AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1049950

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1049950 MtrunA17_Chr7g0218791 93.960 447 26 1 1 447 1 446 0.0 861
Msa1049950 MtrunA17_Chr7g0218831 57.528 445 176 4 4 445 5 439 0.0 544
Msa1049950 MtrunA17_Chr7g0218821 57.930 454 180 6 1 446 1 451 0.0 540
Msa1049950 MtrunA17_Chr7g0218811 58.259 448 175 5 1 445 11 449 0.0 537
Msa1049950 MtrunA17_Chr7g0218841 57.399 446 176 5 4 445 5 440 0.0 533
Msa1049950 MtrunA17_Chr2g0278711 31.868 455 257 15 4 422 10 447 3.10e-69 227
Msa1049950 MtrunA17_Chr3g0118671 31.042 480 276 12 5 446 6 468 4.14e-69 227
Msa1049950 MtrunA17_Chr6g0454341 31.288 489 274 14 1 442 1 474 6.25e-69 226
Msa1049950 MtrunA17_Chr3g0078841 30.353 481 285 12 4 447 9 476 6.73e-69 226
Msa1049950 MtrunA17_Chr3g0118771 31.393 481 271 15 4 444 20 481 1.18e-67 224
Msa1049950 MtrunA17_Chr3g0118691 31.250 480 282 15 4 447 14 481 1.94e-67 223
Msa1049950 MtrunA17_Chr3g0118661 30.385 441 261 10 4 411 12 439 2.47e-67 223
Msa1049950 MtrunA17_Chr6g0454401 29.876 482 282 14 4 442 9 477 4.06e-67 222
Msa1049950 MtrunA17_Chr8g0336331 31.169 462 270 11 5 433 10 456 5.18e-67 221
Msa1049950 MtrunA17_Chr3g0118711 31.778 450 270 13 4 424 12 453 2.81e-66 220
Msa1049950 MtrunA17_Chr5g0414331 31.692 467 269 15 3 444 11 452 9.05e-66 218
Msa1049950 MtrunA17_Chr6g0464871 31.897 464 267 12 5 442 23 463 2.31e-65 217
Msa1049950 MtrunA17_Chr6g0454191 30.085 472 278 12 4 438 9 465 2.86e-65 217
Msa1049950 MtrunA17_Chr5g0414321 30.968 465 273 14 3 443 9 449 3.23e-65 216
Msa1049950 MtrunA17_Chr6g0454211 30.556 468 274 12 4 435 296 748 4.72e-65 223
Msa1049950 MtrunA17_Chr6g0454211 36.875 160 61 5 218 365 105 236 4.12e-22 99.4
Msa1049950 MtrunA17_Chr3g0118701 29.854 479 285 14 4 446 14 477 5.77e-65 216
Msa1049950 MtrunA17_Chr4g0053501 31.712 473 272 16 3 443 9 462 3.18e-64 215
Msa1049950 MtrunA17_Chr6g0464841 32.251 462 268 11 5 442 11 451 4.93e-64 213
Msa1049950 MtrunA17_Chr5g0426431 30.968 465 271 13 5 434 12 461 6.07e-64 213
Msa1049950 MtrunA17_Chr6g0454321 29.550 467 279 14 5 434 10 463 6.27e-64 218
Msa1049950 MtrunA17_Chr6g0454331 30.041 486 279 14 4 443 6 476 1.05e-63 213
Msa1049950 MtrunA17_Chr6g0454181 29.645 479 288 12 4 446 9 474 1.28e-63 213
Msa1049950 MtrunA17_Chr6g0464881 29.060 468 279 12 4 443 10 452 2.37e-63 211
Msa1049950 MtrunA17_Chr6g0453951 29.185 466 279 11 4 433 56 506 6.59e-63 212
Msa1049950 MtrunA17_Chr6g0454361 30.290 482 281 14 4 443 10 478 1.85e-62 210
Msa1049950 MtrunA17_Chr7g0217881 30.870 460 267 15 4 437 9 443 2.06e-62 209
Msa1049950 MtrunA17_Chr8g0359821 29.851 469 274 13 4 435 9 459 1.91e-61 207
Msa1049950 MtrunA17_Chr6g0464861 31.489 470 262 13 4 442 10 450 2.34e-61 206
Msa1049950 MtrunA17_Chr6g0454131 30.705 482 276 13 4 442 9 475 3.33e-61 206
Msa1049950 MtrunA17_Chr5g0448551 31.140 456 280 15 1 442 3 438 4.02e-61 205
Msa1049950 MtrunA17_Chr8g0380531 30.426 470 284 12 3 447 8 459 5.91e-61 205
Msa1049950 MtrunA17_Chr6g0454121 30.705 482 276 11 4 442 9 475 8.81e-61 205
Msa1049950 MtrunA17_Chr7g0249981 30.388 464 274 15 5 443 25 464 9.29e-61 205
Msa1049950 MtrunA17_Chr6g0454261 29.701 468 278 14 4 435 9 461 3.57e-60 204
Msa1049950 MtrunA17_Chr3g0092641 29.787 470 272 13 4 434 11 461 3.77e-60 203
Msa1049950 MtrunA17_Chr6g0454151 28.998 469 284 12 4 438 9 462 1.42e-59 202
Msa1049950 MtrunA17_Chr7g0250001 31.034 464 271 14 5 443 6 445 3.00e-59 201
Msa1049950 MtrunA17_Chr6g0464921 28.632 468 282 13 4 443 10 453 4.80e-59 200
Msa1049950 MtrunA17_Chr6g0454291 30.128 468 276 13 4 435 6 458 5.23e-59 200
Msa1049950 MtrunA17_Chr6g0454201 30.769 468 273 13 4 435 10 462 9.26e-59 200
Msa1049950 MtrunA17_Chr6g0454301 29.363 487 286 13 1 442 254 727 1.32e-58 204
Msa1049950 MtrunA17_Chr6g0454301 37.156 218 120 5 232 438 3 214 1.85e-40 154
Msa1049950 MtrunA17_Chr3g0098111 30.213 470 284 17 5 442 9 466 1.49e-58 199
Msa1049950 MtrunA17_Chr7g0249931 30.258 466 274 16 5 443 40 481 1.58e-58 199
Msa1049950 MtrunA17_Chr1g0207971 29.870 462 281 14 5 442 8 450 2.20e-58 198
Msa1049950 MtrunA17_Chr3g0118751 29.622 476 257 14 4 444 5 437 9.82e-58 196
Msa1049950 MtrunA17_Chr1g0207861 31.306 444 265 15 2 418 5 435 4.67e-57 195
Msa1049950 MtrunA17_Chr8g0377921 30.021 473 285 15 4 443 2 461 5.09e-57 195
Msa1049950 MtrunA17_Chr6g0453961 28.542 480 291 13 4 442 18 486 5.95e-57 195
Msa1049950 MtrunA17_Chr6g0454141 29.278 485 280 16 4 442 9 476 7.70e-57 195
Msa1049950 MtrunA17_Chr4g0053321 29.299 471 286 14 3 443 24 477 1.03e-56 195
Msa1049950 MtrunA17_Chr6g0454251 30.576 399 232 9 4 366 6 395 2.19e-56 191
Msa1049950 MtrunA17_Chr4g0050341 29.087 471 277 15 4 434 18 471 2.35e-56 194
Msa1049950 MtrunA17_Chr1g0161351 31.469 429 252 16 5 405 37 451 4.86e-56 193
Msa1049950 MtrunA17_Chr6g0452771 29.087 471 283 11 4 438 9 464 2.58e-55 191
Msa1049950 MtrunA17_Chr5g0423981 29.221 462 265 14 4 441 9 432 9.11e-55 188
Msa1049950 MtrunA17_Chr3g0121991 29.876 482 282 15 3 443 77 543 1.48e-54 190
Msa1049950 MtrunA17_Chr1g0207981 28.051 467 299 15 5 443 13 470 1.77e-54 188
Msa1049950 MtrunA17_Chr1g0207951 32.906 468 266 20 5 442 656 1105 2.67e-54 195
Msa1049950 MtrunA17_Chr1g0207951 29.025 472 283 13 5 447 124 572 3.80e-53 192
Msa1049950 MtrunA17_Chr8g0365811 30.282 426 267 12 5 405 9 429 7.95e-54 193
Msa1049950 MtrunA17_Chr8g0365811 29.167 480 274 16 7 442 497 954 1.23e-53 192
Msa1049950 MtrunA17_Chr3g0112761 31.828 443 252 16 5 423 8 424 8.15e-54 186
Msa1049950 MtrunA17_Chr6g0454351 26.824 466 273 12 4 433 11 444 7.27e-51 179
Msa1049950 MtrunA17_Chr3g0122001 28.778 483 286 14 3 443 484 950 4.48e-50 182
Msa1049950 MtrunA17_Chr3g0122001 28.074 488 284 15 3 443 4 471 9.08e-47 173
Msa1049950 MtrunA17_Chr8g0347271 32.222 450 248 18 4 419 18 444 1.23e-49 176
Msa1049950 MtrunA17_Chr8g0377941 28.448 464 292 13 7 443 9 459 1.75e-49 175
Msa1049950 MtrunA17_Chr3g0112771 29.864 442 256 15 7 423 14 426 4.87e-49 173
Msa1049950 MtrunA17_Chr8g0347281 31.264 451 251 19 4 419 17 443 6.37e-49 174
Msa1049950 MtrunA17_Chr4g0032331 29.372 446 261 16 5 423 8 426 1.19e-48 172
Msa1049950 MtrunA17_Chr5g0401721 29.158 463 282 16 15 443 18 468 4.19e-48 171
Msa1049950 MtrunA17_Chr1g0207831 30.444 473 272 17 6 442 9 460 4.78e-48 171
Msa1049950 MtrunA17_Chr3g0118721 39.256 242 121 8 216 438 40 274 7.62e-48 166
Msa1049950 MtrunA17_Chr5g0412131 29.263 475 276 16 4 441 11 462 4.10e-47 169
Msa1049950 MtrunA17_Chr5g0431441 28.294 463 280 16 5 439 18 456 1.20e-46 167
Msa1049950 MtrunA17_Chr6g0486251 27.350 468 267 12 9 430 10 450 1.62e-46 167
Msa1049950 MtrunA17_Chr6g0486201 27.350 468 267 12 9 430 10 450 1.62e-46 167
Msa1049950 MtrunA17_Chr5g0412111 27.883 477 298 13 1 446 1 462 1.98e-46 166
Msa1049950 MtrunA17_Chr6g0459311 28.352 455 279 10 9 430 17 457 2.20e-46 167
Msa1049950 MtrunA17_Chr7g0243681 28.392 479 286 13 5 442 11 473 3.72e-46 166
Msa1049950 MtrunA17_Chr7g0243631 29.448 489 283 17 5 447 13 485 3.92e-46 166
Msa1049950 MtrunA17_Chr6g0454221 39.738 229 116 7 232 442 3 227 1.05e-45 160
Msa1049950 MtrunA17_Chr6g0454271 38.136 236 125 7 215 435 39 268 5.37e-45 158
Msa1049950 MtrunA17_Chr7g0275511 27.331 472 300 14 4 445 14 472 6.25e-45 163
Msa1049950 MtrunA17_Chr5g0431361 27.371 464 288 15 5 443 12 451 1.32e-44 161
Msa1049950 MtrunA17_Chr7g0243871 28.632 475 287 14 9 447 13 471 1.35e-44 162
Msa1049950 MtrunA17_Chr8g0336741 28.894 443 269 12 2 415 10 435 2.70e-44 161
Msa1049950 MtrunA17_Chr7g0232391 28.571 476 290 13 5 447 6 464 3.95e-44 160
Msa1049950 MtrunA17_Chr7g0232401 26.786 448 280 10 5 419 6 438 5.42e-44 160
Msa1049950 MtrunA17_Chr8g0335141 29.474 475 259 16 4 430 8 454 8.83e-44 159
Msa1049950 MtrunA17_Chr8g0336651 28.898 481 276 13 5 443 781 1237 1.36e-43 164
Msa1049950 MtrunA17_Chr8g0336651 29.773 440 263 13 5 415 6 428 6.08e-38 147
Msa1049950 MtrunA17_Chr8g0336651 34.630 257 136 5 199 443 532 768 2.25e-37 145
Msa1049950 MtrunA17_Chr7g0232331 29.032 465 278 16 5 434 6 453 1.57e-43 159
Msa1049950 MtrunA17_Chr7g0275681 28.810 479 281 17 4 439 11 472 2.06e-43 159
Msa1049950 MtrunA17_Chr5g0412101 28.298 470 292 14 2 441 9 463 3.05e-43 158
Msa1049950 MtrunA17_Chr7g0265041 28.364 483 276 17 4 434 10 474 4.18e-43 158
Msa1049950 MtrunA17_Chr4g0060511 26.749 486 303 15 5 447 11 486 7.61e-43 157
Msa1049950 MtrunA17_Chr5g0393591 25.439 456 284 13 5 443 17 433 2.02e-42 155
Msa1049950 MtrunA17_Chr7g0243771 28.008 482 295 16 5 447 6 474 4.63e-42 155
Msa1049950 MtrunA17_Chr8g0335161 29.464 448 248 19 9 415 10 430 6.13e-42 154
Msa1049950 MtrunA17_Chr7g0232341 29.571 443 261 13 5 415 6 429 6.99e-42 154
Msa1049950 MtrunA17_Chr5g0431371 26.395 466 287 14 5 443 10 446 7.97e-42 154
Msa1049950 MtrunA17_Chr6g0449931 30.248 443 266 15 5 418 6 434 9.24e-42 154
Msa1049950 MtrunA17_Chr7g0243931 26.694 487 299 15 5 447 17 489 1.08e-41 154
Msa1049950 MtrunA17_Chr8g0336691 27.389 471 294 12 5 443 13 467 1.97e-41 157
Msa1049950 MtrunA17_Chr8g0336691 28.009 457 281 12 5 443 480 906 1.01e-39 152
Msa1049950 MtrunA17_Chr8g0336691 27.460 437 279 11 5 415 919 1343 2.22e-38 148
Msa1049950 MtrunA17_Chr8g0334861 29.095 464 276 17 5 435 6 449 2.66e-41 153
Msa1049950 MtrunA17_Chr5g0431401 27.409 467 281 17 5 443 10 446 4.40e-41 152
Msa1049950 MtrunA17_Chr7g0249961 35.808 229 126 6 232 443 33 257 4.76e-41 147
Msa1049950 MtrunA17_Chr1g0153451 29.019 479 273 18 5 443 6 457 6.88e-41 152
Msa1049950 MtrunA17_Chr8g0373301 27.571 457 261 17 5 419 9 437 8.40e-41 151
Msa1049950 MtrunA17_Chr5g0426401 38.028 213 113 5 232 430 84 291 9.52e-41 147
Msa1049950 MtrunA17_Chr7g0243861 27.105 487 297 11 5 447 14 486 1.21e-40 151
Msa1049950 MtrunA17_Chr6g0454171 36.667 240 111 7 218 438 77 294 2.44e-40 146
Msa1049950 MtrunA17_Chr7g0235051 26.552 467 284 12 5 442 11 447 2.68e-40 150
Msa1049950 MtrunA17_Chr7g0232411 27.966 472 289 14 5 441 6 461 2.80e-40 150
Msa1049950 MtrunA17_Chr7g0243951 27.926 487 292 16 5 447 11 482 2.81e-40 150
Msa1049950 MtrunA17_Chr7g0243801 27.615 478 294 16 9 447 11 475 3.29e-40 150
Msa1049950 MtrunA17_Chr8g0334851 26.846 447 283 11 5 419 6 440 5.55e-40 149
Msa1049950 MtrunA17_Chr3g0106231 29.195 435 259 16 5 422 18 420 1.03e-39 148
Msa1049950 MtrunA17_Chr1g0207931 39.216 204 106 7 236 422 269 471 2.93e-39 148
Msa1049950 MtrunA17_Chr5g0431421 26.767 467 284 15 5 443 10 446 3.84e-39 146
Msa1049950 MtrunA17_Chr5g0419761 26.907 472 287 14 3 429 7 465 5.31e-39 147
Msa1049950 MtrunA17_Chr8g0339461 30.481 374 208 11 113 447 110 470 5.84e-39 146
Msa1049950 MtrunA17_Chr7g0265051 28.221 489 266 19 5 436 9 469 6.79e-39 147
Msa1049950 MtrunA17_Chr1g0173121 26.923 468 267 17 7 434 16 448 7.95e-39 146
Msa1049950 MtrunA17_Chr4g0072761 26.304 441 275 12 5 423 15 427 1.21e-38 145
Msa1049950 MtrunA17_Chr8g0339451 31.880 367 184 12 113 433 102 448 1.89e-38 145
Msa1049950 MtrunA17_Chr7g0265101 27.664 488 272 18 5 436 9 471 2.07e-38 145
Msa1049950 MtrunA17_Chr8g0336731 30.769 377 230 11 62 415 86 454 3.02e-38 145
Msa1049950 MtrunA17_Chr1g0179901 26.572 493 299 18 1 446 12 488 3.85e-38 144
Msa1049950 MtrunA17_Chr7g0232311 26.622 447 269 13 4 415 5 427 4.72e-38 144
Msa1049950 MtrunA17_Chr1g0159551 28.571 462 258 18 10 434 19 445 4.93e-38 144
Msa1049950 MtrunA17_Chr7g0265151 26.722 479 284 15 5 434 9 469 6.03e-38 144
Msa1049950 MtrunA17_Chr4g0044511 26.176 489 282 16 5 443 40 499 7.01e-38 144
Msa1049950 MtrunA17_Chr7g0243761 29.306 447 252 16 3 404 8 435 8.53e-38 143
Msa1049950 MtrunA17_Chr7g0243781 28.216 482 273 18 9 442 13 469 9.47e-38 143
Msa1049950 MtrunA17_Chr4g0066281 29.140 477 274 17 6 443 13 464 1.96e-37 142
Msa1049950 MtrunA17_Chr5g0419771 27.292 480 290 18 1 434 32 498 2.42e-37 142
Msa1049950 MtrunA17_Chr5g0440421 26.667 480 294 16 4 436 9 477 2.71e-37 142
Msa1049950 MtrunA17_Chr8g0355011 28.743 334 181 8 113 429 46 339 3.85e-37 139
Msa1049950 MtrunA17_Chr4g0066261 28.364 483 286 18 5 443 13 479 5.56e-37 141
Msa1049950 MtrunA17_Chr4g0011051 27.593 482 277 18 5 433 9 471 5.86e-37 141
Msa1049950 MtrunA17_Chr4g0066221 28.601 486 277 19 5 443 13 475 1.17e-36 140
Msa1049950 MtrunA17_Chr5g0429711 26.106 452 292 15 3 430 9 442 1.25e-36 140
Msa1049950 MtrunA17_Chr8g0339601 34.256 289 133 10 174 419 27 301 1.52e-36 137
Msa1049950 MtrunA17_Chr8g0339631 29.167 408 239 14 62 433 60 453 2.55e-36 139
Msa1049950 MtrunA17_Chr8g0355221 26.383 470 283 16 9 433 19 470 2.58e-36 139
Msa1049950 MtrunA17_Chr2g0307961 27.802 464 294 12 3 438 11 461 3.08e-36 139
Msa1049950 MtrunA17_Chr5g0442581 23.819 487 303 15 1 439 1 467 1.86e-35 137
Msa1049950 MtrunA17_Chr5g0442541 24.587 484 305 16 1 444 1 464 1.90e-35 137
Msa1049950 MtrunA17_Chr7g0265141 28.340 494 280 18 5 443 9 483 2.87e-35 136
Msa1049950 MtrunA17_Chr4g0072771 25.163 461 294 14 5 441 25 458 1.27e-34 134
Msa1049950 MtrunA17_Chr4g0040691 27.294 436 283 12 5 422 8 427 1.44e-34 134
Msa1049950 MtrunA17_Chr5g0403641 34.211 228 121 6 236 441 268 488 1.71e-34 134
Msa1049950 MtrunA17_Chr5g0442521 22.691 498 307 15 1 444 1 474 2.31e-34 134
Msa1049950 MtrunA17_Chr1g0153461 35.784 204 113 4 258 443 3 206 2.68e-34 127
Msa1049950 MtrunA17_Chr8g0361371 25.110 454 297 13 9 434 11 449 4.47e-34 133
Msa1049950 MtrunA17_Chr4g0044501 27.447 470 285 16 3 433 7 459 5.10e-34 133
Msa1049950 MtrunA17_Chr6g0462541 33.028 218 130 5 231 438 242 453 5.49e-34 132
Msa1049950 MtrunA17_Chr6g0462571 29.457 258 155 6 202 438 200 451 6.46e-34 132
Msa1049950 MtrunA17_Chr6g0462551 33.484 221 128 6 231 438 240 454 6.57e-34 132
Msa1049950 MtrunA17_Chr4g0044521 26.509 464 274 17 10 433 14 450 1.22e-33 131
Msa1049950 MtrunA17_Chr1g0207881 27.371 464 221 15 5 442 8 381 1.25e-33 130
Msa1049950 MtrunA17_Chr8g0339441 41.081 185 85 4 258 419 217 400 1.40e-33 130
Msa1049950 MtrunA17_Chr5g0442601 22.363 474 316 13 1 434 400 861 1.41e-33 134
Msa1049950 MtrunA17_Chr5g0442601 24.684 316 189 8 98 386 43 336 6.04e-23 102
Msa1049950 MtrunA17_Chr4g0040711 26.879 439 281 12 5 422 8 427 3.85e-33 130
Msa1049950 MtrunA17_Chr1g0165701 25.747 435 280 11 9 411 19 442 4.48e-33 130
Msa1049950 MtrunA17_Chr4g0014061 25.949 474 285 16 9 439 13 463 6.39e-33 130
Msa1049950 MtrunA17_Chr8g0336251 25.424 472 309 12 5 447 7 464 1.01e-32 129
Msa1049950 MtrunA17_Chr4g0066151 27.673 477 282 19 9 443 22 477 1.03e-32 129
Msa1049950 MtrunA17_Chr4g0066201 26.059 472 291 17 9 443 22 472 1.11e-32 129
Msa1049950 MtrunA17_Chr8g0366391 26.316 475 291 17 3 435 6 463 1.19e-32 129
Msa1049950 MtrunA17_Chr5g0416741 24.678 466 288 14 3 423 11 458 1.87e-32 129
Msa1049950 MtrunA17_Chr8g0374931 27.178 482 288 19 5 442 13 475 2.03e-32 128
Msa1049950 MtrunA17_Chr7g0265111 38.265 196 101 5 259 434 306 501 2.39e-32 129
Msa1049950 MtrunA17_Chr6g0463891 26.050 476 289 14 3 436 10 464 2.41e-32 128
Msa1049950 MtrunA17_Chr5g0442561 22.904 489 314 17 1 444 1 471 4.83e-32 127
Msa1049950 MtrunA17_Chr2g0329111 27.101 476 281 19 7 437 8 462 5.08e-32 127
Msa1049950 MtrunA17_Chr5g0442491 22.428 486 306 15 9 444 9 473 5.78e-32 127
Msa1049950 MtrunA17_Chr8g0336321 25.212 472 310 12 5 447 7 464 5.87e-32 127
Msa1049950 MtrunA17_Chr3g0079731 32.068 237 137 6 232 446 244 478 5.96e-32 127
Msa1049950 MtrunA17_Chr7g0250021 28.655 342 202 12 5 328 12 329 7.22e-32 124
Msa1049950 MtrunA17_Chr5g0432731 31.835 267 148 8 201 443 38 294 9.98e-32 123
Msa1049950 MtrunA17_Chr8g0336261 43.885 139 71 3 283 418 3 137 1.05e-31 118
Msa1049950 MtrunA17_Chr7g0243811 28.244 393 239 14 17 386 1 373 1.69e-31 124
Msa1049950 MtrunA17_Chr6g0462521 30.973 226 140 5 231 446 229 448 2.09e-31 125
Msa1049950 MtrunA17_Chr4g0066171 27.021 470 296 16 9 447 25 478 2.38e-31 125
Msa1049950 MtrunA17_Chr7g0241801 24.612 451 281 15 5 440 9 415 2.90e-31 124
Msa1049950 MtrunA17_Chr5g0428081 26.415 477 296 15 5 442 13 473 3.01e-31 125
Msa1049950 MtrunA17_Chr5g0401851 24.893 466 289 14 9 429 14 463 3.08e-31 125
Msa1049950 MtrunA17_Chr5g0409591 34.259 216 110 5 237 420 240 455 3.69e-31 125
Msa1049950 MtrunA17_Chr8g0334831 24.512 461 297 13 9 433 10 455 3.76e-31 125
Msa1049950 MtrunA17_Chr5g0410941 25.988 481 301 16 5 447 25 488 7.18e-31 124
Msa1049950 MtrunA17_Chr4g0044481 27.229 415 227 14 5 388 27 397 8.77e-31 123
Msa1049950 MtrunA17_Chr4g0029131 26.611 481 266 17 5 442 12 448 1.45e-30 124
Msa1049950 MtrunA17_Chr6g0462531 30.677 251 160 7 202 438 204 454 1.76e-30 122
Msa1049950 MtrunA17_Chr6g0454371 36.686 169 94 5 283 442 3 167 1.85e-30 115
Msa1049950 MtrunA17_Chr1g0196851 26.207 435 274 12 5 415 49 460 2.08e-30 123
Msa1049950 MtrunA17_Chr5g0448521 22.294 462 306 13 9 434 9 453 5.58e-30 121
Msa1049950 MtrunA17_Chr7g0241781 23.894 452 300 12 5 446 9 426 7.17e-30 120
Msa1049950 MtrunA17_Chr5g0442511 22.222 486 302 15 1 446 45 494 7.50e-30 121
Msa1049950 MtrunA17_Chr6g0463851 25.597 461 285 14 5 423 13 457 9.38e-30 121
Msa1049950 MtrunA17_Chr7g0243711 34.135 208 118 4 254 442 103 310 2.46e-29 117
Msa1049950 MtrunA17_Chr2g0294921 26.392 485 298 18 5 447 162 629 2.68e-29 120
Msa1049950 MtrunA17_Chr8g0382021 25.870 460 282 14 10 434 39 474 3.48e-29 119
Msa1049950 MtrunA17_Chr3g0106251 31.955 266 159 9 183 432 20 279 6.98e-29 115
Msa1049950 MtrunA17_Chr2g0283041 26.327 452 292 13 5 438 7 435 1.13e-28 117
Msa1049950 MtrunA17_Chr8g0370941 24.903 514 279 19 5 446 8 486 1.16e-28 118
Msa1049950 MtrunA17_Chr6g0463861 26.362 459 275 14 5 423 13 448 1.39e-28 117
Msa1049950 MtrunA17_Chr2g0319761 27.489 462 279 18 5 442 8 437 1.62e-28 117
Msa1049950 MtrunA17_Chr2g0294931 24.790 476 301 14 9 442 15 475 1.80e-28 117
Msa1049950 MtrunA17_Chr7g0243911 35.979 189 105 4 259 431 22 210 2.57e-28 111
Msa1049950 MtrunA17_Chr5g0429681 24.945 453 288 14 6 425 45 478 2.65e-28 117
Msa1049950 MtrunA17_Chr7g0232351 28.101 395 228 16 5 365 6 378 3.22e-28 115
Msa1049950 MtrunA17_Chr4g0029151 25.386 453 272 14 5 422 20 441 4.59e-28 115
Msa1049950 MtrunA17_Chr8g0374901 25.367 477 293 16 9 442 16 472 5.26e-28 115
Msa1049950 MtrunA17_Chr5g0416821 25.478 471 267 17 3 423 12 448 7.28e-28 115
Msa1049950 MtrunA17_Chr8g0374941 25.870 460 270 14 9 420 15 451 1.06e-27 117
Msa1049950 MtrunA17_Chr8g0374941 24.684 474 304 15 9 443 953 1412 3.26e-26 112
Msa1049950 MtrunA17_Chr8g0374941 25.586 469 282 16 9 431 480 927 5.42e-25 108
Msa1049950 MtrunA17_Chr7g0243611 29.930 284 163 11 124 388 5 271 1.07e-27 112
Msa1049950 MtrunA17_Chr4g0066131 24.895 474 307 14 9 447 17 476 2.19e-27 114
Msa1049950 MtrunA17_Chr7g0218311 25.625 480 305 14 5 447 18 482 2.25e-27 114
Msa1049950 MtrunA17_Chr7g0243851 34.135 208 118 4 259 447 234 441 4.51e-27 112
Msa1049950 MtrunA17_Chr6g0482061 22.944 462 317 12 5 434 11 465 1.42e-26 111
Msa1049950 MtrunA17_Chr6g0466831 24.891 458 306 13 5 442 18 457 1.78e-26 111
Msa1049950 MtrunA17_Chr2g0302961 25.708 459 267 21 12 425 12 441 2.65e-26 110
Msa1049950 MtrunA17_Chr6g0466841 24.454 458 308 13 5 442 18 457 1.64e-25 108
Msa1049950 MtrunA17_Chr8g0367221 23.093 472 308 14 5 443 12 461 1.67e-25 110
Msa1049950 MtrunA17_Chr8g0367221 24.681 470 290 18 5 436 798 1241 2.39e-23 103
Msa1049950 MtrunA17_Chr8g0367221 23.779 471 313 16 5 446 1288 1741 5.61e-23 102
Msa1049950 MtrunA17_Chr2g0294941 36.782 174 90 4 258 411 165 338 2.90e-25 106
Msa1049950 MtrunA17_Chr8g0374971 25.413 484 288 16 9 443 16 475 4.32e-25 107
Msa1049950 MtrunA17_Chr2g0302991 24.283 453 284 17 9 425 9 438 6.76e-25 106
Msa1049950 MtrunA17_Chr5g0431431 28.878 419 197 17 5 407 10 343 9.95e-25 104
Msa1049950 MtrunA17_Chr8g0337381 41.026 117 69 0 327 443 3 119 1.17e-24 99.0
Msa1049950 MtrunA17_Chr2g0278721 25.390 449 273 12 5 415 517 941 1.83e-24 107
Msa1049950 MtrunA17_Chr2g0278721 23.843 432 292 10 5 415 15 430 5.78e-23 102
Msa1049950 MtrunA17_Chr2g0319791 26.419 458 286 15 5 433 8 443 2.53e-24 105
Msa1049950 MtrunA17_Chr3g0079711 34.940 166 86 5 284 427 2 167 2.60e-24 99.8
Msa1049950 MtrunA17_Chr2g0278741 25.740 439 275 15 5 415 97 512 7.53e-24 104
Msa1049950 MtrunA17_Chr6g0454231 33.047 233 98 11 218 435 11 200 8.50e-24 103
Msa1049950 MtrunA17_Chr6g0454231 26.061 165 109 3 4 161 249 407 1.20e-14 75.9
Msa1049950 MtrunA17_Chr2g0302851 22.737 453 324 9 5 443 16 456 7.29e-23 100
Msa1049950 MtrunA17_Chr8g0361411 26.240 484 279 17 5 443 8 458 8.01e-23 100
Msa1049950 MtrunA17_Chr5g0427571 30.268 261 145 8 216 447 46 298 8.62e-23 98.2
Msa1049950 MtrunA17_Chr2g0319731 25.850 441 283 15 5 422 25 444 1.80e-22 99.8
Msa1049950 MtrunA17_Chr2g0319751 26.218 431 278 14 5 414 485 896 1.82e-22 100
Msa1049950 MtrunA17_Chr2g0319751 23.721 430 266 16 5 414 8 395 5.68e-17 84.0
Msa1049950 MtrunA17_Chr4g0042931 24.945 453 285 19 5 423 7 438 5.66e-22 98.2
Msa1049950 MtrunA17_Chr5g0420801 23.404 470 309 15 5 443 7 456 1.15e-21 97.1
Msa1049950 MtrunA17_Chr4g0069611 22.676 441 281 13 5 415 15 425 3.58e-21 95.9
Msa1049950 MtrunA17_Chr2g0319801 25.172 437 291 15 5 422 8 427 4.97e-21 95.1
Msa1049950 MtrunA17_Chr8g0350881 24.641 487 292 17 6 442 13 474 1.20e-20 94.4
Msa1049950 MtrunA17_Chr6g0464091 24.130 460 314 14 5 442 18 464 1.71e-20 93.6
Msa1049950 MtrunA17_Chr3g0092031 34.375 160 97 5 261 415 6 162 4.38e-20 88.2
Msa1049950 MtrunA17_Chr4g0042891 29.864 221 132 6 232 439 239 449 7.14e-20 91.7
Msa1049950 MtrunA17_Chr8g0369341 31.429 175 111 3 259 424 269 443 8.09e-20 91.7
Msa1049950 MtrunA17_Chr8g0357361 35.821 134 82 2 258 388 117 249 1.19e-18 85.5
Msa1049950 MtrunA17_Chr4g0039881 24.941 425 273 13 14 415 1 402 1.79e-18 87.4
Msa1049950 MtrunA17_Chr4g0029161 24.262 474 258 17 5 442 12 420 3.89e-18 86.3
Msa1049950 MtrunA17_Chr6g0453981 27.556 225 131 6 122 320 1 219 2.91e-17 80.9
Msa1049950 MtrunA17_Chr7g0231631 29.670 182 97 5 259 423 67 234 1.32e-15 77.0
Msa1049950 MtrunA17_Chr5g0426411 26.087 161 113 3 4 161 11 168 3.36e-15 73.6
Msa1049950 MtrunA17_Chr4g0066141 34.328 134 70 4 327 443 217 349 1.80e-14 74.7
Msa1049950 MtrunA17_Chr2g0321331 32.515 163 87 5 266 422 91 236 4.91e-14 72.0
Msa1049950 MtrunA17_Chr8g0336271 24.731 186 123 4 1 178 1 177 2.18e-13 70.5
Msa1049950 MtrunA17_Chr7g0243731 40.580 69 41 0 327 395 10 78 1.11e-12 63.5
Msa1049950 MtrunA17_Chr6g0454281 23.494 166 117 3 4 162 9 171 1.87e-12 66.6
Msa1049950 MtrunA17_Chr6g0454391 46.377 69 33 2 340 408 11 75 5.77e-12 62.8
Msa1049950 MtrunA17_Chr6g0453941 35.345 116 62 3 218 320 157 272 6.27e-12 65.9
Msa1049950 MtrunA17_Chr7g0243921 27.273 176 117 4 5 174 40 210 5.46e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1049950 AT3G02100.1 38.612 461 259 8 1 446 9 460 1.83e-115 347
Msa1049950 AT1G05675.1 30.886 463 278 12 5 443 6 450 1.10e-63 213
Msa1049950 AT1G22360.1 30.159 441 272 10 5 417 10 442 4.07e-63 212
Msa1049950 AT1G78270.1 30.377 451 274 13 4 424 12 452 5.32e-63 211
Msa1049950 AT1G22400.1 28.726 463 280 12 4 429 12 461 5.97e-63 211
Msa1049950 AT1G22380.1 29.955 444 273 10 4 418 12 446 1.06e-62 211
Msa1049950 AT1G22370.2 30.825 412 260 8 4 393 12 420 2.21e-62 210
Msa1049950 AT1G22340.1 29.571 443 277 12 4 418 12 447 1.32e-60 205
Msa1049950 AT1G05680.1 31.034 464 276 14 5 443 6 450 1.71e-60 204
Msa1049950 AT1G22360.2 30.456 417 258 9 5 393 10 422 2.48e-60 204
Msa1049950 AT3G21560.1 29.979 477 278 17 4 442 11 469 4.30e-60 204
Msa1049950 AT2G31750.1 29.806 463 277 12 7 442 10 451 2.49e-57 196
Msa1049950 AT3G22250.1 26.809 470 286 13 4 439 7 452 2.78e-57 196
Msa1049950 AT2G31750.2 29.806 463 277 12 7 442 10 451 4.62e-57 196
Msa1049950 AT2G43840.2 28.541 466 278 15 5 443 7 444 1.96e-56 193
Msa1049950 AT2G43840.1 28.755 466 277 15 5 443 7 444 2.44e-56 193
Msa1049950 AT4G15480.1 28.450 471 295 16 3 442 16 475 1.48e-54 189
Msa1049950 AT4G15550.1 29.730 481 281 18 4 447 12 472 5.86e-54 187
Msa1049950 AT3G46670.1 27.609 460 288 12 9 446 13 449 3.74e-53 184
Msa1049950 AT2G43820.1 29.158 463 279 16 5 443 7 444 4.24e-53 184
Msa1049950 AT2G36970.1 28.311 438 282 10 4 418 9 437 2.92e-52 183
Msa1049950 AT2G23260.1 29.399 466 278 17 5 443 10 451 1.80e-51 180
Msa1049950 AT2G23250.1 28.188 447 282 14 15 443 8 433 2.54e-51 179
Msa1049950 AT2G31790.1 27.719 469 285 14 5 442 8 453 5.35e-51 179
Msa1049950 AT5G05880.1 29.851 469 267 15 7 444 10 447 1.32e-50 178
Msa1049950 AT4G14090.1 27.489 462 295 13 3 443 11 453 1.66e-50 177
Msa1049950 AT1G05560.1 28.632 475 279 18 1 442 1 448 1.70e-50 178
Msa1049950 AT5G05860.1 29.590 463 265 15 5 439 9 438 2.41e-50 177
Msa1049950 AT1G05560.2 28.632 475 279 18 1 442 51 498 5.38e-50 177
Msa1049950 AT4G15490.1 26.471 476 294 19 5 443 8 464 7.47e-50 176
Msa1049950 AT3G46720.1 29.306 447 284 13 5 441 9 433 1.18e-49 175
Msa1049950 AT5G59590.1 26.915 457 297 13 5 443 10 447 1.28e-49 175
Msa1049950 AT3G55700.1 29.587 436 272 13 5 423 8 425 1.87e-49 175
Msa1049950 AT3G11340.1 27.706 462 287 13 4 444 8 443 4.57e-49 174
Msa1049950 AT4G15500.1 26.427 473 295 16 4 443 8 460 4.81e-49 174
Msa1049950 AT3G46660.1 27.015 459 294 13 9 446 18 456 9.58e-49 173
Msa1049950 AT3G46700.1 25.166 453 299 12 5 441 9 437 1.15e-48 172
Msa1049950 AT2G28080.1 27.897 466 287 16 9 443 22 469 1.17e-48 173
Msa1049950 AT3G46690.1 28.633 461 288 15 5 443 9 450 7.83e-48 170
Msa1049950 AT3G55710.1 28.842 423 270 11 5 411 8 415 8.15e-48 171
Msa1049950 AT3G46650.1 28.837 430 263 11 5 423 10 407 1.30e-47 169
Msa1049950 AT5G59580.1 26.247 461 300 15 5 446 9 448 2.46e-47 169
Msa1049950 AT2G36750.1 29.938 481 265 17 5 434 10 469 6.10e-46 166
Msa1049950 AT2G30150.2 28.118 473 277 16 1 442 9 449 6.54e-46 165
Msa1049950 AT5G05900.1 29.684 475 259 17 7 444 10 446 1.05e-45 164
Msa1049950 AT3G53160.1 28.662 471 266 16 5 426 8 457 2.11e-45 165
Msa1049950 AT3G46680.1 26.432 454 297 14 5 441 9 442 4.11e-45 163
Msa1049950 AT4G01070.1 28.947 456 255 15 3 417 6 433 1.08e-44 162
Msa1049950 AT5G38010.1 27.376 442 288 11 5 431 10 433 1.66e-44 161
Msa1049950 AT1G01420.1 28.894 443 267 15 3 415 6 430 2.07e-44 162
Msa1049950 AT1G01420.2 28.894 443 267 15 3 415 9 433 2.90e-44 161
Msa1049950 AT2G30150.1 27.957 465 272 16 9 442 1 433 7.37e-44 159
Msa1049950 AT5G38040.1 28.125 448 281 14 15 442 20 446 8.04e-44 159
Msa1049950 AT2G30140.1 27.489 462 287 14 5 443 13 449 9.22e-43 157
Msa1049950 AT3G53150.1 28.144 501 273 18 5 439 22 501 1.09e-42 158
Msa1049950 AT1G01390.1 28.000 450 267 10 3 417 6 433 1.13e-42 157
Msa1049950 AT1G01390.2 28.000 450 267 10 3 417 23 450 1.70e-42 157
Msa1049950 AT2G30140.2 27.409 467 280 15 5 443 13 448 2.31e-42 155
Msa1049950 AT2G36760.1 28.510 463 277 16 5 426 14 463 4.26e-42 155
Msa1049950 AT1G24100.1 26.940 464 294 12 5 442 11 455 1.14e-41 154
Msa1049950 AT1G05530.1 26.434 488 276 17 1 442 1 451 1.16e-41 154
Msa1049950 AT2G36770.1 27.527 465 273 16 5 423 14 460 1.51e-41 154
Msa1049950 AT5G05890.1 28.256 453 272 14 5 430 8 434 5.57e-41 152
Msa1049950 AT5G05870.1 26.124 467 295 14 5 443 8 452 2.60e-40 150
Msa1049950 AT2G36800.1 28.361 476 254 17 5 422 12 458 4.13e-40 150
Msa1049950 AT2G26480.1 25.455 440 293 12 7 434 10 426 7.85e-40 149
Msa1049950 AT1G22370.1 36.620 213 115 5 198 393 41 250 4.16e-39 143
Msa1049950 AT2G36780.1 28.178 472 261 18 5 423 14 460 1.15e-38 146
Msa1049950 AT2G15480.1 27.423 485 288 16 5 442 10 477 3.97e-38 145
Msa1049950 AT2G15490.3 27.835 485 286 17 5 442 7 474 9.35e-38 144
Msa1049950 AT5G17050.1 24.944 449 269 13 3 418 10 423 1.67e-37 142
Msa1049950 AT2G15490.1 27.664 488 286 17 5 442 7 477 2.52e-37 142
Msa1049950 AT2G36790.1 29.114 474 252 18 5 422 13 458 5.55e-37 142
Msa1049950 AT2G15480.2 26.465 495 290 16 5 442 10 487 2.26e-35 137
Msa1049950 AT4G34131.1 26.240 484 301 13 5 447 10 478 2.38e-35 137
Msa1049950 AT3G21790.1 23.736 455 290 12 9 419 8 449 1.02e-34 135
Msa1049950 AT2G16890.2 26.957 460 279 14 5 429 9 446 3.69e-34 134
Msa1049950 AT1G10400.1 27.950 483 275 18 5 443 7 460 6.03e-34 133
Msa1049950 AT5G65550.1 26.059 472 295 15 5 444 9 458 2.37e-33 131
Msa1049950 AT4G36770.1 28.478 460 250 21 5 418 4 430 2.52e-33 131
Msa1049950 AT3G21800.1 22.661 481 310 12 9 443 9 473 7.71e-33 130
Msa1049950 AT3G21750.1 22.319 457 292 15 9 423 8 443 8.13e-33 130
Msa1049950 AT3G21760.1 25.221 452 289 13 9 419 8 451 1.04e-32 129
Msa1049950 AT3G16520.2 34.123 211 116 6 236 433 239 439 2.26e-32 128
Msa1049950 AT2G16890.3 26.712 438 266 12 5 409 9 424 2.30e-32 127
Msa1049950 AT3G16520.1 34.123 211 116 6 236 433 239 439 2.46e-32 128
Msa1049950 AT3G16520.3 34.123 211 116 6 236 433 239 439 2.76e-32 128
Msa1049950 AT3G21780.1 25.822 426 252 12 28 419 44 439 3.07e-32 128
Msa1049950 AT4G34135.1 25.280 447 278 12 5 411 11 441 3.15e-32 128
Msa1049950 AT4G15280.1 22.907 454 301 11 9 425 8 449 6.38e-32 127
Msa1049950 AT4G15280.2 22.907 454 301 11 9 425 40 481 1.06e-31 127
Msa1049950 AT2G29740.1 26.667 465 275 19 9 429 12 454 1.23e-31 126
Msa1049950 AT4G34138.1 25.420 476 301 12 1 434 1 464 1.73e-31 126
Msa1049950 AT5G14860.1 26.000 450 273 13 5 414 8 437 3.57e-31 125
Msa1049950 AT5G53990.1 23.636 440 299 12 3 433 4 415 3.82e-30 122
Msa1049950 AT3G50740.1 33.962 212 108 4 236 423 241 444 7.84e-30 121
Msa1049950 AT5G26310.1 24.123 456 286 14 4 423 6 437 1.06e-29 121
Msa1049950 AT5G66690.1 24.686 478 284 17 4 439 6 449 1.14e-29 121
Msa1049950 AT5G12890.1 24.746 493 302 16 3 445 8 481 1.87e-29 120
Msa1049950 AT5G54010.1 24.048 420 292 11 5 414 6 408 2.71e-29 119
Msa1049950 AT5G17030.1 29.947 187 126 3 233 418 240 422 2.92e-29 119
Msa1049950 AT5G49690.1 25.902 471 292 18 5 446 10 452 9.82e-29 118
Msa1049950 AT4G27570.1 24.775 444 290 13 5 433 7 421 1.07e-28 117
Msa1049950 AT1G07250.1 30.769 208 134 4 232 429 245 452 1.26e-28 118
Msa1049950 AT2G29750.1 32.883 222 127 8 232 438 249 463 1.60e-28 117
Msa1049950 AT2G22930.1 24.824 427 280 15 3 414 2 402 2.00e-28 117
Msa1049950 AT5G17040.2 29.474 190 123 4 233 418 122 304 4.53e-28 114
Msa1049950 AT4G15260.1 28.390 236 131 7 216 419 96 325 4.80e-28 114
Msa1049950 AT5G17040.1 29.474 190 123 4 233 418 224 406 6.99e-28 115
Msa1049950 AT1G64910.1 23.877 423 279 12 5 412 6 400 9.12e-28 115
Msa1049950 AT1G50580.1 24.000 425 286 12 5 416 6 406 9.49e-28 115
Msa1049950 AT3G29630.1 24.171 422 282 15 5 412 6 403 1.97e-27 114
Msa1049950 AT2G18570.1 23.000 500 297 19 1 447 1 465 2.31e-27 114
Msa1049950 AT2G29730.1 24.204 471 316 17 1 442 1 459 2.32e-27 114
Msa1049950 AT4G27560.1 24.533 428 284 13 5 416 7 411 5.08e-27 113
Msa1049950 AT3G29630.2 24.700 417 260 15 5 412 6 377 5.89e-27 112
Msa1049950 AT2G18560.1 29.614 233 136 6 236 447 150 375 2.73e-26 110
Msa1049950 AT1G30530.1 31.429 210 119 5 233 422 237 441 6.36e-26 110
Msa1049950 AT5G37950.1 27.306 271 185 4 107 367 77 345 1.45e-25 107
Msa1049950 AT5G03490.1 25.214 468 294 17 4 440 18 460 3.52e-25 107
Msa1049950 AT2G22590.1 23.625 491 284 19 5 444 15 465 3.59e-25 107
Msa1049950 AT1G07260.1 28.972 214 132 5 232 430 244 452 8.56e-25 107
Msa1049950 AT2G29710.1 27.200 250 156 8 216 443 215 460 1.26e-24 106
Msa1049950 AT1G64920.1 24.065 428 285 14 5 416 6 409 3.36e-24 105
Msa1049950 AT1G51210.1 26.747 415 250 19 4 396 19 401 1.14e-23 103
Msa1049950 AT4G09500.2 22.844 429 284 13 4 414 3 402 2.87e-23 102
Msa1049950 AT5G37950.2 26.667 270 182 4 107 367 77 339 3.73e-23 100
Msa1049950 AT1G07240.1 26.180 233 153 5 232 447 244 474 5.96e-23 101
Msa1049950 AT5G54060.1 24.480 433 293 13 10 422 18 436 8.64e-23 100
Msa1049950 AT4G09500.1 22.014 427 265 13 4 414 3 377 2.12e-21 96.3
Msa1049950 AT1G73880.1 29.032 217 142 6 237 442 248 463 9.09e-21 95.1
Msa1049950 AT4G01070.2 27.711 332 187 13 3 309 6 309 5.50e-19 88.6
Msa1049950 AT1G06000.1 23.404 470 281 18 4 442 9 430 1.47e-18 88.2
Msa1049950 AT4G34135.2 24.852 338 207 10 5 311 11 332 2.91e-14 73.9
Msa1049950 AT2G23210.1 26.644 289 169 12 5 274 10 274 3.88e-14 73.2

Find 105 sgRNAs with CRISPR-Local

Find 265 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGAAGACAACTTCAATTAT+TGG 0.223609 7_2:-13599051 Msa1049950:CDS
GCTCATCAGTTGGGAATTAA+AGG 0.234959 7_2:-13598802 Msa1049950:CDS
GAAACATATAAGACAGATTT+AGG 0.245067 7_2:+13595974 None:intergenic
TTCTACCAGCTTCCCTATAA+TGG 0.245607 7_2:-13599205 Msa1049950:exon
GCAATACCATTCCCAATTCT+TGG 0.250109 7_2:-13599165 Msa1049950:CDS
GAGATGCAAAGTATGAATTT+AGG 0.284928 7_2:-13596160 Msa1049950:CDS
AAATGTGGGTTTCCCATTAT+AGG 0.286991 7_2:+13599192 None:intergenic
TTTATCTCTTCTATGAGTTT+AGG 0.305049 7_2:+13598895 None:intergenic
TTACGTACAACCCAAATAAA+AGG 0.307119 7_2:+13595878 None:intergenic
CTATAGAAAGTGTGTATAAT+GGG 0.310119 7_2:-13595712 Msa1049950:CDS
TTGTTATTTACATAGATTAT+CGG 0.317483 7_2:-13595327 Msa1049950:three_prime_UTR
GCTAATTCTTTGAATTGGTT+TGG 0.327436 7_2:+13595926 None:intergenic
ACTATAGAAAGTGTGTATAA+TGG 0.338663 7_2:-13595713 Msa1049950:CDS
TCTACCAATTGGTCCACTAA+TGG 0.347680 7_2:-13596071 Msa1049950:CDS
GTAGAAGTGGTGTAAATTAT+TGG 0.349060 7_2:+13599222 None:intergenic
CTAGAGCTAATTCTTTGAAT+TGG 0.349399 7_2:+13595921 None:intergenic
TTCTTCAAATTTGCCTATGA+TGG 0.352015 7_2:-13596245 Msa1049950:CDS
ATTGCAGCTGCTTCCATCAT+AGG 0.374719 7_2:+13596232 None:intergenic
TCTTGAGGACTCACACCATC+TGG 0.380472 7_2:+13598979 None:intergenic
ATTTAAACAAGTTTATCAAT+TGG 0.381381 7_2:-13595463 Msa1049950:CDS
AGTTGAATTTCTTGTTTCCT+TGG 0.385314 7_2:+13596268 None:intergenic
GAATGAACATGCGAGTATTT+CGG 0.387317 7_2:+13595354 None:intergenic
TTTAAACAAGTTTATCAATT+GGG 0.389077 7_2:-13595462 Msa1049950:CDS
TGGTAGAAACTTTGGTGATA+AGG 0.390574 7_2:+13596087 None:intergenic
GTGGCTTTGTAACACTAGTA+TGG 0.398180 7_2:-13596131 Msa1049950:CDS
TCACCAAAGTTTCTACCAAT+TGG 0.400946 7_2:-13596082 Msa1049950:CDS
GAGTTTAATATCAAGATCTA+AGG 0.401559 7_2:+13595296 None:intergenic
AACATGAGAAAATTGCATAA+GGG 0.403711 7_2:+13599131 None:intergenic
GGATTCATATGTCCAAGAAT+TGG 0.404340 7_2:+13599153 None:intergenic
AATGTGGGTTTCCCATTATA+GGG 0.404749 7_2:+13599193 None:intergenic
CTCATCAGTTGGGAATTAAA+GGG 0.405394 7_2:-13598801 Msa1049950:CDS
TCTGTCTTATATGTTTCATT+TGG 0.405459 7_2:-13595968 Msa1049950:CDS
GCCAGCCTCAGCAACTTCAT+TGG 0.406064 7_2:-13598767 Msa1049950:CDS
TGATGTGTGGAAGGTTGGAT+TGG 0.407953 7_2:-13595630 Msa1049950:CDS
CCCAAATAAAAGGTATCTTA+AGG 0.417861 7_2:+13595888 None:intergenic
TCTACCAGCTTCCCTATAAT+GGG 0.419163 7_2:-13599204 Msa1049950:exon
TTGGGTTGTACGTAAAGATA+AGG 0.439435 7_2:-13595870 Msa1049950:CDS
GATTCATATGTCCAAGAATT+GGG 0.440362 7_2:+13599154 None:intergenic
GGAAATCAAGGTAAAATTGT+TGG 0.442876 7_2:-13595809 Msa1049950:CDS
ACCAATGAAGTTGCTGAGGC+TGG 0.449225 7_2:+13598766 None:intergenic
ATTTGTGATGTGTGGAAGGT+TGG 0.452190 7_2:-13595635 Msa1049950:CDS
TGGGTTGTACGTAAAGATAA+GGG 0.454419 7_2:-13595869 Msa1049950:CDS
GATGTGTGGAAGGTTGGATT+GGG 0.458420 7_2:-13595629 Msa1049950:CDS
TCTTGTGGACAAAATAACTT+TGG 0.459475 7_2:+13598939 None:intergenic
TTGGAAGTTGCTCATCAGTT+GGG 0.463102 7_2:-13598811 Msa1049950:CDS
GGACCAATTGGTAGAAACTT+TGG 0.465856 7_2:+13596079 None:intergenic
AAACATGAGAAAATTGCATA+AGG 0.467719 7_2:+13599130 None:intergenic
CAATTCAAAGAATTAGCTCT+AGG 0.470952 7_2:-13595920 Msa1049950:CDS
TGATTTCCGTTGAATTCACT+TGG 0.479240 7_2:+13595824 None:intergenic
CTTGGAAGTTGCTCATCAGT+TGG 0.487035 7_2:-13598812 Msa1049950:CDS
AAAGGAAGAGATAAAGAAGA+AGG 0.488960 7_2:-13595576 Msa1049950:CDS
GCATCTCTTTCATCATATGA+AGG 0.493422 7_2:+13596176 None:intergenic
GTTTCATTACACATTGTGGC+TGG 0.494893 7_2:-13595742 Msa1049950:CDS
AGTGAATTCAACGGAAATCA+AGG 0.502971 7_2:-13595821 Msa1049950:CDS
TTGGAATTTCAGGTCTTCCA+AGG 0.511467 7_2:-13596285 Msa1049950:intron
AAGATGAAACATGCATAGAA+TGG 0.513759 7_2:-13596012 Msa1049950:CDS
GTTTCCCATTATAGGGAAGC+TGG 0.519115 7_2:+13599200 None:intergenic
TCAATTATTGGTCATGAGCA+AGG 0.521225 7_2:-13599039 Msa1049950:CDS
ATCAAGGTAAAATTGTTGGT+TGG 0.525446 7_2:-13595805 Msa1049950:CDS
CATCATATGAAGGAAGAAGA+AGG 0.529513 7_2:+13596186 None:intergenic
ATAACAACATGGGATCTTTG+TGG 0.534699 7_2:-13596039 Msa1049950:CDS
ACATGAGAAAATTGCATAAG+GGG 0.541235 7_2:+13599132 None:intergenic
TGAGCTCATAGTGGTTCTTG+TGG 0.542914 7_2:+13598924 None:intergenic
CAAGTTTATCAATTGGGCAA+AGG 0.545698 7_2:-13595456 Msa1049950:CDS
TAGTCAGACATGGTCCATCA+TGG 0.545838 7_2:-13595398 Msa1049950:three_prime_UTR
ATCTTTGAAATTAATGACAA+TGG 0.553092 7_2:-13595516 Msa1049950:CDS
GCATGTTTCATTACACATTG+TGG 0.553492 7_2:-13595746 Msa1049950:CDS
ATGGTATTGCAAGAAAATGT+GGG 0.557257 7_2:+13599178 None:intergenic
AATTCAAAGAATTAGCTCTA+GGG 0.562650 7_2:-13595919 Msa1049950:CDS
CTTGAGGACTCACACCATCT+GGG 0.568847 7_2:+13598980 None:intergenic
AAAGTATGAATTTAGGAGAG+TGG 0.571212 7_2:-13596153 Msa1049950:CDS
TATAGGGAAGCTGGTAGAAG+TGG 0.575502 7_2:+13599209 None:intergenic
GTAATGAAACATGCTATTGA+AGG 0.575536 7_2:+13595755 None:intergenic
TAACACTAGTATGGATCTTG+AGG 0.575545 7_2:-13596122 Msa1049950:CDS
GATTTCCGTTGAATTCACTT+GGG 0.579895 7_2:+13595825 None:intergenic
GAGTATTTCGGTGGACAAGT+AGG 0.584117 7_2:+13595366 None:intergenic
TGAAAATGGATTAATAACAA+AGG 0.585785 7_2:-13595594 Msa1049950:CDS
CAACTGATGAGCAACTTCCA+AGG 0.586354 7_2:+13598813 None:intergenic
GGAAGAGATAAAGAAGAAGG+TGG 0.592728 7_2:-13595573 Msa1049950:CDS
AATGGTATTGCAAGAAAATG+TGG 0.593304 7_2:+13599177 None:intergenic
TTTGAAATTAATGACAATGG+TGG 0.597188 7_2:-13595513 Msa1049950:CDS
AGGAAGCATTGAGCTCATAG+TGG 0.603824 7_2:+13598915 None:intergenic
GTAGGACAAATGATCCATGA+TGG 0.605998 7_2:+13595384 None:intergenic
TCAAGATGATAGAAAAGATG+TGG 0.608705 7_2:-13598962 Msa1049950:CDS
AATCGCTACTTAGTCAGACA+TGG 0.610696 7_2:-13595408 Msa1049950:three_prime_UTR
ATATATTTGTGATGTGTGGA+AGG 0.612915 7_2:-13595639 Msa1049950:CDS
AGAAACCAATGAAGTTGCTG+AGG 0.614828 7_2:+13598762 None:intergenic
GAAAATGAGCATAACAACAT+GGG 0.616863 7_2:-13596049 Msa1049950:CDS
TCATCAGTTGGGAATTAAAG+GGG 0.620363 7_2:-13598800 Msa1049950:CDS
GGAAAATGAGCATAACAACA+TGG 0.627388 7_2:-13596050 Msa1049950:CDS
AGACATATATTTGTGATGTG+TGG 0.627498 7_2:-13595643 Msa1049950:CDS
ATATGTCCAAGAATTGGGAA+TGG 0.627578 7_2:+13599159 None:intergenic
AATTTAGTATCTCTCCCAGA+TGG 0.632937 7_2:-13598994 Msa1049950:CDS
GTATGAATTTAGGAGAGTGG+TGG 0.634855 7_2:-13596150 Msa1049950:CDS
GTGGCGAAGAACAAAGCAGA+AGG 0.644524 7_2:-13595494 Msa1049950:CDS
GCATTACTTAAGTTATACCA+TGG 0.646081 7_2:+13596208 None:intergenic
GCATACCCAAGTGAATTCAA+CGG 0.647895 7_2:-13595830 Msa1049950:CDS
TATAGAAAGTGTGTATAATG+GGG 0.651966 7_2:-13595711 Msa1049950:CDS
TCATGAGCAAGGAAAAGTCA+AGG 0.658497 7_2:-13599028 Msa1049950:CDS
TAATGAAACATGCTATTGAA+GGG 0.664013 7_2:+13595756 None:intergenic
TGAACATGCGAGTATTTCGG+TGG 0.668017 7_2:+13595357 None:intergenic
ACATATAAGACAGATTTAGG+TGG 0.669277 7_2:+13595977 None:intergenic
TGGAAGCAGCTGCAATGCCA+TGG 0.672614 7_2:-13596225 Msa1049950:CDS
GGAATTATAGATCCTCGAAG+TGG 0.679223 7_2:-13598709 Msa1049950:intron
TATCAAGATCTAAGGCTCAG+TGG 0.694720 7_2:+13595304 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATATAATAATACTAACA+TGG - chr7_2:13596677-13596696 Msa1049950:intron 10.0%
!!! TTTTTTCAAAATCAAATTTT+TGG - chr7_2:13597096-13597115 Msa1049950:intron 10.0%
!!! TTTTTAGATTAAAAAAACAT+GGG + chr7_2:13597158-13597177 None:intergenic 10.0%
!! ATAGTAAAATAAGTATAAAA+CGG - chr7_2:13597378-13597397 Msa1049950:intron 10.0%
!! TATAATTGTCACAAAAAATA+TGG - chr7_2:13595689-13595708 Msa1049950:CDS 15.0%
!! ATAATTGTCACAAAAAATAT+GGG - chr7_2:13595690-13595709 Msa1049950:CDS 15.0%
!! TTAAACATGTACTAATATTT+AGG + chr7_2:13596457-13596476 None:intergenic 15.0%
!!! TTATACTTAATAAAGCATTA+GGG - chr7_2:13596551-13596570 Msa1049950:intron 15.0%
!!! TTTTTTTTATCATAACACTA+AGG + chr7_2:13596836-13596855 None:intergenic 15.0%
!! AGTAATATATAACAAATTTG+TGG - chr7_2:13596874-13596893 Msa1049950:intron 15.0%
!! GTAATATATAACAAATTTGT+GGG - chr7_2:13596875-13596894 Msa1049950:intron 15.0%
!! TTCTAAGTTTAAAAATTAGA+AGG + chr7_2:13596938-13596957 None:intergenic 15.0%
!! CAACTTCAATAAAAAAAAAT+AGG - chr7_2:13597023-13597042 Msa1049950:intron 15.0%
!!! GTTTTTAGATTAAAAAAACA+TGG + chr7_2:13597159-13597178 None:intergenic 15.0%
!!! AAGTTTGATTTTAAAAAAAG+AGG - chr7_2:13597302-13597321 Msa1049950:intron 15.0%
!!! AGTTTGATTTTAAAAAAAGA+GGG - chr7_2:13597303-13597322 Msa1049950:intron 15.0%
!!! ACAGTTTATTAATTGAATTT+TGG - chr7_2:13598227-13598246 Msa1049950:intron 15.0%
!! ATTTAAACAAGTTTATCAAT+TGG - chr7_2:13599068-13599087 Msa1049950:CDS 15.0%
!! TTTAAACAAGTTTATCAATT+GGG - chr7_2:13599069-13599088 Msa1049950:CDS 15.0%
!!! TTGTTATTTACATAGATTAT+CGG - chr7_2:13599204-13599223 Msa1049950:exon 15.0%
!! TTAATACTGAAAGTAAACTA+TGG + chr7_2:13596051-13596070 None:intergenic 20.0%
!! TATTCACAAATATCTCTATA+TGG + chr7_2:13596142-13596161 None:intergenic 20.0%
!! AACATAATAAAGTGATATCA+TGG - chr7_2:13596206-13596225 Msa1049950:CDS 20.0%
!!! TAGGACTAATTTTTTTTTGT+TGG + chr7_2:13596438-13596457 None:intergenic 20.0%
!!! CTTATACTTAATAAAGCATT+AGG - chr7_2:13596550-13596569 Msa1049950:intron 20.0%
!!! AGTATTTTTCTTTTATTGAG+AGG - chr7_2:13596574-13596593 Msa1049950:intron 20.0%
!! TCAAAAGAATCTTATATTCA+AGG - chr7_2:13596782-13596801 Msa1049950:intron 20.0%
!! CTTTGCATAAAATAAGTTTA+GGG - chr7_2:13597000-13597019 Msa1049950:intron 20.0%
!!! AAATAGGATTAACTGTATTT+TGG - chr7_2:13597039-13597058 Msa1049950:intron 20.0%
!!! TCTTACATTTGTTACAATTA+TGG - chr7_2:13597126-13597145 Msa1049950:intron 20.0%
!!! TAATTGAATTTTGGAATTTC+AGG - chr7_2:13598236-13598255 Msa1049950:intron 20.0%
!!! ATAAGTTGATCACTAAAAAA+TGG + chr7_2:13598863-13598882 None:intergenic 20.0%
!!! TGAAAATGGATTAATAACAA+AGG - chr7_2:13598937-13598956 Msa1049950:CDS 20.0%
!!! ATCTTTGAAATTAATGACAA+TGG - chr7_2:13599015-13599034 Msa1049950:CDS 20.0%
! AACATGAGAAAATTGCATAA+GGG + chr7_2:13595403-13595422 None:intergenic 25.0%
! AAACATGAGAAAATTGCATA+AGG + chr7_2:13595404-13595423 None:intergenic 25.0%
!! TATGCAATTTTCTCATGTTT+TGG - chr7_2:13595404-13595423 Msa1049950:three_prime_UTR 25.0%
! ATGAAGACAACTTCAATTAT+TGG - chr7_2:13595480-13595499 Msa1049950:CDS 25.0%
! TTTATCTCTTCTATGAGTTT+AGG + chr7_2:13595639-13595658 None:intergenic 25.0%
!!! ATTGGTTTCTTTTAACTCTA+TGG - chr7_2:13595782-13595801 Msa1049950:CDS 25.0%
!!! TGTACTTTTTTTGTTAAAGG+TGG + chr7_2:13595881-13595900 None:intergenic 25.0%
!!! GCTTGTACTTTTTTTGTTAA+AGG + chr7_2:13595884-13595903 None:intergenic 25.0%
! TAATGGTTATGAATCAAATG+GGG + chr7_2:13595922-13595941 None:intergenic 25.0%
! CTAATGGTTATGAATCAAAT+GGG + chr7_2:13595923-13595942 None:intergenic 25.0%
! ACTAATGGTTATGAATCAAA+TGG + chr7_2:13595924-13595943 None:intergenic 25.0%
! ATCCTATTATATGTTTCCTA+TGG - chr7_2:13595961-13595980 Msa1049950:CDS 25.0%
! CAATAAATGAATTAGACCAT+AGG + chr7_2:13595980-13595999 None:intergenic 25.0%
! CTATGGTCTAATTCATTTAT+TGG - chr7_2:13595978-13595997 Msa1049950:CDS 25.0%
! ATGACAAGATAATTAATGCT+TGG + chr7_2:13596022-13596041 None:intergenic 25.0%
!!! GATTTAATTTGTATGCACTA+TGG - chr7_2:13596077-13596096 Msa1049950:CDS 25.0%
!! ATATCATGGTATGATTTTGT+TGG - chr7_2:13596220-13596239 Msa1049950:CDS 25.0%
!!! TAATTTTTTTTTGTTGGCTC+GGG + chr7_2:13596432-13596451 None:intergenic 25.0%
!!! CTAATTTTTTTTTGTTGGCT+CGG + chr7_2:13596433-13596452 None:intergenic 25.0%
! TAACATGGTAAACATATTAG+TGG - chr7_2:13596692-13596711 Msa1049950:intron 25.0%
! AAGAATCTTATATTCAAGGA+AGG - chr7_2:13596786-13596805 Msa1049950:intron 25.0%
! TAATAATCACTATAGCTCAA+TGG - chr7_2:13596907-13596926 Msa1049950:intron 25.0%
! GCTTTGCATAAAATAAGTTT+AGG - chr7_2:13596999-13597018 Msa1049950:intron 25.0%
! TTGTAACAAATGTAAGATAG+AGG + chr7_2:13597123-13597142 None:intergenic 25.0%
!!! AGACCAAAATACATCTTTTT+TGG - chr7_2:13597194-13597213 Msa1049950:intron 25.0%
!! GTACCAAAAAAGATGTATTT+TGG + chr7_2:13597200-13597219 None:intergenic 25.0%
!!! AGAAATTAAATAGCCACTTT+TGG + chr7_2:13597222-13597241 None:intergenic 25.0%
!! AAAGTGGCTATTTAATTTCT+AGG - chr7_2:13597222-13597241 Msa1049950:intron 25.0%
!! AAGTGGCTATTTAATTTCTA+GGG - chr7_2:13597223-13597242 Msa1049950:intron 25.0%
!! AATTTCTAGGGGAAAAAATA+TGG - chr7_2:13597235-13597254 Msa1049950:intron 25.0%
! ATAATAAGTACAGTGTGTAT+TGG - chr7_2:13597402-13597421 Msa1049950:intron 25.0%
!!! AAAAAAGTGTCAACAAATGA+AGG - chr7_2:13597439-13597458 Msa1049950:intron 25.0%
! AGAGTAATAACTTAAGTCTT+TGG - chr7_2:13597574-13597593 Msa1049950:intron 25.0%
! AAAAATCGAAAGATAGAAGA+AGG + chr7_2:13597606-13597625 None:intergenic 25.0%
! TAAGAACACCAATTCTAATT+GGG - chr7_2:13597633-13597652 Msa1049950:intron 25.0%
!!! CAATCAAATTCTCCATTTTT+AGG - chr7_2:13597678-13597697 Msa1049950:intron 25.0%
!!! TTGCATAAGTTGATTATGAT+AGG - chr7_2:13597805-13597824 Msa1049950:intron 25.0%
! ATGATAGGATACTTAAACTA+AGG - chr7_2:13597820-13597839 Msa1049950:intron 25.0%
!!! CATTTTGATTAAGGTGAATA+CGG + chr7_2:13597891-13597910 None:intergenic 25.0%
!!! CATTAGATCCATTTTGATTA+AGG + chr7_2:13597900-13597919 None:intergenic 25.0%
! AATCAAAATGGATCTAATGT+AGG - chr7_2:13597901-13597920 Msa1049950:intron 25.0%
! ATCAAAATGGATCTAATGTA+GGG - chr7_2:13597902-13597921 Msa1049950:intron 25.0%
! ATTATGAGGTCATAAAACAT+AGG + chr7_2:13597971-13597990 None:intergenic 25.0%
! TCTTCATTTGATTCATTATG+AGG + chr7_2:13597985-13598004 None:intergenic 25.0%
!! TTATTTCCTTATTTAGTGCT+TGG - chr7_2:13598016-13598035 Msa1049950:intron 25.0%
! AAGCTAAAACTTGTATTGTT+TGG - chr7_2:13598177-13598196 Msa1049950:intron 25.0%
! GAAACATATAAGACAGATTT+AGG + chr7_2:13598560-13598579 None:intergenic 25.0%
! TCTGTCTTATATGTTTCATT+TGG - chr7_2:13598563-13598582 Msa1049950:intron 25.0%
!!! AATTCAAAGAATTAGCTCTA+GGG - chr7_2:13598612-13598631 Msa1049950:intron 25.0%
!! TCCTTAAGATACCTTTTATT+TGG - chr7_2:13598642-13598661 Msa1049950:intron 25.0%
!!! CCTTAAGATACCTTTTATTT+GGG - chr7_2:13598643-13598662 Msa1049950:intron 25.0%
!!! TGACTCAAAATCTTTTTTTG+TGG + chr7_2:13598755-13598774 None:intergenic 25.0%
! TAATGAAACATGCTATTGAA+GGG + chr7_2:13598778-13598797 None:intergenic 25.0%
!! ACTATAGAAAGTGTGTATAA+TGG - chr7_2:13598818-13598837 Msa1049950:CDS 25.0%
!! CTATAGAAAGTGTGTATAAT+GGG - chr7_2:13598819-13598838 Msa1049950:CDS 25.0%
!! TATAGAAAGTGTGTATAATG+GGG - chr7_2:13598820-13598839 Msa1049950:CDS 25.0%
! GGATTTGAAAAAGATGAAAA+TGG - chr7_2:13598923-13598942 Msa1049950:CDS 25.0%
!! TTTGAAATTAATGACAATGG+TGG - chr7_2:13599018-13599037 Msa1049950:CDS 25.0%
! GAGTTTAATATCAAGATCTA+AGG + chr7_2:13599238-13599257 None:intergenic 25.0%
GTAGAAGTGGTGTAAATTAT+TGG + chr7_2:13595312-13595331 None:intergenic 30.0%
ATGGTATTGCAAGAAAATGT+GGG + chr7_2:13595356-13595375 None:intergenic 30.0%
AATGGTATTGCAAGAAAATG+TGG + chr7_2:13595357-13595376 None:intergenic 30.0%
GATTCATATGTCCAAGAATT+GGG + chr7_2:13595380-13595399 None:intergenic 30.0%
ACATGAGAAAATTGCATAAG+GGG + chr7_2:13595402-13595421 None:intergenic 30.0%
! ACATCTTTTCTATCATCTTG+AGG + chr7_2:13595570-13595589 None:intergenic 30.0%
TCAAGATGATAGAAAAGATG+TGG - chr7_2:13595569-13595588 Msa1049950:CDS 30.0%
TCTTGTGGACAAAATAACTT+TGG + chr7_2:13595595-13595614 None:intergenic 30.0%
TTGTCACAAAAAATATGGGT+TGG - chr7_2:13595694-13595713 Msa1049950:CDS 30.0%
TGTCACAAAAAATATGGGTT+GGG - chr7_2:13595695-13595714 Msa1049950:CDS 30.0%
AAAAAATTCTTACCACTTCG+AGG + chr7_2:13595837-13595856 None:intergenic 30.0%
AGTACAAGCAATTCTTAACA+TGG - chr7_2:13595895-13595914 Msa1049950:CDS 30.0%
GATGCAGAATAAACAACTAA+TGG + chr7_2:13595939-13595958 None:intergenic 30.0%
GACCATAGGAAACATATAAT+AGG + chr7_2:13595966-13595985 None:intergenic 30.0%
TAATGCTTGGTTCATTATTG+AGG + chr7_2:13596009-13596028 None:intergenic 30.0%
! TCATCTCATCTAAGCATTTT+TGG + chr7_2:13596304-13596323 None:intergenic 30.0%
GGTCTCTTCTAATTTAACTA+AGG - chr7_2:13596328-13596347 Msa1049950:intron 30.0%
AAACATATTAGTGGTGTTCT+AGG - chr7_2:13596701-13596720 Msa1049950:intron 30.0%
AATCTTATATTCAAGGAAGG+AGG - chr7_2:13596789-13596808 Msa1049950:intron 30.0%
! TTTTCACGAGCATTATAACA+GGG + chr7_2:13597068-13597087 None:intergenic 30.0%
! ATTTTCACGAGCATTATAAC+AGG + chr7_2:13597069-13597088 None:intergenic 30.0%
!!! ATCTTTTTTGGTACCAAAAG+TGG - chr7_2:13597206-13597225 Msa1049950:intron 30.0%
! AGTGGCTATTTAATTTCTAG+GGG - chr7_2:13597224-13597243 Msa1049950:intron 30.0%
ATAACTTAAGTCTTTGGATC+AGG - chr7_2:13597580-13597599 Msa1049950:intron 30.0%
CTAAGAACACCAATTCTAAT+TGG - chr7_2:13597632-13597651 Msa1049950:intron 30.0%
AATGAGAACCCAATTAGAAT+TGG + chr7_2:13597644-13597663 None:intergenic 30.0%
CGTATTCACCTTAATCAAAA+TGG - chr7_2:13597889-13597908 Msa1049950:intron 30.0%
GAGTAATATTGAGTATGCTA+GGG - chr7_2:13597924-13597943 Msa1049950:intron 30.0%
AAAACATAGGTAAATGCACA+CGG + chr7_2:13597958-13597977 None:intergenic 30.0%
ATATCACCAAGCACTAAATA+AGG + chr7_2:13598025-13598044 None:intergenic 30.0%
! AATTTGAGTTCTAGTGTGAT+AGG + chr7_2:13598054-13598073 None:intergenic 30.0%
GTTATCTTATCGCTATTACA+GGG + chr7_2:13598077-13598096 None:intergenic 30.0%
GTATCTCAACTTTGCAAAAT+AGG - chr7_2:13598143-13598162 Msa1049950:intron 30.0%
!!! CAAGTTTTAGCTTCTTGTTT+TGG + chr7_2:13598170-13598189 None:intergenic 30.0%
! AGTTGAATTTCTTGTTTCCT+TGG + chr7_2:13598266-13598285 None:intergenic 30.0%
TTCTTCAAATTTGCCTATGA+TGG - chr7_2:13598286-13598305 Msa1049950:intron 30.0%
GCATTACTTAAGTTATACCA+TGG + chr7_2:13598326-13598345 None:intergenic 30.0%
GAGATGCAAAGTATGAATTT+AGG - chr7_2:13598371-13598390 Msa1049950:intron 30.0%
AAAGTATGAATTTAGGAGAG+TGG - chr7_2:13598378-13598397 Msa1049950:intron 30.0%
! TTATGCTCATTTTCCATTAG+TGG + chr7_2:13598476-13598495 None:intergenic 30.0%
GAAAATGAGCATAACAACAT+GGG - chr7_2:13598482-13598501 Msa1049950:intron 30.0%
AAGATGAAACATGCATAGAA+TGG - chr7_2:13598519-13598538 Msa1049950:intron 30.0%
ACATATAAGACAGATTTAGG+TGG + chr7_2:13598557-13598576 None:intergenic 30.0%
GCTAATTCTTTGAATTGGTT+TGG + chr7_2:13598608-13598627 None:intergenic 30.0%
CTAGAGCTAATTCTTTGAAT+TGG + chr7_2:13598613-13598632 None:intergenic 30.0%
! CAATTCAAAGAATTAGCTCT+AGG - chr7_2:13598611-13598630 Msa1049950:intron 30.0%
!! CCCAAATAAAAGGTATCTTA+AGG + chr7_2:13598646-13598665 None:intergenic 30.0%
TTACGTACAACCCAAATAAA+AGG + chr7_2:13598656-13598675 None:intergenic 30.0%
GGAAATCAAGGTAAAATTGT+TGG - chr7_2:13598722-13598741 Msa1049950:CDS 30.0%
ATCAAGGTAAAATTGTTGGT+TGG - chr7_2:13598726-13598745 Msa1049950:CDS 30.0%
GTAATGAAACATGCTATTGA+AGG + chr7_2:13598779-13598798 None:intergenic 30.0%
AAAAATGGCAAACACAACAA+AGG + chr7_2:13598848-13598867 None:intergenic 30.0%
AGACATATATTTGTGATGTG+TGG - chr7_2:13598888-13598907 Msa1049950:CDS 30.0%
ATATATTTGTGATGTGTGGA+AGG - chr7_2:13598892-13598911 Msa1049950:CDS 30.0%
AAAGGAAGAGATAAAGAAGA+AGG - chr7_2:13598955-13598974 Msa1049950:CDS 30.0%
AATGTGGGTTTCCCATTATA+GGG + chr7_2:13595341-13595360 None:intergenic 35.0%
AAATGTGGGTTTCCCATTAT+AGG + chr7_2:13595342-13595361 None:intergenic 35.0%
ATATGTCCAAGAATTGGGAA+TGG + chr7_2:13595375-13595394 None:intergenic 35.0%
GGATTCATATGTCCAAGAAT+TGG + chr7_2:13595381-13595400 None:intergenic 35.0%
! AGTGATTTTGCATCCATGTT+TGG + chr7_2:13595430-13595449 None:intergenic 35.0%
TCAATTATTGGTCATGAGCA+AGG - chr7_2:13595492-13595511 Msa1049950:CDS 35.0%
AATTTAGTATCTCTCCCAGA+TGG - chr7_2:13595537-13595556 Msa1049950:CDS 35.0%
CTCATCAGTTGGGAATTAAA+GGG - chr7_2:13595730-13595749 Msa1049950:CDS 35.0%
TCATCAGTTGGGAATTAAAG+GGG - chr7_2:13595731-13595750 Msa1049950:CDS 35.0%
! GTATGATTTTGTTGGATGCA+TGG - chr7_2:13596228-13596247 Msa1049950:CDS 35.0%
AATCAAGAAACGTGTTAGAC+AGG - chr7_2:13596254-13596273 Msa1049950:CDS 35.0%
ATCAAGAAACGTGTTAGACA+GGG - chr7_2:13596255-13596274 Msa1049950:CDS 35.0%
CAAAGCAGCAAAGCAAAAAT+GGG + chr7_2:13596985-13597004 None:intergenic 35.0%
ATGAGAGGCAAAACAATGAT+TGG - chr7_2:13597494-13597513 Msa1049950:intron 35.0%
GCAAAACAATGATTGGCATT+CGG - chr7_2:13597501-13597520 Msa1049950:intron 35.0%
ATCCAATTAGAGACTAATGG+TGG + chr7_2:13597736-13597755 None:intergenic 35.0%
TGCATCCAATTAGAGACTAA+TGG + chr7_2:13597739-13597758 None:intergenic 35.0%
GGAGTAATATTGAGTATGCT+AGG - chr7_2:13597923-13597942 Msa1049950:intron 35.0%
GGTTATCTTATCGCTATTAC+AGG + chr7_2:13598078-13598097 None:intergenic 35.0%
! ATTTAGAATGTGTGACTGTG+TGG + chr7_2:13598099-13598118 None:intergenic 35.0%
CTTGTATTGTTTGGTCAAGA+TGG - chr7_2:13598186-13598205 Msa1049950:intron 35.0%
CATCATATGAAGGAAGAAGA+AGG + chr7_2:13598348-13598367 None:intergenic 35.0%
GCATCTCTTTCATCATATGA+AGG + chr7_2:13598358-13598377 None:intergenic 35.0%
TAACACTAGTATGGATCTTG+AGG - chr7_2:13598409-13598428 Msa1049950:intron 35.0%
! TGGTAGAAACTTTGGTGATA+AGG + chr7_2:13598447-13598466 None:intergenic 35.0%
TCACCAAAGTTTCTACCAAT+TGG - chr7_2:13598449-13598468 Msa1049950:intron 35.0%
!! TTTTCCATTAGTGGACCAAT+TGG + chr7_2:13598467-13598486 None:intergenic 35.0%
GGAAAATGAGCATAACAACA+TGG - chr7_2:13598481-13598500 Msa1049950:intron 35.0%
ATAACAACATGGGATCTTTG+TGG - chr7_2:13598492-13598511 Msa1049950:intron 35.0%
! TTGGGTTGTACGTAAAGATA+AGG - chr7_2:13598661-13598680 Msa1049950:intron 35.0%
TGGGTTGTACGTAAAGATAA+GGG - chr7_2:13598662-13598681 Msa1049950:intron 35.0%
GATTTCCGTTGAATTCACTT+GGG + chr7_2:13598709-13598728 None:intergenic 35.0%
TGATTTCCGTTGAATTCACT+TGG + chr7_2:13598710-13598729 None:intergenic 35.0%
AGTGAATTCAACGGAAATCA+AGG - chr7_2:13598710-13598729 Msa1049950:CDS 35.0%
GCATGTTTCATTACACATTG+TGG - chr7_2:13598785-13598804 Msa1049950:CDS 35.0%
CAAGTTTATCAATTGGGCAA+AGG - chr7_2:13599075-13599094 Msa1049950:CDS 35.0%
GAATGAACATGCGAGTATTT+CGG + chr7_2:13599180-13599199 None:intergenic 35.0%
TTCTACCAGCTTCCCTATAA+TGG - chr7_2:13595326-13595345 Msa1049950:three_prime_UTR 40.0%
TCTACCAGCTTCCCTATAAT+GGG - chr7_2:13595327-13595346 Msa1049950:three_prime_UTR 40.0%
GCAATACCATTCCCAATTCT+TGG - chr7_2:13595366-13595385 Msa1049950:three_prime_UTR 40.0%
!!! TCTCATGTTTTGGCCAAACA+TGG - chr7_2:13595414-13595433 Msa1049950:three_prime_UTR 40.0%
TCATGAGCAAGGAAAAGTCA+AGG - chr7_2:13595503-13595522 Msa1049950:CDS 40.0%
!! AAAAAATATGGGTTGGGCCT+TGG - chr7_2:13595701-13595720 Msa1049950:CDS 40.0%
TTGGAAGTTGCTCATCAGTT+GGG - chr7_2:13595720-13595739 Msa1049950:CDS 40.0%
GCTCATCAGTTGGGAATTAA+AGG - chr7_2:13595729-13595748 Msa1049950:CDS 40.0%
! GAATTAAAGGGGCTCTTTTC+TGG - chr7_2:13595742-13595761 Msa1049950:CDS 40.0%
AGAAACCAATGAAGTTGCTG+AGG + chr7_2:13595772-13595791 None:intergenic 40.0%
!!! CTCTATGGAGAGTTTTGTTG+AGG - chr7_2:13595797-13595816 Msa1049950:CDS 40.0%
!!! ATGGAGAGTTTTGTTGAGGA+AGG - chr7_2:13595801-13595820 Msa1049950:CDS 40.0%
GGAATTATAGATCCTCGAAG+TGG - chr7_2:13595822-13595841 Msa1049950:CDS 40.0%
AATGCTTAGATGAGATGACG+AGG - chr7_2:13596306-13596325 Msa1049950:intron 40.0%
ATGCTTAGATGAGATGACGA+GGG - chr7_2:13596307-13596326 Msa1049950:intron 40.0%
CAGCAGCGTTAAAACTCTTA+GGG - chr7_2:13596375-13596394 Msa1049950:intron 40.0%
! CACTTGAACTTGCTCTTCTA+GGG + chr7_2:13596728-13596747 None:intergenic 40.0%
! TCACTTGAACTTGCTCTTCT+AGG + chr7_2:13596729-13596748 None:intergenic 40.0%
AGAAGAGCAAGTTCAAGTGA+TGG - chr7_2:13596729-13596748 Msa1049950:intron 40.0%
GCAAAGCAGCAAAGCAAAAA+TGG + chr7_2:13596986-13597005 None:intergenic 40.0%
! TTTTGCCTCTCATAGCATGA+GGG + chr7_2:13597487-13597506 None:intergenic 40.0%
!! TAGAGAGTACCAAAAGGAGA+GGG + chr7_2:13597552-13597571 None:intergenic 40.0%
!! CTCTACTAGAGAGTACCAAA+AGG + chr7_2:13597558-13597577 None:intergenic 40.0%
TCTGCAAGGGTTCCTAAAAA+TGG + chr7_2:13597693-13597712 None:intergenic 40.0%
!! TTTTTAGGAACCCTTGCAGA+TGG - chr7_2:13597693-13597712 Msa1049950:intron 40.0%
!! TTTTAGGAACCCTTGCAGAT+GGG - chr7_2:13597694-13597713 Msa1049950:intron 40.0%
! TGCCACCATTAGTCTCTAAT+TGG - chr7_2:13597731-13597750 Msa1049950:intron 40.0%
! TTGGAATTTCAGGTCTTCCA+AGG - chr7_2:13598246-13598265 Msa1049950:intron 40.0%
GTATGAATTTAGGAGAGTGG+TGG - chr7_2:13598381-13598400 Msa1049950:intron 40.0%
!! GTGGCTTTGTAACACTAGTA+TGG - chr7_2:13598400-13598419 Msa1049950:intron 40.0%
GGACCAATTGGTAGAAACTT+TGG + chr7_2:13598455-13598474 None:intergenic 40.0%
TCTACCAATTGGTCCACTAA+TGG - chr7_2:13598460-13598479 Msa1049950:intron 40.0%
GCATACCCAAGTGAATTCAA+CGG - chr7_2:13598701-13598720 Msa1049950:intron 40.0%
GTTTCATTACACATTGTGGC+TGG - chr7_2:13598789-13598808 Msa1049950:CDS 40.0%
ATTTGTGATGTGTGGAAGGT+TGG - chr7_2:13598896-13598915 Msa1049950:CDS 40.0%
GGAAGAGATAAAGAAGAAGG+TGG - chr7_2:13598958-13598977 Msa1049950:CDS 40.0%
AATCGCTACTTAGTCAGACA+TGG - chr7_2:13599123-13599142 Msa1049950:CDS 40.0%
GTAGGACAAATGATCCATGA+TGG + chr7_2:13599150-13599169 None:intergenic 40.0%
! TATCAAGATCTAAGGCTCAG+TGG + chr7_2:13599230-13599249 None:intergenic 40.0%
TATAGGGAAGCTGGTAGAAG+TGG + chr7_2:13595325-13595344 None:intergenic 45.0%
GTTTCCCATTATAGGGAAGC+TGG + chr7_2:13595334-13595353 None:intergenic 45.0%
TGAGCTCATAGTGGTTCTTG+TGG + chr7_2:13595610-13595629 None:intergenic 45.0%
!! AGGAAGCATTGAGCTCATAG+TGG + chr7_2:13595619-13595638 None:intergenic 45.0%
CAACTGATGAGCAACTTCCA+AGG + chr7_2:13595721-13595740 None:intergenic 45.0%
CTTGGAAGTTGCTCATCAGT+TGG - chr7_2:13595719-13595738 Msa1049950:CDS 45.0%
GCAGCAGCGTTAAAACTCTT+AGG - chr7_2:13596374-13596393 Msa1049950:intron 45.0%
AGAGCAAGTTCAAGTGATGG+AGG - chr7_2:13596732-13596751 Msa1049950:intron 45.0%
AGCAGCAAAGCAAAAATGGG+AGG + chr7_2:13596982-13597001 None:intergenic 45.0%
TCACGAGCATTATAACAGGG+AGG + chr7_2:13597065-13597084 None:intergenic 45.0%
CAAATGAAGGAGCTGATGAG+AGG - chr7_2:13597452-13597471 Msa1049950:intron 45.0%
TTTGCCTCTCATAGCATGAG+GGG + chr7_2:13597486-13597505 None:intergenic 45.0%
! GTTTTGCCTCTCATAGCATG+AGG + chr7_2:13597488-13597507 None:intergenic 45.0%
!! CTAGAGAGTACCAAAAGGAG+AGG + chr7_2:13597553-13597572 None:intergenic 45.0%
AGACTAATGGTGGCAAGCAT+GGG + chr7_2:13597726-13597745 None:intergenic 45.0%
ATTGCAGCTGCTTCCATCAT+AGG + chr7_2:13598302-13598321 None:intergenic 45.0%
TGATGTGTGGAAGGTTGGAT+TGG - chr7_2:13598901-13598920 Msa1049950:CDS 45.0%
GATGTGTGGAAGGTTGGATT+GGG - chr7_2:13598902-13598921 Msa1049950:CDS 45.0%
TAGTCAGACATGGTCCATCA+TGG - chr7_2:13599133-13599152 Msa1049950:CDS 45.0%
GAGTATTTCGGTGGACAAGT+AGG + chr7_2:13599168-13599187 None:intergenic 45.0%
TGAACATGCGAGTATTTCGG+TGG + chr7_2:13599177-13599196 None:intergenic 45.0%
!!! ATTTTTCTTATATTTAATAT+CGG + chr7_2:13596497-13596516 None:intergenic 5.0%
!!! TATAATTATTTTGATAATTT+TGG + chr7_2:13597361-13597380 None:intergenic 5.0%
CTTGAGGACTCACACCATCT+GGG + chr7_2:13595554-13595573 None:intergenic 50.0%
TCTTGAGGACTCACACCATC+TGG + chr7_2:13595555-13595574 None:intergenic 50.0%
ACCAATGAAGTTGCTGAGGC+TGG + chr7_2:13595768-13595787 None:intergenic 50.0%
GGAGAGTTAGCCACCCATTT+GGG - chr7_2:13596396-13596415 Msa1049950:intron 50.0%
! GAAGTCTCTCCCTCTCCTTT+TGG - chr7_2:13597540-13597559 Msa1049950:intron 50.0%
GAGACTAATGGTGGCAAGCA+TGG + chr7_2:13597727-13597746 None:intergenic 50.0%
GTGGCGAAGAACAAAGCAGA+AGG - chr7_2:13599037-13599056 Msa1049950:CDS 50.0%
GCCAGCCTCAGCAACTTCAT+TGG - chr7_2:13595764-13595783 Msa1049950:CDS 55.0%
GGGAGAGTTAGCCACCCATT+TGG - chr7_2:13596395-13596414 Msa1049950:intron 55.0%
CCTTGTGAGACCCAAATGGG+TGG + chr7_2:13596409-13596428 None:intergenic 55.0%
CCACCCATTTGGGTCTCACA+AGG - chr7_2:13596406-13596425 Msa1049950:intron 55.0%
! GGGCCTTGTGAGACCCAAAT+GGG + chr7_2:13596412-13596431 None:intergenic 55.0%
CCTCTCATAGCATGAGGGGA+AGG + chr7_2:13597482-13597501 None:intergenic 55.0%
CCTTCCCCTCATGCTATGAG+AGG - chr7_2:13597479-13597498 Msa1049950:intron 55.0%
TGGAAGCAGCTGCAATGCCA+TGG - chr7_2:13598306-13598325 Msa1049950:intron 55.0%
! CGGGCCTTGTGAGACCCAAA+TGG + chr7_2:13596413-13596432 None:intergenic 60.0%
! GGGCTCTAGCCCATCTGCAA+GGG + chr7_2:13597706-13597725 None:intergenic 60.0%
! TGGGCTCTAGCCCATCTGCA+AGG + chr7_2:13597707-13597726 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 13595269 13599284 13595269 ID=Msa1049950;Name=Msa1049950
chr7_2 mRNA 13595269 13599284 13595269 ID=Msa1049950-mRNA-1;Parent=Msa1049950;Name=Msa1049950-mRNA-1;_AED=0.01;_eAED=0.01;_QI=76|1|1|1|1|1|2|182|447
chr7_2 exon 13595269 13596295 13595269 ID=Msa1049950-mRNA-1:exon:3389;Parent=Msa1049950-mRNA-1
chr7_2 exon 13598710 13599284 13598710 ID=Msa1049950-mRNA-1:exon:3388;Parent=Msa1049950-mRNA-1
chr7_2 five_prime_UTR 13599209 13599284 13599209 ID=Msa1049950-mRNA-1:five_prime_utr;Parent=Msa1049950-mRNA-1
chr7_2 CDS 13598710 13599208 13598710 ID=Msa1049950-mRNA-1:cds;Parent=Msa1049950-mRNA-1
chr7_2 CDS 13595451 13596295 13595451 ID=Msa1049950-mRNA-1:cds;Parent=Msa1049950-mRNA-1
chr7_2 three_prime_UTR 13595269 13595450 13595269 ID=Msa1049950-mRNA-1:three_prime_utr;Parent=Msa1049950-mRNA-1
Gene Sequence

>Msa1049950

ATGGGAAACCCACATTTTCTTGCAATACCATTCCCAATTCTTGGACATATGAATCCCCTTATGCAATTTTCTCATGTTTTGGCCAAACATGGATGCAAAATCACTTTCTTGACTTCAGATGAAAATTACAATAAAATGAAGACAACTTCAATTATTGGTCATGAGCAAGGAAAAGTCAAGGAATCAAACATAAATTTAGTATCTCTCCCAGATGGTGTGAGTCCTCAAGATGATAGAAAAGATGTGGCCAAAGTTATTTTGTCCACAAGAACCACTATGAGCTCAATGCTTCCTAAACTCATAGAAGAGATAAATGCTCTTGATAGTGACGACAAGATTTCTTGTATAATTGTCACAAAAAATATGGGTTGGGCCTTGGAAGTTGCTCATCAGTTGGGAATTAAAGGGGCTCTTTTCTGGCCAGCCTCAGCAACTTCATTGGTTTCTTTTAACTCTATGGAGAGTTTTGTTGAGGAAGGAATTATAGATCCTCGAAGTGGTCTTCCAAGGAAACAAGAAATTCAACTTTCTTCAAATTTGCCTATGATGGAAGCAGCTGCAATGCCATGGTATAACTTAAGTAATGCCTTCTTCTTCCTTCATATGATGAAAGAGATGCAAAGTATGAATTTAGGAGAGTGGTGGCTTTGTAACACTAGTATGGATCTTGAGGCTGAAGCAATTTCCTTATCACCAAAGTTTCTACCAATTGGTCCACTAATGGAAAATGAGCATAACAACATGGGATCTTTGTGGCAAGAAGATGAAACATGCATAGAATGGTTAGATCAATATCCACCTAAATCTGTCTTATATGTTTCATTTGGTAGTTTGATATCAATTTGTCCAAACCAATTCAAAGAATTAGCTCTAGGGCTTGATCTCCTTAAGATACCTTTTATTTGGGTTGTACGTAAAGATAAGGGCAATGAGACAAAATATGCATACCCAAGTGAATTCAACGGAAATCAAGGTAAAATTGTTGGTTGGTCACCACAAAAAAAGATTTTGAGTCACCCTTCAATAGCATGTTTCATTACACATTGTGGCTGGAATTCTACTATAGAAAGTGTGTATAATGGGGTGCCTTTGTTGTGTTTGCCATTTTTTAGTGATCAACTTATGAACAAGACATATATTTGTGATGTGTGGAAGGTTGGATTGGGATTTGAAAAAGATGAAAATGGATTAATAACAAAGGAAGAGATAAAGAAGAAGGTGGATCAATTACTTGAAGATGAAGAAATTAAAGAAAGATCTTTGAAATTAATGACAATGGTGGCGAAGAACAAAGCAGAAGGAGATAAGAATTTAAACAAGTTTATCAATTGGGCAAAGGAATAG
Protein sequence

>Msa1049950

MGNPHFLAIPFPILGHMNPLMQFSHVLAKHGCKITFLTSDENYNKMKTTSIIGHEQGKVKESNINLVSLPDGVSPQDDRKDVAKVILSTRTTMSSMLPKLIEEINALDSDDKISCIIVTKNMGWALEVAHQLGIKGALFWPASATSLVSFNSMESFVEEGIIDPRSGLPRKQEIQLSSNLPMMEAAAMPWYNLSNAFFFLHMMKEMQSMNLGEWWLCNTSMDLEAEAISLSPKFLPIGPLMENEHNNMGSLWQEDETCIEWLDQYPPKSVLYVSFGSLISICPNQFKELALGLDLLKIPFIWVVRKDKGNETKYAYPSEFNGNQGKIVGWSPQKKILSHPSIACFITHCGWNSTIESVYNGVPLLCLPFFSDQLMNKTYICDVWKVGLGFEKDENGLITKEEIKKKVDQLLEDEEIKERSLKLMTMVAKNKAEGDKNLNKFINWAKE*