:54110433-54110452 Msa0212180:intron 25.0%
! ATAGATTCATAATCAGAATC+AGG + chr2_1:54110459-54110478 None:intergenic 25.0%
!! ATTGTGATTTCAGTTCTTTT+GGG - chr2_1:54110696-54110715 Msa0212180:intron 25.0%
!!! TTTGTCATTTTAACTTTGCT+TGG - chr2_1:54110729-54110748 Msa0212180:intron 25.0%
!!! TTTTAGCTTTAAGGAAATTG+TGG - chr2_1:54110839-54110858 Msa0212180:intron 25.0%
!! CATAACTTTAGAGAAGAATT+GGG - chr2_1:54110870-54110889 Msa0212180:intron 25.0%
! GTATATGAGTTAATGAGTAA+TGG - chr2_1:54111086-54111105 Msa0212180:intron 25.0%
! TATATCACAATGGATGATTT+GGG + chr2_1:54111222-54111241 None:intergenic 25.0%
! TTATATCACAATGGATGATT+TGG + chr2_1:54111223-54111242 None:intergenic 25.0%
!!! TCATCTAGAAGTATATTTTG+TGG + chr2_1:54111248-54111267 None:intergenic 25.0%
!! AATGCAAGAATTTCAGATTT+TGG - chr2_1:54111275-54111294 Msa0212180:intron 25.0%
! ACTATAAGTATCAACTTTAG+CGG + chr2_1:54111402-54111421 None:intergenic 25.0%
!!! GAATTTTTTGCTGAAGAAAA+AGG - chr2_1:54111473-54111492 Msa0212180:intron 25.0%
!!! AAAAAGGGATTTTAACTGAT+TGG - chr2_1:54111489-54111508 Msa0212180:intron 25.0%
!!! AAAAGGGATTTTAACTGATT+GGG - chr2_1:54111490-54111509 Msa0212180:intron 25.0%
!!! TTAGTATTAGTTTCTTTTGG+TGG - chr2_1:54111739-54111758 Msa0212180:intron 25.0%
!!! TAGTATTAGTTTCTTTTGGT+GGG - chr2_1:54111740-54111759 Msa0212180:intron 25.0%
!!! GTGGGATTTTAACATTAAAT+TGG - chr2_1:54111758-54111777 Msa0212180:intron 25.0%
! CAAATGAGAAGTTTAATGTA+TGG - chr2_1:54111794-54111813 Msa0212180:intron 25.0%
! TTTGTTACAACTCAAAAGAT+AGG + chr2_1:54111990-54112009 None:intergenic 25.0%
! GAAATTAAACGTAGACATAA+TGG - chr2_1:54112216-54112235 Msa0212180:five_prime_UTR 25.0%
! TTTCAAAAGACATTTGCAAA+GGG + chr2_1:54112442-54112461 None:intergenic 25.0%
! AAAATACCTTAAATCCCTAA+CGG + chr2_1:54112564-54112583 None:intergenic 25.0%
! TGAAAATACAAGTTACACAT+AGG + chr2_1:54112643-54112662 None:intergenic 25.0%
! AACCTTCAACTATTTATTCT+TGG - chr2_1:54112803-54112822 Msa0212180:five_prime_UTR 25.0%
! TTCCAAGAATAAATAGTTGA+AGG + chr2_1:54112808-54112827 None:intergenic 25.0%
!!! TTTATTGTCTTTTTGGAAAG+TGG + chr2_1:54113202-54113221 None:intergenic 25.0%
AGAGAGTGATAACAATTGAT+GGG + chr2_1:54097835-54097854 None:intergenic 30.0%
AAGAGAGTGATAACAATTGA+TGG + chr2_1:54097836-54097855 None:intergenic 30.0%
!!! TTTTTTCAAAAACGGTCTCA+TGG + chr2_1:54098073-54098092 None:intergenic 30.0%
AAGAAATAATTTGAGGGGTT+TGG + chr2_1:54098132-54098151 None:intergenic 30.0%
CGATCAAGAAATAATTTGAG+GGG + chr2_1:54098137-54098156 None:intergenic 30.0%
CCGATCAAGAAATAATTTGA+GGG + chr2_1:54098138-54098157 None:intergenic 30.0%
! CCCTCAAATTATTTCTTGAT+CGG - chr2_1:54098135-54098154 Msa0212180:intron 30.0%
TCCGATCAAGAAATAATTTG+AGG + chr2_1:54098139-54098158 None:intergenic 30.0%
ATATGAAACTCACCAAAAGA+AGG + chr2_1:54098264-54098283 None:intergenic 30.0%
TTAGTCTATTATATCCACCA+AGG + chr2_1:54098409-54098428 None:intergenic 30.0%
GTTGTTAAGAAATGTTGATG+AGG - chr2_1:54098517-54098536 Msa0212180:intron 30.0%
! AATGTTGATGAGGTTTAGAT+TGG - chr2_1:54098527-54098546 Msa0212180:intron 30.0%
TTCTAATATGCAAGGAAAAG+AGG + chr2_1:54098776-54098795 None:intergenic 30.0%
! GGGTGAATTGATTTAAAAGA+CGG + chr2_1:54098804-54098823 None:intergenic 30.0%
CAGTAATAAAATCACATCAG+AGG + chr2_1:54098853-54098872 None:intergenic 30.0%
CCGATTGACTATAATAACTT+TGG - chr2_1:54098916-54098935 Msa0212180:intron 30.0%
! GAGAATTCGGTAAAGTATTA+AGG - chr2_1:54099007-54099026 Msa0212180:intron 30.0%
! AATTCGGTAAAGTATTAAGG+TGG - chr2_1:54099010-54099029 Msa0212180:intron 30.0%
! ATTCGGTAAAGTATTAAGGT+GGG - chr2_1:54099011-54099030 Msa0212180:intron 30.0%
!!! TCGTATTGATTTCACAGTTT+TGG - chr2_1:54099244-54099263 Msa0212180:intron 30.0%
! GTGACATAAATAAGGTTTTG+TGG + chr2_1:54099324-54099343 None:intergenic 30.0%
CTAACTACGTGACATAAATA+AGG + chr2_1:54099332-54099351 None:intergenic 30.0%
CTTATTTATGTCACGTAGTT+AGG - chr2_1:54099330-54099349 Msa0212180:intron 30.0%
TTAACTCATTCCAATCCTTT+CGG + chr2_1:54099437-54099456 None:intergenic 30.0%
AAAGGATTGGAATGAGTTAA+AGG - chr2_1:54099437-54099456 Msa0212180:intron 30.0%
!!! AGTCGAGATGTTTTGAAATA+AGG - chr2_1:54099486-54099505 Msa0212180:intron 30.0%
AAATTGAAATAGGAGGCAAA+GGG - chr2_1:54099656-54099675 Msa0212180:intron 30.0%
AAGAAAAAGTTAGGTTTGAC+TGG - chr2_1:54099696-54099715 Msa0212180:intron 30.0%
AGAAAAAGTTAGGTTTGACT+GGG - chr2_1:54099697-54099716 Msa0212180:intron 30.0%
GTACATCAATACCAATTGAA+TGG + chr2_1:54100015-54100034 None:intergenic 30.0%
! TTTTTACCTCATGTTTGTCA+TGG - chr2_1:54100189-54100208 Msa0212180:intron 30.0%
TAATTGGAAATTGAAACTCG+TGG - chr2_1:54100455-54100474 Msa0212180:CDS 30.0%
! TCAGTCACCTGAATAATTTT+GGG + chr2_1:54100495-54100514 None:intergenic 30.0%
ATCCAAGTTTCAATTCCATA+AGG + chr2_1:54100637-54100656 None:intergenic 30.0%
! ATTGAAACTTGGATTAGAGA+TGG - chr2_1:54100643-54100662 Msa0212180:intron 30.0%
GATTTGTCTAATGTTAAAGC+TGG - chr2_1:54100753-54100772 Msa0212180:intron 30.0%
! AACTCTCAAGTTCAGAATTT+TGG - chr2_1:54100808-54100827 Msa0212180:CDS 30.0%
GATTGTTATGACTCTTAAAG+TGG - chr2_1:54100872-54100891 Msa0212180:CDS 30.0%
GTAAGCAAGATAAGGATTTA+TGG + chr2_1:54100909-54100928 None:intergenic 30.0%
GAGTAATAGTAAGCAAGATA+AGG + chr2_1:54100917-54100936 None:intergenic 30.0%
TCTTGCTTACTATTACTCTA+AGG - chr2_1:54100919-54100938 Msa0212180:CDS 30.0%
CTTGCTTACTATTACTCTAA+GGG - chr2_1:54100920-54100939 Msa0212180:CDS 30.0%
! TTACTCTAAGGGATTTAATG+TGG - chr2_1:54100931-54100950 Msa0212180:CDS 30.0%
ATTTAATGTGGCAGAAATTG+TGG - chr2_1:54100943-54100962 Msa0212180:CDS 30.0%
! GAAGCTTCATATTGTTACTT+AGG - chr2_1:54101255-54101274 Msa0212180:CDS 30.0%
AAAAAGAGCTTCAATAGTAG+GGG - chr2_1:54101376-54101395 Msa0212180:intron 30.0%
AGATAGATGTATACAACCTT+TGG - chr2_1:54101433-54101452 Msa0212180:CDS 30.0%
GGAATTTCATTGAATAGAGA+CGG - chr2_1:54101793-54101812 Msa0212180:intron 30.0%
!! GAGACGGATTTTATGATTTT+TGG - chr2_1:54101809-54101828 Msa0212180:intron 30.0%
! AATATATTTATCTGAGACGG+TGG - chr2_1:54101851-54101870 Msa0212180:intron 30.0%
TTTCATTTAAACATTGGCGA+CGG - chr2_1:54101908-54101927 Msa0212180:intron 30.0%
AATCTAAATTCCGTCTCTAA+AGG - chr2_1:54101978-54101997 Msa0212180:intron 30.0%
!!! GATTTTTCCTGTTTTAGAGA+CGG - chr2_1:54102072-54102091 Msa0212180:intron 30.0%
AGAAAAATTGGGAATAGAGA+CGG + chr2_1:54102105-54102124 None:intergenic 30.0%
GGATTCACTACTAGAAAAAT+TGG + chr2_1:54102117-54102136 None:intergenic 30.0%
! GACTTATTGATTAAGCAACA+TGG - chr2_1:54102310-54102329 Msa0212180:intron 30.0%
! TATTGATTAAGCAACATGGA+CGG - chr2_1:54102314-54102333 Msa0212180:intron 30.0%
TTAGCCAAAAATTTGCCAAA+GGG + chr2_1:54102630-54102649 None:intergenic 30.0%
TTTAGCCAAAAATTTGCCAA+AGG + chr2_1:54102631-54102650 None:intergenic 30.0%
AATTGTGAAGATTGAAGGAA+AGG + chr2_1:54102700-54102719 None:intergenic 30.0%
! GACTAGAAGAAGTATATTAC+AGG - chr2_1:54102807-54102826 Msa0212180:intron 30.0%
TGATGGTTGTGTGAAAATAT+TGG + chr2_1:54102848-54102867 None:intergenic 30.0%
TGCATAATTCCATATGTTGA+TGG + chr2_1:54102865-54102884 None:intergenic 30.0%
TATCTGTTTGTACTCTTTGA+GGG + chr2_1:54103098-54103117 None:intergenic 30.0%
ATATCTGTTTGTACTCTTTG+AGG + chr2_1:54103099-54103118 None:intergenic 30.0%
TCTGGTATTCTAGTACTATA+AGG + chr2_1:54103208-54103227 None:intergenic 30.0%
AATACTTAAACACCAGATCA+AGG - chr2_1:54103263-54103282 Msa0212180:intron 30.0%
ATACTTAAACACCAGATCAA+GGG - chr2_1:54103264-54103283 Msa0212180:intron 30.0%
! TGTATGATTCTAGTTGTCTT+AGG + chr2_1:54103350-54103369 None:intergenic 30.0%
! GGCATATTTTATGGCTAAAA+AGG + chr2_1:54103382-54103401 None:intergenic 30.0%
TCTTATATTCTGAACATCTC+TGG + chr2_1:54103448-54103467 None:intergenic 30.0%
TTTGAACACCTTATGTGTTA+TGG + chr2_1:54103506-54103525 None:intergenic 30.0%
! TAAGGTGTTCAAAATATCCA+AGG - chr2_1:54103513-54103532 Msa0212180:intron 30.0%
TAGTACAGGTATTATGACAA+AGG + chr2_1:54103819-54103838 None:intergenic 30.0%
TTTGTCATAATACCTGTACT+AGG - chr2_1:54103818-54103837 Msa0212180:intron 30.0%
AGTTTCTGATGAAAAGTAAG+AGG - chr2_1:54103890-54103909 Msa0212180:intron 30.0%
CATAGGAACTAAAACAAAGA+TGG + chr2_1:54104071-54104090 None:intergenic 30.0%
!!! CATCTTTGTTTTAGTTCCTA+TGG - chr2_1:54104069-54104088 Msa0212180:intron 30.0%
AACATCATCAATAGCTTTCT+AGG + chr2_1:54104310-54104329 None:intergenic 30.0%
!! TAGAAAGCTATTGATGATGT+TGG - chr2_1:54104309-54104328 Msa0212180:intron 30.0%
!! AGAAAGCTATTGATGATGTT+GGG - chr2_1:54104310-54104329 Msa0212180:intron 30.0%
! TATCAAAAGGTATACGTTAG+AGG + chr2_1:54104355-54104374 None:intergenic 30.0%
TCTCAGGAAAGATTATCAAA+AGG + chr2_1:54104368-54104387 None:intergenic 30.0%
!! TTTTGATAATCTTTCCTGAG+AGG - chr2_1:54104367-54104386 Msa0212180:intron 30.0%
!! GTTTCTAGTAAATATTCCCA+AGG + chr2_1:54104404-54104423 None:intergenic 30.0%
GGTGGAAATTTATTTACCAT+AGG + chr2_1:54104558-54104577 None:intergenic 30.0%
ATCTGAGTATGATGTTAAGA+AGG + chr2_1:54104695-54104714 None:intergenic 30.0%
! ACTTTACTCCAACTTTTCTT+TGG - chr2_1:54104772-54104791 Msa0212180:intron 30.0%
! CTTTACTCCAACTTTTCTTT+GGG - chr2_1:54104773-54104792 Msa0212180:intron 30.0%
ACTAAGAAGTAACAAAGGTA+AGG + chr2_1:54104887-54104906 None:intergenic 30.0%
AAGAGACTAAGAAGTAACAA+AGG + chr2_1:54104892-54104911 None:intergenic 30.0%
! TTTGTTACTTCTTAGTCTCT+TGG - chr2_1:54104891-54104910 Msa0212180:intron 30.0%
! AGATGTTGATAAACTCAATC+TGG + chr2_1:54104956-54104975 None:intergenic 30.0%
TACTTTCTATAGCATCATTC+AGG - chr2_1:54105286-54105305 Msa0212180:intron 30.0%
CTGTATCTGATAGAAAACTA+GGG + chr2_1:54105320-54105339 None:intergenic 30.0%
TTTCATTTCAGAAGAAACAG+AGG - chr2_1:54105656-54105675 Msa0212180:intron 30.0%
CTTCGTCATGAAATTCAAAA+AGG + chr2_1:54105685-54105704 None:intergenic 30.0%
TGATATGTGTGATATGATTG+CGG - chr2_1:54105824-54105843 Msa0212180:intron 30.0%
TTATTAGTGCACGCATATTT+AGG + chr2_1:54105885-54105904 None:intergenic 30.0%
TGATGAATTTGAAGAGTTGT+TGG + chr2_1:54106018-54106037 None:intergenic 30.0%
TCACTTACTATTCCTTCTAT+AGG - chr2_1:54106035-54106054 Msa0212180:intron 30.0%
CACTTACTATTCCTTCTATA+GGG - chr2_1:54106036-54106055 Msa0212180:intron 30.0%
TGAAACATCAGAAAGATCAA+AGG + chr2_1:54106169-54106188 None:intergenic 30.0%
AGTCAACATCAAAAGAAGTT+TGG + chr2_1:54106553-54106572 None:intergenic 30.0%
TGTCATCATTGTAAGAGAAA+AGG + chr2_1:54106683-54106702 None:intergenic 30.0%
TACAATGATGACAAATCCAA+AGG - chr2_1:54106690-54106709 Msa0212180:intron 30.0%
AACAACATCTGTATGAGAAA+AGG + chr2_1:54106724-54106743 None:intergenic 30.0%
! GTAACCTTATTATGCCTTTT+AGG - chr2_1:54106800-54106819 Msa0212180:intron 30.0%
! AGAACCTAAAAGGCATAATA+AGG + chr2_1:54106807-54106826 None:intergenic 30.0%
CAAAAAAATTGCATATGCTG+TGG + chr2_1:54106855-54106874 None:intergenic 30.0%
TTTCTGAATAATGTTGCAGA+AGG + chr2_1:54106944-54106963 None:intergenic 30.0%
TAAAAATGCTCTTCTGACAA+AGG + chr2_1:54107047-54107066 None:intergenic 30.0%
ACTGAAATCTGTAAGATGTT+AGG + chr2_1:54107106-54107125 None:intergenic 30.0%
TGATCTAGTTACTGCATATA+AGG + chr2_1:54107146-54107165 None:intergenic 30.0%
GTGTCTGAAAGATTAAATGA+AGG + chr2_1:54107250-54107269 None:intergenic 30.0%
AGAAAAGGTTCAATAATGCT+TGG + chr2_1:54107285-54107304 None:intergenic 30.0%
GTTCAACAAAATTGTGAGTT+TGG + chr2_1:54107425-54107444 None:intergenic 30.0%
! TTTTGTTGAACAGTTTTCCT+AGG - chr2_1:54107434-54107453 Msa0212180:intron 30.0%
! ACTTTCATGTCGAATCTTTT+AGG - chr2_1:54107637-54107656 Msa0212180:intron 30.0%
AACTGATCAGAAAAATTCTC+AGG + chr2_1:54107669-54107688 None:intergenic 30.0%
! TAATGCTTTTGATACTCTTG+GGG + chr2_1:54107710-54107729 None:intergenic 30.0%
! CTAATGCTTTTGATACTCTT+GGG + chr2_1:54107711-54107730 None:intergenic 30.0%
GAATGTTCATGTAGAATTCT+TGG - chr2_1:54107740-54107759 Msa0212180:intron 30.0%
!!! AATCTAGATTTTTTCACTCC+TGG - chr2_1:54107817-54107836 Msa0212180:intron 30.0%
!!! ATCTAGATTTTTTCACTCCT+GGG - chr2_1:54107818-54107837 Msa0212180:intron 30.0%
ACAATGCAATATTGCTCAAA+AGG + chr2_1:54107878-54107897 None:intergenic 30.0%
!! TTCTGAAATCAGAAGAAGAT+TGG + chr2_1:54107993-54108012 None:intergenic 30.0%
GAAAGCAATGTTAAAAGGTT+GGG + chr2_1:54108058-54108077 None:intergenic 30.0%
ACTTGGAAAGCAATGTTAAA+AGG + chr2_1:54108063-54108082 None:intergenic 30.0%
AATCTATTGACAGCAAAACT+TGG + chr2_1:54108080-54108099 None:intergenic 30.0%
ACTATGATTACTGGAAATCT+CGG + chr2_1:54108119-54108138 None:intergenic 30.0%
AGATTTCCAGTAATCATAGT+TGG - chr2_1:54108119-54108138 Msa0212180:intron 30.0%
!!! TCTGATGCCAATTGTTATTT+TGG - chr2_1:54108245-54108264 Msa0212180:intron 30.0%
TAACGTGCCAAAATAACAAT+TGG + chr2_1:54108255-54108274 None:intergenic 30.0%
TAACAGACATGAAAGAAAAG+AGG - chr2_1:54108381-54108400 Msa0212180:intron 30.0%
TTACAGACTCAAATCAAATG+AGG - chr2_1:54108631-54108650 Msa0212180:intron 30.0%
! GACTTATTGATTAAGCAACA+TGG - chr2_1:54102310-54102329 Msa0212180:intron 30.0%
ATAAGATCAATTCGTTCAGT+TGG - chr2_1:54109282-54109301 Msa0212180:intron 30.0%
ATTAAATGATTCTCGTGGTT+TGG - chr2_1:54109624-54109643 Msa0212180:intron 30.0%
ACATCAGGTACAATTTCTAA+TGG - chr2_1:54109691-54109710 Msa0212180:intron 30.0%
AATGGTCTAATGAATGATGA+TGG - chr2_1:54109709-54109728 Msa0212180:intron 30.0%
! ATTAGTACCGAATCAAGTAA+TGG - chr2_1:54109798-54109817 Msa0212180:intron 30.0%
TTCAACACCATTACTTGATT+CGG + chr2_1:54109808-54109827 None:intergenic 30.0%
! AATCAAGTAATGGTGTTGAA+TGG - chr2_1:54109808-54109827 Msa0212180:intron 30.0%
GTTTAAACTTCATCTACAAG+AGG - chr2_1:54109876-54109895 Msa0212180:intron 30.0%
ATTCTTAGAATCACCACTAA+TGG + chr2_1:54109974-54109993 None:intergenic 30.0%
TCTAAGAATCAAACAAACGT+TGG - chr2_1:54109985-54110004 Msa0212180:intron 30.0%
ATACATTGCAAAAAAAGGAG+GGG - chr2_1:54110041-54110060 Msa0212180:intron 30.0%
! TTTTCTATCAGCAATCCAAA+TGG - chr2_1:54110069-54110088 Msa0212180:intron 30.0%
TTTCTATCAGCAATCCAAAT+GGG - chr2_1:54110070-54110089 Msa0212180:intron 30.0%
!! ATCTTTAGGGTAAAATGCAA+TGG + chr2_1:54110154-54110173 None:intergenic 30.0%
! GAATGCAAACATATGTTTTC+TGG + chr2_1:54110216-54110235 None:intergenic 30.0%
GATTCAAATAACATGTATGC+TGG - chr2_1:54110336-54110355 Msa0212180:intron 30.0%
!! TTTCAAGTTATTTGTCAAGC+AGG - chr2_1:54110372-54110391 Msa0212180:CDS 30.0%
!!! GTTTTGGTTCATTTTGATGA+AGG - chr2_1:54110534-54110553 Msa0212180:intron 30.0%
TCATTTACACCATAAGATAG+TGG + chr2_1:54110582-54110601 None:intergenic 30.0%
ATCTTATGGTGTAAATGATC+CGG - chr2_1:54110584-54110603 Msa0212180:intron 30.0%
GAAGAAAGATCATGATACTT+TGG - chr2_1:54110671-54110690 Msa0212180:intron 30.0%
! CATTGTGATTTCAGTTCTTT+TGG - chr2_1:54110695-54110714 Msa0212180:intron 30.0%
!!! TTGCTTGGTGCAATATTTTT+TGG - chr2_1:54110744-54110763 Msa0212180:intron 30.0%
!!! TGCTTGGTGCAATATTTTTT+GGG - chr2_1:54110745-54110764 Msa0212180:intron 30.0%
!! TACTACTTTTGATCTTCTTG+AGG + chr2_1:54110782-54110801 None:intergenic 30.0%
! ATTGTCAACAACACTTTTGT+TGG + chr2_1:54110808-54110827 None:intergenic 30.0%
! GCATAACTTTAGAGAAGAAT+TGG - chr2_1:54110869-54110888 Msa0212180:intron 30.0%
AATAGAGATGATGATCAATG+TGG - chr2_1:54110926-54110945 Msa0212180:intron 30.0%
TAAATTCCTTATCACTATCC+TGG + chr2_1:54110977-54110996 None:intergenic 30.0%
!! TTTGTGGCTTTATATCACAA+TGG + chr2_1:54111232-54111251 None:intergenic 30.0%
!! TGTTAGAGATCATTTGTTGT+AGG - chr2_1:54111435-54111454 Msa0212180:intron 30.0%
AGTTTGTCATGATAGCTATT+TGG - chr2_1:54111597-54111616 Msa0212180:intron 30.0%
CTTACAGAACCAAATAGATA+GGG + chr2_1:54111713-54111732 None:intergenic 30.0%
ACTTACAGAACCAAATAGAT+AGG + chr2_1:54111714-54111733 None:intergenic 30.0%
TACAGTAGAAAGCAAAACAT+AGG + chr2_1:54111843-54111862 None:intergenic 30.0%
!! GCAAATGAAAATGTCACTTT+AGG + chr2_1:54112100-54112119 None:intergenic 30.0%
! ATGTCTACGTTTAATTTCCT+AGG + chr2_1:54112214-54112233 None:intergenic 30.0%
TGGATGTATGACCTTTAATA+AGG - chr2_1:54112236-54112255 Msa0212180:five_prime_UTR 30.0%
GGATGTATGACCTTTAATAA+GGG - chr2_1:54112237-54112256 Msa0212180:five_prime_UTR 30.0%
GATGTATGACCTTTAATAAG+GGG - chr2_1:54112238-54112257 Msa0212180:five_prime_UTR 30.0%
!! AAAGTATTGATGATATACGG+TGG + chr2_1:54112417-54112436 None:intergenic 30.0%
ACCGTATATCATCAATACTT+TGG - chr2_1:54112416-54112435 Msa0212180:five_prime_UTR 30.0%
!! GCCAAAGTATTGATGATATA+CGG + chr2_1:54112420-54112439 None:intergenic 30.0%
CTTTCAAAAGACATTTGCAA+AGG + chr2_1:54112443-54112462 None:intergenic 30.0%
!! AAATGTCTTTTGAAAGACCA+AGG - chr2_1:54112447-54112466 Msa0212180:five_prime_UTR 30.0%
!! AATGTCTTTTGAAAGACCAA+GGG - chr2_1:54112448-54112467 Msa0212180:five_prime_UTR 30.0%
!!! GTTTTGTTGTTAAATACCCT+TGG + chr2_1:54112467-54112486 None:intergenic 30.0%
! AGGGTATTTAACAACAAAAC+CGG - chr2_1:54112467-54112486 Msa0212180:five_prime_UTR 30.0%
TTCATTCATTACTGATACTC+CGG + chr2_1:54112489-54112508 None:intergenic 30.0%
AAATACCTTAAATCCCTAAC+GGG + chr2_1:54112563-54112582 None:intergenic 30.0%
TATAGCTATCCTTACGATTA+TGG - chr2_1:54113127-54113146 Msa0212180:five_prime_UTR 30.0%
ATAGCTATCCTTACGATTAT+GGG - chr2_1:54113128-54113147 Msa0212180:five_prime_UTR 30.0%
! TCTTTGCCACAAATACTTTT+TGG + chr2_1:54113226-54113245 None:intergenic 30.0%
!!! AAGCGTATGTGTGTTGTTTT+GGG + chr2_1:54097860-54097879 None:intergenic 35.0%
ATTAGTGGTTATTGAAGAGG+AGG + chr2_1:54097986-54098005 None:intergenic 35.0%
! TTCACATCCTTTCCTTCTTT+TGG - chr2_1:54098249-54098268 Msa0212180:intron 35.0%
AAACTCACCAAAAGAAGGAA+AGG + chr2_1:54098259-54098278 None:intergenic 35.0%
TTTAGATTGGACACCAGATA+TGG - chr2_1:54098540-54098559 Msa0212180:intron 35.0%
! GACTATAATAACTTTGGCTC+CGG - chr2_1:54098922-54098941 Msa0212180:intron 35.0%
! ACTATAATAACTTTGGCTCC+GGG - chr2_1:54098923-54098942 Msa0212180:intron 35.0%
! TTCGGTAAAGTATTAAGGTG+GGG - chr2_1:54099012-54099031 Msa0212180:intron 35.0%
CACAAGAACCATTAACCATT+TGG - chr2_1:54099273-54099292 Msa0212180:intron 35.0%
GGAAACCTTATTCATGAAAG+CGG + chr2_1:54099302-54099321 None:intergenic 35.0%
TTGTGTCGTCTAAGTCATTT+AGG - chr2_1:54099374-54099393 Msa0212180:intron 35.0%
GATTGGAATGAGTTAAAGGT+CGG - chr2_1:54099441-54099460 Msa0212180:intron 35.0%
GGAGTAGAAATTGAAATAGG+AGG - chr2_1:54099649-54099668 Msa0212180:intron 35.0%
GAAATTGAAATAGGAGGCAA+AGG - chr2_1:54099655-54099674 Msa0212180:intron 35.0%
AATTGAAATAGGAGGCAAAG+GGG - chr2_1:54099657-54099676 Msa0212180:intron 35.0%
AGAGGAGGAAAGAAAAAGTT+AGG - chr2_1:54099687-54099706 Msa0212180:intron 35.0%
GAAAAAGTTAGGTTTGACTG+GGG - chr2_1:54099698-54099717 Msa0212180:intron 35.0%
TACCATTTCATCTTCAACCA+TGG - chr2_1:54099761-54099780 Msa0212180:intron 35.0%
ACCATTTCATCTTCAACCAT+GGG - chr2_1:54099762-54099781 Msa0212180:intron 35.0%
ACCAGAGTAGTATCACATAT+TGG - chr2_1:54099794-54099813 Msa0212180:intron 35.0%
ACCAATATGTGATACTACTC+TGG + chr2_1:54099798-54099817 None:intergenic 35.0%
GTAGTATCACATATTGGTGT+AGG - chr2_1:54099800-54099819 Msa0212180:intron 35.0%
TTGAGTACACTAGGAGAAAT+AGG - chr2_1:54099930-54099949 Msa0212180:intron 35.0%
!!! ACACGTTGCATTTTTTGCTT+TGG - chr2_1:54100033-54100052 Msa0212180:intron 35.0%
!!! CACGTTGCATTTTTTGCTTT+GGG - chr2_1:54100034-54100053 Msa0212180:intron 35.0%
ACAAACATTATAGCCATTGC+TGG + chr2_1:54100083-54100102 None:intergenic 35.0%
CAATTACCATGACAAACATG+AGG + chr2_1:54100198-54100217 None:intergenic 35.0%
TCATGGTAATTGAGTTCCTA+TGG - chr2_1:54100206-54100225 Msa0212180:intron 35.0%
! ATGCCAAGAATTTTACAGAC+TGG + chr2_1:54100261-54100280 None:intergenic 35.0%
!! CAGAATGTTCTAGCTTAGTT+TGG - chr2_1:54100288-54100307 Msa0212180:intron 35.0%
! CAGTCACCTGAATAATTTTG+GGG + chr2_1:54100494-54100513 None:intergenic 35.0%
! CTCAGTCACCTGAATAATTT+TGG + chr2_1:54100496-54100515 None:intergenic 35.0%
AGGCAAAATCTGTTAGCATA+AGG + chr2_1:54100617-54100636 None:intergenic 35.0%
! TGCTAACAGATTTTGCCTTA+TGG - chr2_1:54100619-54100638 Msa0212180:intron 35.0%
TGCCTTATGGAATTGAAACT+TGG - chr2_1:54100632-54100651 Msa0212180:intron 35.0%
GAAGTGAGAAGAATGAGTAT+TGG + chr2_1:54100724-54100743 None:intergenic 35.0%
CATTAGACAAATCAAGAGGA+AGG + chr2_1:54100746-54100765 None:intergenic 35.0%
TTGTCTAATGTTAAAGCTGG+TGG - chr2_1:54100756-54100775 Msa0212180:intron 35.0%
!! AATGTTAAAGCTGGTGGATT+TGG - chr2_1:54100762-54100781 Msa0212180:intron 35.0%
TTCTGAACTTGAGAGTTTAG+AGG + chr2_1:54100805-54100824 None:intergenic 35.0%
AAAAGAGCTTCAATAGTAGG+GGG - chr2_1:54101377-54101396 Msa0212180:intron 35.0%
ATTAAAAGTTGCTGCTATGG+AGG - chr2_1:54101457-54101476 Msa0212180:CDS 35.0%
TCAATGAAATTCCGTCTCTA+CGG + chr2_1:54101786-54101805 None:intergenic 35.0%
!! TGGCGACGGATTATATATAT+CGG - chr2_1:54101922-54101941 Msa0212180:intron 35.0%
CGGATTATATATATCGGTGA+CGG - chr2_1:54101928-54101947 Msa0212180:intron 35.0%
GAAAAATTGGGAATAGAGAC+GGG + chr2_1:54102104-54102123 None:intergenic 35.0%
GTATCAAGATGATACACGAA+AGG - chr2_1:54102144-54102163 Msa0212180:intron 35.0%
CTTGCTTCAGTATATAAAGG+AGG + chr2_1:54102251-54102270 None:intergenic 35.0%
CTCCTTTATATACTGAAGCA+AGG - chr2_1:54102249-54102268 Msa0212180:intron 35.0%
TATGGAAACTCCTAGAAAGT+AGG - chr2_1:54102338-54102357 Msa0212180:intron 35.0%
TAGCCAAAAATTTGCCAAAG+GGG + chr2_1:54102629-54102648 None:intergenic 35.0%
TTCACACAACCATCAACATA+TGG - chr2_1:54102853-54102872 Msa0212180:intron 35.0%
! ACTGTCTGTTTAGGATGTAT+AGG + chr2_1:54102963-54102982 None:intergenic 35.0%
AACATCCACAAGAACATTCA+GGG - chr2_1:54103055-54103074 Msa0212180:intron 35.0%
ATCTGTTTGTACTCTTTGAG+GGG + chr2_1:54103097-54103116 None:intergenic 35.0%
! TGCTAGTTTGCATGAATTCA+GGG + chr2_1:54103132-54103151 None:intergenic 35.0%
AAGGAATGTGTGTATGTATG+AGG + chr2_1:54103189-54103208 None:intergenic 35.0%
GTTACAGACCATAACACATA+AGG - chr2_1:54103495-54103514 Msa0212180:intron 35.0%
TGAATCTGAGAATGAAGATG+AGG + chr2_1:54103654-54103673 None:intergenic 35.0%
ATTATGCTTAGTCAACATCC+TGG + chr2_1:54103956-54103975 None:intergenic 35.0%
! TATGCTGTTCTGAACCAAAT+TGG + chr2_1:54104163-54104182 None:intergenic 35.0%
! CTTCATGCTTAATTTTCCTG+AGG - chr2_1:54104183-54104202 Msa0212180:intron 35.0%
TGAAAGTTTGGCCAAAGAAA+GGG + chr2_1:54104216-54104235 None:intergenic 35.0%
CAAAGAAATCACAGCCAATA+AGG + chr2_1:54104239-54104258 None:intergenic 35.0%
TTTGCAAATCTGATTGTCAG+TGG - chr2_1:54104255-54104274 Msa0212180:intron 35.0%
!! GAAAGCTATTGATGATGTTG+GGG - chr2_1:54104311-54104330 Msa0212180:intron 35.0%
!! AAAGCTATTGATGATGTTGG+GGG - chr2_1:54104312-54104331 Msa0212180:intron 35.0%
AGAGGATTATCACAATCCTT+GGG - chr2_1:54104385-54104404 Msa0212180:intron 35.0%
GGTAATGAGTTTGATCAAAG+AGG + chr2_1:54104485-54104504 None:intergenic 35.0%
CATTACCTCTTCAATCTTCA+AGG - chr2_1:54104498-54104517 Msa0212180:intron 35.0%
!! TTTCTAAAGCAAGTCTCCTA+TGG - chr2_1:54104539-54104558 Msa0212180:intron 35.0%
ATGAAATGACACTTTGTCGA+TGG - chr2_1:54104597-54104616 Msa0212180:intron 35.0%
TGAAATGACACTTTGTCGAT+GGG - chr2_1:54104598-54104617 Msa0212180:intron 35.0%
AACTGATAAGAAAGACCTAC+AGG + chr2_1:54104638-54104657 None:intergenic 35.0%
! ATCAGTTTTCTTGAAGTCAG+AGG - chr2_1:54104651-54104670 Msa0212180:intron 35.0%
! TCAGTTTTCTTGAAGTCAGA+GGG - chr2_1:54104652-54104671 Msa0212180:intron 35.0%
GAAAAGTTGGAGTAAAGTGA+TGG + chr2_1:54104770-54104789 None:intergenic 35.0%
! TGTTGATAAACTCAATCTGG+AGG + chr2_1:54104953-54104972 None:intergenic 35.0%
GGAAGAAAGTGATAAAGATG+TGG + chr2_1:54104980-54104999 None:intergenic 35.0%
! TCAGATTCTGAAAAGGAGAT+TGG + chr2_1:54105084-54105103 None:intergenic 35.0%
! TGTTGAGTCAGATTCTGAAA+AGG + chr2_1:54105091-54105110 None:intergenic 35.0%
GGTCAAATTGATAAGTCATC+TGG + chr2_1:54105150-54105169 None:intergenic 35.0%
ATGACTTATCAATTTGACCC+AGG - chr2_1:54105151-54105170 Msa0212180:intron 35.0%
TGACTTATCAATTTGACCCA+GGG - chr2_1:54105152-54105171 Msa0212180:intron 35.0%
TTCAACATTCTCTTGAGCTA+GGG - chr2_1:54105191-54105210 Msa0212180:intron 35.0%
CCTGTATCTGATAGAAAACT+AGG + chr2_1:54105321-54105340 None:intergenic 35.0%
!! CCTAGTTTTCTATCAGATAC+AGG - chr2_1:54105318-54105337 Msa0212180:intron 35.0%
ACCAGGAATTTGAGTAGAAA+CGG - chr2_1:54105344-54105363 Msa0212180:intron 35.0%
CATGACAGATCTCTATGAAA+AGG + chr2_1:54105481-54105500 None:intergenic 35.0%
! CTTTTCATAGAGATCTGTCA+TGG - chr2_1:54105479-54105498 Msa0212180:intron 35.0%
ATAGAGATCTGTCATGGTTA+GGG - chr2_1:54105485-54105504 Msa0212180:intron 35.0%
AAGAAGAAGACCACAAAGAA+GGG + chr2_1:54105525-54105544 None:intergenic 35.0%
AGAGAAAGAAGAGAATGACA+AGG - chr2_1:54105793-54105812 Msa0212180:intron 35.0%
GAGAAAGAAGAGAATGACAA+GGG - chr2_1:54105794-54105813 Msa0212180:intron 35.0%
TAGAGAGAGGGAAGTTAATT+GGG - chr2_1:54105851-54105870 Msa0212180:intron 35.0%
AACATGTTGACATGTTGGAT+AGG + chr2_1:54106196-54106215 None:intergenic 35.0%
AGAAGAACATGTTGACATGT+TGG + chr2_1:54106201-54106220 None:intergenic 35.0%
CTAAGAATGACTGCTACAAA+TGG + chr2_1:54106229-54106248 None:intergenic 35.0%
ATTCAACAAACTTGGTTGCA+GGG + chr2_1:54106294-54106313 None:intergenic 35.0%
GAGGTAAGATTCAACAAACT+TGG + chr2_1:54106302-54106321 None:intergenic 35.0%
!! TATGTAACCTTTGGTGATGA+TGG + chr2_1:54106452-54106471 None:intergenic 35.0%
ACATAAGACCTTGTGAGAAA+GGG + chr2_1:54106475-54106494 None:intergenic 35.0%
TACATAAGACCTTGTGAGAA+AGG + chr2_1:54106476-54106495 None:intergenic 35.0%
GTTGTTCCAAACATATGACT+GGG + chr2_1:54106517-54106536 None:intergenic 35.0%
!!! GAAGTTTGGTATTTTGACAG+TGG + chr2_1:54106539-54106558 None:intergenic 35.0%
CCTTTCTGCTACAAACTATA+CGG + chr2_1:54106650-54106669 None:intergenic 35.0%
TCATACAGATGTTGTTGAGA+AGG - chr2_1:54106728-54106747 Msa0212180:intron 35.0%
CTCTGATAACAAGACTATGT+TGG + chr2_1:54106756-54106775 None:intergenic 35.0%
!! CAACATAGTCTTGTTATCAG+AGG - chr2_1:54106754-54106773 Msa0212180:intron 35.0%
AATAAGGTTACAGACACTTC+AGG + chr2_1:54106791-54106810 None:intergenic 35.0%
AATAATGTTGCAGAAGGTGA+AGG + chr2_1:54106938-54106957 None:intergenic 35.0%
!!! GAAGAGCATTTTTATCTGCA+AGG - chr2_1:54107053-54107072 Msa0212180:intron 35.0%
! TGAGTCTTGTGATGAAGAAT+TGG + chr2_1:54107176-54107195 None:intergenic 35.0%
!! TTTCTGCTTTTCTCTGATGT+TGG - chr2_1:54107375-54107394 Msa0212180:intron 35.0%
ACTAAATCTGTAGTTCTCCT+AGG + chr2_1:54107454-54107473 None:intergenic 35.0%
CTGGCATTAAAGAAACTCAA+GGG + chr2_1:54107501-54107520 None:intergenic 35.0%
ACTGGCATTAAAGAAACTCA+AGG + chr2_1:54107502-54107521 None:intergenic 35.0%
GAAAAGGAAGTTTACTCTAC+TGG + chr2_1:54107520-54107539 None:intergenic 35.0%
CATCAACAATAGGGTTGAAA+AGG + chr2_1:54107536-54107555 None:intergenic 35.0%
ATGAAGATAGAAGAGCTCAT+TGG + chr2_1:54107583-54107602 None:intergenic 35.0%
! GCTAATGCTTTTGATACTCT+TGG + chr2_1:54107712-54107731 None:intergenic 35.0%
GTTTGAAAAACTGACCATGA+AGG + chr2_1:54107779-54107798 None:intergenic 35.0%
!!! TCTAGATTTTTTCACTCCTG+GGG - chr2_1:54107819-54107838 Msa0212180:intron 35.0%
! CAATATTGCTCAAAAGGCAT+GGG + chr2_1:54107872-54107891 None:intergenic 35.0%
TCTAAATGCTATCTTCAACG+GGG + chr2_1:54107929-54107948 None:intergenic 35.0%
CTCTAAATGCTATCTTCAAC+GGG + chr2_1:54107930-54107949 None:intergenic 35.0%
! GCTCTAAATGCTATCTTCAA+CGG + chr2_1:54107931-54107950 None:intergenic 35.0%
AGCTTCTCTTGCTAATTCTA+AGG + chr2_1:54107953-54107972 None:intergenic 35.0%
GGAAAGCAATGTTAAAAGGT+TGG + chr2_1:54108059-54108078 None:intergenic 35.0%
ATGGAACCAACTATGATTAC+TGG + chr2_1:54108128-54108147 None:intergenic 35.0%
GAGAAATTGTTAACCCAGTT+CGG - chr2_1:54108408-54108427 Msa0212180:intron 35.0%
! TTGCTGAGAGCTTTTGAATA+CGG + chr2_1:54108491-54108510 None:intergenic 35.0%
! CTAGGTTGAAGTCTAAGTTA+GGG + chr2_1:54108544-54108563 None:intergenic 35.0%
TCTGTAATTTGGGAATCACA+GGG + chr2_1:54108618-54108637 None:intergenic 35.0%
! TGCATCTAAGCTTTTAAGCA+AGG + chr2_1:54108683-54108702 None:intergenic 35.0%
CTTGCTTCAGTATATAAAGG+AGG + chr2_1:54102251-54102270 None:intergenic 35.0%
CGTCTTGCTTCAGTATATAA+AGG + chr2_1:54108893-54108912 None:intergenic 35.0%
TTAAGCAACATGGACGAATA+TGG - chr2_1:54108959-54108978 Msa0212180:intron 35.0%
TATGGAAACTCCTAGAAAGT+AGG - chr2_1:54102338-54102357 Msa0212180:intron 35.0%
ATTATGCAGCTTAGCATCAT+TGG - chr2_1:54109423-54109442 Msa0212180:intron 35.0%
GATCAAGGTGTAATTGTTGT+TGG - chr2_1:54109445-54109464 Msa0212180:intron 35.0%
AGAAAAGCTCATTTGGAAGT+TGG + chr2_1:54109513-54109532 None:intergenic 35.0%
TACAAGATGATGCCATCATT+TGG - chr2_1:54109557-54109576 Msa0212180:intron 35.0%
TCCATTTGCATACCAAATGA+TGG + chr2_1:54109572-54109591 None:intergenic 35.0%
TCCATAACTCTAAACCTTGA+GGG + chr2_1:54109660-54109679 None:intergenic 35.0%
AAACTTCATCTACAAGAGGA+TGG - chr2_1:54109880-54109899 Msa0212180:intron 35.0%
AACTTCATCTACAAGAGGAT+GGG - chr2_1:54109881-54109900 Msa0212180:intron 35.0%
CGTTTGATATTTGACGAATC+AGG - chr2_1:54110012-54110031 Msa0212180:intron 35.0%
TTCTATCAGCAATCCAAATG+GGG - chr2_1:54110071-54110090 Msa0212180:intron 35.0%
ATCAATCGGAGAATATTCGT+CGG + chr2_1:54110319-54110338 None:intergenic 35.0%
AAGTTATTTGTCAAGCAGGT+GGG - chr2_1:54110376-54110395 Msa0212180:CDS 35.0%
GAATCAGGCCAATCAATATT+TGG + chr2_1:54110444-54110463 None:intergenic 35.0%
! GCAAGATTGCTTATGTGTTT+TGG - chr2_1:54110518-54110537 Msa0212180:intron 35.0%
AAGAAGCTTCCACTATCTTA+TGG - chr2_1:54110570-54110589 Msa0212180:intron 35.0%
! ATAGAAATACCTTTTACCGC+CGG + chr2_1:54110606-54110625 None:intergenic 35.0%
ATCTTTCTTCTCTTCTGACA+AGG + chr2_1:54110661-54110680 None:intergenic 35.0%
TTGATCTTCTTGAGGTTGTA+GGG + chr2_1:54110774-54110793 None:intergenic 35.0%
TTTGATCTTCTTGAGGTTGT+AGG + chr2_1:54110775-54110794 None:intergenic 35.0%
TTTAGAGAAGAATTGGGAAG+AGG - chr2_1:54110876-54110895 Msa0212180:intron 35.0%
TCTTGTAGCATTGTCTACAA+AGG - chr2_1:54110900-54110919 Msa0212180:intron 35.0%
AAGACTGAAATGAGTGTGAT+AGG - chr2_1:54110996-54111015 Msa0212180:intron 35.0%
CAAGATTCCTATGATGAGTT+TGG + chr2_1:54111022-54111041 None:intergenic 35.0%
TCAACCCATTAAAACCAGAT+TGG - chr2_1:54111129-54111148 Msa0212180:intron 35.0%
!!! GGTTCCAATCTGGTTTTAAT+GGG + chr2_1:54111136-54111155 None:intergenic 35.0%
!!! TGGTTCCAATCTGGTTTTAA+TGG + chr2_1:54111137-54111156 None:intergenic 35.0%
GTATCAACTTTAGCGGTTAT+TGG + chr2_1:54111395-54111414 None:intergenic 35.0%
TCTTCTCGAAAAAGATAACG+AGG - chr2_1:54111547-54111566 Msa0212180:intron 35.0%
TTCAAGAAGATCCTTCTCTT+AGG - chr2_1:54111624-54111643 Msa0212180:intron 35.0%
TGCAAAACCTTCTTCATTGT+TGG + chr2_1:54111650-54111669 None:intergenic 35.0%
! AAGGTTTTGCAGATGTTAGA+AGG - chr2_1:54111659-54111678 Msa0212180:intron 35.0%
AACCAAATAGATAGGGACTT+GGG + chr2_1:54111706-54111725 None:intergenic 35.0%
ACTCAAAAGATAGGTGAAAC+AGG + chr2_1:54111981-54112000 None:intergenic 35.0%
AGTTCACATCCCCTTATTAA+AGG + chr2_1:54112250-54112269 None:intergenic 35.0%
TAAGGGGATGTGAACTTTAA+AGG - chr2_1:54112254-54112273 Msa0212180:five_prime_UTR 35.0%
AAGGGGATGTGAACTTTAAA+GGG - chr2_1:54112255-54112274 Msa0212180:five_prime_UTR 35.0%
GTAACTACATTGTGACCTTT+CGG - chr2_1:54112372-54112391 Msa0212180:five_prime_UTR 35.0%
AGAAACTTCAAGAAACCGAA+AGG + chr2_1:54112390-54112409 None:intergenic 35.0%
ATTAAGATCTACAGGACAAC+TGG + chr2_1:54112933-54112952 None:intergenic 35.0%
CACTCGTTATTAAGATCTAC+AGG + chr2_1:54112941-54112960 None:intergenic 35.0%
GGTCTACAACAAAAGTAAAG+TGG - chr2_1:54112976-54112995 Msa0212180:five_prime_UTR 35.0%
CTACAACAAAAGTAAAGTGG+TGG - chr2_1:54112979-54112998 Msa0212180:five_prime_UTR 35.0%
TTACTCTCTTGCATTCAAGA+GGG - chr2_1:54113090-54113109 Msa0212180:five_prime_UTR 35.0%
TAAGGATAGCTATAAGCATC+AGG + chr2_1:54113121-54113140 None:intergenic 35.0%
!!! GAAGCGTATGTGTGTTGTTT+TGG + chr2_1:54097861-54097880 None:intergenic 40.0%
TTATTGAAGAGGAGGAAGAG+AGG + chr2_1:54097978-54097997 None:intergenic 40.0%
ACCACTTTCCCTCTCAATTT+CGG - chr2_1:54098044-54098063 Msa0212180:intron 40.0%
TTTCAAAAACGGTCTCATGG+TGG + chr2_1:54098070-54098089 None:intergenic 40.0%
AGAGATCATCATGGGAAAGA+AGG + chr2_1:54098108-54098127 None:intergenic 40.0%
! GGTTTGGTAGAGATCATCAT+GGG + chr2_1:54098116-54098135 None:intergenic 40.0%
!! CTTGATCGGAGTATTTTCAC+TGG - chr2_1:54098149-54098168 Msa0212180:intron 40.0%
! TAGTCGCAAATCACGTTTTC+CGG + chr2_1:54098228-54098247 None:intergenic 40.0%
TAAACTTCCTATTAGGGCCT+TGG - chr2_1:54098389-54098408 Msa0212180:intron 40.0%
!! TGCAAGGAAAAGAGGTGTTT+CGG + chr2_1:54098768-54098787 None:intergenic 40.0%
CGGTGTGATTCTAATATGCA+AGG + chr2_1:54098784-54098803 None:intergenic 40.0%
! CTATAATAACTTTGGCTCCG+GGG - chr2_1:54098924-54098943 Msa0212180:intron 40.0%
! TCGGTAAAGTATTAAGGTGG+GGG - chr2_1:54099013-54099032 Msa0212180:intron 40.0%
TGGGGGCTGATTAATCATTT+AGG - chr2_1:54099030-54099049 Msa0212180:intron 40.0%
GGGGGCTGATTAATCATTTA+GGG - chr2_1:54099031-54099050 Msa0212180:intron 40.0%
GGGGCTGATTAATCATTTAG+GGG - chr2_1:54099032-54099051 Msa0212180:intron 40.0%
! AGCGGATTCCAAATGGTTAA+TGG + chr2_1:54099284-54099303 None:intergenic 40.0%
! TCATGAAAGCGGATTCCAAA+TGG + chr2_1:54099291-54099310 None:intergenic 40.0%
GGAATCCGCTTTCATGAATA+AGG - chr2_1:54099294-54099313 Msa0212180:intron 40.0%
AGTTAGGCTCTATGTATAGC+CGG - chr2_1:54099346-54099365 Msa0212180:intron 40.0%
CTTAGACGACACAAGTTTAC+CGG + chr2_1:54099368-54099387 None:intergenic 40.0%
! TTTTCGGACTTTGATCCGAA+AGG - chr2_1:54099419-54099438 Msa0212180:intron 40.0%
ATTGAAATAGGAGGCAAAGG+GGG - chr2_1:54099658-54099677 Msa0212180:intron 40.0%
TCCCATGGTTGAAGATGAAA+TGG + chr2_1:54099766-54099785 None:intergenic 40.0%
ATGTGATACTACTCTGGTCA+AGG + chr2_1:54099792-54099811 None:intergenic 40.0%
GCAATCACAGAATAGCAGAA+CGG - chr2_1:54099842-54099861 Msa0212180:intron 40.0%
GTACACTAGGAGAAATAGGA+TGG - chr2_1:54099934-54099953 Msa0212180:intron 40.0%
TTGGTGAACCCAAGTTTCAA+TGG + chr2_1:54100060-54100079 None:intergenic 40.0%
ACATTATAGCCATTGCTGGT+TGG + chr2_1:54100079-54100098 None:intergenic 40.0%
CTGCCAGTCTGTAAAATTCT+TGG - chr2_1:54100255-54100274 Msa0212180:intron 40.0%
TGACTGAGTTGTGTGACTTA+GGG - chr2_1:54100508-54100527 Msa0212180:intron 40.0%
! GTTGGTAGGGAATTGAAACT+TGG - chr2_1:54100671-54100690 Msa0212180:intron 40.0%
! CTTGGATTAGAGAACTTGAG+AGG - chr2_1:54100689-54100708 Msa0212180:intron 40.0%
!! GAAATTGTGGCTCTAGTTGT+TGG - chr2_1:54100956-54100975 Msa0212180:CDS 40.0%
! GCAGCAACTTTTAATGCCAA+AGG + chr2_1:54101452-54101471 None:intergenic 40.0%
GGCATTAAAAGTTGCTGCTA+TGG - chr2_1:54101454-54101473 Msa0212180:CDS 40.0%
! TTTGGGACAGAGTTTAGAGA+CGG - chr2_1:54101827-54101846 Msa0212180:intron 40.0%
TAATCCGTCTCTATCAGAGA+CGG - chr2_1:54101954-54101973 Msa0212180:intron 40.0%
ATTTCCGTCTCTGATAGAGA+CGG + chr2_1:54101961-54101980 None:intergenic 40.0%
!! GTCTCTAAAGCCTTTAGAGA+CGG + chr2_1:54101991-54102010 None:intergenic 40.0%
AGAGACGACAAAAACAACGA+CGG - chr2_1:54102005-54102024 Msa0212180:intron 40.0%
GTCTCTAAACATGTCTGAGA+CGG + chr2_1:54102051-54102070 None:intergenic 40.0%
!! GCAAAATCCGTCTCTAAAAC+AGG + chr2_1:54102082-54102101 None:intergenic 40.0%
CGCCTTGCTTCAGTATATAA+AGG + chr2_1:54102254-54102273 None:intergenic 40.0%
CCATCAATCATGCTTCAGAT+CGG - chr2_1:54102281-54102300 Msa0212180:intron 40.0%
TTAAGCAACATGGACGGATA+TGG - chr2_1:54102320-54102339 Msa0212180:intron 40.0%
CGATTCATACCAACATATGC+TGG - chr2_1:54102448-54102467 Msa0212180:intron 40.0%
AGCCAAAAATTTGCCAAAGG+GGG + chr2_1:54102628-54102647 None:intergenic 40.0%
AGCTATCTCTCTGTCTTAAC+AGG + chr2_1:54102670-54102689 None:intergenic 40.0%
GCAGACAAGAGAAGCTAAAA+AGG - chr2_1:54102882-54102901 Msa0212180:intron 40.0%
TGACAGTTGACTGTCTGTTT+AGG + chr2_1:54102972-54102991 None:intergenic 40.0%
CTGAATGTTCTTGTGGATGT+TGG + chr2_1:54103056-54103075 None:intergenic 40.0%
CAACATCCACAAGAACATTC+AGG - chr2_1:54103054-54103073 Msa0212180:intron 40.0%
ATTGTCCCTGAATGTTCTTG+TGG + chr2_1:54103063-54103082 None:intergenic 40.0%
! TCTGTTTGTACTCTTTGAGG+GGG + chr2_1:54103096-54103115 None:intergenic 40.0%
! CTAGTTTGCATGAATTCAGG+GGG + chr2_1:54103130-54103149 None:intergenic 40.0%
! GCTAGTTTGCATGAATTCAG+GGG + chr2_1:54103131-54103150 None:intergenic 40.0%
! CTGCTAGTTTGCATGAATTC+AGG + chr2_1:54103133-54103152 None:intergenic 40.0%
ATGTTGAGACATCAGACTTC+TGG + chr2_1:54103226-54103245 None:intergenic 40.0%
CTAGTTGTCTTAGGTGATGT+TGG + chr2_1:54103341-54103360 None:intergenic 40.0%
!! TGTTTTTGTGGGATATGCCT+TGG + chr2_1:54103533-54103552 None:intergenic 40.0%
!! AGGATGAAGAAGAAGCATCT+GGG + chr2_1:54103619-54103638 None:intergenic 40.0%
!! AAGGATGAAGAAGAAGCATC+TGG + chr2_1:54103620-54103639 None:intergenic 40.0%
TTTGCTTCTGTTCCTAGTAC+AGG + chr2_1:54103833-54103852 None:intergenic 40.0%
GCAAATGTTCCAACAAGATC+TGG - chr2_1:54103848-54103867 Msa0212180:intron 40.0%
AATCATGCTCCAGATCTTGT+TGG + chr2_1:54103860-54103879 None:intergenic 40.0%
AGAGGAGATTCTCTCTTCAT+TGG - chr2_1:54103908-54103927 Msa0212180:intron 40.0%
AGCAAGGTAGGAAAAGCAAT+TGG - chr2_1:54103983-54104002 Msa0212180:intron 40.0%
GCAAGGTAGGAAAAGCAATT+GGG - chr2_1:54103984-54104003 Msa0212180:intron 40.0%
TCAGACATTGCAACAGGTTT+GGG + chr2_1:54104109-54104128 None:intergenic 40.0%
AAGAAAGGGAAGATTTCCTC+AGG + chr2_1:54104202-54104221 None:intergenic 40.0%
GAGGAAATCTTCCCTTTCTT+TGG - chr2_1:54104202-54104221 Msa0212180:intron 40.0%
GTGAAAGTTTGGCCAAAGAA+AGG + chr2_1:54104217-54104236 None:intergenic 40.0%
TGGCCAAACTTTCACCTTAT+TGG - chr2_1:54104222-54104241 Msa0212180:intron 40.0%
CAGCCAATAAGGTGAAAGTT+TGG + chr2_1:54104228-54104247 None:intergenic 40.0%
!! AATAGCTTTCTAGGTGTCGA+AGG + chr2_1:54104301-54104320 None:intergenic 40.0%
AGGATTGTGATAATCCTCTC+AGG + chr2_1:54104384-54104403 None:intergenic 40.0%
GAGAGGATTATCACAATCCT+TGG - chr2_1:54104384-54104403 Msa0212180:intron 40.0%
ATGAGTTTGATCAAAGAGGC+TGG + chr2_1:54104481-54104500 None:intergenic 40.0%
AGAAAGAGAACTGAGTGAAG+AGG + chr2_1:54104524-54104543 None:intergenic 40.0%
ATCTTCCAAGCTTTGCTAAG+AGG + chr2_1:54104579-54104598 None:intergenic 40.0%
TGATAAGAAAGACCTACAGG+TGG + chr2_1:54104635-54104654 None:intergenic 40.0%
AAGTCAGAGGGAATGATGTT+TGG - chr2_1:54104664-54104683 Msa0212180:intron 40.0%
! GTATTGGCCCAAAGAAAAGT+TGG + chr2_1:54104783-54104802 None:intergenic 40.0%
AGGACAAAGTCTGCTAGTAT+TGG + chr2_1:54104799-54104818 None:intergenic 40.0%
! AGCAGACTTTGTCCTTCTTT+TGG - chr2_1:54104804-54104823 Msa0212180:intron 40.0%
! GCAGACTTTGTCCTTCTTTT+GGG - chr2_1:54104805-54104824 Msa0212180:intron 40.0%
TGACTGAAACACCCAAAAGA+AGG + chr2_1:54104819-54104838 None:intergenic 40.0%
!! TATCCGTCTTCTTTGAGGTT+TGG - chr2_1:54104845-54104864 Msa0212180:intron 40.0%
TAGCCAAACCTCAAAGAAGA+CGG + chr2_1:54104851-54104870 None:intergenic 40.0%
TCAGAATCTGACTCAACACT+AGG - chr2_1:54105093-54105112 Msa0212180:intron 40.0%
TAAGTCATCTGGTGAAGAAG+AGG + chr2_1:54105139-54105158 None:intergenic 40.0%
AGCTCAAGAGAATGTTGAAC+CGG + chr2_1:54105190-54105209 None:intergenic 40.0%
GTTCAACATTCTCTTGAGCT+AGG - chr2_1:54105190-54105209 Msa0212180:intron 40.0%
TCAGTACCAGTTTCTTTCTC+CGG - chr2_1:54105240-54105259 Msa0212180:intron 40.0%
GATAAACCGGAGAAAGAAAC+TGG + chr2_1:54105249-54105268 None:intergenic 40.0%
CCAGGAATTTGAGTAGAAAC+GGG - chr2_1:54105345-54105364 Msa0212180:intron 40.0%
!!! GGAGAATCCTTTTAAGACGA+CGG + chr2_1:54105460-54105479 None:intergenic 40.0%
CATAGAGATCTGTCATGGTT+AGG - chr2_1:54105484-54105503 Msa0212180:intron 40.0%
GAAGAAGAAGACCACAAAGA+AGG + chr2_1:54105526-54105545 None:intergenic 40.0%
AGAAGAGAATGACAAGGGTT+AGG - chr2_1:54105799-54105818 Msa0212180:intron 40.0%
ATGTGTGATATGATTGCGGT+TGG - chr2_1:54105828-54105847 Msa0212180:intron 40.0%
GTAGAGAGAGGGAAGTTAAT+TGG - chr2_1:54105850-54105869 Msa0212180:intron 40.0%
TTAGTGCACGCATATTTAGG+CGG + chr2_1:54105882-54105901 None:intergenic 40.0%
AGGCTATAGCAGTTAACTAG+GGG + chr2_1:54105942-54105961 None:intergenic 40.0%
GAGGCTATAGCAGTTAACTA+GGG + chr2_1:54105943-54105962 None:intergenic 40.0%
AGAGGCTATAGCAGTTAACT+AGG + chr2_1:54105944-54105963 None:intergenic 40.0%
! TGGACATTTCTCTAAGGAAG+AGG + chr2_1:54105962-54105981 None:intergenic 40.0%
ACAGACTGGACATTTCTCTA+AGG + chr2_1:54105968-54105987 None:intergenic 40.0%
CACTCTCAAGAAGTAACAAG+AGG + chr2_1:54106140-54106159 None:intergenic 40.0%
!! GAGGGACTAGTTCTTATGAA+AGG + chr2_1:54106260-54106279 None:intergenic 40.0%
TGCAGGGTAACAAATAAGGA+GGG + chr2_1:54106278-54106297 None:intergenic 40.0%
TTGCAGGGTAACAAATAAGG+AGG + chr2_1:54106279-54106298 None:intergenic 40.0%
TGGTTGCAGGGTAACAAATA+AGG + chr2_1:54106282-54106301 None:intergenic 40.0%
GATTCAACAAACTTGGTTGC+AGG + chr2_1:54106295-54106314 None:intergenic 40.0%
!! AACCTTTGGTGATGATGGTA+GGG + chr2_1:54106447-54106466 None:intergenic 40.0%
!! TAACCTTTGGTGATGATGGT+AGG + chr2_1:54106448-54106467 None:intergenic 40.0%
! GAGAAAGGGTATGTAACCTT+TGG + chr2_1:54106461-54106480 None:intergenic 40.0%
GTTACATACCCTTTCTCACA+AGG - chr2_1:54106464-54106483 Msa0212180:intron 40.0%
GTCATTCCCAGTCATATGTT+TGG - chr2_1:54106508-54106527 Msa0212180:intron 40.0%
GGTTGTTCCAAACATATGAC+TGG + chr2_1:54106518-54106537 None:intergenic 40.0%
AGTGACAATGTTTGCTTGGT+AGG + chr2_1:54106590-54106609 None:intergenic 40.0%
TAGGAGTGACAATGTTTGCT+TGG + chr2_1:54106594-54106613 None:intergenic 40.0%
AAGCAAACATTGTCACTCCT+AGG - chr2_1:54106593-54106612 Msa0212180:intron 40.0%
TCAATCACAAATGGATGCCT+AGG + chr2_1:54106613-54106632 None:intergenic 40.0%
! CCGTATAGTTTGTAGCAGAA+AGG - chr2_1:54106647-54106666 Msa0212180:intron 40.0%
TGTAGCAGAAAGGTCTAATG+TGG - chr2_1:54106657-54106676 Msa0212180:intron 40.0%
GTTACAGACACTTCAGGAAA+TGG + chr2_1:54106785-54106804 None:intergenic 40.0%
GAAGGCAAGAGACAAACAAA+AGG + chr2_1:54106920-54106939 None:intergenic 40.0%
GGTATCTGAACTCAATGTTG+AGG + chr2_1:54107026-54107045 None:intergenic 40.0%
GAAGATCAATGTCGTGAATG+TGG + chr2_1:54107349-54107368 None:intergenic 40.0%
CAGAGAAAAGCAGAAAGACA+AGG + chr2_1:54107371-54107390 None:intergenic 40.0%
AAAGAAACTCAAGGGAATCC+TGG + chr2_1:54107493-54107512 None:intergenic 40.0%
GATACTCTCATCTTCCTTCA+TGG - chr2_1:54107762-54107781 Msa0212180:intron 40.0%
!! GGTCAGTTTTTCAAACTGAG+TGG - chr2_1:54107783-54107802 Msa0212180:intron 40.0%
! TCAAAAGGCATGGGAAATTC+TGG + chr2_1:54107863-54107882 None:intergenic 40.0%
GCAATATTGCTCAAAAGGCA+TGG + chr2_1:54107873-54107892 None:intergenic 40.0%
TCTGGCAATATGGAGAAAGA+AGG + chr2_1:54108180-54108199 None:intergenic 40.0%
GGAGATGTATTCTGGCAATA+TGG + chr2_1:54108190-54108209 None:intergenic 40.0%
ATAACAATTGGCATCAGAGC+AGG + chr2_1:54108243-54108262 None:intergenic 40.0%
GTTGAAGTCTAAGTTAGGGT+AGG + chr2_1:54108540-54108559 None:intergenic 40.0%
! CCTAGGTTGAAGTCTAAGTT+AGG + chr2_1:54108545-54108564 None:intergenic 40.0%
CCTAACTTAGACTTCAACCT+AGG - chr2_1:54108542-54108561 Msa0212180:intron 40.0%
GGGATTGTGATCTGTTGTAA+GGG + chr2_1:54108597-54108616 None:intergenic 40.0%
CTGTAATTTGGGAATCACAG+GGG + chr2_1:54108617-54108636 None:intergenic 40.0%
GTCTGTAATTTGGGAATCAC+AGG + chr2_1:54108619-54108638 None:intergenic 40.0%
! AAGCTTTTAAGCAAGGAGCT+AGG + chr2_1:54108718-54108737 None:intergenic 40.0%
AGCTCCTTGCTTAAAAGCTT+CGG - chr2_1:54108718-54108737 Msa0212180:intron 40.0%
! TACTCCGAAGCTTTTAAGCA+AGG + chr2_1:54108725-54108744 None:intergenic 40.0%
! TCGATCTGAAGCATGATTGA+AGG + chr2_1:54108923-54108942 None:intergenic 40.0%
AGCTTAGCATCATTGGATCA+AGG - chr2_1:54109430-54109449 Msa0212180:intron 40.0%
! TCCAAATGAGCTTTTCTTGC+TGG - chr2_1:54109516-54109535 Msa0212180:intron 40.0%
!! AGCTTTTCTTGCTGGCTATA+TGG - chr2_1:54109524-54109543 Msa0212180:intron 40.0%
GCCATCATTTGGTATGCAAA+TGG - chr2_1:54109568-54109587 Msa0212180:intron 40.0%
ATCTTGATCCCTTAGAAGCA+GGG + chr2_1:54109600-54109619 None:intergenic 40.0%
AATCTTGATCCCTTAGAAGC+AGG + chr2_1:54109601-54109620 None:intergenic 40.0%
! ACCCTCAAGGTTTAGAGTTA+TGG - chr2_1:54109656-54109675 Msa0212180:intron 40.0%
CTCCATAACTCTAAACCTTG+AGG + chr2_1:54109661-54109680 None:intergenic 40.0%
TGGAGATCAGATTTCACATC+AGG - chr2_1:54109676-54109695 Msa0212180:intron 40.0%
TTCGGTACTAATGTGTCAGT+AGG + chr2_1:54109790-54109809 None:intergenic 40.0%
GGAAATCTTTCTTCACGACA+AGG - chr2_1:54109829-54109848 Msa0212180:intron 40.0%
TGCCAAGCAATTACAGTTAC+AGG - chr2_1:54109929-54109948 Msa0212180:intron 40.0%
! ATGGTCATAGAAGCGTAGTA+AGG + chr2_1:54109955-54109974 None:intergenic 40.0%
TACGCTTCTATGACCATTAG+TGG - chr2_1:54109958-54109977 Msa0212180:intron 40.0%
TACCCTAAAGATCCAAAGAG+AGG - chr2_1:54110162-54110181 Msa0212180:intron 40.0%
GTCCTCTCTTTGGATCTTTA+GGG + chr2_1:54110167-54110186 None:intergenic 40.0%
TGTCCTCTCTTTGGATCTTT+AGG + chr2_1:54110168-54110187 None:intergenic 40.0%
ATCCAAAGAGAGGACAAAGT+TGG - chr2_1:54110172-54110191 Msa0212180:intron 40.0%
TCCAAAGAGAGGACAAAGTT+GGG - chr2_1:54110173-54110192 Msa0212180:intron 40.0%
TGTTTGCATTCTACACTCCT+AGG - chr2_1:54110225-54110244 Msa0212180:intron 40.0%
GCACCATTACAAATGACCAA+AGG - chr2_1:54110277-54110296 Msa0212180:intron 40.0%
TGGCCTTTGGTCATTTGTAA+TGG + chr2_1:54110283-54110302 None:intergenic 40.0%
TCAATCGGAGAATATTCGTC+GGG + chr2_1:54110318-54110337 None:intergenic 40.0%
CAAGTTATTTGTCAAGCAGG+TGG - chr2_1:54110375-54110394 Msa0212180:CDS 40.0%
TTATGGTGTAAATGATCCGG+CGG - chr2_1:54110587-54110606 Msa0212180:intron 40.0%
TTTCTTCTCTTCTGACAAGG+AGG + chr2_1:54110658-54110677 None:intergenic 40.0%
!! TTCAGTTCTTTTGGGAAGCT+CGG - chr2_1:54110704-54110723 Msa0212180:intron 40.0%
TGATCTTCTTGAGGTTGTAG+GGG + chr2_1:54110773-54110792 None:intergenic 40.0%
!!! CTTGCGCAGTTTTAGCTTTA+AGG - chr2_1:54110830-54110849 Msa0212180:intron 40.0%
TGATAGGCCAAACTCATCAT+AGG - chr2_1:54111012-54111031 Msa0212180:intron 40.0%
CGTTGCAATATCCAAGAAGA+CGG + chr2_1:54111046-54111065 None:intergenic 40.0%
CTTCTTGGATATTGCAACGA+AGG - chr2_1:54111047-54111066 Msa0212180:intron 40.0%
CAACGAGTCAACATTATCCT+GGG - chr2_1:54111155-54111174 Msa0212180:intron 40.0%
AACGAGTCAACATTATCCTG+GGG - chr2_1:54111156-54111175 Msa0212180:intron 40.0%
AATCAAAGCCACACTGAAAC+TGG - chr2_1:54111320-54111339 Msa0212180:intron 40.0%
CTCTAATTCCAGTTTCAGTG+TGG + chr2_1:54111331-54111350 None:intergenic 40.0%
CACACTGAAACTGGAATTAG+AGG - chr2_1:54111329-54111348 Msa0212180:intron 40.0%
ACTGGAATTAGAGGAACCAA+AGG - chr2_1:54111338-54111357 Msa0212180:intron 40.0%
CTGGAATTAGAGGAACCAAA+GGG - chr2_1:54111339-54111358 Msa0212180:intron 40.0%
!! ATGTTGCACCAGATTGGTTT+AGG - chr2_1:54111363-54111382 Msa0212180:intron 40.0%
! TTCATTGTTGGCCTAAGAGA+AGG + chr2_1:54111638-54111657 None:intergenic 40.0%
TCTTAGGCCAACAATGAAGA+AGG - chr2_1:54111640-54111659 Msa0212180:intron 40.0%
ACCAAATAGATAGGGACTTG+GGG + chr2_1:54111705-54111724 None:intergenic 40.0%
GAACCAAATAGATAGGGACT+TGG + chr2_1:54111707-54111726 None:intergenic 40.0%
TGTCTGTTATTGGGAACTAG+TGG - chr2_1:54111931-54111950 Msa0212180:intron 40.0%
!!! AGGTTTTTTAGCGCATCTAC+TGG - chr2_1:54112182-54112201 Msa0212180:five_prime_UTR 40.0%
!! TGAACTTTAAAGGGTGCTCT+TGG - chr2_1:54112264-54112283 Msa0212180:five_prime_UTR 40.0%
!! GAACTTTAAAGGGTGCTCTT+GGG - chr2_1:54112265-54112284 Msa0212180:five_prime_UTR 40.0%
!! TAGCTCGTGAAGTGTTGTTT+GGG - chr2_1:54112315-54112334 Msa0212180:five_prime_UTR 40.0%
AAATGCTAACATGCCCGTTA+GGG - chr2_1:54112547-54112566 Msa0212180:five_prime_UTR 40.0%
TGCTGCTGAAAAATAGGAAG+TGG + chr2_1:54112910-54112929 None:intergenic 40.0%
!! AACTGGTGCTGCTGAAAAAT+AGG + chr2_1:54112916-54112935 None:intergenic 40.0%
TCTTAATAACGAGTGTCCCA+CGG - chr2_1:54112946-54112965 Msa0212180:five_prime_UTR 40.0%
!! TTGAAGCGTTTTTGTTGCGT+TGG - chr2_1:54113031-54113050 Msa0212180:five_prime_UTR 40.0%
CTTACTCTCTTGCATTCAAG+AGG - chr2_1:54113089-54113108 Msa0212180:five_prime_UTR 40.0%
! GTTTTCGTCCCATAATCGTA+AGG + chr2_1:54113139-54113158 None:intergenic 40.0%
GATGGGAAAAGAAACACGTG+TGG + chr2_1:54097818-54097837 None:intergenic 45.0%
TGAGAGGGAAAGTGGTGATT+GGG + chr2_1:54098040-54098059 None:intergenic 45.0%
TTGAGAGGGAAAGTGGTGAT+TGG + chr2_1:54098041-54098060 None:intergenic 45.0%
! GGGTTTGGTAGAGATCATCA+TGG + chr2_1:54098117-54098136 None:intergenic 45.0%
ATATCCACCAAGGCCCTAAT+AGG + chr2_1:54098399-54098418 None:intergenic 45.0%
AAAATGCTTCCAAGATGCCC+CGG + chr2_1:54098944-54098963 None:intergenic 45.0%
AACGTTCTGTAGTTGCTACG+CGG - chr2_1:54098984-54099003 Msa0212180:intron 45.0%
GGACTTTGATCCGAAAGGAT+TGG - chr2_1:54099424-54099443 Msa0212180:intron 45.0%
ACATCTCGACTCAATGCGAA+AGG + chr2_1:54099477-54099496 None:intergenic 45.0%
CAACAGAACACAGTTTCACC+TGG + chr2_1:54099590-54099609 None:intergenic 45.0%
TTGAAATAGGAGGCAAAGGG+GGG - chr2_1:54099659-54099678 Msa0212180:intron 45.0%
ATGGTATGAGTCATCCTCCA+AGG + chr2_1:54099747-54099766 None:intergenic 45.0%
CACAGAATAGCAGAACGGAA+AGG - chr2_1:54099847-54099866 Msa0212180:intron 45.0%
AGCTAAATGTGTTGCACCAG+AGG + chr2_1:54099874-54099893 None:intergenic 45.0%
! TGCTTTGGGCCATTGAAACT+TGG - chr2_1:54100048-54100067 Msa0212180:intron 45.0%
! GCTTTGGGCCATTGAAACTT+GGG - chr2_1:54100049-54100068 Msa0212180:intron 45.0%
ATACAGGAAGGTAGTCAGTC+TGG + chr2_1:54100139-54100158 None:intergenic 45.0%
AACAGCTGCTACATACAGGA+AGG + chr2_1:54100151-54100170 None:intergenic 45.0%
AGGTAACAGCTGCTACATAC+AGG + chr2_1:54100155-54100174 None:intergenic 45.0%
GTGACTGAGTTGTGTGACTT+AGG - chr2_1:54100507-54100526 Msa0212180:intron 45.0%
! ACTTGGATTAGAGATGGCTG+TGG - chr2_1:54100649-54100668 Msa0212180:intron 45.0%
CTTCAATAGTAGGGGGTCTT+TGG - chr2_1:54101384-54101403 Msa0212180:intron 45.0%
AAATTCCGTCTCTACGGAGA+CGG + chr2_1:54101780-54101799 None:intergenic 45.0%
AGAGATTAATCCGTCGCAGT+TGG + chr2_1:54101886-54101905 None:intergenic 45.0%
! CCGATCTGAAGCATGATTGA+TGG + chr2_1:54102284-54102303 None:intergenic 45.0%
CATACCAACATATGCTGGTG+TGG - chr2_1:54102453-54102472 Msa0212180:intron 45.0%
GAATCCACACCAGCATATGT+TGG + chr2_1:54102460-54102479 None:intergenic 45.0%
CAATGTTCAACATCCAGACC+TGG + chr2_1:54102536-54102555 None:intergenic 45.0%
TATCCAACAATCTCCCCCTT+TGG - chr2_1:54102612-54102631 Msa0212180:intron 45.0%
! CTCCCCCTTTGGCAAATTTT+TGG - chr2_1:54102623-54102642 Msa0212180:intron 45.0%
CTCTCTGTCTTAACAGGTGT+GGG + chr2_1:54102664-54102683 None:intergenic 45.0%
TCTCTCTGTCTTAACAGGTG+TGG + chr2_1:54102665-54102684 None:intergenic 45.0%
AGATCAGAGTCTTGCAGCAA+AGG - chr2_1:54102916-54102935 Msa0212180:intron 45.0%
CTTGCAGCAAAGGACGTATA+AGG - chr2_1:54102926-54102945 Msa0212180:intron 45.0%
GTTCAGTAGCTCAAACCATC+AGG - chr2_1:54103025-54103044 Msa0212180:intron 45.0%
TGGATGTTGGAACATCCTGA+TGG + chr2_1:54103043-54103062 None:intergenic 45.0%
TTGTCTGCAATCCCTTGATC+TGG + chr2_1:54103278-54103297 None:intergenic 45.0%
AGATGAGGAAGCTGATGACA+AGG + chr2_1:54103639-54103658 None:intergenic 45.0%
GGAGAGTGAAAAGGAAGTTG+AGG + chr2_1:54103678-54103697 None:intergenic 45.0%
TAAGGAGCTGGAGAGTGAAA+AGG + chr2_1:54103687-54103706 None:intergenic 45.0%
TGGTACAGAAGATAAGGAGC+TGG + chr2_1:54103699-54103718 None:intergenic 45.0%
GGAAGCTGGTACAGAAGATA+AGG + chr2_1:54103705-54103724 None:intergenic 45.0%
CATAGCACATGTGTCCTTCA+AGG - chr2_1:54103778-54103797 Msa0212180:intron 45.0%
AGAGATCATTGCAGCCTTGA+AGG + chr2_1:54103795-54103814 None:intergenic 45.0%
TCATCAGCATAGATGAGACC+AGG - chr2_1:54103935-54103954 Msa0212180:intron 45.0%
GAATCTGACAGCATCAGTCT+TGG - chr2_1:54104006-54104025 Msa0212180:intron 45.0%
CTCAGACATTGCAACAGGTT+TGG + chr2_1:54104110-54104129 None:intergenic 45.0%
CAAACCTGTTGCAATGTCTG+AGG - chr2_1:54104108-54104127 Msa0212180:intron 45.0%
AATGTCTGAGGAGTGAGTAG+TGG - chr2_1:54104120-54104139 Msa0212180:intron 45.0%
ATGTCTGAGGAGTGAGTAGT+GGG - chr2_1:54104121-54104140 Msa0212180:intron 45.0%
CCAAATTGGAGCTGCAAACT+GGG + chr2_1:54104149-54104168 None:intergenic 45.0%
ACCAAATTGGAGCTGCAAAC+TGG + chr2_1:54104150-54104169 None:intergenic 45.0%
!! AGGAGAGTGCTATGAAAAGC+TGG + chr2_1:54104434-54104453 None:intergenic 45.0%
GAGAAAACAGTGTGCAAGCT+AGG + chr2_1:54104454-54104473 None:intergenic 45.0%
! TTTGATCAAAGAGGCTGGTC+TGG + chr2_1:54104476-54104495 None:intergenic 45.0%
AGAGGCCTTGAAGATTGAAG+AGG + chr2_1:54104506-54104525 None:intergenic 45.0%
TTCCACCTCTTAGCAAAGCT+TGG - chr2_1:54104571-54104590 Msa0212180:intron 45.0%
TTCCAAGCTTTGCTAAGAGG+TGG + chr2_1:54104576-54104595 None:intergenic 45.0%
TTTGGGTGTTTCAGTCACAG+TGG - chr2_1:54104822-54104841 Msa0212180:intron 45.0%
AGTGGTATCCGTCTTCTTTG+AGG - chr2_1:54104840-54104859 Msa0212180:intron 45.0%
! TTTGAGGTTTGGCTAACAGC+AGG - chr2_1:54104856-54104875 Msa0212180:intron 45.0%
TCTTGGCCATGCTATTACCA+AGG - chr2_1:54104908-54104927 Msa0212180:intron 45.0%
CTTGGCCATGCTATTACCAA+GGG - chr2_1:54104909-54104928 Msa0212180:intron 45.0%
! ACAGACCCTTGGTAATAGCA+TGG + chr2_1:54104917-54104936 None:intergenic 45.0%
TTACCAAGGGTCTGTGTCTA+AGG - chr2_1:54104922-54104941 Msa0212180:intron 45.0%
ACAGAAGAGGATAGTGTCTC+TGG + chr2_1:54105033-54105052 None:intergenic 45.0%
GGAGAAAGCTCAAACAGAAG+AGG + chr2_1:54105046-54105065 None:intergenic 45.0%
AGCTTTCTCCACAGTCCTTT+CGG - chr2_1:54105056-54105075 Msa0212180:intron 45.0%
! AAAAGGAGATTGGTCCCGAA+AGG + chr2_1:54105074-54105093 None:intergenic 45.0%
GGAGAAAGAAACTGGTACTG+AGG + chr2_1:54105241-54105260 None:intergenic 45.0%
CTATCAGATACAGGTTCACC+AGG - chr2_1:54105327-54105346 Msa0212180:intron 45.0%
CCCGTTTCTACTCAAATTCC+TGG + chr2_1:54105348-54105367 None:intergenic 45.0%
GGATTACCTTTCTCACGACT+AGG - chr2_1:54105366-54105385 Msa0212180:intron 45.0%
! ACTAGGTGTTGCAACATCTG+AGG - chr2_1:54105383-54105402 Msa0212180:intron 45.0%
GCTGTTAGTGATACTAACGC+TGG + chr2_1:54105426-54105445 None:intergenic 45.0%
!!! CCTTTTAAGACGACGGAGAA+AGG + chr2_1:54105453-54105472 None:intergenic 45.0%
CCTTTCTCCGTCGTCTTAAA+AGG - chr2_1:54105450-54105469 Msa0212180:intron 45.0%
CTTGGATTCACCCTTCTTTG+TGG - chr2_1:54105512-54105531 Msa0212180:intron 45.0%
GGTCTTCTTCTTCTTAGTGC+AGG - chr2_1:54105533-54105552 Msa0212180:intron 45.0%
TTGAGTGGCTTGACCATCTT+AGG - chr2_1:54105600-54105619 Msa0212180:intron 45.0%
! GGAACTGGTTTCACATTGAG+CGG - chr2_1:54105629-54105648 Msa0212180:intron 45.0%
GATATCGAATGGGGTGAGAA+AGG - chr2_1:54105715-54105734 Msa0212180:intron 45.0%
GCAAAAGAAGGTTGTGCTTC+AGG + chr2_1:54105912-54105931 None:intergenic 45.0%
! AGGGGAAAGCATGCAAAAGA+AGG + chr2_1:54105924-54105943 None:intergenic 45.0%
ATCAGCTGCATCCCTATAGA+AGG + chr2_1:54106050-54106069 None:intergenic 45.0%
! GGGATGCAGCTGATTTCTTT+AGG - chr2_1:54106056-54106075 Msa0212180:intron 45.0%
TGAATCTTACCTCCAGACCT+TGG - chr2_1:54106309-54106328 Msa0212180:intron 45.0%
AGGGGAGAAATACGAGGTAA+AGG + chr2_1:54106428-54106447 None:intergenic 45.0%
!! ACCTTTGGTGATGATGGTAG+GGG + chr2_1:54106446-54106465 None:intergenic 45.0%
AGAAAAGGAGAACTCGCCTT+TGG + chr2_1:54106709-54106728 None:intergenic 45.0%
ACAGACACTTCAGGAAATGG+TGG + chr2_1:54106782-54106801 None:intergenic 45.0%
GCATATGCTGTGGAAGATCA+TGG + chr2_1:54106845-54106864 None:intergenic 45.0%
! TGTCGTGAATGTGGAGGTTT+TGG + chr2_1:54107340-54107359 None:intergenic 45.0%
GATCAATGTCGTGAATGTGG+AGG + chr2_1:54107346-54107365 None:intergenic 45.0%
!! ATTACTTATGAAGGCACCCC+AGG + chr2_1:54107838-54107857 None:intergenic 45.0%
AGAAGATTGGACTTCAGCTG+AGG + chr2_1:54107980-54107999 None:intergenic 45.0%
AAAAGGTTGGGAACATCCTG+TGG + chr2_1:54108046-54108065 None:intergenic 45.0%
! TAGTTGGTTCCATCTAGCAC+TGG - chr2_1:54108135-54108154 Msa0212180:intron 45.0%
GGCAATATGGAGAAAGAAGG+AGG + chr2_1:54108177-54108196 None:intergenic 45.0%
TTGCCAGAATACATCTCCTC+TGG - chr2_1:54108192-54108211 Msa0212180:intron 45.0%
GATCCAGAGGAGATGTATTC+TGG + chr2_1:54108198-54108217 None:intergenic 45.0%
TGTTATTGGGTGAGATCCAG+AGG + chr2_1:54108211-54108230 None:intergenic 45.0%
TCTGGATCTCACCCAATAAC+AGG - chr2_1:54108210-54108229 Msa0212180:intron 45.0%
ATCTCACCCAATAACAGGCA+GGG - chr2_1:54108215-54108234 Msa0212180:intron 45.0%
CTGTTTACTGCGTTCTGTGT+TGG + chr2_1:54108303-54108322 None:intergenic 45.0%
! TTGAATACGGACTGCACTAG+TGG + chr2_1:54108478-54108497 None:intergenic 45.0%
CTAGGTCATAAGTGCAAACG+TGG + chr2_1:54108515-54108534 None:intergenic 45.0%
CACGTTTGCACTTATGACCT+AGG - chr2_1:54108513-54108532 Msa0212180:intron 45.0%
TCTAAGTTAGGGTAGGTCCT+AGG + chr2_1:54108533-54108552 None:intergenic 45.0%
TCTCAGATCTAGGAGTTCCT+AGG + chr2_1:54108562-54108581 None:intergenic 45.0%
TGAGATGGGATCTCAGATCT+AGG + chr2_1:54108572-54108591 None:intergenic 45.0%
CTGTTGTAAGGGAGTGAGAT+GGG + chr2_1:54108586-54108605 None:intergenic 45.0%
TCTGTTGTAAGGGAGTGAGA+TGG + chr2_1:54108587-54108606 None:intergenic 45.0%
GGGGATTGTGATCTGTTGTA+AGG + chr2_1:54108598-54108617 None:intergenic 45.0%
CAGTATATAAAGGAGGCTGC+AGG + chr2_1:54102244-54102263 None:intergenic 45.0%
CGATTCATACCAACACATGC+TGG - chr2_1:54109092-54109111 Msa0212180:intron 45.0%
AAGCACAGAACATACAGACC+AGG - chr2_1:54109159-54109178 Msa0212180:intron 45.0%
AATGTTCCAACAACCAGACC+TGG + chr2_1:54109180-54109199 None:intergenic 45.0%
TGGTGAGTCACTTACTGCTT+CGG - chr2_1:54109465-54109484 Msa0212180:intron 45.0%
! GCTTCGGGAGATTTTGCATT+TGG - chr2_1:54109481-54109500 Msa0212180:intron 45.0%
GCCAGCAAGAAAAGCTCATT+TGG + chr2_1:54109520-54109539 None:intergenic 45.0%
GGATCGTTCAACTTCTCACA+AGG - chr2_1:54109850-54109869 Msa0212180:intron 45.0%
CGTTCAACTTCTCACAAGGA+AGG - chr2_1:54109854-54109873 Msa0212180:intron 45.0%
GGCCTGTAACTGTAATTGCT+TGG + chr2_1:54109934-54109953 None:intergenic 45.0%
! TCCAAATGGGGCATTCTCAA+CGG - chr2_1:54110083-54110102 Msa0212180:intron 45.0%
ACCCAACTTTGTCCTCTCTT+TGG + chr2_1:54110177-54110196 None:intergenic 45.0%
CATTCTACACTCCTAGGTGA+AGG - chr2_1:54110231-54110250 Msa0212180:intron 45.0%
! TCCTAGGTGAAGGTGTATGT+GGG - chr2_1:54110241-54110260 Msa0212180:intron 45.0%
CAATCGGAGAATATTCGTCG+GGG + chr2_1:54110317-54110336 None:intergenic 45.0%
TTGTCAAGCAGGTGGGAATT+TGG - chr2_1:54110383-54110402 Msa0212180:CDS 45.0%
TGTCAAGCAGGTGGGAATTT+GGG - chr2_1:54110384-54110403 Msa0212180:CDS 45.0%
GTAAATGATCCGGCGGTAAA+AGG - chr2_1:54110594-54110613 Msa0212180:intron 45.0%
GAAACTAGACAAGCTGATCC+AGG - chr2_1:54110956-54110975 Msa0212180:intron 45.0%
GCTGATCCAGGATAGTGATA+AGG - chr2_1:54110968-54110987 Msa0212180:intron 45.0%
AGGAATCTTGTCCGTCTTCT+TGG - chr2_1:54111032-54111051 Msa0212180:intron 45.0%
! CGAAGGACAACATCGCATTT+TGG - chr2_1:54111064-54111083 Msa0212180:intron 45.0%
!! TTGACTCGTTGGTTCCAATC+TGG + chr2_1:54111146-54111165 None:intergenic 45.0%
!! CCAGGATAATGTTGACTCGT+TGG + chr2_1:54111157-54111176 None:intergenic 45.0%
CCAACGAGTCAACATTATCC+TGG - chr2_1:54111154-54111173 Msa0212180:intron 45.0%
ATTATCCTGGGGATTGCAAG+AGG - chr2_1:54111167-54111186 Msa0212180:intron 45.0%
!! AGGTCTTGTTTACTTGCACG+AGG - chr2_1:54111187-54111206 Msa0212180:intron 45.0%
!! GGTCTTGTTTACTTGCACGA+GGG - chr2_1:54111188-54111207 Msa0212180:intron 45.0%
!! GTCTTGTTTACTTGCACGAG+GGG - chr2_1:54111189-54111208 Msa0212180:intron 45.0%
ATCTGGTGCAACATACCCTT+TGG + chr2_1:54111357-54111376 None:intergenic 45.0%
! AAGGGTATGTTGCACCAGAT+TGG - chr2_1:54111357-54111376 Msa0212180:intron 45.0%
TAGCAACGACATGATGTGCT+TGG - chr2_1:54111571-54111590 Msa0212180:intron 45.0%
CCAAATAGATAGGGACTTGG+GGG + chr2_1:54111704-54111723 None:intergenic 45.0%
AACTAGTGGTCATGCTCCAA+TGG - chr2_1:54111945-54111964 Msa0212180:intron 45.0%
AACAGGAAGCTTCTGACCAT+TGG + chr2_1:54111964-54111983 None:intergenic 45.0%
CAACACTTCACGAGCTAGTT+GGG + chr2_1:54112312-54112331 None:intergenic 45.0%
ACAACACTTCACGAGCTAGT+TGG + chr2_1:54112313-54112332 None:intergenic 45.0%
!! CTAGCTCGTGAAGTGTTGTT+TGG - chr2_1:54112314-54112333 Msa0212180:five_prime_UTR 45.0%
GAAATGCTAACATGCCCGTT+AGG - chr2_1:54112546-54112565 Msa0212180:five_prime_UTR 45.0%
ACATGCCCGTTAGGGATTTA+AGG - chr2_1:54112555-54112574 Msa0212180:five_prime_UTR 45.0%
TTGTAGACCCTAAGATCCGT+GGG + chr2_1:54112965-54112984 None:intergenic 45.0%
! TTAATGCAGAACAAGCACCG+TGG + chr2_1:54113009-54113028 None:intergenic 45.0%
GAACTTAGCTCGCAAGTTTC+TGG + chr2_1:54113070-54113089 None:intergenic 45.0%
!! CAAAAAATTTAAAAAAATAA+AGG + chr2_1:54105991-54106010 None:intergenic 5.0%
! TGCTATGGTGGAGGTTGTCA+TGG + chr2_1:54097891-54097910 None:intergenic 50.0%
ACTGGAAGTTGCTATGGTGG+AGG + chr2_1:54097900-54097919 None:intergenic 50.0%
GTGACTGGAAGTTGCTATGG+TGG + chr2_1:54097903-54097922 None:intergenic 50.0%
GCAGTGACTGGAAGTTGCTA+TGG + chr2_1:54097906-54097925 None:intergenic 50.0%
GACGGAGAATTAGCAGTGAC+TGG + chr2_1:54097918-54097937 None:intergenic 50.0%
AGAGAGGAACTCAATGGTGG+CGG + chr2_1:54097962-54097981 None:intergenic 50.0%
GGAAGAGAGGAACTCAATGG+TGG + chr2_1:54097965-54097984 None:intergenic 50.0%
GGAGGAAGAGAGGAACTCAA+TGG + chr2_1:54097968-54097987 None:intergenic 50.0%
GAGAGGGAAAGTGGTGATTG+GGG + chr2_1:54098039-54098058 None:intergenic 50.0%
GCCGAAATTGAGAGGGAAAG+TGG + chr2_1:54098048-54098067 None:intergenic 50.0%
CATGGTGGCCGAAATTGAGA+GGG + chr2_1:54098055-54098074 None:intergenic 50.0%
TCATGGTGGCCGAAATTGAG+AGG + chr2_1:54098056-54098075 None:intergenic 50.0%
ACTTCCTATTAGGGCCTTGG+TGG - chr2_1:54098392-54098411 Msa0212180:intron 50.0%
AACCTCACGCGTGCATATCA+TGG + chr2_1:54098893-54098912 None:intergenic 50.0%
!!! GGGGCATCTTGGAAGCATTT+TGG - chr2_1:54098943-54098962 Msa0212180:intron 50.0%
ACGTTCTGTAGTTGCTACGC+GGG - chr2_1:54098985-54099004 Msa0212180:intron 50.0%
AGTTGCTACGCGGGAGAATT+CGG - chr2_1:54098994-54099013 Msa0212180:intron 50.0%
TGAAATAGGAGGCAAAGGGG+GGG - chr2_1:54099660-54099679 Msa0212180:intron 50.0%
AGTTAGGTTTGACTGGGGAG+AGG - chr2_1:54099703-54099722 Msa0212180:intron 50.0%
TTTGACTGGGGAGAGGATCA+GGG - chr2_1:54099710-54099729 Msa0212180:intron 50.0%
TCAGGGTCTCTCAAACACCT+TGG - chr2_1:54099727-54099746 Msa0212180:intron 50.0%
TTGGGTTCACCAACCAGCAA+TGG - chr2_1:54100067-54100086 Msa0212180:intron 50.0%
AGGAAGGTAGTCAGTCTGGT+TGG + chr2_1:54100135-54100154 None:intergenic 50.0%
GGATTAGAGATGGCTGTGGT+TGG - chr2_1:54100653-54100672 Msa0212180:intron 50.0%
TAGAGATGGCTGTGGTTGGT+AGG - chr2_1:54100657-54100676 Msa0212180:intron 50.0%
! AGAGATGGCTGTGGTTGGTA+GGG - chr2_1:54100658-54100677 Msa0212180:intron 50.0%
TAATCCGTCGCAGTTGGAGA+CGG + chr2_1:54101880-54101899 None:intergenic 50.0%
ACGGAATCAGAGACGGAACT+AGG + chr2_1:54102032-54102051 None:intergenic 50.0%
! GTCTGAGACGGAATCAGAGA+CGG + chr2_1:54102039-54102058 None:intergenic 50.0%
GCACGCGCTTGCTTAATTGA+AGG + chr2_1:54102482-54102501 None:intergenic 50.0%
AAGCACAGAACGTACAGACC+AGG - chr2_1:54102515-54102534 Msa0212180:intron 50.0%
TTGCCAAAGGGGGAGATTGT+TGG + chr2_1:54102618-54102637 None:intergenic 50.0%
TGAACTGATGATCCATGCCC+TGG + chr2_1:54103735-54103754 None:intergenic 50.0%
TGCTATGCTGGATGAGAGGA+AGG + chr2_1:54103765-54103784 None:intergenic 50.0%
CATGTGCTATGCTGGATGAG+AGG + chr2_1:54103769-54103788 None:intergenic 50.0%
GAAGGACACATGTGCTATGC+TGG + chr2_1:54103777-54103796 None:intergenic 50.0%
CACTCCTCAGACATTGCAAC+AGG + chr2_1:54104115-54104134 None:intergenic 50.0%
CCCAGTTTGCAGCTCCAATT+TGG - chr2_1:54104146-54104165 Msa0212180:intron 50.0%
!! TTTCTAGGTGTCGAAGGAGG+TGG + chr2_1:54104295-54104314 None:intergenic 50.0%
!! AGCTTTCTAGGTGTCGAAGG+AGG + chr2_1:54104298-54104317 None:intergenic 50.0%
! GTGATGGTGAAAGCTACTGC+TGG + chr2_1:54104754-54104773 None:intergenic 50.0%
GTTCCTTAGACACAGACCCT+TGG + chr2_1:54104928-54104947 None:intergenic 50.0%
GAGGATAGTGTCTCTGGTGA+TGG + chr2_1:54105027-54105046 None:intergenic 50.0%
GCTTTCTCCACAGTCCTTTC+GGG - chr2_1:54105057-54105076 Msa0212180:intron 50.0%
GCAACACCTAGTCGTGAGAA+AGG + chr2_1:54105375-54105394 None:intergenic 50.0%
! TGTCATGGTTAGGGCTTGCT+TGG - chr2_1:54105494-54105513 Msa0212180:intron 50.0%
! GTAGGAGAGACAGTGTTGAG+TGG - chr2_1:54105585-54105604 Msa0212180:intron 50.0%
CTTGACCATCTTAGGAGCAG+AGG - chr2_1:54105608-54105627 Msa0212180:intron 50.0%
CAGTTCCTCTGCTCCTAAGA+TGG + chr2_1:54105616-54105635 None:intergenic 50.0%
CATCTTAGGAGCAGAGGAAC+TGG - chr2_1:54105614-54105633 Msa0212180:intron 50.0%
! ACTGGTTTCACATTGAGCGG+CGG - chr2_1:54105632-54105651 Msa0212180:intron 50.0%
!! TGATTGCGGTTGGTAGAGAG+AGG - chr2_1:54105838-54105857 Msa0212180:intron 50.0%
!! GATTGCGGTTGGTAGAGAGA+GGG - chr2_1:54105839-54105858 Msa0212180:intron 50.0%
GATGGTAGGGGAGAAATACG+AGG + chr2_1:54106434-54106453 None:intergenic 50.0%
TCCCCTACCATCATCACCAA+AGG - chr2_1:54106442-54106461 Msa0212180:intron 50.0%
CCTGTGGCACTTGACAAAGA+TGG + chr2_1:54108030-54108049 None:intergenic 50.0%
CCATCTTTGTCAAGTGCCAC+AGG - chr2_1:54108027-54108046 Msa0212180:intron 50.0%
! TTGGTTCCATCTAGCACTGG+TGG - chr2_1:54108138-54108157 Msa0212180:intron 50.0%
AACAGACCACCAGTGCTAGA+TGG + chr2_1:54108147-54108166 None:intergenic 50.0%
GATCTCACCCAATAACAGGC+AGG - chr2_1:54108214-54108233 Msa0212180:intron 50.0%
! AGTGGATTTCCTTCCTGGCT+TGG + chr2_1:54108460-54108479 None:intergenic 50.0%
!! GCACTAGTGGATTTCCTTCC+TGG + chr2_1:54108465-54108484 None:intergenic 50.0%
CATACCAACACATGCTGGCA+TGG - chr2_1:54109097-54109116 Msa0212180:intron 50.0%
GAATCCATGCCAGCATGTGT+TGG + chr2_1:54109104-54109123 None:intergenic 50.0%
GCACGCGCTTGCTTAATTGA+AGG + chr2_1:54102482-54102501 None:intergenic 50.0%
CAGAACATACAGACCAGGTC+TGG - chr2_1:54109164-54109183 Msa0212180:intron 50.0%
TACAGACCAGGTCTGGTTGT+TGG - chr2_1:54109171-54109190 Msa0212180:intron 50.0%
GGTGAGTCACTTACTGCTTC+GGG - chr2_1:54109466-54109485 Msa0212180:intron 50.0%
TGGAGACAACCCTGCTTCTA+AGG - chr2_1:54109588-54109607 Msa0212180:intron 50.0%
GGAGACAACCCTGCTTCTAA+GGG - chr2_1:54109589-54109608 Msa0212180:intron 50.0%
! TTGGTGCTCACTAACCCTCA+AGG - chr2_1:54109643-54109662 Msa0212180:intron 50.0%
TCCGTTGAGAATGCCCCATT+TGG + chr2_1:54110087-54110106 None:intergenic 50.0%
! CTCCTAGGTGAAGGTGTATG+TGG - chr2_1:54110240-54110259 Msa0212180:intron 50.0%
ACCCACATACACCTTCACCT+AGG + chr2_1:54110245-54110264 None:intergenic 50.0%
! GGCAGGTACAATTTGGCCTT+TGG + chr2_1:54110296-54110315 None:intergenic 50.0%
GGTGCACTCCTAAACCAATC+TGG + chr2_1:54111374-54111393 None:intergenic 50.0%
CCCCCAAGTCCCTATCTATT+TGG - chr2_1:54111701-54111720 Msa0212180:intron 50.0%
GCATCTACTGGAATGTGCCT+AGG - chr2_1:54112194-54112213 Msa0212180:five_prime_UTR 50.0%
GTTGTAGACCCTAAGATCCG+TGG + chr2_1:54112966-54112985 None:intergenic 50.0%
GGTTGTCAAAGGAGGTCGGA+CGG + chr2_1:54097936-54097955 None:intergenic 55.0%
GTGGGGTTGTCAAAGGAGGT+CGG + chr2_1:54097940-54097959 None:intergenic 55.0%
!! AGGAACTCAATGGTGGCGGT+GGG + chr2_1:54097958-54097977 None:intergenic 55.0%
ATAGACGATTCCCAACGCGG+CGG + chr2_1:54098199-54098218 None:intergenic 55.0%
GGCATAGACGATTCCCAACG+CGG + chr2_1:54098202-54098221 None:intergenic 55.0%
! GCAAATCACGTTTTCCGGCG+TGG + chr2_1:54098223-54098242 None:intergenic 55.0%
CTCACGCGTGCATATCATGG+CGG + chr2_1:54098890-54098909 None:intergenic 55.0%
! TTTCACCTGGCGCTGGAGAA+AGG + chr2_1:54099577-54099596 None:intergenic 55.0%
AACACAGTTTCACCTGGCGC+TGG + chr2_1:54099584-54099603 None:intergenic 55.0%
GTTTGACTGGGGAGAGGATC+AGG - chr2_1:54099709-54099728 Msa0212180:intron 55.0%
GGGTCTCTCAAACACCTTGG+AGG - chr2_1:54099730-54099749 Msa0212180:intron 55.0%
CTCTGGTCAAGGAGATCCCA+TGG + chr2_1:54099781-54099800 None:intergenic 55.0%
AGCAGAACGGAAAGGACCTC+TGG - chr2_1:54099855-54099874 Msa0212180:intron 55.0%
GTGATCCGTCTCCGTAGAGA+CGG - chr2_1:54101772-54101791 Msa0212180:intron 55.0%
GTTTCCGTCTCCAACTGCGA+CGG - chr2_1:54101873-54101892 Msa0212180:intron 55.0%
GCAAGCGCGTGCGTAAACAT+AGG - chr2_1:54102490-54102509 Msa0212180:intron 55.0%
CAGAACGTACAGACCAGGTC+TGG - chr2_1:54102520-54102539 Msa0212180:intron 55.0%
TACCAGCTTCCTCTCCTTCC+AGG - chr2_1:54103714-54103733 Msa0212180:intron 55.0%
ACCAGCTTCCTCTCCTTCCA+GGG - chr2_1:54103715-54103734 Msa0212180:intron 55.0%
CTGATGATCCATGCCCTGGA+AGG + chr2_1:54103731-54103750 None:intergenic 55.0%
GCACGTCTTCAACCACCTGT+AGG - chr2_1:54104620-54104639 Msa0212180:intron 55.0%
! GATTGGTCCCGAAAGGACTG+TGG + chr2_1:54105067-54105086 None:intergenic 55.0%
CCGGATGTTAGCACATCCCT+GGG + chr2_1:54105171-54105190 None:intergenic 55.0%
CCCAGGGATGTGCTAACATC+CGG - chr2_1:54105168-54105187 Msa0212180:intron 55.0%
ACCGGATGTTAGCACATCCC+TGG + chr2_1:54105172-54105191 None:intergenic 55.0%
TCAGCTGTGTGACCAAGGTC+TGG + chr2_1:54106324-54106343 None:intergenic 55.0%
GTGAGTCAGCTGTGTGACCA+AGG + chr2_1:54106329-54106348 None:intergenic 55.0%
CAGGCACCCTGCCTGTTATT+GGG + chr2_1:54108224-54108243 None:intergenic 55.0%
AGGTGACGTTGCACCGAACT+GGG + chr2_1:54108424-54108443 None:intergenic 55.0%
TAGGTGACGTTGCACCGAAC+TGG + chr2_1:54108425-54108444 None:intergenic 55.0%
GGTGCAACGTCACCTACTCT+GGG - chr2_1:54108429-54108448 Msa0212180:intron 55.0%
GTGCAACGTCACCTACTCTG+GGG - chr2_1:54108430-54108449 Msa0212180:intron 55.0%
TGCAACGTCACCTACTCTGG+GGG - chr2_1:54108431-54108450 Msa0212180:intron 55.0%
GCAAGCGCGTGCGTAAACAT+AGG - chr2_1:54102490-54102509 Msa0212180:intron 55.0%
TCGTCGGGGCAGGTACAATT+TGG + chr2_1:54110303-54110322 None:intergenic 55.0%
CAAGACCTCTTGCAATCCCC+AGG + chr2_1:54111175-54111194 None:intergenic 55.0%
ACGAGTGTCCCACGGATCTT+AGG - chr2_1:54112954-54112973 Msa0212180:five_prime_UTR 55.0%
CGAGTGTCCCACGGATCTTA+GGG - chr2_1:54112955-54112974 Msa0212180:five_prime_UTR 55.0%
! AGTAAAGTGGTGGCGTGCCA+CGG - chr2_1:54112989-54113008 Msa0212180:five_prime_UTR 55.0%
!! GGAACTCAATGGTGGCGGTG+GGG + chr2_1:54097957-54097976 None:intergenic 60.0%
!! GAGGAACTCAATGGTGGCGG+TGG + chr2_1:54097959-54097978 None:intergenic 60.0%
TTCACTGGTGACCACCCTGC+CGG - chr2_1:54098164-54098183 Msa0212180:intron 60.0%
GGGAATCGTCTATGCCACGC+CGG - chr2_1:54098206-54098225 Msa0212180:intron 60.0%
CGCCATGATATGCACGCGTG+AGG - chr2_1:54098888-54098907 Msa0212180:intron 60.0%
! ACTTTGGCTCCGGGGCATCT+TGG - chr2_1:54098932-54098951 Msa0212180:intron 60.0%
CAACTCCTTTCTCCAGCGCC+AGG - chr2_1:54099569-54099588 Msa0212180:intron 60.0%
AGGCAAAGGGGGGGTTGTAG+AGG - chr2_1:54099669-54099688 Msa0212180:intron 60.0%
CAAAGGGGGGGTTGTAGAGG+AGG - chr2_1:54099672-54099691 Msa0212180:intron 60.0%
AGCATCTGGGAGCAGCTCTG+AGG + chr2_1:54103606-54103625 None:intergenic 60.0%
CTTCCTCTCCTTCCAGGGCA+TGG - chr2_1:54103720-54103739 Msa0212180:intron 60.0%
GATCCATGCCCTGGAAGGAG+AGG + chr2_1:54103726-54103745 None:intergenic 60.0%
! TGTCGAAGGAGGTGGTGCTG+AGG + chr2_1:54104287-54104306 None:intergenic 60.0%
GCTGTGTGACCAAGGTCTGG+AGG + chr2_1:54106321-54106340 None:intergenic 60.0%
GCAGGCACCCTGCCTGTTAT+TGG + chr2_1:54108225-54108244 None:intergenic 60.0%
CGGTGCAACGTCACCTACTC+TGG - chr2_1:54108428-54108447 Msa0212180:intron 60.0%
CGGAGAATATTCGTCGGGGC+AGG + chr2_1:54110313-54110332 None:intergenic 60.0%
GGCGGTGGGGTTGTCAAAGG+AGG + chr2_1:54097944-54097963 None:intergenic 65.0%
! GGTGGCGGTGGGGTTGTCAA+AGG + chr2_1:54097947-54097966 None:intergenic 65.0%
! AACGCGGCGGAGGTTAGCTC+CGG + chr2_1:54098186-54098205 None:intergenic 65.0%
GAGCTAACCTCCGCCGCGTT+GGG - chr2_1:54098186-54098205 Msa0212180:intron 65.0%
GCCCTGGAAGGAGAGGAAGC+TGG + chr2_1:54103719-54103738 None:intergenic 65.0%
! CGAAGGAGGTGGTGCTGAGG+TGG + chr2_1:54104284-54104303 None:intergenic 65.0%
! GGCTTGGTAGCCCCCAGAGT+AGG + chr2_1:54108444-54108463 None:intergenic 65.0%
! ACTCTGGGGGCTACCAAGCC+AGG - chr2_1:54108444-54108463 Msa0212180:intron 65.0%
TGGGGGCTACCAAGCCAGGA+AGG - chr2_1:54108448-54108467 Msa0212180:intron 65.0%
! GGAGGTTAGCTCCGGCAGGG+TGG + chr2_1:54098178-54098197 None:intergenic 70.0%
! GGCGGAGGTTAGCTCCGGCA+GGG + chr2_1:54098181-54098200 None:intergenic 70.0%
GGAGCTAACCTCCGCCGCGT+TGG - chr2_1:54098185-54098204 Msa0212180:intron 70.0%
GACGATTCCCAACGCGGCGG+AGG + chr2_1:54098196-54098215 None:intergenic 70.0%
! CGGCGGAGGTTAGCTCCGGC+AGG + chr2_1:54098182-54098201 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 54097769 54113282 54097769 ID=Msa0212180;Name=Msa0212180
chr2_1 mRNA 54097769 54113282 54097769 ID=Msa0212180-mRNA-1;Parent=Msa0212180;Name=Msa0212180-mRNA-1;_AED=0.29;_eAED=0.31;_QI=1123|0.16|0.28|1|0.16|0.14|7|0|442
chr2_1 exon 54097769 54098014 54097769 ID=Msa0212180-mRNA-1:exon:15005;Parent=Msa0212180-mRNA-1
chr2_1 exon 54100326 54100495 54100326 ID=Msa0212180-mRNA-1:exon:15004;Parent=Msa0212180-mRNA-1
chr2_1 exon 54100799 54101017 54100799 ID=Msa0212180-mRNA-1:exon:15003;Parent=Msa0212180-mRNA-1
chr2_1 exon 54101108 54101353 54101108 ID=Msa0212180-mRNA-1:exon:15002;Parent=Msa0212180-mRNA-1
chr2_1 exon 54101387 54101614 54101387 ID=Msa0212180-mRNA-1:exon:15001;Parent=Msa0212180-mRNA-1
chr2_1 exon 54110341 54110423 54110341 ID=Msa0212180-mRNA-1:exon:15000;Parent=Msa0212180-mRNA-1
chr2_1 exon 54112023 54113282 54112023 ID=Msa0212180-mRNA-1:exon:14999;Parent=Msa0212180-mRNA-1
chr2_1 five_prime_UTR 54112160 54113282 54112160 ID=Msa0212180-mRNA-1:five_prime_utr;Parent=Msa0212180-mRNA-1
chr2_1 CDS 54112023 54112159 54112023 ID=Msa0212180-mRNA-1:cds;Parent=Msa0212180-mRNA-1
chr2_1 CDS 54110341 54110423 54110341 ID=Msa0212180-mRNA-1:cds;Parent=Msa0212180-mRNA-1
chr2_1 CDS 54101387 54101614 54101387 ID=Msa0212180-mRNA-1:cds;Parent=Msa0212180-mRNA-1
chr2_1 CDS 54101108 54101353 54101108 ID=Msa0212180-mRNA-1:cds;Parent=Msa0212180-mRNA-1
chr2_1 CDS 54100799 54101017 54100799 ID=Msa0212180-mRNA-1:cds;Parent=Msa0212180-mRNA-1
chr2_1 CDS 54100326 54100495 54100326 ID=Msa0212180-mRNA-1:cds;Parent=Msa0212180-mRNA-1
chr2_1 CDS 54097769 54098014 54097769 ID=Msa0212180-mRNA-1:cds;Parent=Msa0212180-mRNA-1
Gene Sequence

>Msa0212180

ATGATATGCACGCGTGAGGTTTCCCCGATTGACTATAATAACTTTGGCTCCGGGGCATCTTGGAAGCATTTTGGAATCAAAGCAGTGAAGTCAACGTTCTGTAGTTGCTACGCGGGAGAATTCGGTAAAGTATTAAGATTTTGCCTTATGGAATTGAAACTTGGATTAGAGATGGCTGTGGTTGGTAGGGAATTGAAACTTGGATTAGAGAACTTGAGAGCATCATTGGATCAAGGTGTAATTGTTGTTGGTGAGTCACTTACTGCTTCGGGAGATTTTGCATTTGGATTTTACCAACTTCCAAATGAGCTTTTCTTGCTGGCTATATGGTATGACAAGATACAAGATGATGCCATCATTTGGTATGCAAATGGAGACAACCCTGCTTCTAAGGGATCAAGATTGATATTAAATGATTCTCGTGGTTTGGTGCTCACTAACCCTCAAGGTACAATTTCTAATGGTCTAATGAATGATGATGGAAACTTTCAATTGCGAGACAAAAATAATGAGACATTATGGGATAGTTTCAGTCATCCTACTGACACATTAGTACCGAATCAAGTAATGGTGTTGAATGGAAATCTTTCTTCACGACAAGGATCGTTCAACTTCTCACAAGGAAGGTTTAAACTTCATCTACAAGAGGATGGGAATCTTGTGCTCAACCTTATAAATTTGCCAAGCAATTACAGTTTCTTATACATTGCAAAAAAAGGAGGGGATAACTTTTCTATCAGCAATCCAAATGGGGCATTCTCAACGGATGATTTCTACTACAAAGCAACTATTAATTTTGATGGAGTTTTCACCATTGCATTTTACCCTAAAGATCCAAAGAGAGGACAAAGTTGGGTCACTGCAAAGACTATACCAGAAAACATATGTTTGCATTCTACACTCCTAGGTGAAGGTTCTTGTTTTAAAAAGAAGCTTCCACTATCTTATGGTGTAAATGATCCGGCGGTAAAAGGTATTTCTATCATGAAATTGATGAAAAGTGATCATTTGTCCTCCTTGTCAGAAGAGAAGAAAGATCATGATACTTTGGTCATTGTGATTTCAGTTCTTTTGGGAAGCTCGCGTTTTTGTTGCGTTGGAAAATATTCATCTCCAGAAACTTGCGAGCTAAGTTCTTACTCTCTTGCATTCAAGAGGGCTTGTCCTGATGCTTATAGCTATCCTTACGATTATGGGACGAAAACATTTAGTTGTTCATGTGAAAGTTATGACATTATATTTTGTCCACTTTCCAAAAAGACAATAAAACCAAAAAGTATTTGTGGCAAAGACAATACCAGAAAACATTTGTTTAAATTCTACATTTAA
Protein sequence

>Msa0212180

MICTREVSPIDYNNFGSGASWKHFGIKAVKSTFCSCYAGEFGKVLRFCLMELKLGLEMAVVGRELKLGLENLRASLDQGVIVVGESLTASGDFAFGFYQLPNELFLLAIWYDKIQDDAIIWYANGDNPASKGSRLILNDSRGLVLTNPQGTISNGLMNDDGNFQLRDKNNETLWDSFSHPTDTLVPNQVMVLNGNLSSRQGSFNFSQGRFKLHLQEDGNLVLNLINLPSNYSFLYIAKKGGDNFSISNPNGAFSTDDFYYKATINFDGVFTIAFYPKDPKRGQSWVTAKTIPENICLHSTLLGEGSCFKKKLPLSYGVNDPAVKGISIMKLMKSDHLSSLSEEKKDHDTLVIVISVLLGSSRFCCVGKYSSPETCELSSYSLAFKRACPDAYSYPYDYGTKTFSCSCESYDIIFCPLSKKTIKPKSICGKDNTRKHLFKFYI*