AlfalfaGEDB | Msa0240890

M. sativa cultivar zhongmu-4 / Msa0240890

KEGG: K19042
GO: GO:0001101 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006464 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009719 GO:0009725 GO:0009739 GO:0009892 GO:0009987 GO:0010033 GO:0010466 GO:0010605 GO:0010941 GO:0010951 GO:0016567 GO:0016740 GO:0019222 GO:0019538 GO:0019787 GO:0030162 GO:0031323 GO:0031324 GO:0032268 GO:0032269 GO:0032446 GO:0033993 GO:0036211 GO:0042221 GO:0042742 GO:0043067 GO:0043069 GO:0043086 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044092 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045861 GO:0048519 GO:0048523 GO:0050789 GO:0050790 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051172 GO:0051246 GO:0051248 GO:0051336 GO:0051346 GO:0051704 GO:0051707 GO:0052547 GO:0052548 GO:0060255 GO:0060548 GO:0065007 GO:0065009 GO:0070647 GO:0071704 GO:0080090 GO:0098542 GO:0140096 GO:1901564 GO:1901700 GO:2000116 GO:2000117
PFAM: PF13920.9

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0240890	XP_003594454.1	97.179	319	6	2	1	316	1	319	0.0	637

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0240890	sp\|Q9FHE4\|BRG1_ARATH	46.154	325	134	10	1	316	1	293	1.95e-78	244

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0240890	G7IFV4	97.179	319	6	2	1	316	1	319	0.0	637

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0079180	Msa0240890	0.803806	2.923398e-49	-8.615850e-47
Msa0240890	Msa0267370	0.800201	1.610213e-48	-8.615850e-47
Msa0240890	Msa0317520	0.826111	3.246162e-54	-8.615850e-47
Msa0240890	Msa0342750	0.803566	3.279755e-49	-8.615850e-47
Msa0240890	Msa0411390	0.803819	2.905478e-49	-8.615850e-47
Msa0240890	Msa0464100	0.802080	6.648887e-49	-8.615850e-47
Msa0240890	Msa0464120	0.803730	3.032864e-49	-8.615850e-47
Msa0240890	Msa0518380	0.814868	1.237007e-51	-8.615850e-47
Msa0240890	Msa0681250	0.815111	1.093136e-51	-8.615850e-47
Msa0240890	Msa0681270	0.810946	8.951321e-51	-8.615850e-47
Msa0240890	Msa0969600	0.806470	8.099562e-50	-8.615850e-47
Msa0240890	Msa1036610	0.804397	2.203062e-49	-8.615850e-47
Msa0240890	Msa1121490	0.802870	4.569546e-49	-8.615850e-47
Msa0240890	Msa1162780	0.801459	8.913458e-49	-8.615850e-47
Msa0240890	Msa1225130	0.804076	2.569353e-49	-8.615850e-47
Msa0240890	Msa1425260	0.834675	2.613487e-56	-8.615850e-47
Msa0240890	Msa1427230	0.801927	7.146913e-49	-8.615850e-47
Msa0240890	Msa1460830	0.804767	1.844222e-49	-8.615850e-47
Msa0240890	Msa1466540	0.800978	1.118070e-48	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0240890	MtrunA17_Chr2g0291661	97.179	319	6	2	1	316	1	319	0.0	637
Msa0240890	MtrunA17_Chr4g0043501	49.226	323	127	10	1	316	1	293	3.03e-95	283
Msa0240890	MtrunA17_Chr2g0311981	40.214	373	159	15	1	316	1	366	4.82e-70	221
Msa0240890	MtrunA17_Chr8g0358261	37.457	291	148	7	58	315	20	309	1.26e-54	180
Msa0240890	MtrunA17_Chr5g0400041	31.863	204	117	4	124	316	143	335	5.30e-27	108
Msa0240890	MtrunA17_Chr3g0145641	35.955	178	88	5	127	303	18	170	3.24e-23	94.4
Msa0240890	MtrunA17_Chr1g0153261	30.481	187	129	1	119	305	145	330	1.84e-22	95.9
Msa0240890	MtrunA17_Chr4g0018631	27.358	212	130	3	102	303	2	199	6.06e-22	92.0
Msa0240890	MtrunA17_Chr4g0055201	31.604	212	131	4	111	316	129	332	7.09e-21	91.3
Msa0240890	MtrunA17_Chr4g0017891	26.087	184	116	4	125	308	78	241	1.08e-14	72.8
Msa0240890	MtrunA17_Chr2g0319361	26.562	192	125	5	113	303	64	240	1.09e-13	69.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0240890	AT5G45100.1	46.154	325	134	10	1	316	1	293	1.98e-79	244
Msa0240890	AT4G19700.1	46.894	322	146	9	1	316	1	303	2.84e-77	238
Msa0240890	AT5G45100.2	51.807	249	102	6	73	316	31	266	9.85e-75	231
Msa0240890	AT3G12920.1	38.857	350	164	12	1	316	1	334	1.16e-62	202
Msa0240890	AT1G79110.3	47.748	222	91	4	116	316	115	332	2.76e-54	180
Msa0240890	AT1G79110.2	48.624	218	95	3	116	316	137	354	4.19e-54	181
Msa0240890	AT1G79110.1	47.964	221	95	4	116	316	137	357	5.08e-52	175
Msa0240890	AT1G45976.1	32.673	202	125	4	107	305	122	315	3.28e-28	111
Msa0240890	AT1G60610.2	31.628	215	137	3	106	313	126	337	4.02e-25	103
Msa0240890	AT1G60610.4	31.628	215	137	3	106	313	126	337	4.02e-25	103
Msa0240890	AT1G60610.1	31.628	215	137	3	106	313	126	337	4.02e-25	103
Msa0240890	AT1G60610.5	31.628	215	137	3	106	313	126	337	4.02e-25	103
Msa0240890	AT1G60610.3	31.628	215	137	3	106	313	126	337	4.02e-25	103
Msa0240890	AT1G10650.2	31.604	212	125	4	116	316	81	283	9.76e-24	98.6
Msa0240890	AT1G10650.1	31.604	212	125	4	116	316	137	339	2.53e-23	98.6
Msa0240890	AT4G35070.2	30.055	183	122	3	124	305	22	199	9.11e-21	89.0
Msa0240890	AT4G35070.1	30.055	183	122	3	124	305	77	254	1.04e-20	90.1
Msa0240890	AT1G32740.3	30.531	226	136	7	101	311	44	263	3.61e-20	88.6
Msa0240890	AT1G32740.2	30.531	226	136	7	101	311	44	263	3.61e-20	88.6
Msa0240890	AT1G32740.1	30.531	226	136	7	101	311	88	307	4.05e-20	89.4
Msa0240890	AT1G32740.4	30.531	226	136	7	101	311	77	296	5.45e-20	88.6
Msa0240890	AT5G47050.1	26.800	250	155	4	71	316	75	300	1.02e-18	85.1
Msa0240890	AT4G17680.1	25.385	260	153	7	87	313	61	312	2.53e-18	84.3
Msa0240890	AT4G17680.2	25.628	199	134	4	121	313	50	240	2.16e-17	80.5
Msa0240890	AT4G17680.3	26.087	184	122	4	136	313	13	188	7.34e-14	69.3
Msa0240890	AT2G12290.1	49.231	65	32	1	179	243	28	91	1.87e-11	61.2

Find 71 sgRNAs with CRISPR-Local

Find 262 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AATAGATGTGGCTAAGTATT+AGG	0.196357	2_2:+16279464	None:intergenic
CAAATTGTTACGTAAATAAT+TGG	0.209804	2_2:+16277690	None:intergenic
CAAACATTGGATTGATAAAA+TGG	0.230510	2_2:+16278774	None:intergenic
AAAGAATAGGGAAGCTAAAT+TGG	0.250485	2_2:-16277792	Msa0240890:CDS
CAATTATTTACGTAACAATT+TGG	0.251798	2_2:-16277689	Msa0240890:CDS
AGTACCTGTTTGTGAGTAAA+TGG	0.303204	2_2:+16279254	None:intergenic
TTGTGTTGTTACTACCTTGT+AGG	0.317083	2_2:-16277492	Msa0240890:CDS
GATGAAGAGATTCAAAGAAT+AGG	0.332254	2_2:-16277805	Msa0240890:CDS
AAGAGATTTCTCAACTGAAT+TGG	0.342288	2_2:-16278691	Msa0240890:CDS
ATGAAGAGATTCAAAGAATA+GGG	0.348961	2_2:-16277804	Msa0240890:CDS
AAGTTTAAGTGCTGAAAATC+AGG	0.355207	2_2:-16277749	Msa0240890:CDS
GAAAGTGAGAATGGAGTTAG+AGG	0.361074	2_2:-16277902	Msa0240890:CDS
AGAGAGAGTTTGGTTTGGTT+TGG	0.377799	2_2:+16279374	None:intergenic
GTATTGTTTGTGAGATTTAG+AGG	0.379269	2_2:+16279396	None:intergenic
ATTGTGTGTGAGAGAGAGTT+TGG	0.387338	2_2:+16279364	None:intergenic
AAGGCTTAGTATTTAGCCTT+TGG	0.390285	2_2:+16279518	None:intergenic
TAACAATTTGGAACAAGTTA+TGG	0.392210	2_2:-16277677	Msa0240890:CDS
GACTGTCGGTGGTGGTGGTT+TGG	0.395247	2_2:-16277551	Msa0240890:CDS
AATGAATGAATGAATGATTC+AGG	0.399157	2_2:+16279494	None:intergenic
TGCGATCAATATCAGATTGC+TGG	0.414409	2_2:+16278580	None:intergenic
ATCAATATGTTATTACAGTT+AGG	0.418528	2_2:-16277289	Msa0240890:three_prime_UTR
ATAGATGTGGCTAAGTATTA+GGG	0.422835	2_2:+16279465	None:intergenic
TCGGTGGTGGTGGTTTGGTT+AGG	0.423324	2_2:-16277546	Msa0240890:CDS
AGACCACTATCAGCTCTGTT+TGG	0.425440	2_2:+16278747	None:intergenic
GTTAGGATGTGTAAGAATTG+TGG	0.438375	2_2:-16277529	Msa0240890:CDS
ATGACGCTGAATCAAGTTGC+GGG	0.450434	2_2:-16277612	Msa0240890:CDS
CTAGCCATTTACTCACAAAC+AGG	0.450456	2_2:-16279258	Msa0240890:intron
TAAGTGCTGAAAATCAGGTT+TGG	0.460640	2_2:-16277744	Msa0240890:CDS
TGTGTCTTTGCAATGTGTGC+GGG	0.482250	2_2:-16277465	Msa0240890:CDS
TCATCATGCCGCGGTGGCCG+AGG	0.489697	2_2:-16277635	Msa0240890:CDS
CAAAGACACAAATGCCTACA+AGG	0.490855	2_2:+16277478	None:intergenic
GCGGCGACTGTCGGTGGTGG+TGG	0.490968	2_2:-16277556	Msa0240890:CDS
TTAGGATGTGTAAGAATTGT+GGG	0.497897	2_2:-16277528	Msa0240890:CDS
TCATGCATTGTTGTTTGAAG+AGG	0.503156	2_2:+16278807	None:intergenic
ACAGAATGAGAAAGTGAGAA+TGG	0.506503	2_2:-16277911	Msa0240890:intron
AATGAAAGAAGAGAATAAGA+AGG	0.510715	2_2:+16279421	None:intergenic
TGCTGAAAATCAGGTTTGGA+GGG	0.519581	2_2:-16277740	Msa0240890:CDS
GTGTAAGAATTGTGGGGTGA+GGG	0.520811	2_2:-16277521	Msa0240890:CDS
GTGCTGAAAATCAGGTTTGG+AGG	0.526743	2_2:-16277741	Msa0240890:CDS
TGTGTAAGAATTGTGGGGTG+AGG	0.539846	2_2:-16277522	Msa0240890:CDS
GTGTGAGAGAGAGTTTGGTT+TGG	0.542044	2_2:+16279369	None:intergenic
GAATCAAGTTGCGGGAGTAA+TGG	0.542943	2_2:-16277604	Msa0240890:CDS
GTGTCTTCACCGTCATCAGC+CGG	0.547188	2_2:+16277580	None:intergenic
AAATGTCCAGTGTGTGACTC+TGG	0.547650	2_2:-16277430	Msa0240890:CDS
ACCGCGGCGACTGTCGGTGG+TGG	0.548750	2_2:-16277559	Msa0240890:CDS
AAGTTGCGGGAGTAATGGTC+CGG	0.555411	2_2:-16277599	Msa0240890:CDS
TCTGTTTGGATCACAAACAT+TGG	0.555502	2_2:+16278761	None:intergenic
TGAATTATACAATGTTCAGA+TGG	0.557789	2_2:-16278841	Msa0240890:CDS
AATGAGGCAATCAAGGATGT+TGG	0.559955	2_2:-16277872	Msa0240890:CDS
ATGAATGAATGATTCAGGTA+AGG	0.561034	2_2:+16279499	None:intergenic
ACTTGATTCAGCGTCATCCT+CGG	0.566430	2_2:+16277618	None:intergenic
GAAGACACCGCGGCGACTGT+CGG	0.571935	2_2:-16277565	Msa0240890:CDS
TTGTGTCTTTGCAATGTGTG+CGG	0.572306	2_2:-16277466	Msa0240890:CDS
AGTAATGGTCCGGCTGATGA+CGG	0.578791	2_2:-16277589	Msa0240890:CDS
TTTGTGAGTAAATGGCTAGA+AGG	0.583293	2_2:+16279262	None:intergenic
TCCAGTGTGTGACTCTGGCA+TGG	0.597448	2_2:-16277425	Msa0240890:CDS
CACTGGACATTTACGAACAG+TGG	0.609918	2_2:+16277441	None:intergenic
GACACCGCGGCGACTGTCGG+TGG	0.614188	2_2:-16277562	Msa0240890:CDS
AGTTATGGCACATGTCAATG+AGG	0.626941	2_2:-16277662	Msa0240890:CDS
GATCCAAACAGAGCTGATAG+TGG	0.638226	2_2:-16278750	Msa0240890:CDS
AAGAGAGCATGCAATAGATG+TGG	0.641776	2_2:+16279452	None:intergenic
GATGACGCTGAATCAAGTTG+CGG	0.648882	2_2:-16277613	Msa0240890:CDS
GTTATGGCACATGTCAATGA+GGG	0.650135	2_2:-16277661	Msa0240890:CDS
TCCATGCCAGAGTCACACAC+TGG	0.661955	2_2:+16277424	None:intergenic
AGCGTCATCCTCGGCCACCG+CGG	0.663608	2_2:+16277627	None:intergenic
GGGACATCATCATGCCGCGG+TGG	0.672478	2_2:-16277641	Msa0240890:CDS
GATGTGGCTAAGTATTAGGG+AGG	0.685113	2_2:+16279468	None:intergenic
TGAGGGACATCATCATGCCG+CGG	0.685255	2_2:-16277644	Msa0240890:CDS
ACCACCACCGACAGTCGCCG+CGG	0.694431	2_2:+16277558	None:intergenic
TAGGATGTGTAAGAATTGTG+GGG	0.749557	2_2:-16277527	Msa0240890:CDS
TGATGACGGTGAAGACACCG+CGG	0.808171	2_2:-16277575	Msa0240890:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAAAATAAATAAATTATATT+TGG	-	chr2_2:16278619-16278638	Msa0240890:CDS	0.0%
!!	AAAATAAATAAATTATATTT+GGG	-	chr2_2:16278620-16278639	Msa0240890:CDS	0.0%
!!	AAAAATAAATAAATTATATT+TGG	-	chr2_2:16278619-16278638	Msa0240890:CDS	0.0%
!!	AAAATAAATAAATTATATTT+GGG	-	chr2_2:16278620-16278639	Msa0240890:CDS	0.0%
!!!	TTAAAAAATAATCGTTTTAA+AGG	+	chr2_2:16277825-16277844	None:intergenic	10.0%
!!!	TATTTTTATGATAATCAAAA+CGG	+	chr2_2:16278606-16278625	None:intergenic	10.0%
!!!	ATAAACTAATTTTCTATAAA+AGG	-	chr2_2:16278653-16278672	Msa0240890:CDS	10.0%
!!!	TATTTTTGCTAATATTTTTA+TGG	-	chr2_2:16278765-16278784	Msa0240890:CDS	10.0%
!!!	TTAAAAAATAATCGTTTTAA+AGG	+	chr2_2:16277825-16277844	None:intergenic	10.0%
!!!	TATTTTTATGATAATCAAAA+CGG	+	chr2_2:16278606-16278625	None:intergenic	10.0%
!!!	ATAAACTAATTTTCTATAAA+AGG	-	chr2_2:16278653-16278672	Msa0240890:CDS	10.0%
!!!	TATTTTTGCTAATATTTTTA+TGG	-	chr2_2:16278765-16278784	Msa0240890:CDS	10.0%
!!!	ATTCTTTGTTTAATTTATAC+AGG	-	chr2_2:16277868-16277887	Msa0240890:CDS	15.0%
!!!	TTCTTTGTTTAATTTATACA+GGG	-	chr2_2:16277869-16277888	Msa0240890:CDS	15.0%
!!	ACTTTGAATGAAAATATTAA+TGG	-	chr2_2:16278427-16278446	Msa0240890:intron	15.0%
!!	CTTTGAATGAAAATATTAAT+GGG	-	chr2_2:16278428-16278447	Msa0240890:intron	15.0%
!!	TTTGAATGAAAATATTAATG+GGG	-	chr2_2:16278429-16278448	Msa0240890:intron	15.0%
!!!	TTTAAGTTTTTTTTAACATG+TGG	-	chr2_2:16278545-16278564	Msa0240890:intron	15.0%
!!!	ATTCTTTGTTTAATTTATAC+AGG	-	chr2_2:16277868-16277887	Msa0240890:CDS	15.0%
!!!	TTCTTTGTTTAATTTATACA+GGG	-	chr2_2:16277869-16277888	Msa0240890:CDS	15.0%
!!	ACTTTGAATGAAAATATTAA+TGG	-	chr2_2:16278427-16278446	Msa0240890:intron	15.0%
!!	CTTTGAATGAAAATATTAAT+GGG	-	chr2_2:16278428-16278447	Msa0240890:intron	15.0%
!!	TTTGAATGAAAATATTAATG+GGG	-	chr2_2:16278429-16278448	Msa0240890:intron	15.0%
!!!	TTTAAGTTTTTTTTAACATG+TGG	-	chr2_2:16278545-16278564	Msa0240890:intron	15.0%
!!!	AGAAAAGATGTTTTTTGATA+AGG	+	chr2_2:16277475-16277494	None:intergenic	20.0%
!!!	TCAAAAAACATCTTTTCTTA+TGG	-	chr2_2:16277477-16277496	Msa0240890:CDS	20.0%
!!!	GTACTATATTTTTGTCTTTA+AGG	-	chr2_2:16277555-16277574	Msa0240890:CDS	20.0%
!!	TTGTGTTTGAAAAAGAAAAA+AGG	-	chr2_2:16278326-16278345	Msa0240890:intron	20.0%
!!	TAAATTGAGTAACTGATAAA+GGG	-	chr2_2:16278388-16278407	Msa0240890:intron	20.0%
!!!	GGTGTTTTATATTTTCTAAA+AGG	-	chr2_2:16278450-16278469	Msa0240890:intron	20.0%
!!!	TTTCTTTTTAAATTATGGAG+TGG	-	chr2_2:16278492-16278511	Msa0240890:intron	20.0%
!!!	TTCTTTTTAAATTATGGAGT+GGG	-	chr2_2:16278493-16278512	Msa0240890:intron	20.0%
!!	AGAAAACTTTAATGGTAATA+GGG	-	chr2_2:16278568-16278587	Msa0240890:CDS	20.0%
!!	TAATTACACATAAATAGTAC+AGG	+	chr2_2:16278835-16278854	None:intergenic	20.0%
!!	CAAATTGTTACGTAAATAAT+TGG	+	chr2_2:16279104-16279123	None:intergenic	20.0%
!!	CAATTATTTACGTAACAATT+TGG	-	chr2_2:16279102-16279121	Msa0240890:intron	20.0%
!!!	TTTTTTTGTCTGATTTGTAA+AGG	+	chr2_2:16279453-16279472	None:intergenic	20.0%
!!	ACAAATCAGACAAAAAAATT+AGG	-	chr2_2:16279455-16279474	Msa0240890:five_prime_UTR	20.0%
!!	CAAATCAGACAAAAAAATTA+GGG	-	chr2_2:16279456-16279475	Msa0240890:five_prime_UTR	20.0%
!!	ATCAATATGTTATTACAGTT+AGG	-	chr2_2:16279502-16279521	Msa0240890:five_prime_UTR	20.0%
!!!	AGAAAAGATGTTTTTTGATA+AGG	+	chr2_2:16277475-16277494	None:intergenic	20.0%
!!!	TCAAAAAACATCTTTTCTTA+TGG	-	chr2_2:16277477-16277496	Msa0240890:CDS	20.0%
!!!	GTACTATATTTTTGTCTTTA+AGG	-	chr2_2:16277555-16277574	Msa0240890:CDS	20.0%
!!	TTGTGTTTGAAAAAGAAAAA+AGG	-	chr2_2:16278326-16278345	Msa0240890:intron	20.0%
!!	TAAATTGAGTAACTGATAAA+GGG	-	chr2_2:16278388-16278407	Msa0240890:intron	20.0%
!!!	GGTGTTTTATATTTTCTAAA+AGG	-	chr2_2:16278450-16278469	Msa0240890:intron	20.0%
!!!	TTTCTTTTTAAATTATGGAG+TGG	-	chr2_2:16278492-16278511	Msa0240890:intron	20.0%
!!!	TTCTTTTTAAATTATGGAGT+GGG	-	chr2_2:16278493-16278512	Msa0240890:intron	20.0%
!!	AGAAAACTTTAATGGTAATA+GGG	-	chr2_2:16278568-16278587	Msa0240890:CDS	20.0%
!!	TAATTACACATAAATAGTAC+AGG	+	chr2_2:16278835-16278854	None:intergenic	20.0%
!!	CAAATTGTTACGTAAATAAT+TGG	+	chr2_2:16279104-16279123	None:intergenic	20.0%
!!	CAATTATTTACGTAACAATT+TGG	-	chr2_2:16279102-16279121	Msa0240890:intron	20.0%
!!!	TTTTTTTGTCTGATTTGTAA+AGG	+	chr2_2:16279453-16279472	None:intergenic	20.0%
!!	ACAAATCAGACAAAAAAATT+AGG	-	chr2_2:16279455-16279474	Msa0240890:five_prime_UTR	20.0%
!!	CAAATCAGACAAAAAAATTA+GGG	-	chr2_2:16279456-16279475	Msa0240890:five_prime_UTR	20.0%
!!	ATCAATATGTTATTACAGTT+AGG	-	chr2_2:16279502-16279521	Msa0240890:five_prime_UTR	20.0%
!!!	CCTTTGGTTTTTTTATATGT+GGG	+	chr2_2:16277260-16277279	None:intergenic	25.0%
!	AATGAATGAATGAATGATTC+AGG	+	chr2_2:16277300-16277319	None:intergenic	25.0%
!	AATGAAAGAAGAGAATAAGA+AGG	+	chr2_2:16277373-16277392	None:intergenic	25.0%
!!!	TGTAGTTTTAACTAAAACCA+CGG	+	chr2_2:16277676-16277695	None:intergenic	25.0%
!	TAGTTAAAACTACACTTTGT+AGG	-	chr2_2:16277682-16277701	Msa0240890:CDS	25.0%
!	TGAATTATACAATGTTCAGA+TGG	-	chr2_2:16277950-16277969	Msa0240890:intron	25.0%
!	CAAACATTGGATTGATAAAA+TGG	+	chr2_2:16278020-16278039	None:intergenic	25.0%
!!	ATTACTCTATTCTTTTGATG+AGG	+	chr2_2:16278137-16278156	None:intergenic	25.0%
!	AAAAAATTACATGATGAGCA+AGG	+	chr2_2:16278238-16278257	None:intergenic	25.0%
!	CTAAATTGAGTAACTGATAA+AGG	-	chr2_2:16278387-16278406	Msa0240890:intron	25.0%
!!	TCTTTTTAAATTATGGAGTG+GGG	-	chr2_2:16278494-16278513	Msa0240890:intron	25.0%
!	GAGAAAACTTTAATGGTAAT+AGG	-	chr2_2:16278567-16278586	Msa0240890:CDS	25.0%
!	ATGAAGAGATTCAAAGAATA+GGG	-	chr2_2:16278987-16279006	Msa0240890:intron	25.0%
!!	TAACAATTTGGAACAAGTTA+TGG	-	chr2_2:16279114-16279133	Msa0240890:intron	25.0%
!	ATTACAGTTAGGACAAAAAA+AGG	-	chr2_2:16279513-16279532	Msa0240890:five_prime_UTR	25.0%
!!!	CCTTTGGTTTTTTTATATGT+GGG	+	chr2_2:16277260-16277279	None:intergenic	25.0%
!	AATGAATGAATGAATGATTC+AGG	+	chr2_2:16277300-16277319	None:intergenic	25.0%
!	AATGAAAGAAGAGAATAAGA+AGG	+	chr2_2:16277373-16277392	None:intergenic	25.0%
!!!	TGTAGTTTTAACTAAAACCA+CGG	+	chr2_2:16277676-16277695	None:intergenic	25.0%
!	TAGTTAAAACTACACTTTGT+AGG	-	chr2_2:16277682-16277701	Msa0240890:CDS	25.0%
!	TGAATTATACAATGTTCAGA+TGG	-	chr2_2:16277950-16277969	Msa0240890:intron	25.0%
!	CAAACATTGGATTGATAAAA+TGG	+	chr2_2:16278020-16278039	None:intergenic	25.0%
!!	ATTACTCTATTCTTTTGATG+AGG	+	chr2_2:16278137-16278156	None:intergenic	25.0%
!	AAAAAATTACATGATGAGCA+AGG	+	chr2_2:16278238-16278257	None:intergenic	25.0%
!	CTAAATTGAGTAACTGATAA+AGG	-	chr2_2:16278387-16278406	Msa0240890:intron	25.0%
!!	TCTTTTTAAATTATGGAGTG+GGG	-	chr2_2:16278494-16278513	Msa0240890:intron	25.0%
!	GAGAAAACTTTAATGGTAAT+AGG	-	chr2_2:16278567-16278586	Msa0240890:CDS	25.0%
!	ATGAAGAGATTCAAAGAATA+GGG	-	chr2_2:16278987-16279006	Msa0240890:intron	25.0%
!!	TAACAATTTGGAACAAGTTA+TGG	-	chr2_2:16279114-16279133	Msa0240890:intron	25.0%
!	ATTACAGTTAGGACAAAAAA+AGG	-	chr2_2:16279513-16279532	Msa0240890:five_prime_UTR	25.0%
	CCCACATATAAAAAAACCAA+AGG	-	chr2_2:16277257-16277276	Msa0240890:three_prime_UTR	30.0%
!!!	GCCTTTGGTTTTTTTATATG+TGG	+	chr2_2:16277261-16277280	None:intergenic	30.0%
	ATGAATGAATGATTCAGGTA+AGG	+	chr2_2:16277295-16277314	None:intergenic	30.0%
	ATAGATGTGGCTAAGTATTA+GGG	+	chr2_2:16277329-16277348	None:intergenic	30.0%
	AATAGATGTGGCTAAGTATT+AGG	+	chr2_2:16277330-16277349	None:intergenic	30.0%
	GTATTGTTTGTGAGATTTAG+AGG	+	chr2_2:16277398-16277417	None:intergenic	30.0%
!!!	GATGTTTTTTGATAAGGCTA+AGG	+	chr2_2:16277469-16277488	None:intergenic	30.0%
	AATGACTAAGTGTTTGTGTT+TGG	+	chr2_2:16277757-16277776	None:intergenic	30.0%
	AAGAGATTTCTCAACTGAAT+TGG	-	chr2_2:16278100-16278119	Msa0240890:intron	30.0%
	GAGAGTAATTAAACAAGTGA+AGG	+	chr2_2:16278264-16278283	None:intergenic	30.0%
	ACATGTGGAGAAAACTTTAA+TGG	-	chr2_2:16278560-16278579	Msa0240890:intron	30.0%
	AGTTAGAGGAACAAAAAATG+AGG	-	chr2_2:16278903-16278922	Msa0240890:CDS	30.0%
	AACAAAAAATGAGGCAATCA+AGG	-	chr2_2:16278912-16278931	Msa0240890:intron	30.0%
	GATGAAGAGATTCAAAGAAT+AGG	-	chr2_2:16278986-16279005	Msa0240890:intron	30.0%
	AAAGAATAGGGAAGCTAAAT+TGG	-	chr2_2:16278999-16279018	Msa0240890:intron	30.0%
!!	AAGTTTAAGTGCTGAAAATC+AGG	-	chr2_2:16279042-16279061	Msa0240890:intron	30.0%
	TTAGGATGTGTAAGAATTGT+GGG	-	chr2_2:16279263-16279282	Msa0240890:CDS	30.0%
	CCCACATATAAAAAAACCAA+AGG	-	chr2_2:16277257-16277276	Msa0240890:three_prime_UTR	30.0%
!!!	GCCTTTGGTTTTTTTATATG+TGG	+	chr2_2:16277261-16277280	None:intergenic	30.0%
	ATGAATGAATGATTCAGGTA+AGG	+	chr2_2:16277295-16277314	None:intergenic	30.0%
	ATAGATGTGGCTAAGTATTA+GGG	+	chr2_2:16277329-16277348	None:intergenic	30.0%
	AATAGATGTGGCTAAGTATT+AGG	+	chr2_2:16277330-16277349	None:intergenic	30.0%
	GTATTGTTTGTGAGATTTAG+AGG	+	chr2_2:16277398-16277417	None:intergenic	30.0%
!!!	GATGTTTTTTGATAAGGCTA+AGG	+	chr2_2:16277469-16277488	None:intergenic	30.0%
	AATGACTAAGTGTTTGTGTT+TGG	+	chr2_2:16277757-16277776	None:intergenic	30.0%
	AAGAGATTTCTCAACTGAAT+TGG	-	chr2_2:16278100-16278119	Msa0240890:intron	30.0%
	GAGAGTAATTAAACAAGTGA+AGG	+	chr2_2:16278264-16278283	None:intergenic	30.0%
	ACATGTGGAGAAAACTTTAA+TGG	-	chr2_2:16278560-16278579	Msa0240890:intron	30.0%
	AGTTAGAGGAACAAAAAATG+AGG	-	chr2_2:16278903-16278922	Msa0240890:CDS	30.0%
	AACAAAAAATGAGGCAATCA+AGG	-	chr2_2:16278912-16278931	Msa0240890:intron	30.0%
	GATGAAGAGATTCAAAGAAT+AGG	-	chr2_2:16278986-16279005	Msa0240890:intron	30.0%
	AAAGAATAGGGAAGCTAAAT+TGG	-	chr2_2:16278999-16279018	Msa0240890:intron	30.0%
!!	AAGTTTAAGTGCTGAAAATC+AGG	-	chr2_2:16279042-16279061	Msa0240890:intron	30.0%
	TTAGGATGTGTAAGAATTGT+GGG	-	chr2_2:16279263-16279282	Msa0240890:CDS	30.0%
!	AAGGCTTAGTATTTAGCCTT+TGG	+	chr2_2:16277276-16277295	None:intergenic	35.0%
	TTTGTGAGTAAATGGCTAGA+AGG	+	chr2_2:16277532-16277551	None:intergenic	35.0%
	AGTACCTGTTTGTGAGTAAA+TGG	+	chr2_2:16277540-16277559	None:intergenic	35.0%
!!!	AGTTTTAACTAAAACCACGG+TGG	+	chr2_2:16277673-16277692	None:intergenic	35.0%
	AGTGTTTGTGTTTGGATTCA+CGG	+	chr2_2:16277749-16277768	None:intergenic	35.0%
	TAGTCATTAGAATCCATCGA+CGG	-	chr2_2:16277769-16277788	Msa0240890:CDS	35.0%
!!	TCATGCATTGTTGTTTGAAG+AGG	+	chr2_2:16277987-16278006	None:intergenic	35.0%
	TCTGTTTGGATCACAAACAT+TGG	+	chr2_2:16278033-16278052	None:intergenic	35.0%
!!	CTTGAACGTTTTCTTTGAAG+AGG	+	chr2_2:16278083-16278102	None:intergenic	35.0%
!	ACTCTATTCTTTTGATGAGG+TGG	+	chr2_2:16278134-16278153	None:intergenic	35.0%
	ACAGAATGAGAAAGTGAGAA+TGG	-	chr2_2:16278880-16278899	Msa0240890:CDS	35.0%
!!	TAAGTGCTGAAAATCAGGTT+TGG	-	chr2_2:16279047-16279066	Msa0240890:intron	35.0%
	GTTAGGATGTGTAAGAATTG+TGG	-	chr2_2:16279262-16279281	Msa0240890:CDS	35.0%
	TAGGATGTGTAAGAATTGTG+GGG	-	chr2_2:16279264-16279283	Msa0240890:CDS	35.0%
!	TTGTGTTGTTACTACCTTGT+AGG	-	chr2_2:16279299-16279318	Msa0240890:exon	35.0%
!	AAGGCTTAGTATTTAGCCTT+TGG	+	chr2_2:16277276-16277295	None:intergenic	35.0%
	TTTGTGAGTAAATGGCTAGA+AGG	+	chr2_2:16277532-16277551	None:intergenic	35.0%
	AGTACCTGTTTGTGAGTAAA+TGG	+	chr2_2:16277540-16277559	None:intergenic	35.0%
!!!	AGTTTTAACTAAAACCACGG+TGG	+	chr2_2:16277673-16277692	None:intergenic	35.0%
	AGTGTTTGTGTTTGGATTCA+CGG	+	chr2_2:16277749-16277768	None:intergenic	35.0%
	TAGTCATTAGAATCCATCGA+CGG	-	chr2_2:16277769-16277788	Msa0240890:CDS	35.0%
!!	TCATGCATTGTTGTTTGAAG+AGG	+	chr2_2:16277987-16278006	None:intergenic	35.0%
	TCTGTTTGGATCACAAACAT+TGG	+	chr2_2:16278033-16278052	None:intergenic	35.0%
!!	CTTGAACGTTTTCTTTGAAG+AGG	+	chr2_2:16278083-16278102	None:intergenic	35.0%
!	ACTCTATTCTTTTGATGAGG+TGG	+	chr2_2:16278134-16278153	None:intergenic	35.0%
	ACAGAATGAGAAAGTGAGAA+TGG	-	chr2_2:16278880-16278899	Msa0240890:CDS	35.0%
!!	TAAGTGCTGAAAATCAGGTT+TGG	-	chr2_2:16279047-16279066	Msa0240890:intron	35.0%
	GTTAGGATGTGTAAGAATTG+TGG	-	chr2_2:16279262-16279281	Msa0240890:CDS	35.0%
	TAGGATGTGTAAGAATTGTG+GGG	-	chr2_2:16279264-16279283	Msa0240890:CDS	35.0%
!	TTGTGTTGTTACTACCTTGT+AGG	-	chr2_2:16279299-16279318	Msa0240890:exon	35.0%
!	AAGAGAGCATGCAATAGATG+TGG	+	chr2_2:16277342-16277361	None:intergenic	40.0%
!!	AGAGAGAGTTTGGTTTGGTT+TGG	+	chr2_2:16277420-16277439	None:intergenic	40.0%
	ATTGTGTGTGAGAGAGAGTT+TGG	+	chr2_2:16277430-16277449	None:intergenic	40.0%
	CTAGCCATTTACTCACAAAC+AGG	-	chr2_2:16277533-16277552	Msa0240890:CDS	40.0%
	TGAGTGCATGTTTGTATCCT+CGG	-	chr2_2:16277580-16277599	Msa0240890:CDS	40.0%
	TCGTTAGAAATATCCGTCGA+TGG	+	chr2_2:16277785-16277804	None:intergenic	40.0%
	TGCGATCAATATCAGATTGC+TGG	+	chr2_2:16278214-16278233	None:intergenic	40.0%
	GAAAGTGAGAATGGAGTTAG+AGG	-	chr2_2:16278889-16278908	Msa0240890:CDS	40.0%
	AATGAGGCAATCAAGGATGT+TGG	-	chr2_2:16278919-16278938	Msa0240890:intron	40.0%
	TGCTGAAAATCAGGTTTGGA+GGG	-	chr2_2:16279051-16279070	Msa0240890:intron	40.0%
	AGTTATGGCACATGTCAATG+AGG	-	chr2_2:16279129-16279148	Msa0240890:intron	40.0%
	GTTATGGCACATGTCAATGA+GGG	-	chr2_2:16279130-16279149	Msa0240890:intron	40.0%
	CAAAGACACAAATGCCTACA+AGG	+	chr2_2:16279316-16279335	None:intergenic	40.0%
	TTGTGTCTTTGCAATGTGTG+CGG	-	chr2_2:16279325-16279344	Msa0240890:five_prime_UTR	40.0%
!	AAGAGAGCATGCAATAGATG+TGG	+	chr2_2:16277342-16277361	None:intergenic	40.0%
!!	AGAGAGAGTTTGGTTTGGTT+TGG	+	chr2_2:16277420-16277439	None:intergenic	40.0%
	ATTGTGTGTGAGAGAGAGTT+TGG	+	chr2_2:16277430-16277449	None:intergenic	40.0%
	CTAGCCATTTACTCACAAAC+AGG	-	chr2_2:16277533-16277552	Msa0240890:CDS	40.0%
	TGAGTGCATGTTTGTATCCT+CGG	-	chr2_2:16277580-16277599	Msa0240890:CDS	40.0%
	TCGTTAGAAATATCCGTCGA+TGG	+	chr2_2:16277785-16277804	None:intergenic	40.0%
	TGCGATCAATATCAGATTGC+TGG	+	chr2_2:16278214-16278233	None:intergenic	40.0%
	GAAAGTGAGAATGGAGTTAG+AGG	-	chr2_2:16278889-16278908	Msa0240890:CDS	40.0%
	AATGAGGCAATCAAGGATGT+TGG	-	chr2_2:16278919-16278938	Msa0240890:intron	40.0%
	TGCTGAAAATCAGGTTTGGA+GGG	-	chr2_2:16279051-16279070	Msa0240890:intron	40.0%
	AGTTATGGCACATGTCAATG+AGG	-	chr2_2:16279129-16279148	Msa0240890:intron	40.0%
	GTTATGGCACATGTCAATGA+GGG	-	chr2_2:16279130-16279149	Msa0240890:intron	40.0%
	CAAAGACACAAATGCCTACA+AGG	+	chr2_2:16279316-16279335	None:intergenic	40.0%
	TTGTGTCTTTGCAATGTGTG+CGG	-	chr2_2:16279325-16279344	Msa0240890:five_prime_UTR	40.0%
	GATGTGGCTAAGTATTAGGG+AGG	+	chr2_2:16277326-16277345	None:intergenic	45.0%
	GTGTGAGAGAGAGTTTGGTT+TGG	+	chr2_2:16277425-16277444	None:intergenic	45.0%
	TGATTCTGACAAACTCACCG+AGG	+	chr2_2:16277600-16277619	None:intergenic	45.0%
	GATCCAAACAGAGCTGATAG+TGG	-	chr2_2:16278041-16278060	Msa0240890:intron	45.0%
	AGACCACTATCAGCTCTGTT+TGG	+	chr2_2:16278047-16278066	None:intergenic	45.0%
	GTGCTGAAAATCAGGTTTGG+AGG	-	chr2_2:16279050-16279069	Msa0240890:intron	45.0%
	ACTTGATTCAGCGTCATCCT+CGG	+	chr2_2:16279176-16279195	None:intergenic	45.0%
!	GATGACGCTGAATCAAGTTG+CGG	-	chr2_2:16279178-16279197	Msa0240890:intron	45.0%
!	ATGACGCTGAATCAAGTTGC+GGG	-	chr2_2:16279179-16279198	Msa0240890:intron	45.0%
!	GAATCAAGTTGCGGGAGTAA+TGG	-	chr2_2:16279187-16279206	Msa0240890:intron	45.0%
	TGTGTAAGAATTGTGGGGTG+AGG	-	chr2_2:16279269-16279288	Msa0240890:CDS	45.0%
	GTGTAAGAATTGTGGGGTGA+GGG	-	chr2_2:16279270-16279289	Msa0240890:CDS	45.0%
	TGTGTCTTTGCAATGTGTGC+GGG	-	chr2_2:16279326-16279345	Msa0240890:five_prime_UTR	45.0%
	CACTGGACATTTACGAACAG+TGG	+	chr2_2:16279353-16279372	None:intergenic	45.0%
	AAATGTCCAGTGTGTGACTC+TGG	-	chr2_2:16279361-16279380	Msa0240890:five_prime_UTR	45.0%
	GATGTGGCTAAGTATTAGGG+AGG	+	chr2_2:16277326-16277345	None:intergenic	45.0%
	GTGTGAGAGAGAGTTTGGTT+TGG	+	chr2_2:16277425-16277444	None:intergenic	45.0%
	TGATTCTGACAAACTCACCG+AGG	+	chr2_2:16277600-16277619	None:intergenic	45.0%
	GATCCAAACAGAGCTGATAG+TGG	-	chr2_2:16278041-16278060	Msa0240890:intron	45.0%
	AGACCACTATCAGCTCTGTT+TGG	+	chr2_2:16278047-16278066	None:intergenic	45.0%
	GTGCTGAAAATCAGGTTTGG+AGG	-	chr2_2:16279050-16279069	Msa0240890:intron	45.0%
	ACTTGATTCAGCGTCATCCT+CGG	+	chr2_2:16279176-16279195	None:intergenic	45.0%
!	GATGACGCTGAATCAAGTTG+CGG	-	chr2_2:16279178-16279197	Msa0240890:intron	45.0%
!	ATGACGCTGAATCAAGTTGC+GGG	-	chr2_2:16279179-16279198	Msa0240890:intron	45.0%
!	GAATCAAGTTGCGGGAGTAA+TGG	-	chr2_2:16279187-16279206	Msa0240890:intron	45.0%
	TGTGTAAGAATTGTGGGGTG+AGG	-	chr2_2:16279269-16279288	Msa0240890:CDS	45.0%
	GTGTAAGAATTGTGGGGTGA+GGG	-	chr2_2:16279270-16279289	Msa0240890:CDS	45.0%
	TGTGTCTTTGCAATGTGTGC+GGG	-	chr2_2:16279326-16279345	Msa0240890:five_prime_UTR	45.0%
	CACTGGACATTTACGAACAG+TGG	+	chr2_2:16279353-16279372	None:intergenic	45.0%
	AAATGTCCAGTGTGTGACTC+TGG	-	chr2_2:16279361-16279380	Msa0240890:five_prime_UTR	45.0%
!!	TTTAAAAAGAAATAAAAAAA+CGG	+	chr2_2:16278484-16278503	None:intergenic	5.0%
!!!	TTTTATTTCTTTTTAAATTA+TGG	-	chr2_2:16278487-16278506	Msa0240890:intron	5.0%
!!	AAATAAATAAATTATATTTG+GGG	-	chr2_2:16278621-16278640	Msa0240890:CDS	5.0%
!!	TTTAAAAAGAAATAAAAAAA+CGG	+	chr2_2:16278484-16278503	None:intergenic	5.0%
!!!	TTTTATTTCTTTTTAAATTA+TGG	-	chr2_2:16278487-16278506	Msa0240890:intron	5.0%
!!	AAATAAATAAATTATATTTG+GGG	-	chr2_2:16278621-16278640	Msa0240890:CDS	5.0%
	TCATGATGAACCCACCGTGT+CGG	-	chr2_2:16277617-16277636	Msa0240890:CDS	50.0%
	TTCTGACAAACCCACCGACA+CGG	+	chr2_2:16277634-16277653	None:intergenic	50.0%
	AGAATCACGATGAACCACCG+TGG	-	chr2_2:16277656-16277675	Msa0240890:CDS	50.0%
	AAGTTGCGGGAGTAATGGTC+CGG	-	chr2_2:16279192-16279211	Msa0240890:intron	50.0%
	AGTAATGGTCCGGCTGATGA+CGG	-	chr2_2:16279202-16279221	Msa0240890:intron	50.0%
	TCATGATGAACCCACCGTGT+CGG	-	chr2_2:16277617-16277636	Msa0240890:CDS	50.0%
	TTCTGACAAACCCACCGACA+CGG	+	chr2_2:16277634-16277653	None:intergenic	50.0%
	AGAATCACGATGAACCACCG+TGG	-	chr2_2:16277656-16277675	Msa0240890:CDS	50.0%
	AAGTTGCGGGAGTAATGGTC+CGG	-	chr2_2:16279192-16279211	Msa0240890:intron	50.0%
	AGTAATGGTCCGGCTGATGA+CGG	-	chr2_2:16279202-16279221	Msa0240890:intron	50.0%
	TGAGGGACATCATCATGCCG+CGG	-	chr2_2:16279147-16279166	Msa0240890:intron	55.0%
	GTGTCTTCACCGTCATCAGC+CGG	+	chr2_2:16279214-16279233	None:intergenic	55.0%
!!	TGATGACGGTGAAGACACCG+CGG	-	chr2_2:16279216-16279235	Msa0240890:intron	55.0%
!!	TCGGTGGTGGTGGTTTGGTT+AGG	-	chr2_2:16279245-16279264	Msa0240890:intron	55.0%
	TCCAGTGTGTGACTCTGGCA+TGG	-	chr2_2:16279366-16279385	Msa0240890:five_prime_UTR	55.0%
	TCCATGCCAGAGTCACACAC+TGG	+	chr2_2:16279370-16279389	None:intergenic	55.0%
	TGAGGGACATCATCATGCCG+CGG	-	chr2_2:16279147-16279166	Msa0240890:intron	55.0%
	GTGTCTTCACCGTCATCAGC+CGG	+	chr2_2:16279214-16279233	None:intergenic	55.0%
!!	TGATGACGGTGAAGACACCG+CGG	-	chr2_2:16279216-16279235	Msa0240890:intron	55.0%
!!	TCGGTGGTGGTGGTTTGGTT+AGG	-	chr2_2:16279245-16279264	Msa0240890:intron	55.0%
	TCCAGTGTGTGACTCTGGCA+TGG	-	chr2_2:16279366-16279385	Msa0240890:five_prime_UTR	55.0%
	TCCATGCCAGAGTCACACAC+TGG	+	chr2_2:16279370-16279389	None:intergenic	55.0%
	TGATGAACCCACCGTGTCGG+TGG	-	chr2_2:16277620-16277639	Msa0240890:CDS	60.0%
!	GATGAACCCACCGTGTCGGT+GGG	-	chr2_2:16277621-16277640	Msa0240890:CDS	60.0%
	GACAAACCCACCGACACGGT+GGG	+	chr2_2:16277630-16277649	None:intergenic	60.0%
	TGACAAACCCACCGACACGG+TGG	+	chr2_2:16277631-16277650	None:intergenic	60.0%
!!	GACTGTCGGTGGTGGTGGTT+TGG	-	chr2_2:16279240-16279259	Msa0240890:intron	60.0%
	TGATGAACCCACCGTGTCGG+TGG	-	chr2_2:16277620-16277639	Msa0240890:CDS	60.0%
!	GATGAACCCACCGTGTCGGT+GGG	-	chr2_2:16277621-16277640	Msa0240890:CDS	60.0%
	GACAAACCCACCGACACGGT+GGG	+	chr2_2:16277630-16277649	None:intergenic	60.0%
	TGACAAACCCACCGACACGG+TGG	+	chr2_2:16277631-16277650	None:intergenic	60.0%
!!	GACTGTCGGTGGTGGTGGTT+TGG	-	chr2_2:16279240-16279259	Msa0240890:intron	60.0%
	GGGACATCATCATGCCGCGG+TGG	-	chr2_2:16279150-16279169	Msa0240890:intron	65.0%
	GAAGACACCGCGGCGACTGT+CGG	-	chr2_2:16279226-16279245	Msa0240890:intron	65.0%
	GGGACATCATCATGCCGCGG+TGG	-	chr2_2:16279150-16279169	Msa0240890:intron	65.0%
	GAAGACACCGCGGCGACTGT+CGG	-	chr2_2:16279226-16279245	Msa0240890:intron	65.0%
	TCATCATGCCGCGGTGGCCG+AGG	-	chr2_2:16279156-16279175	Msa0240890:intron	70.0%
	AGCGTCATCCTCGGCCACCG+CGG	+	chr2_2:16279167-16279186	None:intergenic	70.0%
	ACCACCACCGACAGTCGCCG+CGG	+	chr2_2:16279236-16279255	None:intergenic	70.0%
	TCATCATGCCGCGGTGGCCG+AGG	-	chr2_2:16279156-16279175	Msa0240890:intron	70.0%
	AGCGTCATCCTCGGCCACCG+CGG	+	chr2_2:16279167-16279186	None:intergenic	70.0%
	ACCACCACCGACAGTCGCCG+CGG	+	chr2_2:16279236-16279255	None:intergenic	70.0%
	GACACCGCGGCGACTGTCGG+TGG	-	chr2_2:16279229-16279248	Msa0240890:intron	75.0%
	ACCGCGGCGACTGTCGGTGG+TGG	-	chr2_2:16279232-16279251	Msa0240890:intron	75.0%
!	GCGGCGACTGTCGGTGGTGG+TGG	-	chr2_2:16279235-16279254	Msa0240890:intron	75.0%
	GACACCGCGGCGACTGTCGG+TGG	-	chr2_2:16279229-16279248	Msa0240890:intron	75.0%
	ACCGCGGCGACTGTCGGTGG+TGG	-	chr2_2:16279232-16279251	Msa0240890:intron	75.0%
!	GCGGCGACTGTCGGTGGTGG+TGG	-	chr2_2:16279235-16279254	Msa0240890:intron	75.0%

Chromosome	Type	Strat	End	Strand	Name
chr2_2	gene	16277222	16279591	16277222	ID=Msa0240890;Name=Msa0240890
chr2_2	mRNA	16277222	16279591	16277222	ID=Msa0240890-mRNA-1;Parent=Msa0240890;Name=Msa0240890-mRNA-1;_AED=0.01;_eAED=0.01;_QI=274\|1\|1\|1\|1\|1\|3\|174\|316
chr2_2	exon	16277222	16277929	16277222	ID=Msa0240890-mRNA-1:exon:6664;Parent=Msa0240890-mRNA-1
chr2_2	exon	16278566	16278923	16278566	ID=Msa0240890-mRNA-1:exon:6663;Parent=Msa0240890-mRNA-1
chr2_2	exon	16279259	16279591	16279259	ID=Msa0240890-mRNA-1:exon:6662;Parent=Msa0240890-mRNA-1
chr2_2	five_prime_UTR	16279318	16279591	16279318	ID=Msa0240890-mRNA-1:five_prime_utr;Parent=Msa0240890-mRNA-1
chr2_2	CDS	16279259	16279317	16279259	ID=Msa0240890-mRNA-1:cds;Parent=Msa0240890-mRNA-1
chr2_2	CDS	16278566	16278923	16278566	ID=Msa0240890-mRNA-1:cds;Parent=Msa0240890-mRNA-1
chr2_2	CDS	16277396	16277929	16277396	ID=Msa0240890-mRNA-1:cds;Parent=Msa0240890-mRNA-1
chr2_2	three_prime_UTR	16277222	16277395	16277222	ID=Msa0240890-mRNA-1:three_prime_utr;Parent=Msa0240890-mRNA-1

Gene Sequence

>Msa0240890

ATGGCTGTTGATGCTAGTTACATGAATCTATTGCCTTCTAGCCATTTACTCACAAACAGGGAAATAATCAAATCTAATCAACATCATTATCAACAACAACAACAACAAATGTTGAACTCTGAATTATACAATGTTCAGATGGATTCTGCTGTGCCTCTTCAAACAACAATGCATGAATCTATGTTACCATTTTATCAATCCAATGTTTGTGATCCAAACAGAGCTGATAGTGGTCTTACTTGCAACAATCCTCTTCAAAGAAAACGTTCAAGAGATTTCTCAACTGAATTGGTTTCTCTACCACCTCATCAAAAGAATAGAGTAATCTCTTCTGAATCATCATCATCATTTGTTGATCAAGTTCTCTATCAATTTCAGAACCAGCAATCTGATATTGATCGCATCCTTGCTCATCATAATGAGAAAGTGAGAATGGAGTTAGAGGAACAAAAAATGAGGCAATCAAGGATGTTGGCATGCATGATTCAAGAGACAATAGCAAAGAAACTTAAAGAAAAAGATGAAGAGATTCAAAGAATAGGGAAGCTAAATTGGATGCTTCAAGAAAAAGTCAAAAGTTTAAGTGCTGAAAATCAGGTTTGGAGGGAGCTAGCACAAACAAATGAAACTACAGCCAATTATTTACGTAACAATTTGGAACAAGTTATGGCACATGTCAATGAGGGACATCATCATGCCGCGGTGGCCGAGGATGACGCTGAATCAAGTTGCGGGAGTAATGGTCCGGCTGATGACGGTGAAGACACCGCGGCGACTGTCGGTGGTGGTGGTTTGGTTAGGATGTGTAAGAATTGTGGGGTGAGGGAATCAGTTGTGTTGTTACTACCTTGTAGGCATTTGTGTCTTTGCAATGTGTGCGGGTCCACTGTTCGTAAATGTCCAGTGTGTGACTCTGGCATGGATGCTAGTGTGCATGTTAATCTCTCTTAG

Protein sequence

>Msa0240890

MAVDASYMNLLPSSHLLTNREIIKSNQHHYQQQQQQMLNSELYNVQMDSAVPLQTTMHESMLPFYQSNVCDPNRADSGLTCNNPLQRKRSRDFSTELVSLPPHQKNRVISSESSSSFVDQVLYQFQNQQSDIDRILAHHNEKVRMELEEQKMRQSRMLACMIQETIAKKLKEKDEEIQRIGKLNWMLQEKVKSLSAENQVWRELAQTNETTANYLRNNLEQVMAHVNEGHHHAAVAEDDAESSCGSNGPADDGEDTAATVGGGGLVRMCKNCGVRESVVLLLPCRHLCLCNVCGSTVRKCPVCDSGMDASVHVNLS*