Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1436420 | XP_003594882.2 | 99.042 | 1044 | 10 | 0 | 1 | 1044 | 1 | 1044 | 0.0 | 2157 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1436420 | sp|Q84JA6|CESA4_ARATH | 76.974 | 1064 | 210 | 8 | 1 | 1044 | 1 | 1049 | 0.0 | 1666 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1436420 | G7INF0 | 99.042 | 1044 | 10 | 0 | 1 | 1044 | 1 | 1044 | 0.0 | 2157 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0018060 | Msa1436420 | 0.807112 | 5.926991e-50 | -8.615850e-47 |
| Msa0040660 | Msa1436420 | 0.845433 | 4.073085e-59 | -8.615850e-47 |
| Msa0108160 | Msa1436420 | 0.804613 | 1.986483e-49 | -8.615850e-47 |
| Msa1426070 | Msa1436420 | 0.861326 | 1.109950e-63 | -8.615850e-47 |
| Msa1430750 | Msa1436420 | 0.927084 | 1.923013e-91 | -8.615850e-47 |
| Msa1433810 | Msa1436420 | 0.809044 | 2.298386e-50 | -8.615850e-47 |
| Msa1436420 | Msa1444190 | 0.818247 | 2.165970e-52 | -8.615850e-47 |
| Msa1436420 | Msa1445050 | 0.828004 | 1.144163e-54 | -8.615850e-47 |
| Msa1436420 | Msa1446110 | 0.843657 | 1.224480e-58 | -8.615850e-47 |
| Msa0629600 | Msa1436420 | 0.884373 | 2.027185e-71 | -8.615850e-47 |
| Msa0642950 | Msa1436420 | 0.864867 | 8.924055e-65 | -8.615850e-47 |
| Msa0667370 | Msa1436420 | 0.888260 | 6.914920e-73 | -8.615850e-47 |
| Msa0688820 | Msa1436420 | 0.835904 | 1.278763e-56 | -8.615850e-47 |
| Msa0783980 | Msa1436420 | 0.865490 | 5.686842e-65 | -8.615850e-47 |
| Msa0818710 | Msa1436420 | 0.810515 | 1.109518e-50 | -8.615850e-47 |
| Msa0186920 | Msa1436420 | 0.808427 | 3.114542e-50 | -8.615850e-47 |
| Msa0193730 | Msa1436420 | 0.802426 | 5.641583e-49 | -8.615850e-47 |
| Msa0193850 | Msa1436420 | 0.878148 | 3.551082e-69 | -8.615850e-47 |
| Msa0199960 | Msa1436420 | 0.913654 | 4.787881e-84 | -8.615850e-47 |
| Msa0227950 | Msa1436420 | 0.832282 | 1.033417e-55 | -8.615850e-47 |
| Msa0228250 | Msa1436420 | 0.802683 | 4.994065e-49 | -8.615850e-47 |
| Msa0235710 | Msa1436420 | 0.867843 | 1.015122e-65 | -8.615850e-47 |
| Msa1227990 | Msa1436420 | 0.810459 | 1.140933e-50 | -8.615850e-47 |
| Msa1264570 | Msa1436420 | 0.860198 | 2.441681e-63 | -8.615850e-47 |
| Msa1327650 | Msa1436420 | 0.833283 | 5.828749e-56 | -8.615850e-47 |
| Msa1336610 | Msa1436420 | 0.808846 | 2.534246e-50 | -8.615850e-47 |
| Msa1340700 | Msa1436420 | 0.925662 | 1.354184e-90 | -8.615850e-47 |
| Msa1343400 | Msa1436420 | 0.813624 | 2.329129e-51 | -8.615850e-47 |
| Msa0365530 | Msa1436420 | 0.812001 | 5.280754e-51 | -8.615850e-47 |
| Msa0373310 | Msa1436420 | 0.801776 | 7.674857e-49 | -8.615850e-47 |
| Msa0389500 | Msa1436420 | 0.826590 | 2.495044e-54 | -8.615850e-47 |
| Msa0392380 | Msa1436420 | 0.846712 | 1.828778e-59 | -8.615850e-47 |
| Msa0438010 | Msa1436420 | 0.804250 | 2.363838e-49 | -8.615850e-47 |
| Msa0440320 | Msa1436420 | 0.845622 | 3.621333e-59 | -8.615850e-47 |
| Msa0475290 | Msa1436420 | 0.830912 | 2.248371e-55 | -8.615850e-47 |
| Msa1037550 | Msa1436420 | 0.858506 | 7.860465e-63 | -8.615850e-47 |
| Msa1078930 | Msa1436420 | 0.854028 | 1.616151e-61 | -8.615850e-47 |
| Msa1106500 | Msa1436420 | 0.846982 | 1.542764e-59 | -8.615850e-47 |
| Msa0242490 | Msa1436420 | 0.891363 | 4.254070e-74 | -8.615850e-47 |
| Msa0243600 | Msa1436420 | 0.974286 | 6.886025e-138 | -8.615850e-47 |
| Msa0255620 | Msa1436420 | 0.805250 | 1.461632e-49 | -8.615850e-47 |
| Msa0274440 | Msa1436420 | 0.890552 | 8.890237e-74 | -8.615850e-47 |
| Msa0280690 | Msa1436420 | 0.882460 | 1.023050e-70 | -8.615850e-47 |
| Msa0282220 | Msa1436420 | 0.991479 | 7.270160e-188 | -8.615850e-47 |
| Msa0294720 | Msa1436420 | 0.808383 | 3.182629e-50 | -8.615850e-47 |
| Msa0300210 | Msa1436420 | 0.817694 | 2.886909e-52 | -8.615850e-47 |
| Msa0314090 | Msa1436420 | 0.802116 | 6.536706e-49 | -8.615850e-47 |
| Msa0314170 | Msa1436420 | 0.909764 | 3.970644e-82 | -8.615850e-47 |
| Msa0319940 | Msa1436420 | 0.866326 | 3.094541e-65 | -8.615850e-47 |
| Msa0333070 | Msa1436420 | 0.834447 | 2.981386e-56 | -8.615850e-47 |
| Msa1123930 | Msa1436420 | 0.864434 | 1.219635e-64 | -8.615850e-47 |
| Msa1130430 | Msa1436420 | 0.845372 | 4.230727e-59 | -8.615850e-47 |
| Msa1169230 | Msa1436420 | 0.839987 | 1.140348e-57 | -8.615850e-47 |
| Msa1222590 | Msa1436420 | 0.929666 | 5.010513e-93 | -8.615850e-47 |
| Msa0487500 | Msa1436420 | 0.845195 | 4.725994e-59 | -8.615850e-47 |
| Msa0546800 | Msa1436420 | 0.837608 | 4.700941e-57 | -8.615850e-47 |
| Msa0547110 | Msa1436420 | 0.820119 | 8.114756e-53 | -8.615850e-47 |
| Msa0557460 | Msa1436420 | 0.803890 | 2.808918e-49 | -8.615850e-47 |
| Msa0589690 | Msa1436420 | 0.822574 | 2.202733e-53 | -8.615850e-47 |
| Msa0945200 | Msa1436420 | 0.812082 | 5.069119e-51 | -8.615850e-47 |
| Msa0968350 | Msa1436420 | 0.857179 | 1.946601e-62 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1436420 | MtrunA17_Chr2g0296991 | 99.042 | 1044 | 10 | 0 | 1 | 1044 | 1 | 1044 | 0.0 | 2157 |
| Msa1436420 | MtrunA17_Chr3g0088821 | 63.745 | 1084 | 309 | 9 | 28 | 1044 | 12 | 1078 | 0.0 | 1414 |
| Msa1436420 | MtrunA17_Chr4g0073711 | 64.991 | 1074 | 300 | 12 | 7 | 1044 | 5 | 1038 | 0.0 | 1406 |
| Msa1436420 | MtrunA17_Chr1g0201731 | 61.815 | 1113 | 337 | 13 | 1 | 1044 | 3 | 1096 | 0.0 | 1389 |
| Msa1436420 | MtrunA17_Chr8g0352231 | 63.192 | 1084 | 315 | 9 | 28 | 1044 | 12 | 1078 | 0.0 | 1385 |
| Msa1436420 | MtrunA17_Chr1g0183381 | 71.690 | 929 | 201 | 8 | 119 | 1044 | 35 | 904 | 0.0 | 1365 |
| Msa1436420 | MtrunA17_Chr2g0284211 | 65.260 | 1019 | 295 | 13 | 31 | 1039 | 3 | 972 | 0.0 | 1342 |
| Msa1436420 | MtrunA17_Chr8g0383701 | 69.653 | 893 | 246 | 4 | 161 | 1044 | 219 | 1095 | 0.0 | 1335 |
| Msa1436420 | MtrunA17_Chr8g0383701 | 53.125 | 96 | 41 | 1 | 4 | 95 | 2 | 97 | 4.10e-23 | 106 |
| Msa1436420 | MtrunA17_Chr8g0379241 | 63.178 | 1032 | 317 | 12 | 32 | 1044 | 4 | 991 | 0.0 | 1324 |
| Msa1436420 | MtrunA17_Chr3g0137951 | 69.299 | 899 | 237 | 11 | 163 | 1044 | 211 | 1087 | 0.0 | 1296 |
| Msa1436420 | MtrunA17_Chr3g0137951 | 44.086 | 93 | 47 | 1 | 7 | 94 | 5 | 97 | 3.38e-22 | 103 |
| Msa1436420 | MtrunA17_Chr3g0078671 | 57.934 | 1065 | 405 | 8 | 5 | 1044 | 3 | 1049 | 0.0 | 1258 |
| Msa1436420 | MtrunA17_Chr7g0267731 | 65.028 | 895 | 280 | 6 | 163 | 1044 | 112 | 986 | 0.0 | 1204 |
| Msa1436420 | MtrunA17_Chr8g0364641 | 54.771 | 1048 | 393 | 14 | 7 | 1044 | 5 | 981 | 0.0 | 1175 |
| Msa1436420 | MtrunA17_Chr4g0039801 | 47.883 | 921 | 354 | 17 | 187 | 1027 | 254 | 1128 | 0.0 | 841 |
| Msa1436420 | MtrunA17_Chr5g0410641 | 42.134 | 1087 | 477 | 21 | 23 | 1027 | 91 | 1107 | 0.0 | 836 |
| Msa1436420 | MtrunA17_Chr1g0165411 | 42.444 | 1072 | 464 | 27 | 27 | 1033 | 110 | 1093 | 0.0 | 802 |
| Msa1436420 | MtrunA17_Chr1g0165421 | 42.222 | 1080 | 479 | 25 | 20 | 1027 | 111 | 1117 | 0.0 | 800 |
| Msa1436420 | MtrunA17_Chr7g0269741 | 46.703 | 910 | 355 | 15 | 202 | 1027 | 293 | 1156 | 0.0 | 798 |
| Msa1436420 | MtrunA17_Chr2g0297351 | 45.788 | 926 | 368 | 18 | 186 | 1027 | 135 | 1010 | 0.0 | 785 |
| Msa1436420 | MtrunA17_Chr7g0274751 | 41.348 | 890 | 305 | 21 | 187 | 1027 | 77 | 798 | 0.0 | 608 |
| Msa1436420 | MtrunA17_Chr4g0025201 | 32.982 | 758 | 402 | 14 | 251 | 997 | 49 | 711 | 1.68e-118 | 381 |
| Msa1436420 | MtrunA17_Chr2g0322361 | 31.760 | 784 | 424 | 20 | 251 | 1018 | 52 | 740 | 7.25e-109 | 356 |
| Msa1436420 | MtrunA17_Chr2g0322341 | 44.590 | 305 | 156 | 4 | 252 | 556 | 52 | 343 | 4.02e-81 | 268 |
| Msa1436420 | MtrunA17_Chr2g0322371 | 43.314 | 344 | 175 | 6 | 251 | 593 | 47 | 371 | 3.99e-80 | 277 |
| Msa1436420 | MtrunA17_Chr2g0322371 | 29.008 | 393 | 251 | 10 | 644 | 1024 | 356 | 732 | 6.80e-40 | 159 |
| Msa1436420 | MtrunA17_Chr3g0102541 | 40.171 | 351 | 196 | 6 | 243 | 590 | 44 | 383 | 1.79e-79 | 275 |
| Msa1436420 | MtrunA17_Chr3g0102541 | 35.714 | 224 | 137 | 3 | 708 | 928 | 409 | 628 | 4.59e-36 | 147 |
| Msa1436420 | MtrunA17_Chr3g0102531 | 38.503 | 374 | 214 | 8 | 221 | 590 | 21 | 382 | 2.93e-79 | 275 |
| Msa1436420 | MtrunA17_Chr3g0102531 | 36.161 | 224 | 136 | 3 | 708 | 928 | 408 | 627 | 6.62e-36 | 146 |
| Msa1436420 | MtrunA17_Chr3g0102551 | 37.240 | 384 | 214 | 9 | 221 | 590 | 23 | 393 | 2.91e-78 | 272 |
| Msa1436420 | MtrunA17_Chr3g0102551 | 31.596 | 307 | 192 | 9 | 722 | 1015 | 428 | 729 | 1.14e-35 | 145 |
| Msa1436420 | MtrunA17_Chr1g0186381 | 37.000 | 400 | 219 | 8 | 200 | 590 | 4 | 379 | 1.80e-73 | 258 |
| Msa1436420 | MtrunA17_Chr1g0186381 | 26.124 | 356 | 238 | 8 | 683 | 1021 | 390 | 737 | 8.34e-36 | 146 |
| Msa1436420 | MtrunA17_Chr2g0322351 | 41.226 | 359 | 189 | 8 | 238 | 593 | 37 | 376 | 2.08e-72 | 255 |
| Msa1436420 | MtrunA17_Chr2g0322351 | 31.871 | 342 | 217 | 8 | 684 | 1018 | 395 | 727 | 6.25e-44 | 171 |
| Msa1436420 | MtrunA17_Chr4g0046401 | 36.702 | 376 | 211 | 8 | 222 | 590 | 24 | 379 | 4.66e-71 | 251 |
| Msa1436420 | MtrunA17_Chr4g0046401 | 31.899 | 395 | 251 | 10 | 631 | 1018 | 347 | 730 | 4.74e-45 | 174 |
| Msa1436420 | MtrunA17_Chr3g0095791 | 34.865 | 370 | 204 | 7 | 221 | 588 | 18 | 352 | 2.15e-67 | 240 |
| Msa1436420 | MtrunA17_Chr3g0095791 | 27.829 | 327 | 225 | 5 | 684 | 1003 | 368 | 690 | 1.43e-35 | 145 |
| Msa1436420 | MtrunA17_Chr2g0307191 | 33.598 | 378 | 207 | 7 | 222 | 593 | 19 | 358 | 1.24e-63 | 229 |
| Msa1436420 | MtrunA17_Chr2g0307191 | 26.300 | 327 | 224 | 6 | 687 | 1003 | 372 | 691 | 2.37e-32 | 135 |
| Msa1436420 | MtrunA17_Chr2g0298581 | 34.409 | 372 | 212 | 7 | 222 | 593 | 19 | 358 | 1.76e-63 | 229 |
| Msa1436420 | MtrunA17_Chr2g0298581 | 28.221 | 326 | 223 | 5 | 684 | 1002 | 369 | 690 | 1.27e-35 | 145 |
| Msa1436420 | MtrunA17_Chr3g0077511 | 33.515 | 367 | 212 | 5 | 222 | 588 | 19 | 353 | 1.52e-62 | 226 |
| Msa1436420 | MtrunA17_Chr3g0077511 | 26.190 | 336 | 232 | 8 | 677 | 1003 | 365 | 693 | 2.44e-32 | 135 |
| Msa1436420 | MtrunA17_Chr2g0322331 | 31.165 | 369 | 239 | 7 | 660 | 1018 | 8 | 371 | 9.73e-51 | 184 |
| Msa1436420 | MtrunA17_Chr0c03g0490021 | 68.033 | 122 | 38 | 1 | 875 | 995 | 1 | 122 | 2.57e-47 | 165 |
| Msa1436420 | MtrunA17_Chr3g0126641 | 39.592 | 245 | 88 | 8 | 532 | 756 | 6 | 210 | 9.07e-42 | 152 |
| Msa1436420 | MtrunA17_Chr7g0252781 | 64.706 | 85 | 27 | 2 | 962 | 1044 | 6 | 89 | 9.72e-31 | 116 |
| Msa1436420 | MtrunA17_Chr8g0355061 | 81.481 | 54 | 10 | 0 | 875 | 928 | 1 | 54 | 1.18e-26 | 103 |
| Msa1436420 | MtrunA17_Chr2g0307241 | 35.000 | 160 | 95 | 3 | 222 | 381 | 19 | 169 | 1.49e-26 | 108 |
| Msa1436420 | MtrunA17_Chr3g0094861 | 46.392 | 97 | 47 | 1 | 6 | 97 | 1 | 97 | 9.53e-23 | 100 |
| Msa1436420 | MtrunA17_Chr7g0267741 | 59.322 | 59 | 24 | 0 | 33 | 91 | 5 | 63 | 2.00e-22 | 91.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1436420 | AT5G44030.1 | 76.974 | 1064 | 210 | 8 | 1 | 1044 | 1 | 1049 | 0.0 | 1666 |
| Msa1436420 | AT5G44030.2 | 75.297 | 1093 | 206 | 9 | 1 | 1044 | 1 | 1078 | 0.0 | 1658 |
| Msa1436420 | AT5G05170.1 | 64.958 | 1073 | 302 | 11 | 28 | 1044 | 11 | 1065 | 0.0 | 1425 |
| Msa1436420 | AT5G09870.1 | 62.615 | 1086 | 342 | 8 | 4 | 1044 | 2 | 1068 | 0.0 | 1413 |
| Msa1436420 | AT5G17420.1 | 65.449 | 1068 | 293 | 14 | 7 | 1044 | 5 | 1026 | 0.0 | 1407 |
| Msa1436420 | AT5G64740.1 | 61.931 | 1098 | 345 | 11 | 4 | 1044 | 2 | 1083 | 0.0 | 1401 |
| Msa1436420 | AT2G21770.1 | 61.741 | 1103 | 342 | 12 | 4 | 1044 | 2 | 1086 | 0.0 | 1397 |
| Msa1436420 | AT4G32410.1 | 62.187 | 1079 | 334 | 12 | 7 | 1029 | 5 | 1065 | 0.0 | 1382 |
| Msa1436420 | AT4G39350.1 | 61.601 | 1099 | 346 | 13 | 4 | 1044 | 2 | 1082 | 0.0 | 1358 |
| Msa1436420 | AT2G25540.1 | 61.905 | 1050 | 341 | 12 | 19 | 1029 | 16 | 1045 | 0.0 | 1353 |
| Msa1436420 | AT4G18780.1 | 65.396 | 1023 | 277 | 13 | 31 | 1031 | 3 | 970 | 0.0 | 1345 |
| Msa1436420 | AT5G44030.3 | 82.987 | 770 | 119 | 2 | 287 | 1044 | 1 | 770 | 0.0 | 1330 |
| Msa1436420 | AT5G16910.1 | 43.853 | 1090 | 499 | 25 | 3 | 1027 | 90 | 1131 | 0.0 | 843 |
| Msa1436420 | AT3G03050.1 | 43.663 | 1081 | 452 | 24 | 30 | 1027 | 125 | 1131 | 0.0 | 842 |
| Msa1436420 | AT1G02730.1 | 46.732 | 918 | 360 | 18 | 202 | 1032 | 298 | 1173 | 0.0 | 796 |
| Msa1436420 | AT2G33100.2 | 46.718 | 914 | 383 | 17 | 184 | 1027 | 145 | 1024 | 0.0 | 794 |
| Msa1436420 | AT2G33100.1 | 46.718 | 914 | 383 | 17 | 184 | 1027 | 145 | 1024 | 0.0 | 794 |
| Msa1436420 | AT1G32180.1 | 47.201 | 911 | 364 | 17 | 194 | 1025 | 94 | 966 | 0.0 | 791 |
| Msa1436420 | AT1G32180.2 | 47.201 | 911 | 364 | 17 | 194 | 1025 | 94 | 966 | 0.0 | 791 |
| Msa1436420 | AT4G38190.1 | 43.546 | 643 | 259 | 18 | 20 | 598 | 99 | 701 | 4.51e-151 | 479 |
| Msa1436420 | AT4G38190.1 | 50.459 | 327 | 157 | 3 | 704 | 1027 | 768 | 1092 | 1.93e-107 | 361 |
| Msa1436420 | AT1G55850.1 | 38.571 | 420 | 218 | 9 | 182 | 590 | 1 | 391 | 1.40e-79 | 276 |
| Msa1436420 | AT1G55850.1 | 31.392 | 309 | 188 | 7 | 722 | 1015 | 420 | 719 | 5.99e-37 | 150 |
| Msa1436420 | AT2G32530.1 | 40.701 | 371 | 192 | 9 | 226 | 590 | 24 | 372 | 4.36e-77 | 269 |
| Msa1436420 | AT2G32530.1 | 28.732 | 355 | 217 | 6 | 670 | 999 | 385 | 728 | 6.97e-35 | 144 |
| Msa1436420 | AT4G15320.3 | 41.129 | 372 | 194 | 8 | 222 | 590 | 23 | 372 | 5.78e-77 | 269 |
| Msa1436420 | AT4G15320.3 | 27.628 | 409 | 245 | 12 | 626 | 996 | 334 | 729 | 1.34e-29 | 127 |
| Msa1436420 | AT4G15320.5 | 41.129 | 372 | 194 | 8 | 222 | 590 | 23 | 372 | 7.80e-77 | 268 |
| Msa1436420 | AT4G15320.5 | 27.628 | 409 | 245 | 12 | 626 | 996 | 334 | 729 | 1.43e-29 | 127 |
| Msa1436420 | AT4G15320.2 | 29.654 | 752 | 418 | 22 | 206 | 932 | 10 | 675 | 8.89e-77 | 269 |
| Msa1436420 | AT2G32620.2 | 41.787 | 347 | 178 | 7 | 250 | 593 | 50 | 375 | 1.43e-75 | 259 |
| Msa1436420 | AT2G32620.2 | 35.484 | 124 | 79 | 1 | 677 | 799 | 392 | 515 | 1.09e-17 | 88.2 |
| Msa1436420 | AT2G32540.1 | 40.936 | 342 | 182 | 6 | 250 | 590 | 50 | 372 | 9.53e-75 | 263 |
| Msa1436420 | AT2G32540.1 | 26.757 | 370 | 238 | 7 | 678 | 1023 | 393 | 753 | 5.44e-35 | 144 |
| Msa1436420 | AT2G32620.3 | 41.787 | 347 | 178 | 7 | 250 | 593 | 50 | 375 | 1.24e-74 | 259 |
| Msa1436420 | AT2G32620.3 | 33.333 | 216 | 128 | 5 | 677 | 885 | 392 | 598 | 6.36e-27 | 117 |
| Msa1436420 | AT4G15320.4 | 40.420 | 381 | 199 | 9 | 222 | 590 | 23 | 387 | 1.65e-74 | 262 |
| Msa1436420 | AT4G15320.4 | 27.628 | 409 | 245 | 12 | 626 | 996 | 349 | 744 | 1.91e-29 | 126 |
| Msa1436420 | AT4G24010.1 | 36.500 | 400 | 223 | 9 | 220 | 605 | 25 | 407 | 1.73e-73 | 259 |
| Msa1436420 | AT4G24010.1 | 32.542 | 295 | 187 | 5 | 714 | 1001 | 415 | 704 | 3.64e-41 | 163 |
| Msa1436420 | AT2G32620.1 | 41.787 | 347 | 178 | 7 | 250 | 593 | 50 | 375 | 1.98e-73 | 259 |
| Msa1436420 | AT2G32620.1 | 30.659 | 349 | 206 | 8 | 677 | 999 | 392 | 730 | 3.39e-35 | 144 |
| Msa1436420 | AT2G32610.1 | 39.459 | 370 | 199 | 8 | 229 | 593 | 27 | 376 | 4.72e-73 | 258 |
| Msa1436420 | AT2G32610.1 | 30.214 | 374 | 225 | 10 | 677 | 1023 | 393 | 757 | 1.44e-35 | 145 |
| Msa1436420 | AT4G15290.1 | 41.570 | 344 | 177 | 7 | 250 | 590 | 50 | 372 | 1.55e-72 | 256 |
| Msa1436420 | AT4G15290.1 | 28.409 | 352 | 220 | 9 | 670 | 997 | 385 | 728 | 7.95e-29 | 124 |
| Msa1436420 | AT4G23990.1 | 38.056 | 360 | 195 | 7 | 258 | 605 | 83 | 426 | 1.58e-71 | 253 |
| Msa1436420 | AT4G23990.1 | 32.203 | 295 | 189 | 4 | 709 | 997 | 430 | 719 | 4.86e-42 | 166 |
| Msa1436420 | AT4G24000.1 | 36.573 | 391 | 215 | 9 | 220 | 602 | 22 | 387 | 6.89e-71 | 251 |
| Msa1436420 | AT4G24000.1 | 29.245 | 318 | 212 | 6 | 710 | 1019 | 402 | 714 | 4.80e-40 | 159 |
| Msa1436420 | AT4G15320.1 | 28.517 | 789 | 422 | 24 | 206 | 932 | 10 | 718 | 5.48e-70 | 251 |
| Msa1436420 | AT2G32620.4 | 43.197 | 294 | 149 | 6 | 303 | 593 | 1 | 279 | 5.09e-64 | 230 |
| Msa1436420 | AT2G32620.4 | 30.659 | 349 | 206 | 8 | 677 | 999 | 296 | 634 | 2.12e-35 | 144 |
| Msa1436420 | AT4G23990.2 | 32.203 | 295 | 189 | 4 | 709 | 997 | 216 | 505 | 1.56e-42 | 164 |
| Msa1436420 | AT4G23990.2 | 41.038 | 212 | 111 | 5 | 406 | 605 | 3 | 212 | 3.12e-39 | 154 |
| Msa1436420 | AT4G24000.2 | 29.245 | 318 | 212 | 6 | 710 | 1019 | 210 | 522 | 1.26e-40 | 158 |
| Msa1436420 | AT4G24000.2 | 42.365 | 203 | 101 | 5 | 406 | 602 | 3 | 195 | 1.41e-40 | 158 |
Find 252 sgRNAs with CRISPR-Local
Find 365 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTGCTAGTATTTGGTTTA+TGG | 0.085548 | tig0027935:+34480 | Msa1436420:CDS |
| CATTTATATCCTTTCCTTAA+AGG | 0.086991 | tig0027935:+34880 | Msa1436420:CDS |
| GGAAGCTATTCTTTGCATTT+TGG | 0.114246 | tig0027935:+34848 | Msa1436420:CDS |
| GGTTCATGGGGACCTTTATT+TGG | 0.143466 | tig0027935:+34826 | Msa1436420:CDS |
| TTACAGATTGGATGGATTTA+TGG | 0.144892 | tig0027935:+33572 | Msa1436420:intron |
| CATCAAATCTTTGAGGAAAT+TGG | 0.153616 | tig0027935:-32750 | Msa1436420:intergenic |
| TCCTTTCCTTAAAGGTCTTA+TGG | 0.163420 | tig0027935:+34888 | Msa1436420:CDS |
| GCTTCAACTTTGATGGAAAA+TGG | 0.218969 | tig0027935:+33310 | Msa1436420:CDS |
| TGACCAACCTTGCTAGTATT+TGG | 0.222976 | tig0027935:+34473 | Msa1436420:CDS |
| ATCATTCTTCATTCATCTAA+TGG | 0.229710 | tig0027935:+35257 | Msa1436420:three_prime_UTR |
| CCCTTGAAAGCAGGCCTCTT+TGG | 0.236229 | tig0027935:-33665 | Msa1436420:intergenic |
| GTTACCTTGTATTTGTATAT+AGG | 0.255608 | tig0027935:+35154 | Msa1436420:three_prime_UTR |
| GGAAAACATATTCAGAGTTT+TGG | 0.267793 | tig0027935:+35225 | Msa1436420:three_prime_UTR |
| GGTGGAGAAACGAGCAATTC+TGG | 0.274690 | tig0027935:+34572 | Msa1436420:CDS |
| GAGATTGGATATAAGGAAAA+TGG | 0.279794 | tig0027935:+30003 | Msa1436420:CDS |
| TTACCTTGTATTTGTATATA+GGG | 0.283973 | tig0027935:+35155 | Msa1436420:three_prime_UTR |
| CTTATAATCTTGAACATTGT+TGG | 0.290135 | tig0027935:+34763 | Msa1436420:CDS |
| ACAGTGTTTGCTGTTATAAT+AGG | 0.293094 | tig0027935:-31352 | Msa1436420:intergenic |
| CCTTTCCTTAAAGGTCTTAT+GGG | 0.294922 | tig0027935:+34889 | Msa1436420:CDS |
| TTTCATTGCTTCAACTTTGA+TGG | 0.301562 | tig0027935:+33303 | Msa1436420:CDS |
| TACTTGACCAGTTTCCAAAA+TGG | 0.303353 | tig0027935:+31206 | Msa1436420:CDS |
| AAGATAGTTACAAAGAAAAT+AGG | 0.308596 | tig0027935:-29690 | Msa1436420:intergenic |
| AACATTGTTGGCGTTGTTGC+TGG | 0.315186 | tig0027935:+34775 | Msa1436420:CDS |
| GGTACTTTGGTCAATCCTTT+TGG | 0.315619 | tig0027935:+34939 | Msa1436420:CDS |
| CGTGTGATTGGTAACCATTT+TGG | 0.316333 | tig0027935:-31220 | Msa1436420:intergenic |
| CAATTTCCTCAAAGATTTGA+TGG | 0.316628 | tig0027935:+32751 | Msa1436420:CDS |
| CGGGAAATATACACGAGTTT+TGG | 0.321191 | tig0027935:-32432 | Msa1436420:intergenic |
| TTTATTAAGCTTGATGGTAT+TGG | 0.323023 | tig0027935:-31043 | Msa1436420:intergenic |
| ATTGTACAAGAAGAAGAAAA+TGG | 0.323047 | tig0027935:+33135 | Msa1436420:CDS |
| TATCAGTAATATGTGAAATA+TGG | 0.326812 | tig0027935:+31167 | Msa1436420:CDS |
| TGATCATCCAGGGATGATTC+AGG | 0.330657 | tig0027935:+32152 | Msa1436420:CDS |
| CAACAAAAGCAACACCATTT+AGG | 0.338739 | tig0027935:-33049 | Msa1436420:intergenic |
| CATATGATGCATACCCTCTA+TGG | 0.339528 | tig0027935:+31140 | Msa1436420:CDS |
| TCCAGTTACTGGCAAGGATT+TGG | 0.344247 | tig0027935:+30762 | Msa1436420:intron |
| TGGTGATGAGATTGGATATA+AGG | 0.347713 | tig0027935:+29996 | Msa1436420:CDS |
| TATGGATTTATTAAGCTTGA+TGG | 0.349119 | tig0027935:-31049 | Msa1436420:intergenic |
| TGAACTTACCAAAGCGTTCA+TGG | 0.351006 | tig0027935:-32496 | Msa1436420:intergenic |
| AAGAATAGCTTCCCAAATAA+AGG | 0.352215 | tig0027935:-34838 | Msa1436420:intergenic |
| CATGATTAACATCGCGGTTC+TGG | 0.353057 | tig0027935:-30470 | Msa1436420:intergenic |
| CAAGTTCTGAGATGGGCTTT+AGG | 0.353543 | tig0027935:+33722 | Msa1436420:CDS |
| CAGCAATCACATGTCATCTT+TGG | 0.353995 | tig0027935:-33025 | Msa1436420:intergenic |
| TAAAGTGAAAATTAACGCTT+TGG | 0.357920 | tig0027935:+32053 | Msa1436420:CDS |
| CTGAAGCAAGACAACCATTA+TGG | 0.362755 | tig0027935:+31011 | Msa1436420:CDS |
| GCCAAAGAGGCCTGCTTTCA+AGG | 0.364451 | tig0027935:+33664 | Msa1436420:CDS |
| TGTCCGTTGTGGTATGGTTA+TGG | 0.372975 | tig0027935:+33773 | Msa1436420:CDS |
| TAGCATGTAACTTTCTCAAC+AGG | 0.376511 | tig0027935:-31400 | Msa1436420:intergenic |
| GAGTAGAGAAATGGAAAGTA+AGG | 0.377612 | tig0027935:+30827 | Msa1436420:CDS |
| TCTTCATCTCCAACCACTCT+TGG | 0.380315 | tig0027935:-30381 | Msa1436420:intergenic |
| GTTCATGGGGACCTTTATTT+GGG | 0.383016 | tig0027935:+34827 | Msa1436420:CDS |
| TGAGAAGATTGATTACTTGA+AGG | 0.383639 | tig0027935:+31552 | Msa1436420:CDS |
| GAAAAGAGTTATATAAGAAA+TGG | 0.388285 | tig0027935:-29645 | Msa1436420:intergenic |
| GGCAAGAAAGAGTAGAGAAA+TGG | 0.388474 | tig0027935:+30818 | Msa1436420:CDS |
| CATGTGATTGCTGGCCTAAA+TGG | 0.390206 | tig0027935:+33035 | Msa1436420:CDS |
| ACACCACATTGTTTGAGAAT+AGG | 0.398730 | tig0027935:-35021 | Msa1436420:intergenic |
| CCTTTCTTGCCTAAGCAAAC+TGG | 0.407328 | tig0027935:+34997 | Msa1436420:CDS |
| CTTTGGCTTCTTGCCATCCA+TGG | 0.408055 | tig0027935:+29710 | Msa1436420:exon |
| TCAACAGGCGAAAGCTGGTT+TGG | 0.409455 | tig0027935:-31292 | Msa1436420:intergenic |
| GATTGATTACTTGAAGGATA+AGG | 0.410133 | tig0027935:+31558 | Msa1436420:CDS |
| AGAGGCCATGTGCTTCCTAA+TGG | 0.416719 | tig0027935:+32696 | Msa1436420:CDS |
| CAAAGAAAATAGGAGTTAGA+AGG | 0.419930 | tig0027935:-29680 | Msa1436420:intergenic |
| GAAGAAACCTGAGGAGGGTT+GGG | 0.420141 | tig0027935:+32089 | Msa1436420:CDS |
| GAGAGTTATATCTCTTCAAA+TGG | 0.425206 | tig0027935:+34713 | Msa1436420:CDS |
| GCAGCAGATGATGCTGAATT+CGG | 0.427332 | tig0027935:+34691 | Msa1436420:CDS |
| GTCTCATCACAATTACTATT+CGG | 0.429695 | tig0027935:-31072 | Msa1436420:intergenic |
| AACGAGCAATTCTGGGTGAT+TGG | 0.430664 | tig0027935:+34580 | Msa1436420:CDS |
| CGCCATTGTCCGTTGTGGTA+TGG | 0.434378 | tig0027935:+33767 | Msa1436420:CDS |
| TTGTACAAGAAGAAGAAAAT+GGG | 0.437828 | tig0027935:+33136 | Msa1436420:CDS |
| ACTCGCTATAAGCGCCATAA+AGG | 0.437891 | tig0027935:+30126 | Msa1436420:CDS |
| CTTCTTTCCTTGACAAAAGT+AGG | 0.439949 | tig0027935:-31586 | Msa1436420:intergenic |
| CGAGTTTGTGGTGATGAGAT+TGG | 0.440581 | tig0027935:+29988 | Msa1436420:CDS |
| AGGGTAGTCAACAGAAAGTA+TGG | 0.443321 | tig0027935:-31380 | Msa1436420:intergenic |
| ACAACGGACAATGGCGACTA+AGG | 0.443705 | tig0027935:-33760 | Msa1436420:intergenic |
| CTACTCCAGCTAGAACTTTG+AGG | 0.444405 | tig0027935:-34642 | Msa1436420:intergenic |
| TCATAACAAGGCTTACAAAC+AGG | 0.445668 | tig0027935:-30060 | Msa1436420:intergenic |
| GATGAAGATGAAAACCTTGA+TGG | 0.446042 | tig0027935:+30396 | Msa1436420:CDS |
| CCAGTTTGCTTAGGCAAGAA+AGG | 0.446921 | tig0027935:-34997 | Msa1436420:intergenic |
| TCGAAAATATGTCGAGTTTG+TGG | 0.446971 | tig0027935:+29976 | Msa1436420:CDS |
| AGCCATGGTGTTTGTGGCCA+TGG | 0.451283 | tig0027935:-29727 | Msa1436420:intergenic |
| ATCCACCAGTTTCTGAGAAA+AGG | 0.453691 | tig0027935:+33002 | Msa1436420:CDS |
| GCCACAACTTATGTTATGAA+TGG | 0.454463 | tig0027935:-33377 | Msa1436420:intergenic |
| TGCATAACCCAACCCTCCTC+AGG | 0.454891 | tig0027935:-32096 | Msa1436420:intergenic |
| CTCCTACTATTGTGGTACTT+TGG | 0.456509 | tig0027935:+34926 | Msa1436420:CDS |
| AAGTAAGTTTCGCGTGTGAT+TGG | 0.458994 | tig0027935:-31232 | Msa1436420:intergenic |
| TTAACAGTGGTAGTGGTTCA+TGG | 0.459246 | tig0027935:+34812 | Msa1436420:CDS |
| GATTGCGTATTTGTGCCTTC+AGG | 0.460617 | tig0027935:-33340 | Msa1436420:intergenic |
| CTAAAGCCCATCTCAGAACT+TGG | 0.460659 | tig0027935:-33721 | Msa1436420:intergenic |
| GTTCAAATCTTATAGATAAA+CGG | 0.461821 | tig0027935:-31258 | Msa1436420:intergenic |
| TCCCTAGTTGAGGATCCATT+AGG | 0.465416 | tig0027935:-32711 | Msa1436420:intergenic |
| AGTGAAAATTAACGCTTTGG+TGG | 0.467167 | tig0027935:+32056 | Msa1436420:CDS |
| TTGTCTGTTGAACACAGTTC+CGG | 0.467556 | tig0027935:-32963 | Msa1436420:intergenic |
| GGAAAAGATTATGTTAGAAA+AGG | 0.468271 | tig0027935:+33160 | Msa1436420:CDS |
| GAGATTGAAGAAGGACTTGA+AGG | 0.469245 | tig0027935:+33208 | Msa1436420:CDS |
| GTGGAGAAACGAGCAATTCT+GGG | 0.469735 | tig0027935:+34573 | Msa1436420:CDS |
| AAATACGCAATCATTGGTTA+AGG | 0.469819 | tig0027935:+33351 | Msa1436420:CDS |
| ATTGGAACTTTGCGCCATAA+TGG | 0.473762 | tig0027935:-31025 | Msa1436420:intergenic |
| CAAAGATGACATGTGATTGC+TGG | 0.474058 | tig0027935:+33026 | Msa1436420:CDS |
| CCGGTGTACTCGAGCTTCGA+TGG | 0.475657 | tig0027935:+34527 | Msa1436420:CDS |
| ATCACAATTACTATTCGGTA+TGG | 0.477874 | tig0027935:-31067 | Msa1436420:intergenic |
| AGCTGGTGCCATGAACGCTT+TGG | 0.478501 | tig0027935:+32488 | Msa1436420:CDS |
| AGAATAGGACCAGTTTGCTT+AGG | 0.480129 | tig0027935:-35006 | Msa1436420:intergenic |
| CAGGTATACTTAGGAAGTGC+TGG | 0.480378 | tig0027935:+32381 | Msa1436420:intron |
| TGAAGAAACCTGAGGAGGGT+TGG | 0.480922 | tig0027935:+32088 | Msa1436420:CDS |
| CCCATAAGACCTTTAAGGAA+AGG | 0.481887 | tig0027935:-34889 | Msa1436420:intergenic |
| ATGAGAAAATTGATGCCAAA+AGG | 0.481962 | tig0027935:-34954 | Msa1436420:intergenic |
| CTTCAAAATCATCTCCATCA+AGG | 0.490001 | tig0027935:-30410 | Msa1436420:intergenic |
| GTCTTATGGGAAAACAAAAC+AGG | 0.491114 | tig0027935:+34902 | Msa1436420:CDS |
| CAATCGAGATTCAACATGAA+TGG | 0.491170 | tig0027935:-32640 | Msa1436420:intergenic |
| TTGGCTTTGCAGGTATACTT+AGG | 0.492259 | tig0027935:+32372 | Msa1436420:intron |
| TTCAAGATTATAAGAGTGGT+TGG | 0.497240 | tig0027935:-34754 | Msa1436420:intergenic |
| AGGCACAAATACGCAATCAT+TGG | 0.497825 | tig0027935:+33345 | Msa1436420:CDS |
| CAAGCCAGCCATGGTGTTTG+TGG | 0.498990 | tig0027935:-29733 | Msa1436420:intergenic |
| TTCAACAGACAAGCATTGTA+TGG | 0.499531 | tig0027935:+32974 | Msa1436420:CDS |
| AAAGTTGAAGCAATGAAAAC+CGG | 0.500806 | tig0027935:-33298 | Msa1436420:intergenic |
| CTTCTGAGTTTGCTCGAAGG+TGG | 0.500934 | tig0027935:+31473 | Msa1436420:CDS |
| CCCTGCAGGTTGTCCAAGAG+TGG | 0.501687 | tig0027935:+30368 | Msa1436420:intron |
| GATTATGTTAGAAAAGGATC+TGG | 0.501904 | tig0027935:+33166 | Msa1436420:CDS |
| GAAGCGATTTGGTCAGTCTC+CGG | 0.503002 | tig0027935:+33279 | Msa1436420:CDS |
| ATAATAGGCGGTTCTTTCAA+AGG | 0.504517 | tig0027935:-31337 | Msa1436420:intergenic |
| CACCTATCAATCTGTCAGAT+AGG | 0.504559 | tig0027935:+33693 | Msa1436420:CDS |
| GGTTTCCTCAAAGTTCTAGC+TGG | 0.504559 | tig0027935:+34637 | Msa1436420:CDS |
| AAAGGGCTCGATGGTATTCA+AGG | 0.505353 | tig0027935:+32923 | Msa1436420:CDS |
| TCAATACCATCAAATCTTTG+AGG | 0.505427 | tig0027935:-32757 | Msa1436420:intergenic |
| AATTAACGCTTTGGTGGCAA+AGG | 0.506295 | tig0027935:+32062 | Msa1436420:CDS |
| TAACAGTGGTAGTGGTTCAT+GGG | 0.506583 | tig0027935:+34813 | Msa1436420:CDS |
| ATCCAAACCTGAATCATCCC+TGG | 0.507285 | tig0027935:-32159 | Msa1436420:intergenic |
| CAGAGTTTCTTCCCTAGTTG+AGG | 0.508762 | tig0027935:-32721 | Msa1436420:intergenic |
| CTCCTTTCATACTCATAACA+AGG | 0.509719 | tig0027935:-30072 | Msa1436420:intergenic |
| ATGCTGAGAAGTTGTGAAAG+AGG | 0.512498 | tig0027935:+35047 | Msa1436420:exon |
| ATTACTGATATGAGCCATAG+AGG | 0.513695 | tig0027935:-31154 | Msa1436420:intergenic |
| GACCAAAGTACCACAATAGT+AGG | 0.513830 | tig0027935:-34928 | Msa1436420:intergenic |
| ACCATGGCTGGCTTGATCAC+CGG | 0.514768 | tig0027935:+29741 | Msa1436420:CDS |
| CCAAAGAGGCCTGCTTTCAA+GGG | 0.515156 | tig0027935:+33665 | Msa1436420:CDS |
| ACTAAAGTATCTAGAGAGGT+TGG | 0.518367 | tig0027935:+33802 | Msa1436420:CDS |
| GATCTCGAAGAGATTGAAGA+AGG | 0.520250 | tig0027935:+33199 | Msa1436420:CDS |
| ATGGCCACAAACACCATGGC+TGG | 0.521203 | tig0027935:+29729 | Msa1436420:CDS |
| TGATTATTTACAGGAAAGTG+TGG | 0.521337 | tig0027935:+30599 | Msa1436420:intron |
| TTCCTAATGGATCCTCAACT+AGG | 0.523564 | tig0027935:+32709 | Msa1436420:CDS |
| AACAACACTCGTGATCATCC+AGG | 0.524459 | tig0027935:+32141 | Msa1436420:CDS |
| TTCTGAGTTTGCTCGAAGGT+GGG | 0.525003 | tig0027935:+31474 | Msa1436420:CDS |
| AGCAAAGGGATTGAAGTGAA+TGG | 0.526884 | tig0027935:-33848 | Msa1436420:intergenic |
| AAACATCAACAGGCGAAAGC+TGG | 0.527228 | tig0027935:-31297 | Msa1436420:intergenic |
| GGTTGCACCAAGTTCTGAGA+TGG | 0.527689 | tig0027935:+33714 | Msa1436420:CDS |
| AAACCAAATACTAGCAAGGT+TGG | 0.528295 | tig0027935:-34476 | Msa1436420:intergenic |
| CCAGCTGTGTGTCTTCTGAC+AGG | 0.528370 | tig0027935:+33887 | Msa1436420:CDS |
| CAGTATATTGCATGCCAAAG+AGG | 0.531421 | tig0027935:+33651 | Msa1436420:CDS |
| TACTGGCAAGGATTTGGAAG+GGG | 0.532104 | tig0027935:+30768 | Msa1436420:CDS |
| AAGTAATACTCAGGTGCCCT+TGG | 0.532424 | tig0027935:-31526 | Msa1436420:intergenic |
| GTGGAGTTGCGATCGAAGAC+TGG | 0.533884 | tig0027935:+34551 | Msa1436420:CDS |
| CAAGATGGAACTCCATGGCC+TGG | 0.534501 | tig0027935:+32117 | Msa1436420:CDS |
| GGTGCAGACCCCTTGAAAGC+AGG | 0.540302 | tig0027935:-33674 | Msa1436420:intergenic |
| GGTCCAGTGTATGTCGGTAC+CGG | 0.540339 | tig0027935:+32944 | Msa1436420:CDS |
| CATATGCAGGTGTTAAGATA+CGG | 0.542764 | tig0027935:-31123 | Msa1436420:intergenic |
| TATCATAGATCAATATGAAA+GGG | 0.543996 | tig0027935:+32906 | Msa1436420:intron |
| GAGTACACCGGTTAAAATGA+TGG | 0.544212 | tig0027935:-34515 | Msa1436420:intergenic |
| TTCTTGTGATGTGGATAACC+AGG | 0.545164 | tig0027935:-32465 | Msa1436420:intergenic |
| CTATGAAGAGAAGACTGACT+GGG | 0.547237 | tig0027935:+33399 | Msa1436420:CDS |
| GCTATGAAGAGAAGACTGAC+TGG | 0.547807 | tig0027935:+33398 | Msa1436420:CDS |
| TCTATAAGATTTGAACGTGA+AGG | 0.548818 | tig0027935:+31265 | Msa1436420:CDS |
| AACCTATCTGACAGATTGAT+AGG | 0.549050 | tig0027935:-33695 | Msa1436420:intergenic |
| GATGAAGATTTACTGGTAGG+AGG | 0.549107 | tig0027935:-29955 | Msa1436420:intergenic |
| GATGCTATTAACAGTGGTAG+TGG | 0.549146 | tig0027935:+34805 | Msa1436420:CDS |
| GCAGGTTGTCCAAGAGTGGT+TGG | 0.550939 | tig0027935:+30372 | Msa1436420:intron |
| AATGTTCAAGATTATAAGAG+TGG | 0.552442 | tig0027935:-34758 | Msa1436420:intergenic |
| TGATCACGAGTGTTGTTACC+AGG | 0.553861 | tig0027935:-32135 | Msa1436420:intergenic |
| CGAGTGTTGTTACCAGGCCA+TGG | 0.554027 | tig0027935:-32129 | Msa1436420:intergenic |
| AACCATACCACAACGGACAA+TGG | 0.554382 | tig0027935:-33769 | Msa1436420:intergenic |
| AGCCTTGTTATGAGTATGAA+AGG | 0.554461 | tig0027935:+30070 | Msa1436420:CDS |
| GAAGACTGACTGGGGAAAAG+AGG | 0.554814 | tig0027935:+33408 | Msa1436420:CDS |
| TTAAGATGCACTGCAGAGGA+TGG | 0.556703 | tig0027935:+33624 | Msa1436420:CDS |
| CAAGGAAAGAAGGTCTATGA+AGG | 0.557375 | tig0027935:+31597 | Msa1436420:CDS |
| TCATCATGATGATTCTTGAC+CGG | 0.558168 | tig0027935:-30441 | Msa1436420:intergenic |
| GGTACTCATCTTCTTCACCT+TGG | 0.558311 | tig0027935:-30894 | Msa1436420:intergenic |
| AAATATGGTTTGCACTGTCA+TGG | 0.559125 | tig0027935:+31182 | Msa1436420:CDS |
| TTGTGCAGTATGCTAGCAAA+GGG | 0.561163 | tig0027935:-33862 | Msa1436420:intergenic |
| ATCAATATGAAAGGGCTCGA+TGG | 0.562553 | tig0027935:+32914 | Msa1436420:CDS |
| GGAAACGGAAGAAGAATGCT+AGG | 0.564218 | tig0027935:-31102 | Msa1436420:intergenic |
| TTCGATGAAGATTTACTGGT+AGG | 0.564297 | tig0027935:-29958 | Msa1436420:intergenic |
| AATCTCTTCGAGATCAAACA+TGG | 0.564981 | tig0027935:-33191 | Msa1436420:intergenic |
| GTACTCGAGCTTCGATGGAG+TGG | 0.567634 | tig0027935:+34532 | Msa1436420:CDS |
| AAAGTATAGTATTGAACCAA+GGG | 0.568992 | tig0027935:+31510 | Msa1436420:CDS |
| ATGAGTATGAAAGGAGTGAA+GGG | 0.569105 | tig0027935:+30079 | Msa1436420:CDS |
| GCCATTCATAACATAAGTTG+TGG | 0.569594 | tig0027935:+33376 | Msa1436420:CDS |
| GTTACTGGCAAGGATTTGGA+AGG | 0.571633 | tig0027935:+30766 | Msa1436420:intron |
| GAGGGTTGGGTTATGCAAGA+TGG | 0.571841 | tig0027935:+32102 | Msa1436420:CDS |
| GAGCAATTCTGGGTGATTGG+AGG | 0.572765 | tig0027935:+34583 | Msa1436420:CDS |
| TATCCACATCACAAGAAAGC+TGG | 0.574444 | tig0027935:+32471 | Msa1436420:CDS |
| AGAGGGTATGCATCATATGC+AGG | 0.574991 | tig0027935:-31136 | Msa1436420:intergenic |
| GAAGATTTACTGGTAGGAGG+AGG | 0.580513 | tig0027935:-29952 | Msa1436420:intergenic |
| TGAAGTGAATGGATAAACAA+TGG | 0.580549 | tig0027935:-33837 | Msa1436420:intergenic |
| TCCTAATGGATCCTCAACTA+GGG | 0.581064 | tig0027935:+32710 | Msa1436420:CDS |
| GGCTCTGAAGAAACCTGAGG+AGG | 0.581450 | tig0027935:+32083 | Msa1436420:CDS |
| GTTGCACCAAGTTCTGAGAT+GGG | 0.581471 | tig0027935:+33715 | Msa1436420:CDS |
| TATGAGTATGAAAGGAGTGA+AGG | 0.581494 | tig0027935:+30078 | Msa1436420:CDS |
| AAGATTATAAGAGTGGTTGG+TGG | 0.581930 | tig0027935:-34751 | Msa1436420:intergenic |
| CCTGTCAGAAGACACACAGC+TGG | 0.582353 | tig0027935:-33887 | Msa1436420:intergenic |
| GTGTTTGCTGTTATAATAGG+CGG | 0.582570 | tig0027935:-31349 | Msa1436420:intergenic |
| TGCACTAGACGTGGAAGGCA+AGG | 0.582661 | tig0027935:+32404 | Msa1436420:CDS |
| AAACAGGACTCCTACTATTG+TGG | 0.584032 | tig0027935:+34918 | Msa1436420:CDS |
| ATATCATAGATCAATATGAA+AGG | 0.584549 | tig0027935:+32905 | Msa1436420:intron |
| ATGGTGTTTGTGGCCATGGA+TGG | 0.585266 | tig0027935:-29723 | Msa1436420:intergenic |
| AAGTGCTGGTGCACTAGACG+TGG | 0.585858 | tig0027935:+32395 | Msa1436420:CDS |
| TTCTCATTAAAGTAATACTC+AGG | 0.586653 | tig0027935:-31535 | Msa1436420:intergenic |
| GGTCTATTAAACAAAGAGGA+TGG | 0.588729 | tig0027935:+30862 | Msa1436420:CDS |
| GCCGGTGATCAAGCCAGCCA+TGG | 0.592740 | tig0027935:-29742 | Msa1436420:intergenic |
| GAGAGGTCTATTAAACAAAG+AGG | 0.593428 | tig0027935:+30858 | Msa1436420:CDS |
| TTATAGCGAGTGTTGCATTG+AGG | 0.596029 | tig0027935:-30114 | Msa1436420:intergenic |
| ACATGCTATGTATCAGATGA+TGG | 0.599208 | tig0027935:+31415 | Msa1436420:CDS |
| GCACCAGCTTTCTTGTGATG+TGG | 0.599834 | tig0027935:-32474 | Msa1436420:intergenic |
| TGAGAAATGAGAATTAGAGC+CGG | 0.599874 | tig0027935:-29760 | Msa1436420:intergenic |
| AGAGTTATATAAGAAATGGT+AGG | 0.603357 | tig0027935:-29641 | Msa1436420:intergenic |
| AAAAGTATAGTATTGAACCA+AGG | 0.604899 | tig0027935:+31509 | Msa1436420:CDS |
| GTTCCGGTACCGACATACAC+TGG | 0.608801 | tig0027935:-32947 | Msa1436420:intergenic |
| GAGTTGCGATCGAAGACTGG+TGG | 0.608941 | tig0027935:+34554 | Msa1436420:CDS |
| CCATCGAAGCTCGAGTACAC+CGG | 0.609136 | tig0027935:-34527 | Msa1436420:intergenic |
| ATTGTGCAGTATGCTAGCAA+AGG | 0.610701 | tig0027935:-33863 | Msa1436420:intergenic |
| CAGGTGTTAAGATACGGAAA+CGG | 0.615839 | tig0027935:-31117 | Msa1436420:intergenic |
| AAACTTCTGAGTTTGCTCGA+AGG | 0.618206 | tig0027935:+31470 | Msa1436420:CDS |
| GGATTTAAGATGCACTGCAG+AGG | 0.622405 | tig0027935:+33620 | Msa1436420:CDS |
| CCATAAACCAAATACTAGCA+AGG | 0.627526 | tig0027935:-34480 | Msa1436420:intergenic |
| TTAGTCGCCATTGTCCGTTG+TGG | 0.629096 | tig0027935:+33762 | Msa1436420:CDS |
| TAACCCTATATACAAATACA+AGG | 0.632084 | tig0027935:-35158 | Msa1436420:intergenic |
| GAAAACTAAAGTATCTAGAG+AGG | 0.632756 | tig0027935:+33798 | Msa1436420:CDS |
| TTACTGATATGAGCCATAGA+GGG | 0.633860 | tig0027935:-31153 | Msa1436420:intergenic |
| TTACTGGCAAGGATTTGGAA+GGG | 0.635440 | tig0027935:+30767 | Msa1436420:CDS |
| TTTCTCAAATGACTCTGATG+AGG | 0.635631 | tig0027935:+29776 | Msa1436420:CDS |
| ACAACACTCGTGATCATCCA+GGG | 0.637841 | tig0027935:+32142 | Msa1436420:CDS |
| TACAAGAAGAAGAAAATGGG+AGG | 0.643239 | tig0027935:+33139 | Msa1436420:CDS |
| CAAAGAGGCCTGCTTTCAAG+GGG | 0.644794 | tig0027935:+33666 | Msa1436420:CDS |
| ATCCATGGCCACAAACACCA+TGG | 0.646471 | tig0027935:+29725 | Msa1436420:exon |
| CAATAGCAAGGCTATTAGAG+AGG | 0.646495 | tig0027935:+32678 | Msa1436420:CDS |
| GCTCTGAAGAAACCTGAGGA+GGG | 0.646838 | tig0027935:+32084 | Msa1436420:CDS |
| GAAAATGGAGGACTTCCTGA+AGG | 0.649098 | tig0027935:+33325 | Msa1436420:CDS |
| AACAGTGGTAGTGGTTCATG+GGG | 0.650444 | tig0027935:+34814 | Msa1436420:CDS |
| TCAACTTTGATGGAAAATGG+AGG | 0.650813 | tig0027935:+33313 | Msa1436420:CDS |
| TTATGCAAGATGGAACTCCA+TGG | 0.651144 | tig0027935:+32112 | Msa1436420:CDS |
| GAACCGCGATGTTAATCATG+TGG | 0.654400 | tig0027935:+30473 | Msa1436420:CDS |
| ATTCAAGGTCCAGTGTATGT+CGG | 0.656666 | tig0027935:+32938 | Msa1436420:CDS |
| GTCTCTGATGCTATTAACAG+TGG | 0.659427 | tig0027935:+34799 | Msa1436420:CDS |
| AAAGTAAGGCAAGAAAAGAG+AGG | 0.661249 | tig0027935:+30841 | Msa1436420:CDS |
| CCGTTGTGGTATGGTTATGG+AGG | 0.665569 | tig0027935:+33776 | Msa1436420:CDS |
| GCTGGTGCACTAGACGTGGA+AGG | 0.667350 | tig0027935:+32399 | Msa1436420:CDS |
| AGAAGGACTTGAAGGGTACG+AGG | 0.671874 | tig0027935:+33216 | Msa1436420:CDS |
| TCACTACATCAACAATAGCA+AGG | 0.673996 | tig0027935:+32666 | Msa1436420:CDS |
| AGGATCCATTAGGAAGCACA+TGG | 0.676227 | tig0027935:-32701 | Msa1436420:intergenic |
| AGCATGTAACTTTCTCAACA+GGG | 0.684136 | tig0027935:-31399 | Msa1436420:intergenic |
| AGATTGAAGAAGGACTTGAA+GGG | 0.687955 | tig0027935:+33209 | Msa1436420:CDS |
| AAAGGCTCTGAAGAAACCTG+AGG | 0.698711 | tig0027935:+32080 | Msa1436420:CDS |
| GGTCCTATTCTCAAACAATG+TGG | 0.702569 | tig0027935:+35018 | Msa1436420:CDS |
| TATGAAGAGAAGACTGACTG+GGG | 0.708217 | tig0027935:+33400 | Msa1436420:CDS |
| GAGGATGGTAAAGAAGACCA+AGG | 0.711593 | tig0027935:+30877 | Msa1436420:CDS |
| CCTCCATAACCATACCACAA+CGG | 0.716274 | tig0027935:-33776 | Msa1436410:intergenic |
| TTACCACATGATTAACATCG+CGG | 0.717547 | tig0027935:-30476 | Msa1436410:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTACAAAATAACATTA+TGG | - | tig0027935:30207-30226 | Msa1436420:intergenic | 10.0% |
| !!! | ATGATTAATAATTTGTATAA+TGG | - | tig0027935:30725-30744 | Msa1436420:intergenic | 10.0% |
| !! | AAACAGTTTATATATAATTT+AGG | + | tig0027935:32318-32337 | Msa1436420:intron | 10.0% |
| !!! | ATACTATACTTTTTACAAAA+AGG | - | tig0027935:31502-31521 | Msa1436420:intergenic | 15.0% |
| !!! | TTGTAACTATTGTTAATTTT+TGG | + | tig0027935:35203-35222 | Msa1436420:three_prime_UTR | 15.0% |
| !!! | TGTAACTATTGTTAATTTTT+GGG | + | tig0027935:35204-35223 | Msa1436420:three_prime_UTR | 15.0% |
| !! | GAAAAGAGTTATATAAGAAA+TGG | - | tig0027935:29648-29667 | Msa0923320:intergenic | 20.0% |
| !! | AAGATAGTTACAAAGAAAAT+AGG | - | tig0027935:29693-29712 | Msa0923320:intergenic | 20.0% |
| !!! | ATTTTCTTTGTAACTATCTT+TGG | + | tig0027935:29693-29712 | Msa1436420:five_prime_UTR | 20.0% |
| !!! | AAGTTTGTTTTATAAAGCAT+TGG | + | tig0027935:29883-29902 | Msa1436420:intron | 20.0% |
| !!! | TTTTAAATACTGAATCAGAT+TGG | - | tig0027935:30318-30337 | Msa1436420:intergenic | 20.0% |
| !! | GAGATTATATGATTATTTAC+AGG | + | tig0027935:30590-30609 | Msa1436420:intron | 20.0% |
| !! | TTTACCTTATTATTACAGTA+TGG | + | tig0027935:30988-31007 | Msa1436420:intron | 20.0% |
| !! | TATCAGTAATATGTGAAATA+TGG | + | tig0027935:31167-31186 | Msa1436420:CDS | 20.0% |
| !! | GTTCAAATCTTATAGATAAA+CGG | - | tig0027935:31261-31280 | Msa1436420:intergenic | 20.0% |
| !!! | GAAGGTAATTTTTAAAGATA+TGG | + | tig0027935:31615-31634 | Msa1436420:intron | 20.0% |
| !!! | TGGTTTGTTTTACTTATTTT+CGG | + | tig0027935:31635-31654 | Msa1436420:intron | 20.0% |
| !! | ATAAAAACATCTTATACCAT+AGG | - | tig0027935:31841-31860 | Msa1436420:intergenic | 20.0% |
| !! | ATGATATAAACAACGTTTAA+TGG | - | tig0027935:32892-32911 | Msa1436420:intergenic | 20.0% |
| !! | ATATCATAGATCAATATGAA+AGG | + | tig0027935:32905-32924 | Msa1436420:intron | 20.0% |
| !! | TATCATAGATCAATATGAAA+GGG | + | tig0027935:32906-32925 | Msa1436420:intron | 20.0% |
| !!! | GACATTTTTTAATACTCTAA+AGG | - | tig0027935:34234-34253 | Msa1436420:intergenic | 20.0% |
| !!! | AGAGTATTAAAAAATGTCTA+TGG | + | tig0027935:34236-34255 | Msa1436420:intron | 20.0% |
| !!! | TTTATATCCATCATTTTAAC+CGG | + | tig0027935:34508-34527 | Msa1436420:CDS | 20.0% |
| !!! | ATCAATTTTCTCATTGATTT+GGG | + | tig0027935:34963-34982 | Msa1436420:CDS | 20.0% |
| !! | TTACCTTGTATTTGTATATA+GGG | + | tig0027935:35155-35174 | Msa1436420:three_prime_UTR | 20.0% |
| !!! | TATAAAGCATTGGTCTTATA+TGG | + | tig0027935:29893-29912 | Msa1436420:intron | 25.0% |
| !! | TATTTTCGATGAAGATTTAC+TGG | - | tig0027935:29965-29984 | Msa1436420:intergenic | 25.0% |
| ! | AAAATACTTGCACTAGTAAA+TGG | + | tig0027935:30221-30240 | Msa1436420:intron | 25.0% |
| !!! | GTAAGAACCTTGTTTAATTT+TGG | + | tig0027935:30667-30686 | Msa1436420:intron | 25.0% |
| ! | AGTGTTTCCAAAATTAAACA+AGG | - | tig0027935:30677-30696 | Msa1436420:intergenic | 25.0% |
| !! | AATTTTACAGCAATGAAGAA+TGG | + | tig0027935:30797-30816 | Msa1436420:CDS | 25.0% |
| !! | TTTATTAAGCTTGATGGTAT+TGG | - | tig0027935:31046-31065 | Msa1436420:intergenic | 25.0% |
| ! | TATGGATTTATTAAGCTTGA+TGG | - | tig0027935:31052-31071 | Msa1436420:intergenic | 25.0% |
| !!! | TATGCTTTTGTTTGATTGTT+TGG | + | tig0027935:31444-31463 | Msa1436420:CDS | 25.0% |
| !! | AAAAGTATAGTATTGAACCA+AGG | + | tig0027935:31509-31528 | Msa1436420:CDS | 25.0% |
| !! | AAAGTATAGTATTGAACCAA+GGG | + | tig0027935:31510-31529 | Msa1436420:CDS | 25.0% |
| ! | TTCTCATTAAAGTAATACTC+AGG | - | tig0027935:31538-31557 | Msa1436420:intergenic | 25.0% |
| ! | TAAAGTGAAAATTAACGCTT+TGG | + | tig0027935:32053-32072 | Msa1436420:CDS | 25.0% |
| ! | ATAAAACAAGAACAAGTTAG+AGG | - | tig0027935:32192-32211 | Msa1436420:intergenic | 25.0% |
| !! | TTTTCACAAGTTTACCATAA+TGG | + | tig0027935:32288-32307 | Msa1436420:intron | 25.0% |
| ! | ATTGTACAAGAAGAAGAAAA+TGG | + | tig0027935:33135-33154 | Msa1436420:CDS | 25.0% |
| ! | TTGTACAAGAAGAAGAAAAT+GGG | + | tig0027935:33136-33155 | Msa1436420:CDS | 25.0% |
| ! | GGAAAAGATTATGTTAGAAA+AGG | + | tig0027935:33160-33179 | Msa1436420:CDS | 25.0% |
| ! | AATATTTCTTCACTGTGTTA+AGG | - | tig0027935:33458-33477 | Msa1436420:intergenic | 25.0% |
| !! | ATATGTTTTCCATTACAGAT+TGG | + | tig0027935:33560-33579 | Msa1436420:intron | 25.0% |
| !! | ATTTTCTTAACCGTTAAAGA+TGG | + | tig0027935:33988-34007 | Msa1436420:intron | 25.0% |
| !! | TTAAGGTGTTAATCCAAATA+GGG | - | tig0027935:34033-34052 | Msa1436420:intergenic | 25.0% |
| !! | ATTAAGGTGTTAATCCAAAT+AGG | - | tig0027935:34034-34053 | Msa1436420:intergenic | 25.0% |
| !! | TAATACTCTAAAGGTCTATT+TGG | - | tig0027935:34225-34244 | Msa1436420:intergenic | 25.0% |
| ! | TGTGATTCTTTGTAATATCA+AGG | + | tig0027935:34347-34366 | Msa1436420:intron | 25.0% |
| ! | AATGTTCAAGATTATAAGAG+TGG | - | tig0027935:34761-34780 | Msa1436420:intergenic | 25.0% |
| ! | CTTATAATCTTGAACATTGT+TGG | + | tig0027935:34763-34782 | Msa1436420:CDS | 25.0% |
| ! | CATTTATATCCTTTCCTTAA+AGG | + | tig0027935:34880-34899 | Msa1436420:CDS | 25.0% |
| !!! | CATCAATTTTCTCATTGATT+TGG | + | tig0027935:34962-34981 | Msa1436420:CDS | 25.0% |
| ! | GTTACCTTGTATTTGTATAT+AGG | + | tig0027935:35154-35173 | Msa1436420:three_prime_UTR | 25.0% |
| ! | TAACCCTATATACAAATACA+AGG | - | tig0027935:35161-35180 | Msa1436420:intergenic | 25.0% |
| ! | ATCATTCTTCATTCATCTAA+TGG | + | tig0027935:35257-35276 | Msa1436420:three_prime_UTR | 25.0% |
| CAAAGAAAATAGGAGTTAGA+AGG | - | tig0027935:29683-29702 | Msa0923320:intergenic | 30.0% | |
| ! | ACCTTTTCCTTCTTTCTTTT+TGG | + | tig0027935:29804-29823 | Msa1436420:intron | 30.0% |
| ACCAAAAAGAAAGAAGGAAA+AGG | - | tig0027935:29808-29827 | Msa1436420:intergenic | 30.0% | |
| !!! | TTCCTTCTTTCTTTTTGGTT+CGG | + | tig0027935:29809-29828 | Msa1436420:intron | 30.0% |
| GAGATTGGATATAAGGAAAA+TGG | + | tig0027935:30003-30022 | Msa1436420:CDS | 30.0% | |
| !!! | GTTTTTTACGCTAACCTTTA+TGG | - | tig0027935:30143-30162 | Msa1436420:intergenic | 30.0% |
| AAATACTGAATCAGATTGGA+CGG | - | tig0027935:30314-30333 | Msa1436420:intergenic | 30.0% | |
| !! | TGATTTTGAAGATGAGTTTC+CGG | + | tig0027935:30422-30441 | Msa1436420:CDS | 30.0% |
| TGATTATTTACAGGAAAGTG+TGG | + | tig0027935:30599-30618 | Msa1436420:intron | 30.0% | |
| TCACTTCCTGATTAACAATT+TGG | + | tig0027935:30926-30945 | Msa1436420:intron | 30.0% | |
| TCAGCCATACTGTAATAATA+AGG | - | tig0027935:30995-31014 | Msa1436420:intergenic | 30.0% | |
| ATCACAATTACTATTCGGTA+TGG | - | tig0027935:31070-31089 | Msa1436420:intergenic | 30.0% | |
| GTCTCATCACAATTACTATT+CGG | - | tig0027935:31075-31094 | Msa1436420:intergenic | 30.0% | |
| TCTATAAGATTTGAACGTGA+AGG | + | tig0027935:31265-31284 | Msa1436420:CDS | 30.0% | |
| GAACTAACAAAAACATCAAC+AGG | - | tig0027935:31310-31329 | Msa1436420:intergenic | 30.0% | |
| !! | ACAGTGTTTGCTGTTATAAT+AGG | - | tig0027935:31355-31374 | Msa1436420:intergenic | 30.0% |
| TGAGAAGATTGATTACTTGA+AGG | + | tig0027935:31552-31571 | Msa1436420:CDS | 30.0% | |
| GATTGATTACTTGAAGGATA+AGG | + | tig0027935:31558-31577 | Msa1436420:CDS | 30.0% | |
| TTCAAATAAGTCAATCGATC+AGG | + | tig0027935:31815-31834 | Msa1436420:intron | 30.0% | |
| CTAGTTTACATAAACTCTCT+CGG | - | tig0027935:31871-31890 | Msa1436420:intergenic | 30.0% | |
| TTGTGAAAAGAAGCTGAAAA+AGG | - | tig0027935:32277-32296 | Msa1436420:intergenic | 30.0% | |
| !! | ACTGTTTCTATAGACCATTA+TGG | - | tig0027935:32305-32324 | Msa1436420:intergenic | 30.0% |
| TTGAATTGTTTAATTCCTGC+AGG | + | tig0027935:32530-32549 | Msa1436420:intron | 30.0% | |
| !! | TGTTTTTGTCTGTCTTCAAA+AGG | + | tig0027935:32588-32607 | Msa1436420:intron | 30.0% |
| ! | CATCAAATCTTTGAGGAAAT+TGG | - | tig0027935:32753-32772 | Msa1436420:intergenic | 30.0% |
| CAATTTCCTCAAAGATTTGA+TGG | + | tig0027935:32751-32770 | Msa1436420:CDS | 30.0% | |
| TCAATACCATCAAATCTTTG+AGG | - | tig0027935:32760-32779 | Msa1436420:intergenic | 30.0% | |
| ACCAAATCAAAAAAGAAGTC+AGG | + | tig0027935:33085-33104 | Msa1436420:CDS | 30.0% | |
| !!! | TCCTGACTTCTTTTTTGATT+TGG | - | tig0027935:33089-33108 | Msa1436420:intergenic | 30.0% |
| AAAAAGAAGTCAGGAACAAA+TGG | + | tig0027935:33094-33113 | Msa1436420:CDS | 30.0% | |
| GATTATGTTAGAAAAGGATC+TGG | + | tig0027935:33166-33185 | Msa1436420:CDS | 30.0% | |
| AAAAATTTCGAGAAGCGATT+TGG | + | tig0027935:33268-33287 | Msa1436420:CDS | 30.0% | |
| AAAGTTGAAGCAATGAAAAC+CGG | - | tig0027935:33301-33320 | Msa1436420:intergenic | 30.0% | |
| TTTCATTGCTTCAACTTTGA+TGG | + | tig0027935:33303-33322 | Msa1436420:CDS | 30.0% | |
| ! | AAATACGCAATCATTGGTTA+AGG | + | tig0027935:33351-33370 | Msa1436420:CDS | 30.0% |
| TAAATCCATCCAATCTGTAA+TGG | - | tig0027935:33572-33591 | Msa1436420:intergenic | 30.0% | |
| ! | TTACAGATTGGATGGATTTA+TGG | + | tig0027935:33572-33591 | Msa1436420:intron | 30.0% |
| ! | GAAAACTAAAGTATCTAGAG+AGG | + | tig0027935:33798-33817 | Msa1436420:CDS | 30.0% |
| TGAAGTGAATGGATAAACAA+TGG | - | tig0027935:33840-33859 | Msa1436420:intergenic | 30.0% | |
| ATGCTATCAACGCTTAATTA+AGG | - | tig0027935:34050-34069 | Msa1436420:intergenic | 30.0% | |
| AATAGCATCAATACTCTCAA+AGG | - | tig0027935:34404-34423 | Msa1436420:intergenic | 30.0% | |
| GAGAGTTATATCTCTTCAAA+TGG | + | tig0027935:34713-34732 | Msa1436420:CDS | 30.0% | |
| TTCAAGATTATAAGAGTGGT+TGG | - | tig0027935:34757-34776 | Msa1436420:intergenic | 30.0% | |
| AAGAATAGCTTCCCAAATAA+AGG | - | tig0027935:34841-34860 | Msa1436420:intergenic | 30.0% | |
| ! | GAAGCTATTCTTTGCATTTT+GGG | + | tig0027935:34849-34868 | Msa1436420:CDS | 30.0% |
| ATGAGAAAATTGATGCCAAA+AGG | - | tig0027935:34957-34976 | Msa1436420:intergenic | 30.0% | |
| !!! | TTTTCTCATTGATTTGGGTT+AGG | + | tig0027935:34968-34987 | Msa1436420:CDS | 30.0% |
| ! | GGAAAACATATTCAGAGTTT+TGG | + | tig0027935:35225-35244 | Msa1436420:three_prime_UTR | 30.0% |
| TGAGAAATGAGAATTAGAGC+CGG | - | tig0027935:29763-29782 | Msa1436420:intergenic | 35.0% | |
| TTTCTCAAATGACTCTGATG+AGG | + | tig0027935:29776-29795 | Msa1436420:CDS | 35.0% | |
| TTCCGAACCAAAAAGAAAGA+AGG | - | tig0027935:29814-29833 | Msa1436420:intergenic | 35.0% | |
| TTCGATGAAGATTTACTGGT+AGG | - | tig0027935:29961-29980 | Msa1436420:intergenic | 35.0% | |
| TCGAAAATATGTCGAGTTTG+TGG | + | tig0027935:29976-29995 | Msa1436420:CDS | 35.0% | |
| ! | TGGTGATGAGATTGGATATA+AGG | + | tig0027935:29996-30015 | Msa1436420:CDS | 35.0% |
| TCATAACAAGGCTTACAAAC+AGG | - | tig0027935:30063-30082 | Msa1436420:intergenic | 35.0% | |
| !! | AGCCTTGTTATGAGTATGAA+AGG | + | tig0027935:30070-30089 | Msa1436420:CDS | 35.0% |
| CTCCTTTCATACTCATAACA+AGG | - | tig0027935:30075-30094 | Msa1436420:intergenic | 35.0% | |
| TATGAGTATGAAAGGAGTGA+AGG | + | tig0027935:30078-30097 | Msa1436420:CDS | 35.0% | |
| ATGAGTATGAAAGGAGTGAA+GGG | + | tig0027935:30079-30098 | Msa1436420:CDS | 35.0% | |
| GATGAAGATGAAAACCTTGA+TGG | + | tig0027935:30396-30415 | Msa1436420:CDS | 35.0% | |
| CTTCAAAATCATCTCCATCA+AGG | - | tig0027935:30413-30432 | Msa1436420:intergenic | 35.0% | |
| TCATCATGATGATTCTTGAC+CGG | - | tig0027935:30444-30463 | Msa1436420:intergenic | 35.0% | |
| TTACCACATGATTAACATCG+CGG | - | tig0027935:30479-30498 | Msa1436420:intergenic | 35.0% | |
| !!! | TTGCATACTTTTTCTTCAGC+AGG | + | tig0027935:30639-30658 | Msa1436420:CDS | 35.0% |
| GAGTAGAGAAATGGAAAGTA+AGG | + | tig0027935:30827-30846 | Msa1436420:CDS | 35.0% | |
| AAAGTAAGGCAAGAAAAGAG+AGG | + | tig0027935:30841-30860 | Msa1436420:CDS | 35.0% | |
| GAGAGGTCTATTAAACAAAG+AGG | + | tig0027935:30858-30877 | Msa1436420:CDS | 35.0% | |
| GGTCTATTAAACAAAGAGGA+TGG | + | tig0027935:30862-30881 | Msa1436420:CDS | 35.0% | |
| ATCAGGAAGTGATAACTTAC+AGG | - | tig0027935:30918-30937 | Msa1436420:intergenic | 35.0% | |
| CTTCCTGATTAACAATTTGG+AGG | + | tig0027935:30929-30948 | Msa1436420:intron | 35.0% | |
| CATATGCAGGTGTTAAGATA+CGG | - | tig0027935:31126-31145 | Msa1436420:intergenic | 35.0% | |
| TTACTGATATGAGCCATAGA+GGG | - | tig0027935:31156-31175 | Msa1436420:intergenic | 35.0% | |
| ATTACTGATATGAGCCATAG+AGG | - | tig0027935:31157-31176 | Msa1436420:intergenic | 35.0% | |
| ! | AAATATGGTTTGCACTGTCA+TGG | + | tig0027935:31182-31201 | Msa1436420:CDS | 35.0% |
| TACTTGACCAGTTTCCAAAA+TGG | + | tig0027935:31206-31225 | Msa1436420:CDS | 35.0% | |
| !! | TTGGTAACCATTTTGGAAAC+TGG | - | tig0027935:31216-31235 | Msa1436420:intergenic | 35.0% |
| ATAATAGGCGGTTCTTTCAA+AGG | - | tig0027935:31340-31359 | Msa1436420:intergenic | 35.0% | |
| !! | GTGTTTGCTGTTATAATAGG+CGG | - | tig0027935:31352-31371 | Msa1436420:intergenic | 35.0% |
| AGCATGTAACTTTCTCAACA+GGG | - | tig0027935:31402-31421 | Msa1436420:intergenic | 35.0% | |
| TAGCATGTAACTTTCTCAAC+AGG | - | tig0027935:31403-31422 | Msa1436420:intergenic | 35.0% | |
| ACATGCTATGTATCAGATGA+TGG | + | tig0027935:31415-31434 | Msa1436420:CDS | 35.0% | |
| CTTCTTTCCTTGACAAAAGT+AGG | - | tig0027935:31589-31608 | Msa1436420:intergenic | 35.0% | |
| !! | CTACTTTTGTCAAGGAAAGA+AGG | + | tig0027935:31587-31606 | Msa1436420:CDS | 35.0% |
| CTAGCATAACAGAGAGTTTA+TGG | - | tig0027935:31929-31948 | Msa1436420:intergenic | 35.0% | |
| ! | ATTCTTGTGTGTTTGTTGCA+TGG | + | tig0027935:32010-32029 | Msa1436420:intron | 35.0% |
| AGTGAAAATTAACGCTTTGG+TGG | + | tig0027935:32056-32075 | Msa1436420:CDS | 35.0% | |
| TTATACACTGATATGCCTCA+TGG | + | tig0027935:32347-32366 | Msa1436420:intron | 35.0% | |
| TGTTTAATTCCTGCAGGATT+AGG | + | tig0027935:32536-32555 | Msa1436420:intron | 35.0% | |
| CAATCGAGATTCAACATGAA+TGG | - | tig0027935:32643-32662 | Msa1436420:intergenic | 35.0% | |
| TCACTACATCAACAATAGCA+AGG | + | tig0027935:32666-32685 | Msa1436420:CDS | 35.0% | |
| ! | TTCAACAGACAAGCATTGTA+TGG | + | tig0027935:32974-32993 | Msa1436420:CDS | 35.0% |
| CAACAAAAGCAACACCATTT+AGG | - | tig0027935:33052-33071 | Msa1436420:intergenic | 35.0% | |
| !!! | AAATGGTGTTGCTTTTGTTG+TGG | + | tig0027935:33052-33071 | Msa1436420:CDS | 35.0% |
| TACAAGAAGAAGAAAATGGG+AGG | + | tig0027935:33139-33158 | Msa1436420:CDS | 35.0% | |
| AATCTCTTCGAGATCAAACA+TGG | - | tig0027935:33194-33213 | Msa1436420:intergenic | 35.0% | |
| AGATTGAAGAAGGACTTGAA+GGG | + | tig0027935:33209-33228 | Msa1436420:CDS | 35.0% | |
| GCTTCAACTTTGATGGAAAA+TGG | + | tig0027935:33310-33329 | Msa1436420:CDS | 35.0% | |
| TCAACTTTGATGGAAAATGG+AGG | + | tig0027935:33313-33332 | Msa1436420:CDS | 35.0% | |
| GCCATTCATAACATAAGTTG+TGG | + | tig0027935:33376-33395 | Msa1436420:CDS | 35.0% | |
| GCCACAACTTATGTTATGAA+TGG | - | tig0027935:33380-33399 | Msa1436420:intergenic | 35.0% | |
| ! | GTTTTCCATTACAGATTGGA+TGG | + | tig0027935:33564-33583 | Msa1436420:intron | 35.0% |
| !!! | GTCACAGAAGATATTTTGAC+TGG | + | tig0027935:33599-33618 | Msa1436420:CDS | 35.0% |
| AACCTATCTGACAGATTGAT+AGG | - | tig0027935:33698-33717 | Msa1436420:intergenic | 35.0% | |
| ! | ACTAAAGTATCTAGAGAGGT+TGG | + | tig0027935:33802-33821 | Msa1436420:CDS | 35.0% |
| GATAGATGTGAACTTACAGT+AGG | - | tig0027935:33926-33945 | Msa1436420:intergenic | 35.0% | |
| CTTAACCGTTAAAGATGGAA+AGG | + | tig0027935:33993-34012 | Msa1436420:intron | 35.0% | |
| ! | CTCTAAAGGTCTATTTGGAT+TGG | - | tig0027935:34220-34239 | Msa1436420:intergenic | 35.0% |
| AAACCAAATACTAGCAAGGT+TGG | - | tig0027935:34479-34498 | Msa1436420:intergenic | 35.0% | |
| CCATAAACCAAATACTAGCA+AGG | - | tig0027935:34483-34502 | Msa1436420:intergenic | 35.0% | |
| ! | CCTTGCTAGTATTTGGTTTA+TGG | + | tig0027935:34480-34499 | Msa1436420:CDS | 35.0% |
| ! | CATCTTTTTGCAGTGTTTCA+AGG | + | tig0027935:34616-34635 | Msa1436420:CDS | 35.0% |
| AAGATTATAAGAGTGGTTGG+TGG | - | tig0027935:34754-34773 | Msa1436420:intergenic | 35.0% | |
| ! | GGAAGCTATTCTTTGCATTT+TGG | + | tig0027935:34848-34867 | Msa1436420:CDS | 35.0% |
| TCCTTTCCTTAAAGGTCTTA+TGG | + | tig0027935:34888-34907 | Msa1436420:CDS | 35.0% | |
| ! | CCTTTCCTTAAAGGTCTTAT+GGG | + | tig0027935:34889-34908 | Msa1436420:CDS | 35.0% |
| ! | GTTTTCCCATAAGACCTTTA+AGG | - | tig0027935:34897-34916 | Msa1436420:intergenic | 35.0% |
| GTCTTATGGGAAAACAAAAC+AGG | + | tig0027935:34902-34921 | Msa1436420:CDS | 35.0% | |
| ACACCACATTGTTTGAGAAT+AGG | - | tig0027935:35024-35043 | Msa1436420:intergenic | 35.0% | |
| CCATGATCAGAATGTCTTGT+CGG | + | tig0027935:29851-29870 | Msa1436420:intron | 40.0% | |
| GATGAAGATTTACTGGTAGG+AGG | - | tig0027935:29958-29977 | Msa1436420:intergenic | 40.0% | |
| ! | GGAAAATGGAGAGCTTTTTG+TGG | + | tig0027935:30017-30036 | Msa1436420:CDS | 40.0% |
| ! | TTATAGCGAGTGTTGCATTG+AGG | - | tig0027935:30117-30136 | Msa1436420:intergenic | 40.0% |
| !! | ACTTTTTCTTCAGCAGGAAG+TGG | + | tig0027935:30645-30664 | Msa1436420:CDS | 40.0% |
| ! | CTCTACTGTTTTCCAGTTAC+TGG | + | tig0027935:30751-30770 | Msa1436420:intron | 40.0% |
| TTACTGGCAAGGATTTGGAA+GGG | + | tig0027935:30767-30786 | Msa1436420:CDS | 40.0% | |
| GGCAAGAAAGAGTAGAGAAA+TGG | + | tig0027935:30818-30837 | Msa1436420:CDS | 40.0% | |
| GTGCCTCCAAATTGTTAATC+AGG | - | tig0027935:30935-30954 | Msa1436420:intergenic | 40.0% | |
| CTGAAGCAAGACAACCATTA+TGG | + | tig0027935:31011-31030 | Msa1436420:CDS | 40.0% | |
| ATTGGAACTTTGCGCCATAA+TGG | - | tig0027935:31028-31047 | Msa1436420:intergenic | 40.0% | |
| CAGGTGTTAAGATACGGAAA+CGG | - | tig0027935:31120-31139 | Msa1436420:intergenic | 40.0% | |
| CATATGATGCATACCCTCTA+TGG | + | tig0027935:31140-31159 | Msa1436420:CDS | 40.0% | |
| !! | CGTGTGATTGGTAACCATTT+TGG | - | tig0027935:31223-31242 | Msa1436420:intergenic | 40.0% |
| AAGTAAGTTTCGCGTGTGAT+TGG | - | tig0027935:31235-31254 | Msa1436420:intergenic | 40.0% | |
| AGGGTAGTCAACAGAAAGTA+TGG | - | tig0027935:31383-31402 | Msa1436420:intergenic | 40.0% | |
| ! | AAACTTCTGAGTTTGCTCGA+AGG | + | tig0027935:31470-31489 | Msa1436420:CDS | 40.0% |
| CAAGGAAAGAAGGTCTATGA+AGG | + | tig0027935:31597-31616 | Msa1436420:CDS | 40.0% | |
| ! | AATTAACGCTTTGGTGGCAA+AGG | + | tig0027935:32062-32081 | Msa1436420:CDS | 40.0% |
| TTATGCAAGATGGAACTCCA+TGG | + | tig0027935:32112-32131 | Msa1436420:CDS | 40.0% | |
| AGCATATCACAAGTTGTGTG+TGG | - | tig0027935:32248-32267 | Msa1436420:intergenic | 40.0% | |
| !! | TTGGCTTTGCAGGTATACTT+AGG | + | tig0027935:32372-32391 | Msa1436420:intron | 40.0% |
| ! | CGGGAAATATACACGAGTTT+TGG | - | tig0027935:32435-32454 | Msa1436420:intergenic | 40.0% |
| ! | ATAACCAGGACGTTTTTCAC+GGG | - | tig0027935:32454-32473 | Msa1436420:intergenic | 40.0% |
| ! | GATAACCAGGACGTTTTTCA+CGG | - | tig0027935:32455-32474 | Msa1436420:intergenic | 40.0% |
| TTCTTGTGATGTGGATAACC+AGG | - | tig0027935:32468-32487 | Msa1436420:intergenic | 40.0% | |
| TATCCACATCACAAGAAAGC+TGG | + | tig0027935:32471-32490 | Msa1436420:CDS | 40.0% | |
| ! | TGAACTTACCAAAGCGTTCA+TGG | - | tig0027935:32499-32518 | Msa1436420:intergenic | 40.0% |
| TTCCTGCAGGATTAGGATAT+CGG | + | tig0027935:32543-32562 | Msa1436420:intron | 40.0% | |
| CAATAGCAAGGCTATTAGAG+AGG | + | tig0027935:32678-32697 | Msa1436420:CDS | 40.0% | |
| ! | TTCCTAATGGATCCTCAACT+AGG | + | tig0027935:32709-32728 | Msa1436420:CDS | 40.0% |
| ! | TCCTAATGGATCCTCAACTA+GGG | + | tig0027935:32710-32729 | Msa1436420:CDS | 40.0% |
| ATCAATATGAAAGGGCTCGA+TGG | + | tig0027935:32914-32933 | Msa1436420:CDS | 40.0% | |
| ATTCAAGGTCCAGTGTATGT+CGG | + | tig0027935:32938-32957 | Msa1436420:CDS | 40.0% | |
| TTGTCTGTTGAACACAGTTC+CGG | - | tig0027935:32966-32985 | Msa1436420:intergenic | 40.0% | |
| ! | ATCCACCAGTTTCTGAGAAA+AGG | + | tig0027935:33002-33021 | Msa1436420:CDS | 40.0% |
| !! | TTTGGCCTTTTCTCAGAAAC+TGG | - | tig0027935:33010-33029 | Msa1436420:intergenic | 40.0% |
| CAGCAATCACATGTCATCTT+TGG | - | tig0027935:33028-33047 | Msa1436420:intergenic | 40.0% | |
| CAAAGATGACATGTGATTGC+TGG | + | tig0027935:33026-33045 | Msa1436420:CDS | 40.0% | |
| !!! | GTTGCTTTTGTTGTGGTTCA+AGG | + | tig0027935:33059-33078 | Msa1436420:CDS | 40.0% |
| GATCTCGAAGAGATTGAAGA+AGG | + | tig0027935:33199-33218 | Msa1436420:CDS | 40.0% | |
| GAGATTGAAGAAGGACTTGA+AGG | + | tig0027935:33208-33227 | Msa1436420:CDS | 40.0% | |
| AGGCACAAATACGCAATCAT+TGG | + | tig0027935:33345-33364 | Msa1436420:CDS | 40.0% | |
| CTATGAAGAGAAGACTGACT+GGG | + | tig0027935:33399-33418 | Msa1436420:CDS | 40.0% | |
| TATGAAGAGAAGACTGACTG+GGG | + | tig0027935:33400-33419 | Msa1436420:CDS | 40.0% | |
| TTTGCGTGCAGATGAAACTA+GGG | + | tig0027935:33494-33513 | Msa1436420:intron | 40.0% | |
| CAGTATATTGCATGCCAAAG+AGG | + | tig0027935:33651-33670 | Msa1436420:CDS | 40.0% | |
| CACCTATCAATCTGTCAGAT+AGG | + | tig0027935:33693-33712 | Msa1436420:CDS | 40.0% | |
| AGCAAAGGGATTGAAGTGAA+TGG | - | tig0027935:33851-33870 | Msa1436420:intergenic | 40.0% | |
| TTGTGCAGTATGCTAGCAAA+GGG | - | tig0027935:33865-33884 | Msa1436420:intergenic | 40.0% | |
| ATTGTGCAGTATGCTAGCAA+AGG | - | tig0027935:33866-33885 | Msa1436420:intergenic | 40.0% | |
| TGTCGCCTTTCCATCTTTAA+CGG | - | tig0027935:34001-34020 | Msa1436420:intergenic | 40.0% | |
| GACACATAACACACCCTATT+TGG | + | tig0027935:34017-34036 | Msa1436420:intron | 40.0% | |
| TGACCAACCTTGCTAGTATT+TGG | + | tig0027935:34473-34492 | Msa1436420:CDS | 40.0% | |
| ! | GAGTACACCGGTTAAAATGA+TGG | - | tig0027935:34518-34537 | Msa1436420:intergenic | 40.0% |
| GTCTCTGATGCTATTAACAG+TGG | + | tig0027935:34799-34818 | Msa1436420:CDS | 40.0% | |
| GATGCTATTAACAGTGGTAG+TGG | + | tig0027935:34805-34824 | Msa1436420:CDS | 40.0% | |
| !! | TTAACAGTGGTAGTGGTTCA+TGG | + | tig0027935:34812-34831 | Msa1436420:CDS | 40.0% |
| !! | TAACAGTGGTAGTGGTTCAT+GGG | + | tig0027935:34813-34832 | Msa1436420:CDS | 40.0% |
| ! | GTTCATGGGGACCTTTATTT+GGG | + | tig0027935:34827-34846 | Msa1436420:CDS | 40.0% |
| ! | CCCATAAGACCTTTAAGGAA+AGG | - | tig0027935:34892-34911 | Msa1436420:intergenic | 40.0% |
| AAACAGGACTCCTACTATTG+TGG | + | tig0027935:34918-34937 | Msa1436420:CDS | 40.0% | |
| CTCCTACTATTGTGGTACTT+TGG | + | tig0027935:34926-34945 | Msa1436420:CDS | 40.0% | |
| ! | GACCAAAGTACCACAATAGT+AGG | - | tig0027935:34931-34950 | Msa1436420:intergenic | 40.0% |
| ! | GGTACTTTGGTCAATCCTTT+TGG | + | tig0027935:34939-34958 | Msa1436420:CDS | 40.0% |
| ! | AGAATAGGACCAGTTTGCTT+AGG | - | tig0027935:35009-35028 | Msa1436420:intergenic | 40.0% |
| GGTCCTATTCTCAAACAATG+TGG | + | tig0027935:35018-35037 | Msa1436420:CDS | 40.0% | |
| ATGCTGAGAAGTTGTGAAAG+AGG | + | tig0027935:35047-35066 | Msa1436420:exon | 40.0% | |
| CCGACAAGACATTCTGATCA+TGG | - | tig0027935:29854-29873 | Msa1436420:intergenic | 45.0% | |
| GAAGATTTACTGGTAGGAGG+AGG | - | tig0027935:29955-29974 | Msa1436420:intergenic | 45.0% | |
| ! | CGAGTTTGTGGTGATGAGAT+TGG | + | tig0027935:29988-30007 | Msa1436420:CDS | 45.0% |
| ACTCGCTATAAGCGCCATAA+AGG | + | tig0027935:30126-30145 | Msa1436420:CDS | 45.0% | |
| TCTTCATCTCCAACCACTCT+TGG | - | tig0027935:30384-30403 | Msa1436420:intergenic | 45.0% | |
| CATGATTAACATCGCGGTTC+TGG | - | tig0027935:30473-30492 | Msa1436420:intergenic | 45.0% | |
| GAACCGCGATGTTAATCATG+TGG | + | tig0027935:30473-30492 | Msa1436420:CDS | 45.0% | |
| ! | CTGTTTTCCAGTTACTGGCA+AGG | + | tig0027935:30756-30775 | Msa1436420:intron | 45.0% |
| TCCAGTTACTGGCAAGGATT+TGG | + | tig0027935:30762-30781 | Msa1436420:intron | 45.0% | |
| TCCAAATCCTTGCCAGTAAC+TGG | - | tig0027935:30766-30785 | Msa1436420:intergenic | 45.0% | |
| GTTACTGGCAAGGATTTGGA+AGG | + | tig0027935:30766-30785 | Msa1436420:intron | 45.0% | |
| TACTGGCAAGGATTTGGAAG+GGG | + | tig0027935:30768-30787 | Msa1436420:CDS | 45.0% | |
| GAGGATGGTAAAGAAGACCA+AGG | + | tig0027935:30877-30896 | Msa1436420:CDS | 45.0% | |
| GGTACTCATCTTCTTCACCT+TGG | - | tig0027935:30897-30916 | Msa1436420:intergenic | 45.0% | |
| GGAAACGGAAGAAGAATGCT+AGG | - | tig0027935:31105-31124 | Msa1436420:intergenic | 45.0% | |
| ! | AGAGGGTATGCATCATATGC+AGG | - | tig0027935:31139-31158 | Msa1436420:intergenic | 45.0% |
| AAACATCAACAGGCGAAAGC+TGG | - | tig0027935:31300-31319 | Msa1436420:intergenic | 45.0% | |
| ! | TTCTGAGTTTGCTCGAAGGT+GGG | + | tig0027935:31474-31493 | Msa1436420:CDS | 45.0% |
| AAGTAATACTCAGGTGCCCT+TGG | - | tig0027935:31529-31548 | Msa1436420:intergenic | 45.0% | |
| !! | GGTTGAGCCTACTTTTGTCA+AGG | + | tig0027935:31579-31598 | Msa1436420:CDS | 45.0% |
| AAGTCAATCGATCAGGCCTA+TGG | + | tig0027935:31822-31841 | Msa1436420:intron | 45.0% | |
| CTCTCATAGACACTAAGTGC+TGG | - | tig0027935:31980-31999 | Msa1436420:intergenic | 45.0% | |
| !! | AAAGGCTCTGAAGAAACCTG+AGG | + | tig0027935:32080-32099 | Msa1436420:CDS | 45.0% |
| ! | TGATCACGAGTGTTGTTACC+AGG | - | tig0027935:32138-32157 | Msa1436420:intergenic | 45.0% |
| AACAACACTCGTGATCATCC+AGG | + | tig0027935:32141-32160 | Msa1436420:CDS | 45.0% | |
| ACAACACTCGTGATCATCCA+GGG | + | tig0027935:32142-32161 | Msa1436420:CDS | 45.0% | |
| TGATCATCCAGGGATGATTC+AGG | + | tig0027935:32152-32171 | Msa1436420:CDS | 45.0% | |
| ! | ATCCAGGGATGATTCAGGTT+TGG | + | tig0027935:32157-32176 | Msa1436420:intron | 45.0% |
| ATCCAAACCTGAATCATCCC+TGG | - | tig0027935:32162-32181 | Msa1436420:intergenic | 45.0% | |
| ACTGATATGCCTCATGGACT+TGG | + | tig0027935:32353-32372 | Msa1436420:intron | 45.0% | |
| ! | CAGGTATACTTAGGAAGTGC+TGG | + | tig0027935:32381-32400 | Msa1436420:intron | 45.0% |
| ATTTCCCGTGAAAAACGTCC+TGG | + | tig0027935:32447-32466 | Msa1436420:CDS | 45.0% | |
| TTCCGATATCCTAATCCTGC+AGG | - | tig0027935:32548-32567 | Msa1436420:intergenic | 45.0% | |
| ! | AGGATCCATTAGGAAGCACA+TGG | - | tig0027935:32704-32723 | Msa1436420:intergenic | 45.0% |
| TCCCTAGTTGAGGATCCATT+AGG | - | tig0027935:32714-32733 | Msa1436420:intergenic | 45.0% | |
| CAGAGTTTCTTCCCTAGTTG+AGG | - | tig0027935:32724-32743 | Msa1436420:intergenic | 45.0% | |
| AAAGGGCTCGATGGTATTCA+AGG | + | tig0027935:32923-32942 | Msa1436420:CDS | 45.0% | |
| ! | CATGTGATTGCTGGCCTAAA+TGG | + | tig0027935:33035-33054 | Msa1436420:CDS | 45.0% |
| GAAAATGGAGGACTTCCTGA+AGG | + | tig0027935:33325-33344 | Msa1436420:CDS | 45.0% | |
| GATTGCGTATTTGTGCCTTC+AGG | - | tig0027935:33343-33362 | Msa1436420:intergenic | 45.0% | |
| GCTATGAAGAGAAGACTGAC+TGG | + | tig0027935:33398-33417 | Msa1436420:CDS | 45.0% | |
| CTAGTTTCATCTGCACGCAA+AGG | - | tig0027935:33495-33514 | Msa1436420:intergenic | 45.0% | |
| CTTTGCGTGCAGATGAAACT+AGG | + | tig0027935:33493-33512 | Msa1436420:intron | 45.0% | |
| ! | GGATTTAAGATGCACTGCAG+AGG | + | tig0027935:33620-33639 | Msa1436420:CDS | 45.0% |
| TTAAGATGCACTGCAGAGGA+TGG | + | tig0027935:33624-33643 | Msa1436420:CDS | 45.0% | |
| !! | GTTGCACCAAGTTCTGAGAT+GGG | + | tig0027935:33715-33734 | Msa1436420:CDS | 45.0% |
| CTAAAGCCCATCTCAGAACT+TGG | - | tig0027935:33724-33743 | Msa1436420:intergenic | 45.0% | |
| !! | CAAGTTCTGAGATGGGCTTT+AGG | + | tig0027935:33722-33741 | Msa1436420:CDS | 45.0% |
| AACCATACCACAACGGACAA+TGG | - | tig0027935:33772-33791 | Msa1436420:intergenic | 45.0% | |
| TGTCCGTTGTGGTATGGTTA+TGG | + | tig0027935:33773-33792 | Msa1436420:CDS | 45.0% | |
| CCTCCATAACCATACCACAA+CGG | - | tig0027935:33779-33798 | Msa1436420:intergenic | 45.0% | |
| AATGTCTATGGCCGCAATCT+AGG | + | tig0027935:34248-34267 | Msa1436420:intron | 45.0% | |
| TGATACTGCGACCTAGATTG+CGG | - | tig0027935:34262-34281 | Msa1436420:intergenic | 45.0% | |
| CAATCTAGGTCGCAGTATCA+AGG | + | tig0027935:34262-34281 | Msa1436420:intron | 45.0% | |
| GTTAGAGTAGAGCAACCTTG+AGG | - | tig0027935:34317-34336 | Msa1436420:intergenic | 45.0% | |
| GTGGAGAAACGAGCAATTCT+GGG | + | tig0027935:34573-34592 | Msa1436420:CDS | 45.0% | |
| AACGAGCAATTCTGGGTGAT+TGG | + | tig0027935:34580-34599 | Msa1436420:CDS | 45.0% | |
| GCAGCAGATGATGCTGAATT+CGG | + | tig0027935:34691-34710 | Msa1436420:CDS | 45.0% | |
| AACATTGTTGGCGTTGTTGC+TGG | + | tig0027935:34775-34794 | Msa1436420:CDS | 45.0% | |
| !! | AACAGTGGTAGTGGTTCATG+GGG | + | tig0027935:34814-34833 | Msa1436420:CDS | 45.0% |
| GGTTCATGGGGACCTTTATT+TGG | + | tig0027935:34826-34845 | Msa1436420:CDS | 45.0% | |
| ! | CCAGTTTGCTTAGGCAAGAA+AGG | - | tig0027935:35000-35019 | Msa1436420:intergenic | 45.0% |
| CCTTTCTTGCCTAAGCAAAC+TGG | + | tig0027935:34997-35016 | Msa1436420:CDS | 45.0% | |
| ! | CTTTGGCTTCTTGCCATCCA+TGG | + | tig0027935:29710-29729 | Msa1436420:exon | 50.0% |
| ATGGTGTTTGTGGCCATGGA+TGG | - | tig0027935:29726-29745 | Msa1436420:intergenic | 50.0% | |
| ATCCATGGCCACAAACACCA+TGG | + | tig0027935:29725-29744 | Msa1436420:exon | 50.0% | |
| ! | GATGATGATGACTTCCCTGC+AGG | + | tig0027935:30354-30373 | Msa1436420:intron | 50.0% |
| TCAACAGGCGAAAGCTGGTT+TGG | - | tig0027935:31295-31314 | Msa1436420:intergenic | 50.0% | |
| ! | CTTCTGAGTTTGCTCGAAGG+TGG | + | tig0027935:31473-31492 | Msa1436420:CDS | 50.0% |
| !! | GCTCTGAAGAAACCTGAGGA+GGG | + | tig0027935:32084-32103 | Msa1436420:CDS | 50.0% |
| TGAAGAAACCTGAGGAGGGT+TGG | + | tig0027935:32088-32107 | Msa1436420:CDS | 50.0% | |
| GAAGAAACCTGAGGAGGGTT+GGG | + | tig0027935:32089-32108 | Msa1436420:CDS | 50.0% | |
| GAGGGTTGGGTTATGCAAGA+TGG | + | tig0027935:32102-32121 | Msa1436420:CDS | 50.0% | |
| GCACCAGCTTTCTTGTGATG+TGG | - | tig0027935:32477-32496 | Msa1436420:intergenic | 50.0% | |
| AGAGGCCATGTGCTTCCTAA+TGG | + | tig0027935:32696-32715 | Msa1436420:CDS | 50.0% | |
| ! | GGCCTTTTCTCAGAAACTGG+TGG | - | tig0027935:33007-33026 | Msa1436420:intergenic | 50.0% |
| ! | AGAAGGACTTGAAGGGTACG+AGG | + | tig0027935:33216-33235 | Msa1436420:CDS | 50.0% |
| !! | GAAGCGATTTGGTCAGTCTC+CGG | + | tig0027935:33279-33298 | Msa1436420:CDS | 50.0% |
| GAAGACTGACTGGGGAAAAG+AGG | + | tig0027935:33408-33427 | Msa1436420:CDS | 50.0% | |
| CCAAAGAGGCCTGCTTTCAA+GGG | + | tig0027935:33665-33684 | Msa1436420:CDS | 50.0% | |
| CAAAGAGGCCTGCTTTCAAG+GGG | + | tig0027935:33666-33685 | Msa1436420:CDS | 50.0% | |
| !! | GGTTGCACCAAGTTCTGAGA+TGG | + | tig0027935:33714-33733 | Msa1436420:CDS | 50.0% |
| ACAACGGACAATGGCGACTA+AGG | - | tig0027935:33763-33782 | Msa1436420:intergenic | 50.0% | |
| TTAGTCGCCATTGTCCGTTG+TGG | + | tig0027935:33762-33781 | Msa1436420:CDS | 50.0% | |
| CCGTTGTGGTATGGTTATGG+AGG | + | tig0027935:33776-33795 | Msa1436420:CDS | 50.0% | |
| GGTGGAGAAACGAGCAATTC+TGG | + | tig0027935:34572-34591 | Msa1436420:CDS | 50.0% | |
| GAGCAATTCTGGGTGATTGG+AGG | + | tig0027935:34583-34602 | Msa1436420:CDS | 50.0% | |
| AGCCATGGTGTTTGTGGCCA+TGG | - | tig0027935:29730-29749 | Msa1436420:intergenic | 55.0% | |
| ATGGCCACAAACACCATGGC+TGG | + | tig0027935:29729-29748 | Msa1436420:CDS | 55.0% | |
| CAAGCCAGCCATGGTGTTTG+TGG | - | tig0027935:29736-29755 | Msa1436420:intergenic | 55.0% | |
| !! | ACCATGGCTGGCTTGATCAC+CGG | + | tig0027935:29741-29760 | Msa1436420:CDS | 55.0% |
| CCACTCTTGGACAACCTGCA+GGG | - | tig0027935:30371-30390 | Msa1436420:intergenic | 55.0% | |
| ACCACTCTTGGACAACCTGC+AGG | - | tig0027935:30372-30391 | Msa1436420:intergenic | 55.0% | |
| GCAGGTTGTCCAAGAGTGGT+TGG | + | tig0027935:30372-30391 | Msa1436420:intron | 55.0% | |
| !! | GGCTCTGAAGAAACCTGAGG+AGG | + | tig0027935:32083-32102 | Msa1436420:CDS | 55.0% |
| TGCATAACCCAACCCTCCTC+AGG | - | tig0027935:32099-32118 | Msa1436420:intergenic | 55.0% | |
| CAAGATGGAACTCCATGGCC+TGG | + | tig0027935:32117-32136 | Msa1436420:CDS | 55.0% | |
| ! | CGAGTGTTGTTACCAGGCCA+TGG | - | tig0027935:32132-32151 | Msa1436420:intergenic | 55.0% |
| CCTGCAAAGCCAAGTCCATG+AGG | - | tig0027935:32365-32384 | Msa1436420:intergenic | 55.0% | |
| !! | CCTCATGGACTTGGCTTTGC+AGG | + | tig0027935:32362-32381 | Msa1436420:intron | 55.0% |
| !! | AAGTGCTGGTGCACTAGACG+TGG | + | tig0027935:32395-32414 | Msa1436420:CDS | 55.0% |
| TGCACTAGACGTGGAAGGCA+AGG | + | tig0027935:32404-32423 | Msa1436420:CDS | 55.0% | |
| !! | AGCTGGTGCCATGAACGCTT+TGG | + | tig0027935:32488-32507 | Msa1436420:CDS | 55.0% |
| GGTCCAGTGTATGTCGGTAC+CGG | + | tig0027935:32944-32963 | Msa1436420:CDS | 55.0% | |
| !! | GTTCCGGTACCGACATACAC+TGG | - | tig0027935:32950-32969 | Msa1436420:intergenic | 55.0% |
| GCCAAAGAGGCCTGCTTTCA+AGG | + | tig0027935:33664-33683 | Msa1436420:CDS | 55.0% | |
| CCCTTGAAAGCAGGCCTCTT+TGG | - | tig0027935:33668-33687 | Msa1436420:intergenic | 55.0% | |
| CGCCATTGTCCGTTGTGGTA+TGG | + | tig0027935:33767-33786 | Msa1436420:CDS | 55.0% | |
| CCTGTCAGAAGACACACAGC+TGG | - | tig0027935:33890-33909 | Msa1436420:intergenic | 55.0% | |
| CCAGCTGTGTGTCTTCTGAC+AGG | + | tig0027935:33887-33906 | Msa1436420:CDS | 55.0% | |
| GTAACCGCAACGCAACCTCA+AGG | + | tig0027935:34299-34318 | Msa1436420:intron | 55.0% | |
| GCAACCTTGAGGTTGCGTTG+CGG | - | tig0027935:34306-34325 | Msa1436420:intergenic | 55.0% | |
| CCATCGAAGCTCGAGTACAC+CGG | - | tig0027935:34530-34549 | Msa1436420:intergenic | 55.0% | |
| GTACTCGAGCTTCGATGGAG+TGG | + | tig0027935:34532-34551 | Msa1436420:CDS | 55.0% | |
| GTGGAGTTGCGATCGAAGAC+TGG | + | tig0027935:34551-34570 | Msa1436420:CDS | 55.0% | |
| GAGTTGCGATCGAAGACTGG+TGG | + | tig0027935:34554-34573 | Msa1436420:CDS | 55.0% | |
| CCCTGCAGGTTGTCCAAGAG+TGG | + | tig0027935:30368-30387 | Msa1436420:intron | 60.0% | |
| GCTGGTGCACTAGACGTGGA+AGG | + | tig0027935:32399-32418 | Msa1436420:CDS | 60.0% | |
| GGTGCAGACCCCTTGAAAGC+AGG | - | tig0027935:33677-33696 | Msa1436420:intergenic | 60.0% | |
| CCGGTGTACTCGAGCTTCGA+TGG | + | tig0027935:34527-34546 | Msa1436420:CDS | 60.0% | |
| GCCGGTGATCAAGCCAGCCA+TGG | - | tig0027935:29745-29764 | Msa1436420:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0027935 | gene | 29644 | 35345 | 29644 | ID=Msa1436420;Name=Msa1436420 |
| tig0027935 | mRNA | 29644 | 35345 | 29644 | ID=Msa1436420-mRNA-1;Parent=Msa1436420;Name=Msa1436420-mRNA-1;_AED=0.06;_eAED=0.06;_QI=85|1|1|1|1|1|12|292|1044 |
| tig0027935 | exon | 29644 | 29797 | 29644 | ID=Msa1436420-mRNA-1:exon:10216;Parent=Msa1436420-mRNA-1 |
| tig0027935 | exon | 29946 | 30147 | 29946 | ID=Msa1436420-mRNA-1:exon:10217;Parent=Msa1436420-mRNA-1 |
| tig0027935 | exon | 30376 | 30494 | 30376 | ID=Msa1436420-mRNA-1:exon:10218;Parent=Msa1436420-mRNA-1 |
| tig0027935 | exon | 30612 | 30666 | 30612 | ID=Msa1436420-mRNA-1:exon:10219;Parent=Msa1436420-mRNA-1 |
| tig0027935 | exon | 30767 | 30917 | 30767 | ID=Msa1436420-mRNA-1:exon:10220;Parent=Msa1436420-mRNA-1 |
| tig0027935 | exon | 31006 | 31618 | 31006 | ID=Msa1436420-mRNA-1:exon:10221;Parent=Msa1436420-mRNA-1 |
| tig0027935 | exon | 32036 | 32173 | 32036 | ID=Msa1436420-mRNA-1:exon:10222;Parent=Msa1436420-mRNA-1 |
| tig0027935 | exon | 32384 | 32509 | 32384 | ID=Msa1436420-mRNA-1:exon:10223;Parent=Msa1436420-mRNA-1 |
| tig0027935 | exon | 32610 | 32822 | 32610 | ID=Msa1436420-mRNA-1:exon:10224;Parent=Msa1436420-mRNA-1 |
| tig0027935 | exon | 32914 | 33429 | 32914 | ID=Msa1436420-mRNA-1:exon:10225;Parent=Msa1436420-mRNA-1 |
| tig0027935 | exon | 33578 | 33928 | 33578 | ID=Msa1436420-mRNA-1:exon:10226;Parent=Msa1436420-mRNA-1 |
| tig0027935 | exon | 34472 | 35345 | 34472 | ID=Msa1436420-mRNA-1:exon:10227;Parent=Msa1436420-mRNA-1 |
| tig0027935 | five_prime_UTR | 29644 | 29728 | 29644 | ID=Msa1436420-mRNA-1:five_prime_utr;Parent=Msa1436420-mRNA-1 |
| tig0027935 | CDS | 29729 | 29797 | 29729 | ID=Msa1436420-mRNA-1:cds;Parent=Msa1436420-mRNA-1 |
| tig0027935 | CDS | 29946 | 30147 | 29946 | ID=Msa1436420-mRNA-1:cds;Parent=Msa1436420-mRNA-1 |
| tig0027935 | CDS | 30376 | 30494 | 30376 | ID=Msa1436420-mRNA-1:cds;Parent=Msa1436420-mRNA-1 |
| tig0027935 | CDS | 30612 | 30666 | 30612 | ID=Msa1436420-mRNA-1:cds;Parent=Msa1436420-mRNA-1 |
| tig0027935 | CDS | 30767 | 30917 | 30767 | ID=Msa1436420-mRNA-1:cds;Parent=Msa1436420-mRNA-1 |
| tig0027935 | CDS | 31006 | 31618 | 31006 | ID=Msa1436420-mRNA-1:cds;Parent=Msa1436420-mRNA-1 |
| tig0027935 | CDS | 32036 | 32173 | 32036 | ID=Msa1436420-mRNA-1:cds;Parent=Msa1436420-mRNA-1 |
| tig0027935 | CDS | 32384 | 32509 | 32384 | ID=Msa1436420-mRNA-1:cds;Parent=Msa1436420-mRNA-1 |
| tig0027935 | CDS | 32610 | 32822 | 32610 | ID=Msa1436420-mRNA-1:cds;Parent=Msa1436420-mRNA-1 |
| tig0027935 | CDS | 32914 | 33429 | 32914 | ID=Msa1436420-mRNA-1:cds;Parent=Msa1436420-mRNA-1 |
| tig0027935 | CDS | 33578 | 33928 | 33578 | ID=Msa1436420-mRNA-1:cds;Parent=Msa1436420-mRNA-1 |
| tig0027935 | CDS | 34472 | 35053 | 34472 | ID=Msa1436420-mRNA-1:cds;Parent=Msa1436420-mRNA-1 |
| tig0027935 | three_prime_UTR | 35054 | 35345 | 35054 | ID=Msa1436420-mRNA-1:three_prime_utr;Parent=Msa1436420-mRNA-1 |
| Gene Sequence |
| Protein sequence |
