Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0255620 | AFK45555.1 | 94.231 | 312 | 11 | 3 | 11 | 316 | 1 | 311 | 0.0 | 598 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0255620 | sp|Q9LKA0|IQD10_ARATH | 54.741 | 232 | 91 | 4 | 11 | 242 | 1 | 218 | 1.01e-78 | 243 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0255620 | I3SZ63 | 94.231 | 312 | 11 | 3 | 11 | 316 | 1 | 311 | 0.0 | 598 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0018060 | Msa0255620 | 0.814907 | 1.212710e-51 | -8.615850e-47 |
| Msa0052380 | Msa0255620 | 0.808980 | 2.371723e-50 | -8.615850e-47 |
| Msa0199960 | Msa0255620 | 0.848632 | 5.415798e-60 | -8.615850e-47 |
| Msa0228250 | Msa0255620 | 0.965417 | 1.408697e-124 | -8.615850e-47 |
| Msa0242490 | Msa0255620 | 0.859567 | 3.783843e-63 | -8.615850e-47 |
| Msa0243600 | Msa0255620 | 0.832571 | 8.761526e-56 | -8.615850e-47 |
| Msa0255620 | Msa0280690 | 0.857401 | 1.673664e-62 | -8.615850e-47 |
| Msa0255620 | Msa0282220 | 0.826114 | 3.239258e-54 | -8.615850e-47 |
| Msa0255620 | Msa0294720 | 0.959115 | 4.356786e-117 | -8.615850e-47 |
| Msa0255620 | Msa0319940 | 0.836237 | 1.052872e-56 | -8.615850e-47 |
| Msa0255620 | Msa0333070 | 0.864570 | 1.105930e-64 | -8.615850e-47 |
| Msa0255620 | Msa0389880 | 0.818360 | 2.041527e-52 | -8.615850e-47 |
| Msa0255620 | Msa0580580 | 0.800755 | 1.242122e-48 | -8.615850e-47 |
| Msa0255620 | Msa1037550 | 0.817565 | 3.087084e-52 | -8.615850e-47 |
| Msa0255620 | Msa1418990 | 0.807030 | 6.166614e-50 | -8.615850e-47 |
| Msa0255620 | Msa1436420 | 0.805250 | 1.461632e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0255620 | MtrunA17_Chr2g0316401 | 93.168 | 322 | 10 | 4 | 1 | 316 | 1 | 316 | 0.0 | 584 |
| Msa0255620 | MtrunA17_Chr2g0283321 | 47.119 | 295 | 134 | 7 | 11 | 296 | 1 | 282 | 5.21e-79 | 242 |
| Msa0255620 | MtrunA17_Chr4g0025441 | 43.373 | 166 | 93 | 1 | 75 | 240 | 98 | 262 | 1.95e-32 | 124 |
| Msa0255620 | MtrunA17_Chr1g0200161 | 37.427 | 171 | 98 | 4 | 74 | 238 | 142 | 309 | 4.46e-30 | 119 |
| Msa0255620 | MtrunA17_Chr6g0462191 | 36.313 | 179 | 102 | 4 | 67 | 238 | 101 | 274 | 1.03e-28 | 114 |
| Msa0255620 | MtrunA17_Chr1g0181581 | 35.260 | 173 | 103 | 3 | 66 | 234 | 109 | 276 | 1.35e-26 | 108 |
| Msa0255620 | MtrunA17_Chr7g0263731 | 37.500 | 184 | 101 | 5 | 74 | 252 | 109 | 283 | 4.99e-25 | 104 |
| Msa0255620 | MtrunA17_Chr3g0135851 | 35.359 | 181 | 104 | 5 | 75 | 245 | 93 | 270 | 3.55e-22 | 96.3 |
| Msa0255620 | MtrunA17_Chr4g0045641 | 32.258 | 186 | 105 | 6 | 64 | 234 | 137 | 316 | 5.99e-20 | 90.1 |
| Msa0255620 | MtrunA17_Chr8g0346021 | 30.645 | 186 | 104 | 6 | 73 | 240 | 127 | 305 | 1.98e-15 | 76.6 |
| Msa0255620 | MtrunA17_Chr8g0342551 | 30.412 | 194 | 126 | 4 | 75 | 260 | 92 | 284 | 2.66e-13 | 70.1 |
| Msa0255620 | MtrunA17_Chr2g0330051 | 32.759 | 174 | 106 | 4 | 75 | 238 | 80 | 252 | 2.51e-11 | 63.9 |
| Msa0255620 | MtrunA17_Chr4g0020671 | 26.506 | 166 | 112 | 3 | 69 | 232 | 97 | 254 | 8.99e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0255620 | AT3G15050.1 | 54.741 | 232 | 91 | 4 | 11 | 242 | 1 | 218 | 1.03e-79 | 243 |
| Msa0255620 | AT2G33990.1 | 49.254 | 201 | 96 | 4 | 75 | 272 | 49 | 246 | 2.54e-62 | 199 |
| Msa0255620 | AT3G22190.3 | 35.841 | 226 | 141 | 3 | 72 | 295 | 87 | 310 | 4.88e-31 | 121 |
| Msa0255620 | AT3G22190.2 | 35.841 | 226 | 141 | 3 | 72 | 295 | 87 | 310 | 4.88e-31 | 121 |
| Msa0255620 | AT3G22190.4 | 35.841 | 226 | 141 | 3 | 72 | 295 | 87 | 310 | 4.88e-31 | 121 |
| Msa0255620 | AT3G22190.1 | 35.841 | 226 | 141 | 3 | 72 | 295 | 87 | 310 | 4.88e-31 | 121 |
| Msa0255620 | AT2G26180.1 | 40.571 | 175 | 95 | 4 | 75 | 241 | 86 | 259 | 2.59e-29 | 116 |
| Msa0255620 | AT2G26410.2 | 36.471 | 170 | 100 | 4 | 75 | 239 | 150 | 316 | 8.28e-29 | 116 |
| Msa0255620 | AT2G26410.1 | 36.471 | 170 | 100 | 4 | 75 | 239 | 150 | 316 | 8.28e-29 | 116 |
| Msa0255620 | AT5G03040.1 | 32.189 | 233 | 129 | 9 | 19 | 238 | 64 | 280 | 8.29e-27 | 110 |
| Msa0255620 | AT5G03040.3 | 32.189 | 233 | 129 | 9 | 19 | 238 | 64 | 280 | 8.29e-27 | 110 |
| Msa0255620 | AT5G03040.2 | 32.189 | 233 | 129 | 9 | 19 | 238 | 64 | 280 | 8.29e-27 | 110 |
| Msa0255620 | AT3G52290.1 | 35.227 | 176 | 106 | 4 | 66 | 238 | 101 | 271 | 2.34e-26 | 108 |
| Msa0255620 | AT3G09710.1 | 36.416 | 173 | 92 | 5 | 75 | 238 | 110 | 273 | 1.06e-25 | 106 |
| Msa0255620 | AT3G09710.2 | 34.066 | 182 | 98 | 4 | 75 | 238 | 110 | 287 | 1.09e-25 | 107 |
| Msa0255620 | AT1G72670.1 | 35.838 | 173 | 102 | 3 | 75 | 241 | 95 | 264 | 1.58e-24 | 103 |
| Msa0255620 | AT3G59690.2 | 32.948 | 173 | 102 | 7 | 61 | 230 | 157 | 318 | 2.30e-23 | 100 |
| Msa0255620 | AT3G59690.1 | 32.948 | 173 | 102 | 7 | 61 | 230 | 157 | 318 | 2.30e-23 | 100 |
| Msa0255620 | AT1G17480.1 | 34.091 | 176 | 93 | 6 | 56 | 229 | 85 | 239 | 2.65e-20 | 90.5 |
| Msa0255620 | AT2G43680.4 | 30.939 | 181 | 94 | 7 | 61 | 230 | 310 | 470 | 1.11e-17 | 84.0 |
| Msa0255620 | AT2G43680.2 | 30.939 | 181 | 94 | 7 | 61 | 230 | 310 | 470 | 1.11e-17 | 84.0 |
| Msa0255620 | AT2G43680.3 | 30.939 | 181 | 94 | 7 | 61 | 230 | 310 | 470 | 1.11e-17 | 84.0 |
| Msa0255620 | AT2G43680.5 | 30.939 | 181 | 94 | 7 | 61 | 230 | 310 | 470 | 1.11e-17 | 84.0 |
| Msa0255620 | AT2G43680.1 | 30.939 | 181 | 94 | 7 | 61 | 230 | 311 | 471 | 1.12e-17 | 84.0 |
| Msa0255620 | AT3G49260.1 | 25.888 | 197 | 121 | 4 | 75 | 252 | 122 | 312 | 4.67e-17 | 82.0 |
| Msa0255620 | AT3G49260.4 | 25.888 | 197 | 121 | 4 | 75 | 252 | 122 | 312 | 4.67e-17 | 82.0 |
| Msa0255620 | AT3G49260.2 | 25.888 | 197 | 121 | 4 | 75 | 252 | 122 | 312 | 4.67e-17 | 82.0 |
| Msa0255620 | AT3G49260.3 | 25.758 | 198 | 121 | 4 | 75 | 252 | 122 | 313 | 7.68e-17 | 81.3 |
| Msa0255620 | AT4G00820.1 | 27.488 | 211 | 125 | 7 | 48 | 241 | 112 | 311 | 1.44e-15 | 77.4 |
| Msa0255620 | AT1G01110.2 | 24.775 | 222 | 145 | 7 | 38 | 241 | 86 | 303 | 7.74e-13 | 69.3 |
Find 99 sgRNAs with CRISPR-Local
Find 242 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATGCATTTCGTTCATTTA+TGG | 0.156996 | 2_2:-49777673 | Msa0255620:intron |
| ACTATTATTCCCTTCATTTC+AGG | 0.158527 | 2_2:-49775285 | Msa0255620:three_prime_UTR |
| GCCGTTGAGTTTCTTTGTTT+TGG | 0.177224 | 2_2:+49775699 | None:intergenic |
| TTGGTTTCTTCATCTTCTTT+TGG | 0.194840 | 2_2:-49775443 | Msa0255620:three_prime_UTR |
| GTGGTTCATCTTATCTAATT+TGG | 0.248605 | 2_2:+49775663 | None:intergenic |
| GAAGAACATTTCAACATCTA+AGG | 0.257374 | 2_2:-49776347 | Msa0255620:CDS |
| CCAAACTGTAACCAGTATTT+TGG | 0.272065 | 2_2:-49775823 | Msa0255620:CDS |
| CAGCGCGTCCTTGGGAGGTT+CGG | 0.294645 | 2_2:-49775738 | Msa0255620:CDS |
| TTGCATCCTTGTTTCAGTTC+AGG | 0.300797 | 2_2:-49779136 | Msa0255620:intron |
| AATGAAATGAAATGATAATT+AGG | 0.309959 | 2_2:+49779158 | None:intergenic |
| GTTGGGTTGCAGCGCGTCCT+TGG | 0.318135 | 2_2:-49775747 | Msa0255620:CDS |
| CTCCATCATCAAACCTTCAT+TGG | 0.319760 | 2_2:+49777746 | None:intergenic |
| TTCATGTTCTTGCTATTAGA+AGG | 0.344320 | 2_2:-49778810 | Msa0255620:five_prime_UTR |
| CTAATTTGGTCTTCTGCTGC+TGG | 0.344502 | 2_2:+49775677 | None:intergenic |
| AGATTCTCACAAGCCAAATA+TGG | 0.346709 | 2_2:+49775410 | None:intergenic |
| TGTTGTTCCTGTTTGGTCTC+TGG | 0.347194 | 2_2:+49776284 | None:intergenic |
| GTTGTCACACAACACTATTA+TGG | 0.372033 | 2_2:-49779290 | None:intergenic |
| TGGAGAGGACAGTTCCTTCC+AGG | 0.372133 | 2_2:-49777728 | Msa0255620:CDS |
| TTGGAGCTGGATGGAGCGTT+GGG | 0.373478 | 2_2:-49775764 | Msa0255620:CDS |
| CTATTAGAAGGTGCACTTGA+TGG | 0.373672 | 2_2:-49778798 | Msa0255620:intron |
| CCAAAATACTGGTTACAGTT+TGG | 0.386021 | 2_2:+49775823 | None:intergenic |
| GTTGGAGCTGGATGGAGCGT+TGG | 0.388313 | 2_2:-49775765 | Msa0255620:CDS |
| CACTTAACTACATACATTCA+TGG | 0.393069 | 2_2:-49776263 | Msa0255620:CDS |
| GGCATATGCTTTCTCTCATC+AGG | 0.394693 | 2_2:-49775927 | Msa0255620:intron |
| ACTAAAGCTGCCATGTCAAA+TGG | 0.395308 | 2_2:-49775607 | Msa0255620:CDS |
| TTGGGTTGCAGCGCGTCCTT+GGG | 0.397902 | 2_2:-49775746 | Msa0255620:CDS |
| GAAACAGCTATCTTATTTCA+AGG | 0.401239 | 2_2:+49778830 | None:intergenic |
| GGTCAGGCTTCTTATAGCCT+TGG | 0.403857 | 2_2:-49775802 | Msa0255620:CDS |
| TAGCTGTTTCTCAACAAGAA+TGG | 0.414876 | 2_2:-49778460 | Msa0255620:CDS |
| AGCTGTTTCTCAACAAGAAT+GGG | 0.421083 | 2_2:-49778459 | Msa0255620:CDS |
| AAGAAGCCTGACCAAAATAC+TGG | 0.421606 | 2_2:+49775812 | None:intergenic |
| AGTTAAGTGTTGTTCCTGTT+TGG | 0.425963 | 2_2:+49776277 | None:intergenic |
| CAAGAATGGGTCCAAAGAAA+TGG | 0.430866 | 2_2:-49778446 | Msa0255620:CDS |
| AGCGCGTCCTTGGGAGGTTC+GGG | 0.435357 | 2_2:-49775737 | Msa0255620:CDS |
| GGCTTGTGAGAATCTATCAT+TGG | 0.440940 | 2_2:-49775402 | Msa0255620:three_prime_UTR |
| ATGAGGGCTGTGGTTCCCAT+TGG | 0.445641 | 2_2:+49777788 | None:intergenic |
| AGGGCTGTGGTTCCCATTGG+AGG | 0.449291 | 2_2:+49777791 | None:intergenic |
| TCCATCATCAAACCTTCATT+GGG | 0.455643 | 2_2:+49777747 | None:intergenic |
| GACATGGCAGCTTTAGTCAA+TGG | 0.463459 | 2_2:+49775613 | None:intergenic |
| AAGAAAGCTGGGGTTGGAGC+TGG | 0.466713 | 2_2:-49775777 | Msa0255620:CDS |
| AATCACTGCTCCTGAAATGA+AGG | 0.468044 | 2_2:+49775275 | None:intergenic |
| TTCTTCTCGCTGATGTATCC+TGG | 0.469935 | 2_2:+49775976 | None:intergenic |
| CAGGATTAAGCAAAAGAGAT+TGG | 0.472339 | 2_2:-49776187 | Msa0255620:CDS |
| CTTTCGTTGAAACATGGTAA+TGG | 0.482595 | 2_2:-49775311 | Msa0255620:three_prime_UTR |
| TTGATTCTTCATGAGGGCTG+TGG | 0.486263 | 2_2:+49777778 | None:intergenic |
| CTAAAGCTGCCATGTCAAAT+GGG | 0.486923 | 2_2:-49775606 | Msa0255620:CDS |
| ATAGCCTTGGTAAAGAAAGC+TGG | 0.489924 | 2_2:-49775789 | Msa0255620:CDS |
| GCTTGTGAGAATCTATCATT+GGG | 0.491190 | 2_2:-49775401 | Msa0255620:three_prime_UTR |
| AAGAACATTTCAACATCTAA+GGG | 0.495562 | 2_2:-49776346 | Msa0255620:CDS |
| GTGTTACTTGATTCTTCATG+AGG | 0.498076 | 2_2:+49777771 | None:intergenic |
| TAGCCTTGGTAAAGAAAGCT+GGG | 0.502264 | 2_2:-49775788 | Msa0255620:CDS |
| TTCACAATATTGCTGCTACT+CGG | 0.514388 | 2_2:-49777701 | Msa0255620:CDS |
| TTGGTAAAGAAAGCTGGGGT+TGG | 0.518496 | 2_2:-49775783 | Msa0255620:CDS |
| AGATAAATCAAACCAAGAAA+AGG | 0.519572 | 2_2:-49778388 | Msa0255620:intron |
| GGGCTGTGGTTCCCATTGGA+GGG | 0.523559 | 2_2:+49777792 | None:intergenic |
| TTATAATCAGAAGGAAGAAA+CGG | 0.527194 | 2_2:-49778416 | Msa0255620:CDS |
| TCAAGTAACACTCCCAATGA+AGG | 0.535092 | 2_2:-49777759 | Msa0255620:CDS |
| TGCTAGCTTTCGTTGAAACA+TGG | 0.535564 | 2_2:-49775317 | Msa0255620:three_prime_UTR |
| TCCCAATGAAGGTTTGATGA+TGG | 0.538229 | 2_2:-49777748 | Msa0255620:CDS |
| CAATCTACTGAACCCTCCAA+TGG | 0.545908 | 2_2:-49777804 | Msa0255620:CDS |
| GTGCAGCGGTTCTGAAACAA+TGG | 0.546419 | 2_2:-49776011 | Msa0255620:CDS |
| ATCGCCATTAAAATCACCAT+TGG | 0.547703 | 2_2:-49775566 | Msa0255620:CDS |
| TTGTAGAGGATGATTAATGA+TGG | 0.548326 | 2_2:+49779203 | None:intergenic |
| AATCTACTGAACCCTCCAAT+GGG | 0.550183 | 2_2:-49777803 | Msa0255620:CDS |
| GACACGGAAGCTTTAGCCAA+TGG | 0.552731 | 2_2:+49775550 | None:intergenic |
| GGTTGCAGCGCGTCCTTGGG+AGG | 0.553914 | 2_2:-49775743 | Msa0255620:CDS |
| CACATGGCCAGAGACCAAAC+AGG | 0.554081 | 2_2:-49776291 | Msa0255620:CDS |
| AATGCGAAGGAGACTGAGAA+AGG | 0.557321 | 2_2:-49775526 | Msa0255620:CDS |
| GGTTTAAAATTATAATCAGA+AGG | 0.564252 | 2_2:-49778425 | Msa0255620:CDS |
| ACTCTCCTTCCCATTTGACA+TGG | 0.564367 | 2_2:+49775597 | None:intergenic |
| AGCTTCCGTGTCAAATGCGA+AGG | 0.566653 | 2_2:-49775539 | Msa0255620:CDS |
| CAATGGAAGAGATACTATCC+AGG | 0.570614 | 2_2:-49775994 | Msa0255620:CDS |
| ATCACTGCTCCTGAAATGAA+GGG | 0.571891 | 2_2:+49775276 | None:intergenic |
| AGTCTCCTTCGCATTTGACA+CGG | 0.580502 | 2_2:+49775534 | None:intergenic |
| CTGTTTGGTCTCTGGCCATG+TGG | 0.581097 | 2_2:+49776292 | None:intergenic |
| AGCTGCCATGTCAAATGGGA+AGG | 0.581376 | 2_2:-49775602 | Msa0255620:CDS |
| TGTGTATGATAACAGCAGCC+AGG | 0.581859 | 2_2:-49776206 | Msa0255620:CDS |
| AACCCCAGCTTTCTTTACCA+AGG | 0.586825 | 2_2:+49775785 | None:intergenic |
| ACTTGAACCCGAACCTCCCA+AGG | 0.587510 | 2_2:+49775730 | None:intergenic |
| TGTTACTTGATTCTTCATGA+GGG | 0.588183 | 2_2:+49777772 | None:intergenic |
| GAAATGAAATGATAATTAGG+AGG | 0.588318 | 2_2:+49779161 | None:intergenic |
| CCAATACCTGAACTGAAACA+AGG | 0.592576 | 2_2:+49779130 | None:intergenic |
| AGCAATATTGTGAATCAACC+TGG | 0.594625 | 2_2:+49777710 | None:intergenic |
| TGAATGTATCCCAGGTGGAA+TGG | 0.600817 | 2_2:-49776033 | Msa0255620:intron |
| CAAGAGGCTTACAATTGTAG+AGG | 0.612368 | 2_2:+49779189 | None:intergenic |
| AGCTTTAATTCAAGACCACA+TGG | 0.613946 | 2_2:-49776307 | Msa0255620:CDS |
| ATGAAGGTTTGATGATGGAG+AGG | 0.619518 | 2_2:-49777743 | Msa0255620:CDS |
| TCCCAGGTGGAATGGTGCAG+CGG | 0.626788 | 2_2:-49776025 | Msa0255620:intron |
| AAGCTGGGGTTGGAGCTGGA+TGG | 0.631067 | 2_2:-49775773 | Msa0255620:CDS |
| CCCAAAACAAAGAAACTCAA+CGG | 0.631804 | 2_2:-49775700 | Msa0255620:CDS |
| ATGAGAGAAAGCATATGCCA+TGG | 0.645984 | 2_2:+49775931 | None:intergenic |
| GGCTAAGATTAATGAGCTCG+AGG | 0.646302 | 2_2:-49776145 | Msa0255620:CDS |
| AATCAAACGAGAGCGAGCCA+TGG | 0.651456 | 2_2:-49775948 | Msa0255620:CDS |
| ATATTGTGAATCAACCTGGA+AGG | 0.653405 | 2_2:+49777714 | None:intergenic |
| TAATTAGGAGGATATACAAG+AGG | 0.670643 | 2_2:+49779173 | None:intergenic |
| AGAACATTTCAACATCTAAG+GGG | 0.685065 | 2_2:-49776345 | Msa0255620:CDS |
| AGCCTTGGTAAAGAAAGCTG+GGG | 0.695007 | 2_2:-49775787 | Msa0255620:CDS |
| TAAGATTAATGAGCTCGAGG+TGG | 0.704063 | 2_2:-49776142 | Msa0255620:intron |
| TGGATAGTAATGTTAAGACG+TGG | 0.744653 | 2_2:+49779223 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTAATGAAATTCTTT+TGG | + | chr2_2:49776458-49776477 | None:intergenic | 10.0% |
| !!! | AGTTTTAAATCAAATTTAAA+TGG | - | chr2_2:49777540-49777559 | Msa0255620:intron | 10.0% |
| !! | AATGAAATGAAATGATAATT+AGG | + | chr2_2:49775352-49775371 | None:intergenic | 15.0% |
| !!! | TTCAAAAGTTTATTTTTTTG+AGG | - | chr2_2:49775756-49775775 | Msa0255620:CDS | 15.0% |
| !!! | TCAAAAGTTTATTTTTTTGA+GGG | - | chr2_2:49775757-49775776 | Msa0255620:CDS | 15.0% |
| !!! | ATAATTTTAAACCATTTCTT+TGG | + | chr2_2:49776075-49776094 | None:intergenic | 15.0% |
| !!! | TTTGCAAATTTTAAAGTTAA+AGG | + | chr2_2:49776171-49776190 | None:intergenic | 15.0% |
| !!! | ACTTTTTTTTTTATTACTAC+TGG | - | chr2_2:49777648-49777667 | Msa0255620:intron | 15.0% |
| !! | AAAATTATCTGTCATATTAT+GGG | + | chr2_2:49777876-49777895 | None:intergenic | 15.0% |
| !! | TAAAATTATCTGTCATATTA+TGG | + | chr2_2:49777877-49777896 | None:intergenic | 15.0% |
| !! | AAAATTATCTGTCATATTAT+GGG | + | chr2_2:49777876-49777895 | None:intergenic | 15.0% |
| !! | TAAAATTATCTGTCATATTA+TGG | + | chr2_2:49777877-49777896 | None:intergenic | 15.0% |
| !! | CATTTCATATATGAAGAAAA+GGG | - | chr2_2:49775433-49775452 | Msa0255620:three_prime_UTR | 20.0% |
| !! | ATTTCATATATGAAGAAAAG+GGG | - | chr2_2:49775434-49775453 | Msa0255620:three_prime_UTR | 20.0% |
| !! | TATATGTGCATAGTTAATTT+GGG | - | chr2_2:49775574-49775593 | Msa0255620:CDS | 20.0% |
| !! | TCATCAAACAAACATTAAAA+GGG | + | chr2_2:49775935-49775954 | None:intergenic | 20.0% |
| !! | TTCATCAAACAAACATTAAA+AGG | + | chr2_2:49775936-49775955 | None:intergenic | 20.0% |
| !!! | GGTTTAAAATTATAATCAGA+AGG | - | chr2_2:49776082-49776101 | Msa0255620:intron | 20.0% |
| !!! | CAAACTTAGTATTTTCATAA+GGG | + | chr2_2:49777217-49777236 | None:intergenic | 20.0% |
| !! | AAAATTCTATTTCCTTTAAG+TGG | - | chr2_2:49777266-49777285 | Msa0255620:intron | 20.0% |
| !! | ATAAAGTTCTATACTATCAA+AGG | - | chr2_2:49777404-49777423 | Msa0255620:intron | 20.0% |
| !! | TTTCAAACAGTTATAAAAGA+GGG | + | chr2_2:49777777-49777796 | None:intergenic | 20.0% |
| !! | TTTCAAACAGTTATAAAAGA+GGG | + | chr2_2:49777777-49777796 | None:intergenic | 20.0% |
| !! | AATAGAGATAACACTTTAAA+AGG | + | chr2_2:49778420-49778439 | None:intergenic | 20.0% |
| !!! | TCAAATTTTGTTTTCAAGAA+AGG | + | chr2_2:49778632-49778651 | None:intergenic | 20.0% |
| ! | GAAATGAAATGATAATTAGG+AGG | + | chr2_2:49775349-49775368 | None:intergenic | 25.0% |
| ! | TAAAATTGCATCAAAATCCA+AGG | + | chr2_2:49775407-49775426 | None:intergenic | 25.0% |
| !! | CCTTTTCTTCATATATGAAA+TGG | + | chr2_2:49775435-49775454 | None:intergenic | 25.0% |
| ! | CCATTTCATATATGAAGAAA+AGG | - | chr2_2:49775432-49775451 | Msa0255620:three_prime_UTR | 25.0% |
| ! | GTATATGTGCATAGTTAATT+TGG | - | chr2_2:49775573-49775592 | Msa0255620:CDS | 25.0% |
| !!! | GATTGATTTTCAGATAGTTT+TGG | - | chr2_2:49775654-49775673 | Msa0255620:CDS | 25.0% |
| ! | TTTGTTTGATGAACTCTTAA+CGG | - | chr2_2:49775943-49775962 | Msa0255620:CDS | 25.0% |
| !! | TTTGAATATTGATGATATGC+AGG | - | chr2_2:49776017-49776036 | Msa0255620:CDS | 25.0% |
| ! | TTATAATCAGAAGGAAGAAA+CGG | - | chr2_2:49776091-49776110 | Msa0255620:intron | 25.0% |
| ! | AGATAAATCAAACCAAGAAA+AGG | - | chr2_2:49776119-49776138 | Msa0255620:intron | 25.0% |
| ! | CCTGAAAGAAAATCTAAATT+AGG | + | chr2_2:49776226-49776245 | None:intergenic | 25.0% |
| !! | CCTAATTTAGATTTTCTTTC+AGG | - | chr2_2:49776223-49776242 | Msa0255620:CDS | 25.0% |
| !!! | TTTTCTGTTTTAGTTGCATT+AGG | - | chr2_2:49776285-49776304 | Msa0255620:CDS | 25.0% |
| !!! | TTTCTGTTTTAGTTGCATTA+GGG | - | chr2_2:49776286-49776305 | Msa0255620:CDS | 25.0% |
| ! | ATTGTCATAATACACATTTC+TGG | - | chr2_2:49776381-49776400 | Msa0255620:intron | 25.0% |
| !! | TATGAGTTGACTAAAAAGTA+TGG | - | chr2_2:49776431-49776450 | Msa0255620:intron | 25.0% |
| !! | TATGAGTTGACTAAAAAGTA+TGG | - | chr2_2:49776431-49776450 | Msa0255620:intron | 25.0% |
| !! | AACGAAAAGTACAAATTTGA+AGG | - | chr2_2:49776575-49776594 | Msa0255620:intron | 25.0% |
| !! | ACGAAAAGTACAAATTTGAA+GGG | - | chr2_2:49776576-49776595 | Msa0255620:intron | 25.0% |
| ! | AAATGCATTTCGTTCATTTA+TGG | - | chr2_2:49776834-49776853 | Msa0255620:intron | 25.0% |
| ! | TGTGAAAATTGTAGTAGAAA+TGG | + | chr2_2:49776894-49776913 | None:intergenic | 25.0% |
| ! | TAAAAATCACGAAATGCATA+AGG | + | chr2_2:49776964-49776983 | None:intergenic | 25.0% |
| !! | TTATGCATTTCGTGATTTTT+AGG | - | chr2_2:49776963-49776982 | Msa0255620:intron | 25.0% |
| !! | AGATGAGCTTTTTAATCTTA+CGG | + | chr2_2:49777025-49777044 | None:intergenic | 25.0% |
| ! | TAGTTCAAAAAACCAAAGTT+AGG | + | chr2_2:49777048-49777067 | None:intergenic | 25.0% |
| !! | GCAAACTTAGTATTTTCATA+AGG | + | chr2_2:49777218-49777237 | None:intergenic | 25.0% |
| !! | GAATATTTTGTATTTCCTCA+AGG | - | chr2_2:49777576-49777595 | Msa0255620:intron | 25.0% |
| !!! | TTGATAATGACTTTAGAACA+TGG | - | chr2_2:49777610-49777629 | Msa0255620:intron | 25.0% |
| ! | AACTTAAAGCAATTATGTTC+AGG | - | chr2_2:49777680-49777699 | Msa0255620:CDS | 25.0% |
| ! | CTTTCAAACAGTTATAAAAG+AGG | + | chr2_2:49777778-49777797 | None:intergenic | 25.0% |
| ! | AAGTATAGAAAAACAGATGA+GGG | + | chr2_2:49777810-49777829 | None:intergenic | 25.0% |
| ! | TAAGTATAGAAAAACAGATG+AGG | + | chr2_2:49777811-49777830 | None:intergenic | 25.0% |
| !!! | TAATTAACTTGTTGTCAAGA+AGG | + | chr2_2:49777834-49777853 | None:intergenic | 25.0% |
| ! | CTTTCAAACAGTTATAAAAG+AGG | + | chr2_2:49777778-49777797 | None:intergenic | 25.0% |
| ! | AAGTATAGAAAAACAGATGA+GGG | + | chr2_2:49777810-49777829 | None:intergenic | 25.0% |
| ! | TAAGTATAGAAAAACAGATG+AGG | + | chr2_2:49777811-49777830 | None:intergenic | 25.0% |
| !!! | TAATTAACTTGTTGTCAAGA+AGG | + | chr2_2:49777834-49777853 | None:intergenic | 25.0% |
| !! | AATCGACATTTCTAAAGATA+GGG | + | chr2_2:49778048-49778067 | None:intergenic | 25.0% |
| !! | AAATCGACATTTCTAAAGAT+AGG | + | chr2_2:49778049-49778068 | None:intergenic | 25.0% |
| ! | AAGAACATTTCAACATCTAA+GGG | - | chr2_2:49778161-49778180 | Msa0255620:intron | 25.0% |
| ! | AAATTTGACTACTAATGTCA+AGG | - | chr2_2:49778644-49778663 | Msa0255620:intron | 25.0% |
| !! | TTAGTCAATGGTGATTTTAA+TGG | + | chr2_2:49778885-49778904 | None:intergenic | 25.0% |
| ! | GAAAGAAAAACAAAACATGA+GGG | - | chr2_2:49779003-49779022 | Msa0255620:intron | 25.0% |
| TTGTAGAGGATGATTAATGA+TGG | + | chr2_2:49775307-49775326 | None:intergenic | 30.0% | |
| TAATTAGGAGGATATACAAG+AGG | + | chr2_2:49775337-49775356 | None:intergenic | 30.0% | |
| ATGCAGTGTAATTCTATTTG+AGG | + | chr2_2:49775621-49775640 | None:intergenic | 30.0% | |
| AGAATTACACTGCATTAACT+TGG | - | chr2_2:49775626-49775645 | Msa0255620:CDS | 30.0% | |
| ! | GAAACAGCTATCTTATTTCA+AGG | + | chr2_2:49775680-49775699 | None:intergenic | 30.0% |
| !! | TTCATGTTCTTGCTATTAGA+AGG | - | chr2_2:49775697-49775716 | Msa0255620:CDS | 30.0% |
| TGATTTCAACTTTCAGTTTG+TGG | + | chr2_2:49775874-49775893 | None:intergenic | 30.0% | |
| ! | GAAAGGAAAAAACCTTTTCT+TGG | + | chr2_2:49776134-49776153 | None:intergenic | 30.0% |
| TTAGTTGACTAATGAGGATT+TGG | - | chr2_2:49776247-49776266 | Msa0255620:CDS | 30.0% | |
| TAGTTGACTAATGAGGATTT+GGG | - | chr2_2:49776248-49776267 | Msa0255620:CDS | 30.0% | |
| !! | GCATTAGGGTTTTAATATGT+TGG | - | chr2_2:49776300-49776319 | Msa0255620:CDS | 30.0% |
| ! | AAGTTTTTCACCACTACTTT+TGG | + | chr2_2:49776514-49776533 | None:intergenic | 30.0% |
| ! | TAGTGGTGAAAAACTTTTGA+GGG | - | chr2_2:49776518-49776537 | Msa0255620:intron | 30.0% |
| ! | AGACGAGTCATATATGTTTT+TGG | + | chr2_2:49776603-49776622 | None:intergenic | 30.0% |
| ! | AAGACATTTTTACCTTGCTT+TGG | - | chr2_2:49776633-49776652 | Msa0255620:intron | 30.0% |
| ! | TGTTACTTGATTCTTCATGA+GGG | + | chr2_2:49776738-49776757 | None:intergenic | 30.0% |
| TTTGTGTAAACTTGATCCAA+CGG | - | chr2_2:49777089-49777108 | Msa0255620:intron | 30.0% | |
| CATGATTCCTTAACTACATA+GGG | - | chr2_2:49777138-49777157 | Msa0255620:intron | 30.0% | |
| ! | TTTTCATAAGGGTTAAGCAT+AGG | + | chr2_2:49777206-49777225 | None:intergenic | 30.0% |
| ! | ATTTTTGCTTTAGTAGACGA+AGG | + | chr2_2:49777251-49777270 | None:intergenic | 30.0% |
| AACTAGACTATCACTAAAGA+AGG | + | chr2_2:49777524-49777543 | None:intergenic | 30.0% | |
| TCAAAGTAAATGATACCTTG+AGG | + | chr2_2:49777594-49777613 | None:intergenic | 30.0% | |
| AAAAAAAGTGAAGACACTAG+TGG | + | chr2_2:49777637-49777656 | None:intergenic | 30.0% | |
| ! | ATCGACATTTCTAAAGATAG+GGG | + | chr2_2:49778047-49778066 | None:intergenic | 30.0% |
| GAAGAACATTTCAACATCTA+AGG | - | chr2_2:49778160-49778179 | Msa0255620:intron | 30.0% | |
| AGAACATTTCAACATCTAAG+GGG | - | chr2_2:49778162-49778181 | Msa0255620:intron | 30.0% | |
| CACTTAACTACATACATTCA+TGG | - | chr2_2:49778244-49778263 | Msa0255620:intron | 30.0% | |
| GGAAAGTCAGTTAAAAATTG+AGG | - | chr2_2:49778341-49778360 | Msa0255620:intron | 30.0% | |
| TCAAGAAAGGATAAATCAAG+TGG | + | chr2_2:49778619-49778638 | None:intergenic | 30.0% | |
| GTGGTTCATCTTATCTAATT+TGG | + | chr2_2:49778847-49778866 | None:intergenic | 30.0% | |
| !! | ATGGAGATTTTGTTTCATTG+TGG | + | chr2_2:49778866-49778885 | None:intergenic | 30.0% |
| ! | TTAGCCAATGGTGATTTTAA+TGG | + | chr2_2:49778948-49778967 | None:intergenic | 30.0% |
| GGAAAGAAAAACAAAACATG+AGG | - | chr2_2:49779002-49779021 | Msa0255620:intron | 30.0% | |
| ! | TTGGTTTCTTCATCTTCTTT+TGG | - | chr2_2:49779064-49779083 | Msa0255620:intron | 30.0% |
| ! | TGGTTTCTTCATCTTCTTTT+GGG | - | chr2_2:49779065-49779084 | Msa0255620:intron | 30.0% |
| !! | TGGGGTTTATTTTCCATATT+TGG | - | chr2_2:49779084-49779103 | Msa0255620:intron | 30.0% |
| ACTATTATTCCCTTCATTTC+AGG | - | chr2_2:49779222-49779241 | Msa0255620:five_prime_UTR | 30.0% | |
| TGGATAGTAATGTTAAGACG+TGG | + | chr2_2:49775287-49775306 | None:intergenic | 35.0% | |
| CATATATGAAGAAAAGGGGT+TGG | - | chr2_2:49775438-49775457 | Msa0255620:three_prime_UTR | 35.0% | |
| ! | ACACTGCATTAACTTGGTTT+AGG | - | chr2_2:49775632-49775651 | Msa0255620:CDS | 35.0% |
| !! | TAGCTGTTTCTCAACAAGAA+TGG | - | chr2_2:49776047-49776066 | Msa0255620:intron | 35.0% |
| !! | AGCTGTTTCTCAACAAGAAT+GGG | - | chr2_2:49776048-49776067 | Msa0255620:intron | 35.0% |
| TTGCAAACATGATGAGAGTT+TGG | - | chr2_2:49776184-49776203 | Msa0255620:CDS | 35.0% | |
| !! | TCAGGATTAGTTGACTAATG+AGG | - | chr2_2:49776241-49776260 | Msa0255620:CDS | 35.0% |
| AAAGTATGGACCAAAAGTAG+TGG | - | chr2_2:49776501-49776520 | Msa0255620:intron | 35.0% | |
| ! | GTAGTGGTGAAAAACTTTTG+AGG | - | chr2_2:49776517-49776536 | Msa0255620:intron | 35.0% |
| AAGAGAACAAGAAACAACAC+TGG | + | chr2_2:49776664-49776683 | None:intergenic | 35.0% | |
| !! | GTGTTACTTGATTCTTCATG+AGG | + | chr2_2:49776739-49776758 | None:intergenic | 35.0% |
| TCCATCATCAAACCTTCATT+GGG | + | chr2_2:49776763-49776782 | None:intergenic | 35.0% | |
| ATATTGTGAATCAACCTGGA+AGG | + | chr2_2:49776796-49776815 | None:intergenic | 35.0% | |
| AGCAATATTGTGAATCAACC+TGG | + | chr2_2:49776800-49776819 | None:intergenic | 35.0% | |
| TTCACAATATTGCTGCTACT+CGG | - | chr2_2:49776806-49776825 | Msa0255620:intron | 35.0% | |
| AAAAGCTCATCTCCTAACTT+TGG | - | chr2_2:49777033-49777052 | Msa0255620:intron | 35.0% | |
| TTTGATGCAATCATACGATC+TGG | + | chr2_2:49777116-49777135 | None:intergenic | 35.0% | |
| CCTATGTAGTTAAGGAATCA+TGG | + | chr2_2:49777140-49777159 | None:intergenic | 35.0% | |
| CCATGATTCCTTAACTACAT+AGG | - | chr2_2:49777137-49777156 | Msa0255620:intron | 35.0% | |
| CTAGATTCCCTATGTAGTTA+AGG | + | chr2_2:49777148-49777167 | None:intergenic | 35.0% | |
| CTTAACTACATAGGGAATCT+AGG | - | chr2_2:49777146-49777165 | Msa0255620:intron | 35.0% | |
| !! | AGTTAGAAGGTACCACTTAA+AGG | + | chr2_2:49777281-49777300 | None:intergenic | 35.0% |
| TGATTGCAAGGAAAGTTAGA+AGG | + | chr2_2:49777294-49777313 | None:intergenic | 35.0% | |
| TTTCCTTGCAATCATAGACA+TGG | - | chr2_2:49777300-49777319 | Msa0255620:intron | 35.0% | |
| CAACTTAACAAAGTGACATG+AGG | - | chr2_2:49777356-49777375 | Msa0255620:intron | 35.0% | |
| ! | AGCTTTAATTCAAGACCACA+TGG | - | chr2_2:49778200-49778219 | Msa0255620:intron | 35.0% |
| ! | AGTTAAGTGTTGTTCCTGTT+TGG | + | chr2_2:49778233-49778252 | None:intergenic | 35.0% |
| ! | CAATCTCTTTTGCTTAATCC+TGG | + | chr2_2:49778322-49778341 | None:intergenic | 35.0% |
| CAGGATTAAGCAAAAGAGAT+TGG | - | chr2_2:49778320-49778339 | Msa0255620:intron | 35.0% | |
| ATGTCAAGGTAATATTGCAG+TGG | - | chr2_2:49778658-49778677 | Msa0255620:intron | 35.0% | |
| ! | CCAAAATACTGGTTACAGTT+TGG | + | chr2_2:49778687-49778706 | None:intergenic | 35.0% |
| ! | CCAAACTGTAACCAGTATTT+TGG | - | chr2_2:49778684-49778703 | Msa0255620:intron | 35.0% |
| !!! | GTTGAGTTTCTTTGTTTTGG+GGG | + | chr2_2:49778808-49778827 | None:intergenic | 35.0% |
| !!! | CGTTGAGTTTCTTTGTTTTG+GGG | + | chr2_2:49778809-49778828 | None:intergenic | 35.0% |
| !!! | CCGTTGAGTTTCTTTGTTTT+GGG | + | chr2_2:49778810-49778829 | None:intergenic | 35.0% |
| CCCAAAACAAAGAAACTCAA+CGG | - | chr2_2:49778807-49778826 | Msa0255620:five_prime_UTR | 35.0% | |
| ATCGCCATTAAAATCACCAT+TGG | - | chr2_2:49778941-49778960 | Msa0255620:intron | 35.0% | |
| ! | TTTTCTGCCTCAGCATTTTT+TGG | + | chr2_2:49779032-49779051 | None:intergenic | 35.0% |
| CAGAAAAATTGAATGGCTCT+TGG | - | chr2_2:49779045-49779064 | Msa0255620:intron | 35.0% | |
| ! | GGTTTCTTCATCTTCTTTTG+GGG | - | chr2_2:49779066-49779085 | Msa0255620:intron | 35.0% |
| AGATTCTCACAAGCCAAATA+TGG | + | chr2_2:49779100-49779119 | None:intergenic | 35.0% | |
| GCTTGTGAGAATCTATCATT+GGG | - | chr2_2:49779106-49779125 | Msa0255620:intron | 35.0% | |
| CTTTCGTTGAAACATGGTAA+TGG | - | chr2_2:49779196-49779215 | Msa0255620:five_prime_UTR | 35.0% | |
| CAAGAGGCTTACAATTGTAG+AGG | + | chr2_2:49775321-49775340 | None:intergenic | 40.0% | |
| ! | TTGCATCCTTGTTTCAGTTC+AGG | - | chr2_2:49775371-49775390 | Msa0255620:three_prime_UTR | 40.0% |
| CCAATACCTGAACTGAAACA+AGG | + | chr2_2:49775380-49775399 | None:intergenic | 40.0% | |
| ! | CCTTGTTTCAGTTCAGGTAT+TGG | - | chr2_2:49775377-49775396 | Msa0255620:three_prime_UTR | 40.0% |
| ! | CTATTAGAAGGTGCACTTGA+TGG | - | chr2_2:49775709-49775728 | Msa0255620:CDS | 40.0% |
| CAAGAATGGGTCCAAAGAAA+TGG | - | chr2_2:49776061-49776080 | Msa0255620:intron | 40.0% | |
| AGGACTGAAAAGAGAGAGAA+AGG | + | chr2_2:49776151-49776170 | None:intergenic | 40.0% | |
| TCTCTTAGCACTCTTTGAAC+AGG | - | chr2_2:49776678-49776697 | Msa0255620:intron | 40.0% | |
| AATCTACTGAACCCTCCAAT+GGG | - | chr2_2:49776704-49776723 | Msa0255620:intron | 40.0% | |
| TCAAGTAACACTCCCAATGA+AGG | - | chr2_2:49776748-49776767 | Msa0255620:intron | 40.0% | |
| TCCCAATGAAGGTTTGATGA+TGG | - | chr2_2:49776759-49776778 | Msa0255620:intron | 40.0% | |
| CTCCATCATCAAACCTTCAT+TGG | + | chr2_2:49776764-49776783 | None:intergenic | 40.0% | |
| !! | ATGAAGGTTTGATGATGGAG+AGG | - | chr2_2:49776764-49776783 | Msa0255620:intron | 40.0% |
| ! | TCATTGACTGCATGATTGGA+TGG | + | chr2_2:49776996-49777015 | None:intergenic | 40.0% |
| ! | CAGATCATTGACTGCATGAT+TGG | + | chr2_2:49777000-49777019 | None:intergenic | 40.0% |
| !! | ACAGCTCTCTGATTTTGGAA+GGG | - | chr2_2:49777704-49777723 | Msa0255620:CDS | 40.0% |
| TTGGAAGGGGAATTAAGTCA+TGG | - | chr2_2:49777718-49777737 | Msa0255620:CDS | 40.0% | |
| TGGAAGGGGAATTAAGTCAT+GGG | - | chr2_2:49777719-49777738 | Msa0255620:CDS | 40.0% | |
| TTGCCTGCATACATAGGTAT+GGG | + | chr2_2:49778140-49778159 | None:intergenic | 40.0% | |
| TTCTTCTTGCCTGCATACAT+AGG | + | chr2_2:49778146-49778165 | None:intergenic | 40.0% | |
| TAAGATTAATGAGCTCGAGG+TGG | - | chr2_2:49778365-49778384 | Msa0255620:intron | 40.0% | |
| ! | ACGTTTTGTGAATGTATCCC+AGG | - | chr2_2:49778466-49778485 | Msa0255620:CDS | 40.0% |
| ! | TTTTGTGAATGTATCCCAGG+TGG | - | chr2_2:49778469-49778488 | Msa0255620:CDS | 40.0% |
| CAATGGAAGAGATACTATCC+AGG | - | chr2_2:49778513-49778532 | Msa0255620:intron | 40.0% | |
| ! | ATGAGAGAAAGCATATGCCA+TGG | + | chr2_2:49778579-49778598 | None:intergenic | 40.0% |
| TCAAGGTAATATTGCAGTGG+AGG | - | chr2_2:49778661-49778680 | Msa0255620:intron | 40.0% | |
| !!! | CTGTAACCAGTATTTTGGTC+AGG | - | chr2_2:49778689-49778708 | Msa0255620:intron | 40.0% |
| AAGAAGCCTGACCAAAATAC+TGG | + | chr2_2:49778698-49778717 | None:intergenic | 40.0% | |
| ! | ATAGCCTTGGTAAAGAAAGC+TGG | - | chr2_2:49778718-49778737 | Msa0255620:intron | 40.0% |
| ! | TAGCCTTGGTAAAGAAAGCT+GGG | - | chr2_2:49778719-49778738 | Msa0255620:intron | 40.0% |
| !! | GCCGTTGAGTTTCTTTGTTT+TGG | + | chr2_2:49778811-49778830 | None:intergenic | 40.0% |
| ACTAAAGCTGCCATGTCAAA+TGG | - | chr2_2:49778900-49778919 | Msa0255620:intron | 40.0% | |
| CTAAAGCTGCCATGTCAAAT+GGG | - | chr2_2:49778901-49778920 | Msa0255620:intron | 40.0% | |
| GCTGAGGCAGAAAAATTGAA+TGG | - | chr2_2:49779038-49779057 | Msa0255620:intron | 40.0% | |
| GGCTTGTGAGAATCTATCAT+TGG | - | chr2_2:49779105-49779124 | Msa0255620:intron | 40.0% | |
| !! | TGCTAGCTTTCGTTGAAACA+TGG | - | chr2_2:49779190-49779209 | Msa0255620:five_prime_UTR | 40.0% |
| ATCACTGCTCCTGAAATGAA+GGG | + | chr2_2:49779234-49779253 | None:intergenic | 40.0% | |
| AATCACTGCTCCTGAAATGA+AGG | + | chr2_2:49779235-49779254 | None:intergenic | 40.0% | |
| !! | GTTCAGGTATTGGAACTCCT+TGG | - | chr2_2:49775387-49775406 | Msa0255620:three_prime_UTR | 45.0% |
| CAATCTACTGAACCCTCCAA+TGG | - | chr2_2:49776703-49776722 | Msa0255620:intron | 45.0% | |
| TTGATTCTTCATGAGGGCTG+TGG | + | chr2_2:49776732-49776751 | None:intergenic | 45.0% | |
| AATCATACGATCTGGACCGT+TGG | + | chr2_2:49777108-49777127 | None:intergenic | 45.0% | |
| CAGCCATGTCTATGATTGCA+AGG | + | chr2_2:49777306-49777325 | None:intergenic | 45.0% | |
| ! | CACAGCTCTCTGATTTTGGA+AGG | - | chr2_2:49777703-49777722 | Msa0255620:CDS | 45.0% |
| !! | CAGCTCTCTGATTTTGGAAG+GGG | - | chr2_2:49777705-49777724 | Msa0255620:CDS | 45.0% |
| TGCCTGCATACATAGGTATG+GGG | + | chr2_2:49778139-49778158 | None:intergenic | 45.0% | |
| CTTGCCTGCATACATAGGTA+TGG | + | chr2_2:49778141-49778160 | None:intergenic | 45.0% | |
| TGTTGTTCCTGTTTGGTCTC+TGG | + | chr2_2:49778226-49778245 | None:intergenic | 45.0% | |
| TGTGTATGATAACAGCAGCC+AGG | - | chr2_2:49778301-49778320 | Msa0255620:intron | 45.0% | |
| GGCTAAGATTAATGAGCTCG+AGG | - | chr2_2:49778362-49778381 | Msa0255620:intron | 45.0% | |
| TGAATGTATCCCAGGTGGAA+TGG | - | chr2_2:49778474-49778493 | Msa0255620:intron | 45.0% | |
| TTCTTCTCGCTGATGTATCC+TGG | + | chr2_2:49778534-49778553 | None:intergenic | 45.0% | |
| GGCATATGCTTTCTCTCATC+AGG | - | chr2_2:49778580-49778599 | Msa0255620:intron | 45.0% | |
| AGCCTTGGTAAAGAAAGCTG+GGG | - | chr2_2:49778720-49778739 | Msa0255620:intron | 45.0% | |
| AACCCCAGCTTTCTTTACCA+AGG | + | chr2_2:49778725-49778744 | None:intergenic | 45.0% | |
| TTGGTAAAGAAAGCTGGGGT+TGG | - | chr2_2:49778724-49778743 | Msa0255620:intron | 45.0% | |
| ! | CTAATTTGGTCTTCTGCTGC+TGG | + | chr2_2:49778833-49778852 | None:intergenic | 45.0% |
| ! | GACATGGCAGCTTTAGTCAA+TGG | + | chr2_2:49778897-49778916 | None:intergenic | 45.0% |
| ACTCTCCTTCCCATTTGACA+TGG | + | chr2_2:49778913-49778932 | None:intergenic | 45.0% | |
| AGTCTCCTTCGCATTTGACA+CGG | + | chr2_2:49778976-49778995 | None:intergenic | 45.0% | |
| AATGCGAAGGAGACTGAGAA+AGG | - | chr2_2:49778981-49779000 | Msa0255620:intron | 45.0% | |
| !!! | TTTAAAAGATTATAATATTT+TGG | - | chr2_2:49776352-49776371 | Msa0255620:CDS | 5.0% |
| !!! | TTAAAAGATTATAATATTTT+GGG | - | chr2_2:49776353-49776372 | Msa0255620:CDS | 5.0% |
| !! | TAATATACAAAAATAAAAAA+TGG | - | chr2_2:49777066-49777085 | Msa0255620:intron | 5.0% |
| ACACTGGATGTGCCAAAGCA+AGG | + | chr2_2:49776648-49776667 | None:intergenic | 50.0% | |
| ! | CAGGCACAGCTCTCTGATTT+TGG | - | chr2_2:49777699-49777718 | Msa0255620:CDS | 50.0% |
| GCCTGCATACATAGGTATGG+GGG | + | chr2_2:49778138-49778157 | None:intergenic | 50.0% | |
| !! | GTGCAGCGGTTCTGAAACAA+TGG | - | chr2_2:49778496-49778515 | Msa0255620:intron | 50.0% |
| AATCAAACGAGAGCGAGCCA+TGG | - | chr2_2:49778559-49778578 | Msa0255620:intron | 50.0% | |
| GGTCAGGCTTCTTATAGCCT+TGG | - | chr2_2:49778705-49778724 | Msa0255620:intron | 50.0% | |
| AGCTGCCATGTCAAATGGGA+AGG | - | chr2_2:49778905-49778924 | Msa0255620:intron | 50.0% | |
| ! | GACACGGAAGCTTTAGCCAA+TGG | + | chr2_2:49778960-49778979 | None:intergenic | 50.0% |
| AGCTTCCGTGTCAAATGCGA+AGG | - | chr2_2:49778968-49778987 | Msa0255620:intron | 50.0% | |
| AGGGCTGCCAAAAAATGCTG+AGG | - | chr2_2:49779022-49779041 | Msa0255620:intron | 50.0% | |
| ATGAGGGCTGTGGTTCCCAT+TGG | + | chr2_2:49776722-49776741 | None:intergenic | 55.0% | |
| TGGAGAGGACAGTTCCTTCC+AGG | - | chr2_2:49776779-49776798 | Msa0255620:intron | 55.0% | |
| GCCCCCATACCTATGTATGC+AGG | - | chr2_2:49778134-49778153 | Msa0255620:intron | 55.0% | |
| CTGTTTGGTCTCTGGCCATG+TGG | + | chr2_2:49778218-49778237 | None:intergenic | 55.0% | |
| CACATGGCCAGAGACCAAAC+AGG | - | chr2_2:49778216-49778235 | Msa0255620:intron | 55.0% | |
| AAGAAAGCTGGGGTTGGAGC+TGG | - | chr2_2:49778730-49778749 | Msa0255620:intron | 55.0% | |
| ! | TTGGAGCTGGATGGAGCGTT+GGG | - | chr2_2:49778743-49778762 | Msa0255620:intron | 55.0% |
| ACTTGAACCCGAACCTCCCA+AGG | + | chr2_2:49778780-49778799 | None:intergenic | 55.0% | |
| GGGCTGTGGTTCCCATTGGA+GGG | + | chr2_2:49776718-49776737 | None:intergenic | 60.0% | |
| AGGGCTGTGGTTCCCATTGG+AGG | + | chr2_2:49776719-49776738 | None:intergenic | 60.0% | |
| TCCCAGGTGGAATGGTGCAG+CGG | - | chr2_2:49778482-49778501 | Msa0255620:intron | 60.0% | |
| ACCGCTGCACCATTCCACCT+GGG | + | chr2_2:49778486-49778505 | None:intergenic | 60.0% | |
| AACCGCTGCACCATTCCACC+TGG | + | chr2_2:49778487-49778506 | None:intergenic | 60.0% | |
| AAGCTGGGGTTGGAGCTGGA+TGG | - | chr2_2:49778734-49778753 | Msa0255620:intron | 60.0% | |
| GTTGGAGCTGGATGGAGCGT+TGG | - | chr2_2:49778742-49778761 | Msa0255620:intron | 60.0% | |
| ! | TTGGGTTGCAGCGCGTCCTT+GGG | - | chr2_2:49778761-49778780 | Msa0255620:intron | 60.0% |
| ! | GTTGGGTTGCAGCGCGTCCT+TGG | - | chr2_2:49778760-49778779 | Msa0255620:intron | 65.0% |
| CAGCGCGTCCTTGGGAGGTT+CGG | - | chr2_2:49778769-49778788 | Msa0255620:intron | 65.0% | |
| AGCGCGTCCTTGGGAGGTTC+GGG | - | chr2_2:49778770-49778789 | Msa0255620:intron | 65.0% | |
| GGTTGCAGCGCGTCCTTGGG+AGG | - | chr2_2:49778764-49778783 | Msa0255620:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 49775227 | 49779302 | 49775227 | ID=Msa0255620;Name=Msa0255620 |
| chr2_2 | mRNA | 49775227 | 49779302 | 49775227 | ID=Msa0255620-mRNA-1;Parent=Msa0255620;Name=Msa0255620-mRNA-1;_AED=0.07;_eAED=0.07;_QI=240|0.83|0.85|1|0.66|0.71|7|280|316 |
| chr2_2 | exon | 49775227 | 49775851 | 49775227 | ID=Msa0255620-mRNA-1:exon:14987;Parent=Msa0255620-mRNA-1 |
| chr2_2 | exon | 49775928 | 49776041 | 49775928 | ID=Msa0255620-mRNA-1:exon:14986;Parent=Msa0255620-mRNA-1 |
| chr2_2 | exon | 49776143 | 49776373 | 49776143 | ID=Msa0255620-mRNA-1:exon:14985;Parent=Msa0255620-mRNA-1 |
| chr2_2 | exon | 49777674 | 49777829 | 49777674 | ID=Msa0255620-mRNA-1:exon:14984;Parent=Msa0255620-mRNA-1 |
| chr2_2 | exon | 49778389 | 49778490 | 49778389 | ID=Msa0255620-mRNA-1:exon:14983;Parent=Msa0255620-mRNA-1 |
| chr2_2 | exon | 49778799 | 49778875 | 49778799 | ID=Msa0255620-mRNA-1:exon:14982;Parent=Msa0255620-mRNA-1 |
| chr2_2 | exon | 49779137 | 49779302 | 49779137 | ID=Msa0255620-mRNA-1:exon:14981;Parent=Msa0255620-mRNA-1 |
| chr2_2 | five_prime_UTR | 49779137 | 49779302 | 49779137 | ID=Msa0255620-mRNA-1:five_prime_utr;Parent=Msa0255620-mRNA-1 |
| chr2_2 | five_prime_UTR | 49778802 | 49778875 | 49778802 | ID=Msa0255620-mRNA-1:five_prime_utr;Parent=Msa0255620-mRNA-1 |
| chr2_2 | CDS | 49778799 | 49778801 | 49778799 | ID=Msa0255620-mRNA-1:cds;Parent=Msa0255620-mRNA-1 |
| chr2_2 | CDS | 49778389 | 49778490 | 49778389 | ID=Msa0255620-mRNA-1:cds;Parent=Msa0255620-mRNA-1 |
| chr2_2 | CDS | 49777674 | 49777829 | 49777674 | ID=Msa0255620-mRNA-1:cds;Parent=Msa0255620-mRNA-1 |
| chr2_2 | CDS | 49776143 | 49776373 | 49776143 | ID=Msa0255620-mRNA-1:cds;Parent=Msa0255620-mRNA-1 |
| chr2_2 | CDS | 49775928 | 49776041 | 49775928 | ID=Msa0255620-mRNA-1:cds;Parent=Msa0255620-mRNA-1 |
| chr2_2 | CDS | 49775507 | 49775851 | 49775507 | ID=Msa0255620-mRNA-1:cds;Parent=Msa0255620-mRNA-1 |
| chr2_2 | three_prime_UTR | 49775227 | 49775506 | 49775227 | ID=Msa0255620-mRNA-1:three_prime_utr;Parent=Msa0255620-mRNA-1 |
| Gene Sequence |
| Protein sequence |
