Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0244110 | ACR54455.1 | 98.775 | 408 | 5 | 0 | 1 | 408 | 1 | 408 | 0.0 | 812 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0244110 | sp|Q9ZT63|MTP1_ARATH | 68.750 | 416 | 104 | 4 | 1 | 408 | 1 | 398 | 8.20e-179 | 506 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0244110 | C9WEK2 | 98.775 | 408 | 5 | 0 | 1 | 408 | 1 | 408 | 0.0 | 812 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0044000 | Msa0244110 | 0.802813 | 4.695367e-49 | -8.615850e-47 |
| Msa0046100 | Msa0244110 | 0.801522 | 8.653315e-49 | -8.615850e-47 |
| Msa0127800 | Msa0244110 | 0.811443 | 6.982813e-51 | -8.615850e-47 |
| Msa0201500 | Msa0244110 | 0.930244 | 2.172318e-93 | -8.615850e-47 |
| Msa0244110 | Msa0244160 | 0.996622 | 6.029163e-230 | -8.615850e-47 |
| Msa0244110 | Msa0615710 | 0.808673 | 2.758646e-50 | -8.615850e-47 |
| Msa0244110 | Msa0616160 | 0.803199 | 3.907700e-49 | -8.615850e-47 |
| Msa0244110 | Msa0728630 | 0.826394 | 2.779149e-54 | -8.615850e-47 |
| Msa0244110 | Msa0743720 | 0.800271 | 1.558535e-48 | -8.615850e-47 |
| Msa0244110 | Msa0807470 | 0.802358 | 5.825802e-49 | -8.615850e-47 |
| Msa0244110 | Msa0945110 | 0.804323 | 2.282468e-49 | -8.615850e-47 |
| Msa0244110 | Msa0969520 | 0.805865 | 1.085951e-49 | -8.615850e-47 |
| Msa0244110 | Msa1100050 | 0.801988 | 6.942839e-49 | -8.615850e-47 |
| Msa0244110 | Msa1135470 | 0.803876 | 2.827597e-49 | -8.615850e-47 |
| Msa0244110 | Msa1243640 | 0.850157 | 2.035439e-60 | -8.615850e-47 |
| Msa0244110 | Msa1452240 | 0.807153 | 5.807509e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0244110 | MtrunA17_Chr2g0297881 | 97.549 | 408 | 9 | 1 | 1 | 408 | 2 | 408 | 0.0 | 795 |
| Msa0244110 | MtrunA17_Chr8g0345881 | 77.206 | 408 | 70 | 4 | 1 | 408 | 2 | 386 | 0.0 | 556 |
| Msa0244110 | MtrunA17_Chr4g0032191 | 47.368 | 380 | 175 | 4 | 31 | 407 | 37 | 394 | 3.48e-100 | 303 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0244110 | AT2G46800.5 | 68.750 | 416 | 104 | 4 | 1 | 408 | 1 | 398 | 8.33e-180 | 506 |
| Msa0244110 | AT2G46800.1 | 68.750 | 416 | 104 | 4 | 1 | 408 | 1 | 398 | 8.33e-180 | 506 |
| Msa0244110 | AT2G46800.3 | 68.750 | 416 | 104 | 4 | 1 | 408 | 1 | 398 | 8.33e-180 | 506 |
| Msa0244110 | AT2G46800.4 | 68.750 | 416 | 104 | 4 | 1 | 408 | 1 | 398 | 8.33e-180 | 506 |
| Msa0244110 | AT2G46800.2 | 68.750 | 416 | 104 | 4 | 1 | 408 | 1 | 398 | 8.33e-180 | 506 |
| Msa0244110 | AT3G58810.1 | 66.835 | 395 | 93 | 4 | 15 | 408 | 74 | 431 | 6.16e-168 | 478 |
| Msa0244110 | AT3G58810.2 | 66.835 | 395 | 93 | 4 | 15 | 408 | 35 | 392 | 7.44e-168 | 476 |
| Msa0244110 | AT3G61940.1 | 71.341 | 164 | 42 | 1 | 245 | 408 | 176 | 334 | 3.24e-74 | 235 |
| Msa0244110 | AT3G61940.1 | 67.320 | 153 | 46 | 2 | 24 | 175 | 7 | 156 | 4.40e-65 | 211 |
| Msa0244110 | AT2G29410.1 | 50.000 | 146 | 73 | 0 | 31 | 176 | 36 | 181 | 4.81e-43 | 155 |
| Msa0244110 | AT2G04620.1 | 28.608 | 395 | 227 | 10 | 33 | 383 | 386 | 769 | 5.53e-33 | 131 |
| Msa0244110 | AT2G04620.2 | 29.134 | 381 | 229 | 9 | 33 | 381 | 218 | 589 | 8.55e-31 | 124 |
| Msa0244110 | AT1G33020.1 | 62.069 | 58 | 18 | 1 | 351 | 408 | 491 | 544 | 7.73e-14 | 73.6 |
Find 114 sgRNAs with CRISPR-Local
Find 237 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGAGTTAGAAGCAGAATT+TGG | 0.211598 | 2_2:+22245119 | Msa0244110:five_prime_UTR |
| ATCATTATGGCTTTGGTATT+GGG | 0.244966 | 2_2:+22247862 | Msa0244110:CDS |
| TGGTTTCTATGCAATTAATA+TGG | 0.258906 | 2_2:+22247728 | Msa0244110:CDS |
| TCCAGCCCATATAGAAAATA+AGG | 0.287725 | 2_2:-22247644 | None:intergenic |
| TATGTTCCGTTTCTTCTTCT+CGG | 0.293379 | 2_2:-22248136 | None:intergenic |
| CATCATTATGGCTTTGGTAT+TGG | 0.295955 | 2_2:+22247861 | Msa0244110:CDS |
| TGAGGTAGTTGGTGGTATTA+AGG | 0.314580 | 2_2:+22247555 | Msa0244110:CDS |
| GATGAATTTAGTTTAGACTA+TGG | 0.318204 | 2_2:+22248628 | Msa0244110:three_prime_UTR |
| CAACATGCTGAGAAACATTC+TGG | 0.322869 | 2_2:+22248314 | Msa0244110:CDS |
| GAGGTTACTGAACCACTTCT+TGG | 0.325560 | 2_2:+22248096 | Msa0244110:CDS |
| CAATTAATATGGCTGCTTGC+TGG | 0.329178 | 2_2:+22247739 | Msa0244110:CDS |
| CCGAATCCTCGTCAGTCATT+TGG | 0.330373 | 2_2:+22247676 | Msa0244110:CDS |
| TTTCGTACTCCTTTGTTTGT+TGG | 0.332457 | 2_2:-22245166 | None:intergenic |
| CTGTTCATGAGCTGCACATA+TGG | 0.341164 | 2_2:+22248418 | Msa0244110:CDS |
| TCAGATTCAAAAGGGGCTAT+TGG | 0.341343 | 2_2:+22248377 | Msa0244110:CDS |
| TCTTGTGGTGAACATCATTA+TGG | 0.376777 | 2_2:+22247849 | Msa0244110:CDS |
| AATAGAGATTCTTGGTGCTT+TGG | 0.384622 | 2_2:+22247708 | Msa0244110:CDS |
| CAGAGTATTGGTGTAATGAT+TGG | 0.384953 | 2_2:+22248201 | Msa0244110:CDS |
| AGAGTATTGGTGTAATGATT+GGG | 0.403737 | 2_2:+22248202 | Msa0244110:CDS |
| AAACATTCTGGAAGTCTTGA+TGG | 0.415617 | 2_2:+22248326 | Msa0244110:CDS |
| ATGTTTGTAGTTGCTGCATT+TGG | 0.417750 | 2_2:+22247826 | Msa0244110:CDS |
| GGTGAACATCATTATGGCTT+TGG | 0.430114 | 2_2:+22247855 | Msa0244110:CDS |
| AATTAATATGGCTGCTTGCT+GGG | 0.433529 | 2_2:+22247740 | Msa0244110:CDS |
| CCAAATGACTGACGAGGATT+CGG | 0.433628 | 2_2:-22247676 | None:intergenic |
| GCCATTGCTAGACTCATTGC+AGG | 0.434083 | 2_2:+22247778 | Msa0244110:CDS |
| CAGTAACCTCTTTGTGGTCA+TGG | 0.441794 | 2_2:-22248083 | None:intergenic |
| ATGTTCCGTTTCTTCTTCTC+GGG | 0.446423 | 2_2:-22248135 | None:intergenic |
| TTCATGTCCGTTGAGGTAGT+TGG | 0.447396 | 2_2:+22247544 | Msa0244110:CDS |
| TTTCTATATGGGCTGGAGGA+TGG | 0.450599 | 2_2:+22247650 | Msa0244110:CDS |
| TTCTATATGGGCTGGAGGAT+GGG | 0.456683 | 2_2:+22247651 | Msa0244110:CDS |
| CTGGGATATTATTGCGAACA+TGG | 0.461386 | 2_2:+22248756 | Msa0244110:three_prime_UTR |
| CATGGCCATGGCCGTGATCA+TGG | 0.461736 | 2_2:-22247885 | None:intergenic |
| GGTGCGCATCATCATGAGTA+TGG | 0.464413 | 2_2:-22248053 | None:intergenic |
| ATCACATCAGCGTCTGCTTC+AGG | 0.464844 | 2_2:-22248489 | None:intergenic |
| TTTGGGGTTTATTCGGAGTG+TGG | 0.467772 | 2_2:-22245074 | None:intergenic |
| TTGGGGTTTATTCGGAGTGT+GGG | 0.469683 | 2_2:-22245073 | None:intergenic |
| GGGGCATATCTCCACGTACT+TGG | 0.471011 | 2_2:+22248168 | Msa0244110:CDS |
| AGATGCTACTCAGATTCAAA+AGG | 0.472347 | 2_2:+22248368 | Msa0244110:CDS |
| CCATGTGAGTTCTCAGACGC+AGG | 0.479486 | 2_2:+22247445 | Msa0244110:CDS |
| GCCGACCCGAGAAGAAGAAA+CGG | 0.483223 | 2_2:+22248130 | Msa0244110:CDS |
| AAGCACCAAGAATCTCTATT+CGG | 0.486057 | 2_2:-22247705 | None:intergenic |
| CCACTTCTTGGTGAATCAAA+AGG | 0.490972 | 2_2:+22248108 | Msa0244110:CDS |
| TCATATGGTATAAACCTGAA+TGG | 0.495450 | 2_2:+22248232 | Msa0244110:CDS |
| CACATATGGGCCATTACAGT+GGG | 0.495527 | 2_2:+22248432 | Msa0244110:CDS |
| CAATACCTTCCCCACTGTAA+TGG | 0.500293 | 2_2:-22248442 | None:intergenic |
| ATGTCCGTTGAGGTAGTTGG+TGG | 0.504771 | 2_2:+22247547 | Msa0244110:CDS |
| AGCAGACGCTGATGTGATGC+TGG | 0.509043 | 2_2:+22248494 | Msa0244110:CDS |
| GATGCTACTCAGATTCAAAA+GGG | 0.519531 | 2_2:+22248369 | Msa0244110:CDS |
| CATGATCACGGCCATGGCCA+TGG | 0.520047 | 2_2:+22247886 | Msa0244110:CDS |
| ACAAGGTCGTAGACTACATC+AGG | 0.528566 | 2_2:+22248517 | Msa0244110:CDS |
| TCTCAGCATGTTGATAGTTG+TGG | 0.528970 | 2_2:-22248304 | None:intergenic |
| TCAAAAGGGGCTATTGGAGA+TGG | 0.528979 | 2_2:+22248383 | Msa0244110:CDS |
| ATGATGCTCATCTGTATGCT+TGG | 0.529964 | 2_2:-22247968 | None:intergenic |
| TGATTTCAATTATTTGCCCA+TGG | 0.531617 | 2_2:-22247378 | None:intergenic |
| TTGGTATTGGGCCATGATCA+CGG | 0.532393 | 2_2:+22247874 | Msa0244110:CDS |
| TTGGGCCATGATCACGGCCA+TGG | 0.533606 | 2_2:+22247880 | Msa0244110:CDS |
| CTTTGTGGTCATGGTCATGA+TGG | 0.535439 | 2_2:-22248074 | None:intergenic |
| AGTTGCTGCATTTGGTCTTG+TGG | 0.544560 | 2_2:+22247834 | Msa0244110:CDS |
| CGTGATCATGTCCATGGCCA+TGG | 0.547666 | 2_2:-22247897 | None:intergenic |
| CAATCATTACACCAATACTC+TGG | 0.548068 | 2_2:-22248200 | None:intergenic |
| TCCGTTTCTTCTTCTCGGGT+CGG | 0.548332 | 2_2:-22248131 | None:intergenic |
| ATGTAGGAAGGAAAATTTGT+GGG | 0.548918 | 2_2:+22247416 | Msa0244110:CDS |
| GGACATGAAAATAACGCAAA+GGG | 0.552650 | 2_2:-22247530 | None:intergenic |
| GCAGGTCCTCAAGAAGTGGA+TGG | 0.553959 | 2_2:+22247796 | Msa0244110:CDS |
| CAGGTCCTCAAGAAGTGGAT+GGG | 0.559249 | 2_2:+22247797 | Msa0244110:CDS |
| GTGGTTCAGTAACCTCTTTG+TGG | 0.561769 | 2_2:-22248089 | None:intergenic |
| AGTGGAGAACTCCCTGATGT+AGG | 0.568018 | 2_2:+22247400 | Msa0244110:CDS |
| AAACGGAACATAAATGTACA+TGG | 0.573750 | 2_2:+22248147 | Msa0244110:CDS |
| TGTTCATGAGCTGCACATAT+GGG | 0.573784 | 2_2:+22248419 | Msa0244110:CDS |
| CATTGCAGGTCCTCAAGAAG+TGG | 0.575236 | 2_2:+22247792 | Msa0244110:CDS |
| GGAGACTCTATCCAGAGTAT+TGG | 0.578371 | 2_2:+22248189 | Msa0244110:CDS |
| CATGGCCATGGACATGATCA+CGG | 0.583188 | 2_2:+22247898 | Msa0244110:CDS |
| CATGGACATGATCACGGCCA+CGG | 0.584750 | 2_2:+22247904 | Msa0244110:CDS |
| TGGGATATTATTGCGAACAT+GGG | 0.590170 | 2_2:+22248757 | Msa0244110:three_prime_UTR |
| ATGGGCCATTACAGTGGGGA+AGG | 0.591116 | 2_2:+22248437 | Msa0244110:CDS |
| GAGTATTGGTGTAATGATTG+GGG | 0.591360 | 2_2:+22248203 | Msa0244110:CDS |
| GGGCAAATAATTGAAATCAG+TGG | 0.595396 | 2_2:+22247382 | Msa0244110:CDS |
| CCATATAGAAAATAAGGAGA+TGG | 0.595760 | 2_2:-22247638 | None:intergenic |
| AAGAAACAACCAACAAACAA+AGG | 0.596231 | 2_2:+22245157 | Msa0244110:five_prime_UTR |
| CGCTGATGTGATGCTGGACA+AGG | 0.600547 | 2_2:+22248500 | Msa0244110:CDS |
| ACCTGCAATGAGTCTAGCAA+TGG | 0.601692 | 2_2:-22247779 | None:intergenic |
| ATTGGAGATGGAAGAAGTAG+TGG | 0.601966 | 2_2:+22248395 | Msa0244110:CDS |
| AAACTGAAATACCATGGCTG+TGG | 0.606255 | 2_2:-22247942 | None:intergenic |
| CGTGGCCGTGATCATGTCCA+TGG | 0.606876 | 2_2:-22247903 | None:intergenic |
| GAGAACTCCCTGATGTAGGA+AGG | 0.609906 | 2_2:+22247404 | Msa0244110:CDS |
| AAGCACAAAGTGGTCACCAT+GGG | 0.612715 | 2_2:+22247362 | Msa0244110:CDS |
| GATGTAGGAAGGAAAATTTG+TGG | 0.619238 | 2_2:+22247415 | Msa0244110:CDS |
| AACGGAACATAAATGTACAT+GGG | 0.622867 | 2_2:+22248148 | Msa0244110:CDS |
| GGCCACGGACATGATCATCA+TGG | 0.626939 | 2_2:+22247919 | Msa0244110:CDS |
| TTTCGAAGGATTCTGAAGAA+CGG | 0.630672 | 2_2:+22247473 | Msa0244110:CDS |
| CCTGCGTCTGAGAACTCACA+TGG | 0.630931 | 2_2:-22247445 | None:intergenic |
| GCACATATGGGCCATTACAG+TGG | 0.634593 | 2_2:+22248431 | Msa0244110:CDS |
| CGGACATGAAAATAACGCAA+AGG | 0.635615 | 2_2:-22247531 | None:intergenic |
| AATACCACCAACTACCTCAA+CGG | 0.636394 | 2_2:-22247551 | None:intergenic |
| GAAGCACAAAGTGGTCACCA+TGG | 0.639833 | 2_2:+22247361 | Msa0244110:CDS |
| AGACGCAGGATCTATTTCGA+AGG | 0.643242 | 2_2:+22247459 | Msa0244110:CDS |
| GCGAAAGCTTCTGATAGCAG+TGG | 0.645701 | 2_2:+22247507 | Msa0244110:CDS |
| GGGATATTATTGCGAACATG+GGG | 0.648396 | 2_2:+22248758 | Msa0244110:three_prime_UTR |
| TCATGACCATGACCACAAAG+AGG | 0.650002 | 2_2:+22248077 | Msa0244110:CDS |
| GATCATCATGGCCACAGCCA+TGG | 0.655433 | 2_2:+22247931 | Msa0244110:CDS |
| TGAGTAGCATCTATCTCGCG+TGG | 0.657042 | 2_2:-22248357 | None:intergenic |
| GGATAGAGTCTCCAAGTACG+TGG | 0.658730 | 2_2:-22248179 | None:intergenic |
| AGGTCGTAGACTACATCAGG+AGG | 0.671694 | 2_2:+22248520 | Msa0244110:CDS |
| ATGCTACTCAGATTCAAAAG+GGG | 0.673395 | 2_2:+22248370 | Msa0244110:CDS |
| ACGGAACATAAATGTACATG+GGG | 0.674674 | 2_2:+22248149 | Msa0244110:CDS |
| TTGCAGATGGAAGCACAAAG+TGG | 0.690821 | 2_2:+22247352 | Msa0244110:intron |
| TGTAGGAAGGAAAATTTGTG+GGG | 0.696003 | 2_2:+22247417 | Msa0244110:CDS |
| GATGAGCATCATCACACACA+TGG | 0.698036 | 2_2:+22247979 | Msa0244110:CDS |
| AGTATTGGTGTAATGATTGG+GGG | 0.700635 | 2_2:+22248204 | Msa0244110:CDS |
| TGGTAGAAACTGAAATACCA+TGG | 0.701092 | 2_2:-22247948 | None:intergenic |
| GGCCATGATGATCATGTCCG+TGG | 0.701854 | 2_2:-22247921 | None:intergenic |
| GCGCATCATCATGAGTATGG+TGG | 0.706117 | 2_2:-22248050 | None:intergenic |
| GGTCGTAGACTACATCAGGA+GGG | 0.723067 | 2_2:+22248521 | Msa0244110:CDS |
| ACATATGGGCCATTACAGTG+GGG | 0.768745 | 2_2:+22248433 | Msa0244110:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTATTAATTCTTTTTTG+TGG | + | chr2_2:22245319-22245338 | Msa0244110:intron | 10.0% |
| !!! | TATATTGTTGTTTTTGTTTT+GGG | - | chr2_2:22245094-22245113 | None:intergenic | 15.0% |
| !!! | TTATATTGTTGTTTTTGTTT+TGG | - | chr2_2:22245095-22245114 | None:intergenic | 15.0% |
| !! | CAAAATAATAATAGAATAGA+AGG | - | chr2_2:22245473-22245492 | None:intergenic | 15.0% |
| !!! | AAATGATATATTATTTTCCA+TGG | - | chr2_2:22246160-22246179 | None:intergenic | 15.0% |
| !! | ATGGAAAATAATATATCATT+TGG | + | chr2_2:22246159-22246178 | Msa0244110:intron | 15.0% |
| !! | TATTTCAGTATAATTGTATA+AGG | + | chr2_2:22246312-22246331 | Msa0244110:intron | 15.0% |
| !!! | TTTGGTAATTTAAGATAATT+AGG | + | chr2_2:22246697-22246716 | Msa0244110:intron | 15.0% |
| !!! | TTGGTAATTTAAGATAATTA+GGG | + | chr2_2:22246698-22246717 | Msa0244110:intron | 15.0% |
| !!! | TAATTTTATTACAGACAATT+AGG | - | chr2_2:22246951-22246970 | None:intergenic | 15.0% |
| !!! | AAATGTTTTATAAAAACTAC+TGG | + | chr2_2:22247142-22247161 | Msa0244110:intron | 15.0% |
| !!! | ATATTGTTGTTTTTGTTTTG+GGG | - | chr2_2:22245093-22245112 | None:intergenic | 20.0% |
| !!! | ACAAATTTATGTGAGATTTT+AGG | + | chr2_2:22245502-22245521 | Msa0244110:intron | 20.0% |
| !! | CTTTCTTTGTATTAAAATTC+CGG | + | chr2_2:22245670-22245689 | Msa0244110:intron | 20.0% |
| !! | TTTCTTTGTATTAAAATTCC+GGG | + | chr2_2:22245671-22245690 | Msa0244110:intron | 20.0% |
| !! | AGTTAGCAATTTCATTTATA+TGG | + | chr2_2:22245719-22245738 | Msa0244110:intron | 20.0% |
| !!! | AATTCTTTTGGATTATGAAA+AGG | - | chr2_2:22246189-22246208 | None:intergenic | 20.0% |
| !! | ATATATAAATAATCGAAGAG+AGG | + | chr2_2:22246667-22246686 | Msa0244110:intron | 20.0% |
| !! | TAAGAGACTTAATTAGTTAA+TGG | - | chr2_2:22246858-22246877 | None:intergenic | 20.0% |
| !! | ATTGTTCTATAATAATCAAG+AGG | + | chr2_2:22246919-22246938 | Msa0244110:intron | 20.0% |
| !!! | TTTCTGATTTGATAATTTGT+TGG | + | chr2_2:22247100-22247119 | Msa0244110:intron | 20.0% |
| !!! | TTCCTGTTTCTTTTTATTTA+TGG | + | chr2_2:22247227-22247246 | Msa0244110:intron | 20.0% |
| !! | TTTCATTAATATATTGCAGA+TGG | + | chr2_2:22247339-22247358 | Msa0244110:intron | 20.0% |
| !! | AAATCATCACTAAACAAAAA+AGG | - | chr2_2:22248603-22248622 | None:intergenic | 20.0% |
| !!! | TTTTTGTTTTGGGGTTTATT+CGG | - | chr2_2:22245084-22245103 | None:intergenic | 25.0% |
| ! | AAAGAGATAAGATTAAGGAA+CGG | - | chr2_2:22245240-22245259 | None:intergenic | 25.0% |
| ! | GTAAGAAAGAGATAAGATTA+AGG | - | chr2_2:22245245-22245264 | None:intergenic | 25.0% |
| ! | ATAATAGAATAGAAGGTTCT+AGG | - | chr2_2:22245466-22245485 | None:intergenic | 25.0% |
| !!! | AGAAACCTGAATATTGATTT+TGG | + | chr2_2:22245842-22245861 | Msa0244110:intron | 25.0% |
| !!! | GAAACCTGAATATTGATTTT+GGG | + | chr2_2:22245843-22245862 | Msa0244110:intron | 25.0% |
| !! | AATCCAAAAGAATTTTCAGA+AGG | + | chr2_2:22246195-22246214 | Msa0244110:intron | 25.0% |
| !!! | TTGATTGACTTAGTCTTTTA+AGG | + | chr2_2:22246392-22246411 | Msa0244110:intron | 25.0% |
| ! | TGTGAATAATGCATTGAAAA+AGG | + | chr2_2:22246497-22246516 | Msa0244110:intron | 25.0% |
| ! | TAATGCATTGAAAAAGGAAA+AGG | + | chr2_2:22246503-22246522 | Msa0244110:intron | 25.0% |
| ! | TTGCTTTGATTATAGAACAA+AGG | + | chr2_2:22246769-22246788 | Msa0244110:intron | 25.0% |
| ! | TGCTTTGATTATAGAACAAA+GGG | + | chr2_2:22246770-22246789 | Msa0244110:intron | 25.0% |
| !! | TGTTTTATAAAAACTACTGG+TGG | + | chr2_2:22247145-22247164 | Msa0244110:intron | 25.0% |
| ! | TTAGATGTTGAATTGGATAA+TGG | + | chr2_2:22247170-22247189 | Msa0244110:intron | 25.0% |
| ! | AGCCATAAATAAAAAGAAAC+AGG | - | chr2_2:22247232-22247251 | None:intergenic | 25.0% |
| ! | AACTGTACAATTCTGTTTAA+TGG | + | chr2_2:22247288-22247307 | Msa0244110:intron | 25.0% |
| !!! | CATCTCCTTATTTTCTATAT+GGG | + | chr2_2:22247639-22247658 | Msa0244110:CDS | 25.0% |
| ! | TGGTTTCTATGCAATTAATA+TGG | + | chr2_2:22247728-22247747 | Msa0244110:CDS | 25.0% |
| !! | AATCTTTTCTGTAATTGTCT+TGG | + | chr2_2:22248281-22248300 | Msa0244110:CDS | 25.0% |
| !! | GATGAATTTAGTTTAGACTA+TGG | + | chr2_2:22248628-22248647 | Msa0244110:three_prime_UTR | 25.0% |
| ! | ATATCCCAGACATAAAAATT+TGG | - | chr2_2:22248745-22248764 | None:intergenic | 25.0% |
| AAAGAGTTAGAAGCAGAATT+TGG | + | chr2_2:22245119-22245138 | Msa0244110:five_prime_UTR | 30.0% | |
| AAGAAACAACCAACAAACAA+AGG | + | chr2_2:22245157-22245176 | Msa0244110:five_prime_UTR | 30.0% | |
| !! | GATTTTAGGTCGATAATCAT+TGG | + | chr2_2:22245516-22245535 | Msa0244110:intron | 30.0% |
| !!! | ATATTGATTTTGGGCTTGTT+TGG | + | chr2_2:22245852-22245871 | Msa0244110:intron | 30.0% |
| ATAAGTTTGTGAGACTGTTT+GGG | + | chr2_2:22245903-22245922 | Msa0244110:intron | 30.0% | |
| AATAAGCTGTTTATCCAAAC+AGG | + | chr2_2:22246134-22246153 | Msa0244110:intron | 30.0% | |
| !! | ACTCCTTCTGAAAATTCTTT+TGG | - | chr2_2:22246201-22246220 | None:intergenic | 30.0% |
| ! | AATTTTCAGAAGGAGTCATT+AGG | + | chr2_2:22246205-22246224 | Msa0244110:intron | 30.0% |
| ATGCATTATTCACAAAAGCA+TGG | - | chr2_2:22246491-22246510 | None:intergenic | 30.0% | |
| CAGTACAAATGAGTCTTTAT+TGG | + | chr2_2:22246590-22246609 | Msa0244110:intron | 30.0% | |
| ! | TTAAGATAATTAGGGCCTTT+TGG | + | chr2_2:22246706-22246725 | Msa0244110:intron | 30.0% |
| ! | ACAATAATCCAAAGCTTTGA+GGG | - | chr2_2:22246904-22246923 | None:intergenic | 30.0% |
| AACAATAATCCAAAGCTTTG+AGG | - | chr2_2:22246905-22246924 | None:intergenic | 30.0% | |
| ! | AAACATTTAGACCTCTGAAA+TGG | - | chr2_2:22247130-22247149 | None:intergenic | 30.0% |
| ! | TTTTGCTTCCATTTAATGCT+TGG | + | chr2_2:22247265-22247284 | Msa0244110:intron | 30.0% |
| TGATTTCAATTATTTGCCCA+TGG | - | chr2_2:22247381-22247400 | None:intergenic | 30.0% | |
| ! | AAATTTTCCTTCCTACATCA+GGG | - | chr2_2:22247414-22247433 | None:intergenic | 30.0% |
| ATGTAGGAAGGAAAATTTGT+GGG | + | chr2_2:22247416-22247435 | Msa0244110:CDS | 30.0% | |
| CCATATAGAAAATAAGGAGA+TGG | - | chr2_2:22247641-22247660 | None:intergenic | 30.0% | |
| !!! | CCATCTCCTTATTTTCTATA+TGG | + | chr2_2:22247638-22247657 | Msa0244110:CDS | 30.0% |
| ! | TTTTTCCGAATAGAGATTCT+TGG | + | chr2_2:22247700-22247719 | Msa0244110:CDS | 30.0% |
| !! | ATCATTATGGCTTTGGTATT+GGG | + | chr2_2:22247862-22247881 | Msa0244110:CDS | 30.0% |
| ! | AATGCTTTTCATCATCATGA+TGG | - | chr2_2:22248017-22248036 | None:intergenic | 30.0% |
| AAACGGAACATAAATGTACA+TGG | + | chr2_2:22248147-22248166 | Msa0244110:CDS | 30.0% | |
| AACGGAACATAAATGTACAT+GGG | + | chr2_2:22248148-22248167 | Msa0244110:CDS | 30.0% | |
| !! | AGAGTATTGGTGTAATGATT+GGG | + | chr2_2:22248202-22248221 | Msa0244110:CDS | 30.0% |
| TCATATGGTATAAACCTGAA+TGG | + | chr2_2:22248232-22248251 | Msa0244110:CDS | 30.0% | |
| ! | AAATCGACTATTTTCCATTC+AGG | - | chr2_2:22248249-22248268 | None:intergenic | 30.0% |
| ! | TCATGCCAAATTTTTATGTC+TGG | + | chr2_2:22248737-22248756 | Msa0244110:three_prime_UTR | 30.0% |
| ! | CATGCCAAATTTTTATGTCT+GGG | + | chr2_2:22248738-22248757 | Msa0244110:three_prime_UTR | 30.0% |
| ! | TTTCGTACTCCTTTGTTTGT+TGG | - | chr2_2:22245169-22245188 | None:intergenic | 35.0% |
| CAAGCCCAAAATCAATATTC+AGG | - | chr2_2:22245850-22245869 | None:intergenic | 35.0% | |
| CATAAGTTTGTGAGACTGTT+TGG | + | chr2_2:22245902-22245921 | Msa0244110:intron | 35.0% | |
| ! | ATTATTTTCCATGGCCTGTT+TGG | - | chr2_2:22246151-22246170 | None:intergenic | 35.0% |
| ! | TCAATGAAGTTTTCGCTACT+AGG | + | chr2_2:22246259-22246278 | Msa0244110:intron | 35.0% |
| GTATAATTGTATAAGGACGC+TGG | + | chr2_2:22246319-22246338 | Msa0244110:intron | 35.0% | |
| AATCAAAGCAGAGCAAATAG+AGG | - | chr2_2:22246378-22246397 | None:intergenic | 35.0% | |
| CATAAATCGTACAAGCCAAT+TGG | - | chr2_2:22246626-22246645 | None:intergenic | 35.0% | |
| ATTATGTAGTAACCCTCTGA+GGG | - | chr2_2:22247034-22247053 | None:intergenic | 35.0% | |
| TATTATGTAGTAACCCTCTG+AGG | - | chr2_2:22247035-22247054 | None:intergenic | 35.0% | |
| AAGCTATTACGTAGTTGAAC+CGG | + | chr2_2:22247055-22247074 | Msa0244110:intron | 35.0% | |
| TCTAGTTGCAATTTCATTCC+CGG | - | chr2_2:22247077-22247096 | None:intergenic | 35.0% | |
| AAAAGAAACAGGAAGTTCTG+AGG | - | chr2_2:22247221-22247240 | None:intergenic | 35.0% | |
| GTACAGTTCCAAGCATTAAA+TGG | - | chr2_2:22247276-22247295 | None:intergenic | 35.0% | |
| GGGCAAATAATTGAAATCAG+TGG | + | chr2_2:22247382-22247401 | Msa0244110:CDS | 35.0% | |
| ! | CAAATTTTCCTTCCTACATC+AGG | - | chr2_2:22247415-22247434 | None:intergenic | 35.0% |
| GATGTAGGAAGGAAAATTTG+TGG | + | chr2_2:22247415-22247434 | Msa0244110:CDS | 35.0% | |
| TGTAGGAAGGAAAATTTGTG+GGG | + | chr2_2:22247417-22247436 | Msa0244110:CDS | 35.0% | |
| ! | TTTCGAAGGATTCTGAAGAA+CGG | + | chr2_2:22247473-22247492 | Msa0244110:CDS | 35.0% |
| GGACATGAAAATAACGCAAA+GGG | - | chr2_2:22247533-22247552 | None:intergenic | 35.0% | |
| !!! | TCCTTATTTTCTATATGGGC+TGG | + | chr2_2:22247643-22247662 | Msa0244110:CDS | 35.0% |
| TCCAGCCCATATAGAAAATA+AGG | - | chr2_2:22247647-22247666 | None:intergenic | 35.0% | |
| !!! | TTATTTTCTATATGGGCTGG+AGG | + | chr2_2:22247646-22247665 | Msa0244110:CDS | 35.0% |
| AAAAATCCAAATGACTGACG+AGG | - | chr2_2:22247685-22247704 | None:intergenic | 35.0% | |
| AAGCACCAAGAATCTCTATT+CGG | - | chr2_2:22247708-22247727 | None:intergenic | 35.0% | |
| !! | AATAGAGATTCTTGGTGCTT+TGG | + | chr2_2:22247708-22247727 | Msa0244110:CDS | 35.0% |
| AATTAATATGGCTGCTTGCT+GGG | + | chr2_2:22247740-22247759 | Msa0244110:CDS | 35.0% | |
| ATGTTTGTAGTTGCTGCATT+TGG | + | chr2_2:22247826-22247845 | Msa0244110:CDS | 35.0% | |
| TCTTGTGGTGAACATCATTA+TGG | + | chr2_2:22247849-22247868 | Msa0244110:CDS | 35.0% | |
| !! | CATCATTATGGCTTTGGTAT+TGG | + | chr2_2:22247861-22247880 | Msa0244110:CDS | 35.0% |
| TGGTAGAAACTGAAATACCA+TGG | - | chr2_2:22247951-22247970 | None:intergenic | 35.0% | |
| TATGTTCCGTTTCTTCTTCT+CGG | - | chr2_2:22248139-22248158 | None:intergenic | 35.0% | |
| ACGGAACATAAATGTACATG+GGG | + | chr2_2:22248149-22248168 | Msa0244110:CDS | 35.0% | |
| CAATCATTACACCAATACTC+TGG | - | chr2_2:22248203-22248222 | None:intergenic | 35.0% | |
| !! | CAGAGTATTGGTGTAATGAT+TGG | + | chr2_2:22248201-22248220 | Msa0244110:CDS | 35.0% |
| !! | GAGTATTGGTGTAATGATTG+GGG | + | chr2_2:22248203-22248222 | Msa0244110:CDS | 35.0% |
| !! | AGTATTGGTGTAATGATTGG+GGG | + | chr2_2:22248204-22248223 | Msa0244110:CDS | 35.0% |
| ! | AAACATTCTGGAAGTCTTGA+TGG | + | chr2_2:22248326-22248345 | Msa0244110:CDS | 35.0% |
| AGATGCTACTCAGATTCAAA+AGG | + | chr2_2:22248368-22248387 | Msa0244110:CDS | 35.0% | |
| GATGCTACTCAGATTCAAAA+GGG | + | chr2_2:22248369-22248388 | Msa0244110:CDS | 35.0% | |
| ATGCTACTCAGATTCAAAAG+GGG | + | chr2_2:22248370-22248389 | Msa0244110:CDS | 35.0% | |
| TGGGATATTATTGCGAACAT+GGG | + | chr2_2:22248757-22248776 | Msa0244110:three_prime_UTR | 35.0% | |
| GCAGCTAATAAGATACTCCA+AGG | - | chr2_2:22245618-22245637 | None:intergenic | 40.0% | |
| TGAGAAATCTAACACGAACC+CGG | - | chr2_2:22245692-22245711 | None:intergenic | 40.0% | |
| !! | GATTTTGGGCTTGTTTGGTT+TGG | + | chr2_2:22245857-22245876 | Msa0244110:intron | 40.0% |
| ! | GCTTATTTGAGCTTGTTTGC+TGG | + | chr2_2:22245879-22245898 | Msa0244110:intron | 40.0% |
| ! | AACGAAGTACAATGGTGTCA+AGG | - | chr2_2:22246468-22246487 | None:intergenic | 40.0% |
| AAGCATGGAACGAAGTACAA+TGG | - | chr2_2:22246476-22246495 | None:intergenic | 40.0% | |
| !! | ATTGGAGCTTGCTAACCAAT+TGG | + | chr2_2:22246608-22246627 | Msa0244110:intron | 40.0% |
| GGCTTGTACGATTTATGATG+AGG | + | chr2_2:22246629-22246648 | Msa0244110:intron | 40.0% | |
| !! | TTATAGAACAAAGGGCATCG+AGG | + | chr2_2:22246778-22246797 | Msa0244110:intron | 40.0% |
| !! | TATAGAACAAAGGGCATCGA+GGG | + | chr2_2:22246779-22246798 | Msa0244110:intron | 40.0% |
| TTGTGTGTGTGTGTGTAATC+GGG | - | chr2_2:22246829-22246848 | None:intergenic | 40.0% | |
| CTTGTGTGTGTGTGTGTAAT+CGG | - | chr2_2:22246830-22246849 | None:intergenic | 40.0% | |
| AGCTATTACGTAGTTGAACC+GGG | + | chr2_2:22247056-22247075 | Msa0244110:intron | 40.0% | |
| TTGTTGGTCATCCATTTCAG+AGG | + | chr2_2:22247116-22247135 | Msa0244110:intron | 40.0% | |
| ! | GGTGGTCTTAGATGTTGAAT+TGG | + | chr2_2:22247163-22247182 | Msa0244110:intron | 40.0% |
| CGGACATGAAAATAACGCAA+AGG | - | chr2_2:22247534-22247553 | None:intergenic | 40.0% | |
| !! | CGTTATTTTCATGTCCGTTG+AGG | + | chr2_2:22247537-22247556 | Msa0244110:CDS | 40.0% |
| AATACCACCAACTACCTCAA+CGG | - | chr2_2:22247554-22247573 | None:intergenic | 40.0% | |
| !! | TGAGGTAGTTGGTGGTATTA+AGG | + | chr2_2:22247555-22247574 | Msa0244110:CDS | 40.0% |
| CAATTAATATGGCTGCTTGC+TGG | + | chr2_2:22247739-22247758 | Msa0244110:CDS | 40.0% | |
| AAAAACCCATCCACTTCTTG+AGG | - | chr2_2:22247805-22247824 | None:intergenic | 40.0% | |
| GGTGAACATCATTATGGCTT+TGG | + | chr2_2:22247855-22247874 | Msa0244110:CDS | 40.0% | |
| AAACTGAAATACCATGGCTG+TGG | - | chr2_2:22247945-22247964 | None:intergenic | 40.0% | |
| ATGATGCTCATCTGTATGCT+TGG | - | chr2_2:22247971-22247990 | None:intergenic | 40.0% | |
| !! | CCTTTTGATTCACCAAGAAG+TGG | - | chr2_2:22248111-22248130 | None:intergenic | 40.0% |
| CCACTTCTTGGTGAATCAAA+AGG | + | chr2_2:22248108-22248127 | Msa0244110:CDS | 40.0% | |
| ATGTTCCGTTTCTTCTTCTC+GGG | - | chr2_2:22248138-22248157 | None:intergenic | 40.0% | |
| !! | TCTCAGCATGTTGATAGTTG+TGG | - | chr2_2:22248307-22248326 | None:intergenic | 40.0% |
| CAACATGCTGAGAAACATTC+TGG | + | chr2_2:22248314-22248333 | Msa0244110:CDS | 40.0% | |
| TCAGATTCAAAAGGGGCTAT+TGG | + | chr2_2:22248377-22248396 | Msa0244110:CDS | 40.0% | |
| ATTGGAGATGGAAGAAGTAG+TGG | + | chr2_2:22248395-22248414 | Msa0244110:CDS | 40.0% | |
| TGTTCATGAGCTGCACATAT+GGG | + | chr2_2:22248419-22248438 | Msa0244110:CDS | 40.0% | |
| CTGGGATATTATTGCGAACA+TGG | + | chr2_2:22248756-22248775 | Msa0244110:three_prime_UTR | 40.0% | |
| GGGATATTATTGCGAACATG+GGG | + | chr2_2:22248758-22248777 | Msa0244110:three_prime_UTR | 40.0% | |
| TTGGGGTTTATTCGGAGTGT+GGG | - | chr2_2:22245076-22245095 | None:intergenic | 45.0% | |
| ! | TTTGGGGTTTATTCGGAGTG+TGG | - | chr2_2:22245077-22245096 | None:intergenic | 45.0% |
| !! | TCTGCGCTTATTTTCGACCT+TGG | + | chr2_2:22245598-22245617 | Msa0244110:intron | 45.0% |
| TAGCTGCTGTATTCAACTCC+TGG | + | chr2_2:22245631-22245650 | Msa0244110:intron | 45.0% | |
| TGCTGTATTCAACTCCTGGA+AGG | + | chr2_2:22245635-22245654 | Msa0244110:intron | 45.0% | |
| GCTGTATTCAACTCCTGGAA+GGG | + | chr2_2:22245636-22245655 | Msa0244110:intron | 45.0% | |
| !! | AGAGAGAAAAGTACCCTTCC+AGG | - | chr2_2:22245652-22245671 | None:intergenic | 45.0% |
| CTGTTTATCCAAACAGGCCA+TGG | + | chr2_2:22246140-22246159 | Msa0244110:intron | 45.0% | |
| TGTCCGTAAGCACTTTCTTG+TGG | + | chr2_2:22246537-22246556 | Msa0244110:intron | 45.0% | |
| !! | CGTCCACAAGAAAGTGCTTA+CGG | - | chr2_2:22246543-22246562 | None:intergenic | 45.0% |
| TAAGCACTTTCTTGTGGACG+TGG | + | chr2_2:22246543-22246562 | Msa0244110:intron | 45.0% | |
| !! | TCGAAGAGAGGAGAAGTGTT+TGG | + | chr2_2:22246679-22246698 | Msa0244110:intron | 45.0% |
| ! | AATTAGGGCCTTTTGGCATG+TGG | + | chr2_2:22246713-22246732 | Msa0244110:intron | 45.0% |
| ! | ATTAGGGCCTTTTGGCATGT+GGG | + | chr2_2:22246714-22246733 | Msa0244110:intron | 45.0% |
| ATGTCGTTGAGCGTCTGTAA+GGG | + | chr2_2:22246737-22246756 | Msa0244110:intron | 45.0% | |
| ACCTATGACCCTCAAAGCTT+TGG | + | chr2_2:22246893-22246912 | Msa0244110:intron | 45.0% | |
| !! | TCCAAAGCTTTGAGGGTCAT+AGG | - | chr2_2:22246897-22246916 | None:intergenic | 45.0% |
| TATACTATCTCCTCCCTCAG+AGG | + | chr2_2:22247018-22247037 | Msa0244110:intron | 45.0% | |
| ATACTATCTCCTCCCTCAGA+GGG | + | chr2_2:22247019-22247038 | Msa0244110:intron | 45.0% | |
| GTTGATGCAGCTCCTATTAG+TGG | + | chr2_2:22247192-22247211 | Msa0244110:intron | 45.0% | |
| !! | GTTCTGAGGACTCCACTAAT+AGG | - | chr2_2:22247207-22247226 | None:intergenic | 45.0% |
| ! | TTGCAGATGGAAGCACAAAG+TGG | + | chr2_2:22247352-22247371 | Msa0244110:intron | 45.0% |
| AAGCACAAAGTGGTCACCAT+GGG | + | chr2_2:22247362-22247381 | Msa0244110:CDS | 45.0% | |
| AGACGCAGGATCTATTTCGA+AGG | + | chr2_2:22247459-22247478 | Msa0244110:CDS | 45.0% | |
| TTCATGTCCGTTGAGGTAGT+TGG | + | chr2_2:22247544-22247563 | Msa0244110:CDS | 45.0% | |
| !! | TTTCTATATGGGCTGGAGGA+TGG | + | chr2_2:22247650-22247669 | Msa0244110:CDS | 45.0% |
| !! | TTCTATATGGGCTGGAGGAT+GGG | + | chr2_2:22247651-22247670 | Msa0244110:CDS | 45.0% |
| CCAAATGACTGACGAGGATT+CGG | - | chr2_2:22247679-22247698 | None:intergenic | 45.0% | |
| ACCTGCAATGAGTCTAGCAA+TGG | - | chr2_2:22247782-22247801 | None:intergenic | 45.0% | |
| !! | AGTTGCTGCATTTGGTCTTG+TGG | + | chr2_2:22247834-22247853 | Msa0244110:CDS | 45.0% |
| ! | TTGGTATTGGGCCATGATCA+CGG | + | chr2_2:22247874-22247893 | Msa0244110:CDS | 45.0% |
| GATGAGCATCATCACACACA+TGG | + | chr2_2:22247979-22247998 | Msa0244110:CDS | 45.0% | |
| CTTTGTGGTCATGGTCATGA+TGG | - | chr2_2:22248077-22248096 | None:intergenic | 45.0% | |
| TCATGACCATGACCACAAAG+AGG | + | chr2_2:22248077-22248096 | Msa0244110:CDS | 45.0% | |
| CAGTAACCTCTTTGTGGTCA+TGG | - | chr2_2:22248086-22248105 | None:intergenic | 45.0% | |
| GTGGTTCAGTAACCTCTTTG+TGG | - | chr2_2:22248092-22248111 | None:intergenic | 45.0% | |
| GAGGTTACTGAACCACTTCT+TGG | + | chr2_2:22248096-22248115 | Msa0244110:CDS | 45.0% | |
| GGAGACTCTATCCAGAGTAT+TGG | + | chr2_2:22248189-22248208 | Msa0244110:CDS | 45.0% | |
| TGATTGGGGGAGCAATCATA+TGG | + | chr2_2:22248217-22248236 | Msa0244110:CDS | 45.0% | |
| TCAAAAGGGGCTATTGGAGA+TGG | + | chr2_2:22248383-22248402 | Msa0244110:CDS | 45.0% | |
| CTGTTCATGAGCTGCACATA+TGG | + | chr2_2:22248418-22248437 | Msa0244110:CDS | 45.0% | |
| CACATATGGGCCATTACAGT+GGG | + | chr2_2:22248432-22248451 | Msa0244110:CDS | 45.0% | |
| ACATATGGGCCATTACAGTG+GGG | + | chr2_2:22248433-22248452 | Msa0244110:CDS | 45.0% | |
| CAATACCTTCCCCACTGTAA+TGG | - | chr2_2:22248445-22248464 | None:intergenic | 45.0% | |
| ACAAGGTCGTAGACTACATC+AGG | + | chr2_2:22248517-22248536 | Msa0244110:CDS | 45.0% | |
| ACGACATCCCACATGCCAAA+AGG | - | chr2_2:22246724-22246743 | None:intergenic | 50.0% | |
| GATGTCGTTGAGCGTCTGTA+AGG | + | chr2_2:22246736-22246755 | Msa0244110:intron | 50.0% | |
| ! | ATGTAGTAACCCTCTGAGGG+AGG | - | chr2_2:22247031-22247050 | None:intergenic | 50.0% |
| GAAGCACAAAGTGGTCACCA+TGG | + | chr2_2:22247361-22247380 | Msa0244110:CDS | 50.0% | |
| AGTGGAGAACTCCCTGATGT+AGG | + | chr2_2:22247400-22247419 | Msa0244110:CDS | 50.0% | |
| GAGAACTCCCTGATGTAGGA+AGG | + | chr2_2:22247404-22247423 | Msa0244110:CDS | 50.0% | |
| GCGAAAGCTTCTGATAGCAG+TGG | + | chr2_2:22247507-22247526 | Msa0244110:CDS | 50.0% | |
| ATGTCCGTTGAGGTAGTTGG+TGG | + | chr2_2:22247547-22247566 | Msa0244110:CDS | 50.0% | |
| CCGAATCCTCGTCAGTCATT+TGG | + | chr2_2:22247676-22247695 | Msa0244110:CDS | 50.0% | |
| GCCATTGCTAGACTCATTGC+AGG | + | chr2_2:22247778-22247797 | Msa0244110:CDS | 50.0% | |
| CATTGCAGGTCCTCAAGAAG+TGG | + | chr2_2:22247792-22247811 | Msa0244110:CDS | 50.0% | |
| CAGGTCCTCAAGAAGTGGAT+GGG | + | chr2_2:22247797-22247816 | Msa0244110:CDS | 50.0% | |
| CATGGCCATGGACATGATCA+CGG | + | chr2_2:22247898-22247917 | Msa0244110:CDS | 50.0% | |
| GCGCATCATCATGAGTATGG+TGG | - | chr2_2:22248053-22248072 | None:intergenic | 50.0% | |
| GGTGCGCATCATCATGAGTA+TGG | - | chr2_2:22248056-22248075 | None:intergenic | 50.0% | |
| TCCGTTTCTTCTTCTCGGGT+CGG | - | chr2_2:22248134-22248153 | None:intergenic | 50.0% | |
| GGATAGAGTCTCCAAGTACG+TGG | - | chr2_2:22248182-22248201 | None:intergenic | 50.0% | |
| TGAGTAGCATCTATCTCGCG+TGG | - | chr2_2:22248360-22248379 | None:intergenic | 50.0% | |
| GCACATATGGGCCATTACAG+TGG | + | chr2_2:22248431-22248450 | Msa0244110:CDS | 50.0% | |
| ATCACATCAGCGTCTGCTTC+AGG | - | chr2_2:22248492-22248511 | None:intergenic | 50.0% | |
| AGGTCGTAGACTACATCAGG+AGG | + | chr2_2:22248520-22248539 | Msa0244110:CDS | 50.0% | |
| GGTCGTAGACTACATCAGGA+GGG | + | chr2_2:22248521-22248540 | Msa0244110:CDS | 50.0% | |
| !! | TGTGTGTAATCGGGAGCGCT+GGG | - | chr2_2:22246820-22246839 | None:intergenic | 55.0% |
| CCTGCGTCTGAGAACTCACA+TGG | - | chr2_2:22247448-22247467 | None:intergenic | 55.0% | |
| CCATGTGAGTTCTCAGACGC+AGG | + | chr2_2:22247445-22247464 | Msa0244110:CDS | 55.0% | |
| GCAGGTCCTCAAGAAGTGGA+TGG | + | chr2_2:22247796-22247815 | Msa0244110:CDS | 55.0% | |
| CGTGATCATGTCCATGGCCA+TGG | - | chr2_2:22247900-22247919 | None:intergenic | 55.0% | |
| CATGGACATGATCACGGCCA+CGG | + | chr2_2:22247904-22247923 | Msa0244110:CDS | 55.0% | |
| GGCCACGGACATGATCATCA+TGG | + | chr2_2:22247919-22247938 | Msa0244110:CDS | 55.0% | |
| GGCCATGATGATCATGTCCG+TGG | - | chr2_2:22247924-22247943 | None:intergenic | 55.0% | |
| GATCATCATGGCCACAGCCA+TGG | + | chr2_2:22247931-22247950 | Msa0244110:CDS | 55.0% | |
| GCCGACCCGAGAAGAAGAAA+CGG | + | chr2_2:22248130-22248149 | Msa0244110:CDS | 55.0% | |
| GGGGCATATCTCCACGTACT+TGG | + | chr2_2:22248168-22248187 | Msa0244110:CDS | 55.0% | |
| ATGGGCCATTACAGTGGGGA+AGG | + | chr2_2:22248437-22248456 | Msa0244110:CDS | 55.0% | |
| AGCAGACGCTGATGTGATGC+TGG | + | chr2_2:22248494-22248513 | Msa0244110:CDS | 55.0% | |
| CGCTGATGTGATGCTGGACA+AGG | + | chr2_2:22248500-22248519 | Msa0244110:CDS | 55.0% | |
| ! | GTGTGTGTAATCGGGAGCGC+TGG | - | chr2_2:22246821-22246840 | None:intergenic | 60.0% |
| TTGGGCCATGATCACGGCCA+TGG | + | chr2_2:22247880-22247899 | Msa0244110:CDS | 60.0% | |
| CATGGCCATGGCCGTGATCA+TGG | - | chr2_2:22247888-22247907 | None:intergenic | 60.0% | |
| CATGATCACGGCCATGGCCA+TGG | + | chr2_2:22247886-22247905 | Msa0244110:CDS | 60.0% | |
| CGTGGCCGTGATCATGTCCA+TGG | - | chr2_2:22247906-22247925 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 22245067 | 22248797 | 22245067 | ID=Msa0244110;Name=Msa0244110 |
| chr2_2 | mRNA | 22245067 | 22248797 | 22245067 | ID=Msa0244110-mRNA-1;Parent=Msa0244110;Name=Msa0244110-mRNA-1;_AED=0.00;_eAED=0.00;_QI=163|1|1|1|0|0.5|2|213|408 |
| chr2_2 | exon | 22245067 | 22245229 | 22245067 | ID=Msa0244110-mRNA-1:exon:8584;Parent=Msa0244110-mRNA-1 |
| chr2_2 | exon | 22247358 | 22248797 | 22247358 | ID=Msa0244110-mRNA-1:exon:8585;Parent=Msa0244110-mRNA-1 |
| chr2_2 | five_prime_UTR | 22245067 | 22245229 | 22245067 | ID=Msa0244110-mRNA-1:five_prime_utr;Parent=Msa0244110-mRNA-1 |
| chr2_2 | CDS | 22247358 | 22248584 | 22247358 | ID=Msa0244110-mRNA-1:cds;Parent=Msa0244110-mRNA-1 |
| chr2_2 | three_prime_UTR | 22248585 | 22248797 | 22248585 | ID=Msa0244110-mRNA-1:three_prime_utr;Parent=Msa0244110-mRNA-1 |
| Gene Sequence |
| Protein sequence |
