AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0283440

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0283440 MtrunA17_Chr2g0298891 94.350 354 17 1 1 354 1 351 0.0 650
Msa0283440 MtrunA17_Chr4g0071581 73.502 317 78 3 40 352 24 338 1.47e-162 458
Msa0283440 MtrunA17_Chr4g0071581 35.152 165 104 2 106 269 20 182 4.72e-13 69.3
Msa0283440 MtrunA17_Chr4g0058541 47.303 241 126 1 47 287 208 447 1.12e-58 197
Msa0283440 MtrunA17_Chr4g0058541 30.061 163 111 2 43 203 273 434 1.19e-11 65.9
Msa0283440 MtrunA17_Chr3g0116991 45.528 246 130 2 42 287 203 444 3.13e-55 188
Msa0283440 MtrunA17_Chr5g0412701 43.548 248 139 1 40 287 148 394 6.10e-50 173
Msa0283440 MtrunA17_Chr5g0407461 40.167 239 141 2 47 285 305 541 1.23e-42 156
Msa0283440 MtrunA17_Chr5g0407461 40.351 171 99 2 99 269 264 431 2.71e-27 112
Msa0283440 MtrunA17_Chr8g0370111 39.773 264 152 3 47 305 294 555 2.14e-42 155
Msa0283440 MtrunA17_Chr4g0054721 38.346 266 139 3 44 286 219 482 1.21e-40 149
Msa0283440 MtrunA17_Chr4g0054721 38.012 171 103 2 99 269 204 371 1.60e-22 98.6
Msa0283440 MtrunA17_Chr8g0363851 35.294 187 117 4 75 260 592 775 1.30e-17 84.7
Msa0283440 MtrunA17_Chr8g0363851 33.173 208 134 5 80 286 644 847 1.91e-15 77.8
Msa0283440 MtrunA17_Chr8g0363851 32.353 204 122 7 47 237 703 903 2.20e-11 65.5
Msa0283440 MtrunA17_Chr8g0357151 35.632 261 155 12 19 269 245 502 1.00e-16 81.6
Msa0283440 MtrunA17_Chr8g0357151 36.574 216 125 11 63 269 194 406 6.26e-14 73.2
Msa0283440 MtrunA17_Chr8g0357151 33.597 253 157 11 19 263 317 566 2.77e-13 71.2
Msa0283440 MtrunA17_Chr8g0357151 34.529 223 134 11 56 269 115 334 2.93e-12 68.2
Msa0283440 MtrunA17_Chr8g0363891 36.916 214 119 9 54 264 162 362 4.54e-16 79.7
Msa0283440 MtrunA17_Chr8g0363891 34.409 186 117 5 77 260 129 311 1.66e-13 71.6
Msa0283440 MtrunA17_Chr8g0363891 33.333 189 120 6 77 263 82 266 1.04e-11 66.2
Msa0283440 MtrunA17_Chr8g0363891 36.652 221 114 12 51 263 90 292 6.42e-11 63.9
Msa0283440 MtrunA17_Chr3g0086371 30.804 224 124 6 46 266 24 219 1.08e-15 76.3
Msa0283440 MtrunA17_Chr3g0086371 27.094 203 122 3 72 274 27 203 4.53e-14 71.6
Msa0283440 MtrunA17_Chr8g0357171 36.620 213 122 12 70 273 166 374 2.58e-15 77.4
Msa0283440 MtrunA17_Chr8g0357171 31.304 230 141 11 57 272 201 427 6.59e-11 63.9
Msa0283440 MtrunA17_Chr1g0165141 29.368 269 171 13 56 310 237 500 3.88e-15 77.0
Msa0283440 MtrunA17_Chr1g0165141 28.571 224 146 8 49 267 94 308 3.11e-12 68.2
Msa0283440 MtrunA17_Chr1g0165141 29.960 247 162 10 57 296 190 432 2.43e-11 65.5
Msa0283440 MtrunA17_Chr2g0317831 31.280 211 140 5 63 272 67 273 1.22e-14 75.1
Msa0283440 MtrunA17_Chr2g0317831 27.347 245 149 5 47 288 364 582 1.92e-13 71.6
Msa0283440 MtrunA17_Chr4g0012841 35.071 211 126 11 70 272 150 357 2.32e-14 74.3
Msa0283440 MtrunA17_Chr8g0357191 36.321 212 125 10 63 267 254 462 8.31e-14 72.8
Msa0283440 MtrunA17_Chr8g0357191 32.927 246 131 12 56 269 127 370 1.89e-13 71.6
Msa0283440 MtrunA17_Chr7g0215641 36.022 186 107 8 90 267 90 271 1.19e-13 72.4
Msa0283440 MtrunA17_Chr2g0304481 34.500 200 124 7 55 249 411 608 2.86e-13 71.2
Msa0283440 MtrunA17_Chr1g0165221 31.507 219 142 8 56 268 213 429 4.08e-13 70.9
Msa0283440 MtrunA17_Chr1g0165221 31.429 210 136 8 64 267 101 308 1.43e-11 65.9
Msa0283440 MtrunA17_Chr7g0232211 31.707 287 135 13 67 295 76 359 7.37e-13 70.1
Msa0283440 MtrunA17_Chr8g0362431 30.542 203 129 7 70 265 151 348 8.55e-13 69.7
Msa0283440 MtrunA17_Chr4g0073641 31.925 213 132 8 67 267 350 561 1.07e-12 69.3
Msa0283440 MtrunA17_Chr2g0296601 33.333 207 127 11 69 267 601 804 1.14e-12 69.3
Msa0283440 MtrunA17_Chr2g0296591 33.333 207 127 11 69 267 601 804 1.50e-12 68.9
Msa0283440 MtrunA17_Chr1g0203251 25.828 302 185 8 19 284 405 703 4.43e-12 67.8
Msa0283440 MtrunA17_Chr3g0105881 28.571 203 135 5 73 269 136 334 5.10e-12 66.6
Msa0283440 MtrunA17_Chr1g0165901 33.173 208 129 9 70 269 290 495 6.97e-12 67.0
Msa0283440 MtrunA17_Chr7g0217081 35.455 220 128 11 57 267 127 341 7.43e-12 66.6
Msa0283440 MtrunA17_Chr5g0446871 37.736 159 91 8 63 215 281 437 7.73e-12 67.0
Msa0283440 MtrunA17_Chr8g0354031 39.355 155 87 7 67 215 206 359 1.21e-11 66.2
Msa0283440 MtrunA17_Chr8g0363111 35.443 158 96 6 63 215 440 596 1.43e-11 65.9
Msa0283440 MtrunA17_Chr8g0363111 30.000 220 133 9 70 272 175 390 8.25e-11 63.5
Msa0283440 MtrunA17_Chr8g0362931 32.353 238 143 11 46 267 186 421 1.46e-11 65.9
Msa0283440 MtrunA17_Chr7g0244931 32.420 219 134 8 57 265 337 551 1.64e-11 65.9
Msa0283440 MtrunA17_Chr1g0165211 35.052 194 117 9 67 254 603 793 1.67e-11 65.9
Msa0283440 MtrunA17_Chr1g0165211 29.646 226 149 10 50 268 322 544 3.11e-11 65.1
Msa0283440 MtrunA17_Chr3g0128731 30.769 221 139 9 56 265 269 486 1.86e-11 65.5
Msa0283440 MtrunA17_Chr5g0439291 33.014 209 113 8 63 268 132 316 1.90e-11 65.5
Msa0283440 MtrunA17_Chr3g0089961 45.349 86 46 1 174 259 595 679 2.65e-11 65.1
Msa0283440 MtrunA17_Chr3g0089251 41.176 102 58 2 160 260 606 706 2.75e-11 65.1
Msa0283440 MtrunA17_Chr7g0232451 34.300 207 128 8 67 267 120 324 2.91e-11 65.1
Msa0283440 MtrunA17_Chr1g0165191 34.536 194 118 9 67 254 583 773 4.25e-11 64.7
Msa0283440 MtrunA17_Chr7g0215681 35.870 184 110 8 90 267 110 291 4.74e-11 64.3
Msa0283440 MtrunA17_Chr7g0232131 30.450 289 139 14 67 296 85 370 5.04e-11 64.3
Msa0283440 MtrunA17_Chr3g0089501 45.977 87 46 1 174 260 590 675 5.37e-11 64.3
Msa0283440 MtrunA17_Chr3g0089601 45.977 87 46 1 174 260 590 675 5.75e-11 63.9
Msa0283440 MtrunA17_Chr5g0436901 35.567 194 114 11 80 265 67 257 6.43e-11 63.2
Msa0283440 MtrunA17_Chr2g0312651 32.068 237 135 11 67 293 509 729 6.56e-11 63.9
Msa0283440 MtrunA17_Chr7g0241921 31.336 217 140 9 56 265 371 585 6.86e-11 63.9
Msa0283440 MtrunA17_Chr1g0165951 32.759 232 145 11 43 266 98 326 7.31e-11 63.9
Msa0283440 MtrunA17_Chr6g0487031 28.340 247 126 9 56 274 64 287 8.30e-11 63.5
Msa0283440 MtrunA17_Chr1g0176301 34.756 164 100 7 67 225 200 361 8.74e-11 63.5
Msa0283440 MtrunA17_Chr4g0035444 29.353 201 134 8 69 264 411 608 9.06e-11 63.2
Msa0283440 MtrunA17_Chr2g0319851 26.384 307 184 13 50 322 623 921 9.09e-11 63.5
Msa0283440 MtrunA17_Chr7g0215671 28.235 255 146 8 18 267 40 262 9.62e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0283440 AT2G19330.1 64.465 318 108 2 40 352 58 375 1.25e-140 404
Msa0283440 AT4G29880.1 62.264 318 115 2 40 352 51 368 1.19e-126 368
Msa0283440 AT4G26050.1 59.130 345 124 6 24 351 29 373 1.84e-125 366
Msa0283440 AT3G11330.1 48.770 244 124 1 44 287 200 442 5.46e-58 196
Msa0283440 AT3G11330.1 32.919 161 105 2 43 201 268 427 5.08e-12 67.4
Msa0283440 AT5G05850.1 48.000 250 129 1 41 290 203 451 8.35e-57 193
Msa0283440 AT3G26500.1 40.856 257 139 2 44 300 162 405 1.42e-51 178
Msa0283440 AT1G12970.1 40.467 257 140 2 44 300 163 406 3.25e-49 172
Msa0283440 AT4G35470.1 38.168 262 157 3 47 305 274 533 1.74e-42 155
Msa0283440 AT4G35470.1 39.196 199 107 3 98 285 232 427 1.48e-22 99.4
Msa0283440 AT2G17440.1 39.924 263 152 3 47 305 258 518 6.89e-40 148
Msa0283440 AT4G35470.2 40.171 234 138 2 47 280 274 505 1.33e-39 147
Msa0283440 AT4G35470.2 39.196 199 107 3 98 285 232 427 1.43e-22 99.4
Msa0283440 AT4G35470.2 32.000 175 115 3 43 215 316 488 2.06e-15 77.8
Msa0283440 AT3G15410.1 35.071 211 128 5 63 270 66 270 3.24e-18 86.3
Msa0283440 AT3G15410.1 35.122 205 128 4 69 272 49 249 7.68e-18 85.1
Msa0283440 AT3G15410.1 28.723 282 166 6 46 298 72 347 6.38e-16 79.3
Msa0283440 AT3G15410.1 24.113 282 175 6 20 288 326 581 2.96e-14 74.3
Msa0283440 AT3G15410.2 35.071 211 128 5 63 270 72 276 3.45e-18 86.3
Msa0283440 AT3G15410.2 35.122 205 128 4 69 272 55 255 8.41e-18 85.1
Msa0283440 AT3G15410.2 28.723 282 166 6 46 298 78 353 6.14e-16 79.3
Msa0283440 AT3G15410.2 24.113 282 175 6 20 288 332 587 2.17e-14 74.7
Msa0283440 AT2G30105.1 34.211 190 109 5 101 278 141 326 2.51e-16 79.7
Msa0283440 AT2G30105.1 41.964 112 63 2 70 181 207 316 9.01e-15 75.1
Msa0283440 AT4G28490.1 33.945 218 127 12 45 247 87 302 2.22e-14 75.1
Msa0283440 AT2G34930.1 33.766 231 136 10 47 263 204 431 2.74e-14 74.7
Msa0283440 AT1G27170.1 30.093 216 121 6 69 258 769 980 3.88e-14 74.3
Msa0283440 AT1G27170.2 30.093 216 121 6 69 258 769 980 4.45e-14 74.3
Msa0283440 AT1G69550.1 39.631 217 120 11 53 262 920 1132 1.89e-13 72.4
Msa0283440 AT1G69550.1 39.175 194 109 9 75 262 871 1061 2.65e-13 72.0
Msa0283440 AT1G69550.1 38.739 222 124 11 47 260 985 1202 1.72e-12 69.3
Msa0283440 AT1G69550.1 31.600 250 138 9 44 262 742 989 7.40e-11 64.3
Msa0283440 AT1G69550.1 34.127 252 141 12 75 317 1039 1274 7.60e-11 64.3
Msa0283440 AT5G07910.1 27.586 232 137 6 46 274 25 228 2.27e-13 69.7
Msa0283440 AT2G33170.2 32.710 214 135 9 66 272 86 297 2.48e-13 72.0
Msa0283440 AT2G33170.1 32.710 214 135 9 66 272 86 297 2.48e-13 72.0
Msa0283440 AT2G15080.1 33.632 223 132 12 53 267 104 318 2.62e-13 71.6
Msa0283440 AT2G15080.2 33.632 223 132 12 53 267 104 318 2.62e-13 71.6
Msa0283440 AT3G56370.1 33.721 258 134 11 42 265 69 323 2.65e-13 71.6
Msa0283440 AT3G56370.1 32.365 241 146 9 32 263 226 458 9.00e-13 70.1
Msa0283440 AT5G44700.1 33.333 231 142 11 44 265 266 493 6.97e-13 70.5
Msa0283440 AT3G11080.2 34.783 184 92 7 87 266 123 282 2.14e-12 68.9
Msa0283440 AT3G11080.1 34.783 184 92 7 87 266 123 282 2.14e-12 68.9
Msa0283440 AT1G27180.1 29.577 213 144 6 49 258 945 1154 2.31e-12 68.9
Msa0283440 AT1G27180.3 29.577 213 144 6 49 258 783 992 2.41e-12 68.9
Msa0283440 AT1G27180.3 30.631 222 144 7 49 265 830 1046 3.06e-11 65.5
Msa0283440 AT1G27180.2 29.577 213 144 6 49 258 783 992 2.50e-12 68.9
Msa0283440 AT4G04220.1 32.540 252 146 12 28 263 67 310 2.63e-12 68.6
Msa0283440 AT1G27180.5 29.577 213 144 6 49 258 781 990 3.22e-12 68.6
Msa0283440 AT1G27180.8 29.577 213 144 6 49 258 781 990 3.22e-12 68.6
Msa0283440 AT5G07180.1 33.803 213 132 9 67 273 75 284 4.07e-12 68.2
Msa0283440 AT1G27180.7 29.577 213 144 6 49 258 607 816 4.20e-12 68.2
Msa0283440 AT1G27180.6 29.577 213 144 6 49 258 607 816 4.20e-12 68.2
Msa0283440 AT1G27180.4 29.577 213 144 6 49 258 607 816 4.20e-12 68.2
Msa0283440 AT5G46330.2 33.473 239 119 12 67 268 164 399 6.29e-12 67.4
Msa0283440 AT5G46330.1 33.473 239 119 12 67 268 164 399 6.29e-12 67.4
Msa0283440 AT4G13920.1 30.542 203 130 9 65 258 79 279 7.43e-12 67.4
Msa0283440 AT3G24240.1 35.484 217 130 10 56 265 289 502 8.33e-12 67.0
Msa0283440 AT3G11010.5 32.189 233 145 10 39 265 61 286 2.30e-11 65.9
Msa0283440 AT3G11010.3 32.189 233 145 10 39 265 124 349 2.43e-11 65.9
Msa0283440 AT3G47570.1 32.927 246 154 11 91 328 338 580 2.51e-11 65.5
Msa0283440 AT5G61480.1 31.556 225 143 10 51 267 114 335 5.08e-11 64.7
Msa0283440 AT5G11250.3 33.459 266 163 13 50 307 603 862 7.05e-11 64.3
Msa0283440 AT5G11250.1 33.459 266 163 13 50 307 603 862 7.05e-11 64.3
Msa0283440 AT1G75640.1 29.353 201 132 9 70 262 293 491 7.10e-11 64.3
Msa0283440 AT5G11250.2 34.328 268 158 16 50 307 685 944 7.76e-11 64.3
Msa0283440 AT4G20140.1 30.435 230 125 11 70 267 580 806 8.27e-11 63.9
Msa0283440 AT5G17680.2 26.587 252 145 6 45 260 762 1009 9.36e-11 63.9

Find 111 sgRNAs with CRISPR-Local

Find 202 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAAATTCTGACTCACATTT+AGG 0.163400 2_3:-20617066 None:intergenic
CACCATCCACCATCTCTTCT+TGG 0.191377 2_3:-20617326 None:intergenic
TTCCCTCCACGCTTAGCTTT+TGG 0.217550 2_3:-20617204 None:intergenic
TAAATGTGAGTCAGAATTTC+CGG 0.300900 2_3:+20617068 Msa0283440:CDS
CAGCAACCATTGAGAATTGC+AGG 0.306044 2_3:+20615109 Msa0283440:CDS
AGAGAGACAACCAATGGAAT+TGG 0.315520 2_3:-20615040 None:intergenic
GAAATTCTGACTCACATTTA+GGG 0.316541 2_3:-20617065 None:intergenic
CAATGGTTGCTGGGAGGGAT+TGG 0.332249 2_3:-20615098 None:intergenic
TCTTGCTTCACCAGGCTTCA+TGG 0.336493 2_3:+20617438 Msa0283440:CDS
CGACGCCGACGGAGGAAGAT+AGG 0.344483 2_3:+20614166 Msa0283440:CDS
CTTGCTTCACCAGGCTTCAT+GGG 0.358409 2_3:+20617439 Msa0283440:CDS
TCCACTGGAGGTGGTGGAGC+AGG 0.362764 2_3:+20617243 Msa0283440:CDS
CTGCAATTCTCAATGGTTGC+TGG 0.367867 2_3:-20615108 None:intergenic
CCCGCTCAGTTCGCCTCCAC+TGG 0.372267 2_3:+20617228 Msa0283440:CDS
CTCAAAGCTTTGAATGTCTC+TGG 0.381783 2_3:+20615066 Msa0283440:CDS
TCTTCTTGGTTGGGATATGA+TGG 0.383328 2_3:-20617312 None:intergenic
GCTAAATCAAGAGAAAGTTT+AGG 0.388906 2_3:-20614231 None:intergenic
CTCTCACATGATGACTCTTA+TGG 0.393115 2_3:+20616973 Msa0283440:CDS
ATCCACCATCTCTTCTTGGT+TGG 0.393964 2_3:-20617322 None:intergenic
ATTATTAAACTTGGAGATGT+TGG 0.403539 2_3:+20614987 Msa0283440:CDS
GGACTTGCATGGCATGTCCT+TGG 0.409480 2_3:+20614200 Msa0283440:CDS
ACTTATCATGTCTCCATTGA+AGG 0.410083 2_3:-20617359 None:intergenic
TGGTGAAGCAAGACCATTCA+TGG 0.416329 2_3:-20617428 None:intergenic
TTCGCCTCCACTGGAGGTGG+TGG 0.417968 2_3:+20617237 Msa0283440:CDS
TCCACCATCTCTTCTTGGTT+GGG 0.419645 2_3:-20617321 None:intergenic
AGCTCAAAGCCTATTGTGTC+TGG 0.427395 2_3:-20616890 None:intergenic
GAGTCAGAATTTCCGGTACT+TGG 0.428594 2_3:+20617075 Msa0283440:CDS
ACGAGGTTCTCAAGGTCGTC+GGG 0.432286 2_3:-20617031 None:intergenic
TGGGAAACGATCAGAACATA+AGG 0.438511 2_3:+20617381 Msa0283440:CDS
GAGAGACAACCAATGGAATT+GGG 0.443595 2_3:-20615039 None:intergenic
CTTCACCAGGCTTCATGGGG+AGG 0.443666 2_3:+20617443 Msa0283440:CDS
TTCAATGGAGACATGATAAG+TGG 0.444496 2_3:+20617361 Msa0283440:CDS
AGCAAACTTCCAGACACAAT+AGG 0.451995 2_3:+20616881 Msa0283440:CDS
ATTCTCAATGGTTGCTGGGA+GGG 0.461311 2_3:-20615103 None:intergenic
AACGGCAAGATTATTAAACT+TGG 0.472327 2_3:+20614978 Msa0283440:CDS
CCACTGGAGGTGGTGGAGCA+GGG 0.480559 2_3:+20617244 Msa0283440:CDS
TGGAGGCATCCGATGGAGTC+GGG 0.485570 2_3:-20617175 None:intergenic
GACAACCTCCCCATGAAGCC+TGG 0.490735 2_3:-20617448 None:intergenic
TGCAATTCTCAATGGTTGCT+GGG 0.491491 2_3:-20615107 None:intergenic
CCAGTGGAGGCGAACTGAGC+GGG 0.492506 2_3:-20617228 None:intergenic
CTGGAGGCATCCGATGGAGT+CGG 0.492595 2_3:-20617176 None:intergenic
GAACATACCGGAGTCATTAA+CGG 0.493750 2_3:+20614960 Msa0283440:intron
GTGAAATGTGGGACCTTCAA+TGG 0.499860 2_3:+20617346 Msa0283440:CDS
CAGTTCGCCTCCACTGGAGG+TGG 0.507058 2_3:+20617234 Msa0283440:CDS
AATAAACCTGCAATTCTCAA+TGG 0.511036 2_3:-20615115 None:intergenic
TCAACTTAAGGAATTACGAC+GGG 0.513441 2_3:-20617491 None:intergenic
CAAGATTGACGAGGTTCTCA+AGG 0.516518 2_3:-20617039 None:intergenic
TCATCAGATGACAATGAAGA+TGG 0.519446 2_3:+20614098 Msa0283440:CDS
CTTCATTATCAACCCATGAA+TGG 0.521629 2_3:+20617415 Msa0283440:CDS
AGATCCCTACCCAATTCCAT+TGG 0.522866 2_3:+20615030 Msa0283440:CDS
ATGAATGGTCTTGCTTCACC+AGG 0.524055 2_3:+20617430 Msa0283440:CDS
AGGAAGACAGACCAGCTTGT+TGG 0.524539 2_3:-20616942 None:intergenic
TGCAGTCAACTCCAACAAGC+TGG 0.525294 2_3:+20616931 Msa0283440:CDS
TGCTCCACCACCTCCAGTGG+AGG 0.525602 2_3:-20617241 None:intergenic
GAGCTTCTGGAGGCATCCGA+TGG 0.527574 2_3:-20617182 None:intergenic
CAACAGTAGTCCTATGGAGT+AGG 0.528656 2_3:-20617107 None:intergenic
CCCTGCTCCACCACCTCCAG+TGG 0.531840 2_3:-20617244 None:intergenic
GAGTCATTGCCCTACTCCAT+AGG 0.539286 2_3:+20617097 Msa0283440:CDS
ATGTACGTTTGAACTGCCTC+AGG 0.543105 2_3:+20617002 Msa0283440:CDS
GGAAGATAGGGTTCATGTTG+TGG 0.545097 2_3:+20614179 Msa0283440:CDS
CTCCAAAAGCTAAGCGTGGA+GGG 0.545563 2_3:+20617202 Msa0283440:CDS
TAGGGACAACAGTAGTCCTA+TGG 0.545811 2_3:-20617113 None:intergenic
AATTACGACGGGGTGAGAAG+AGG 0.549684 2_3:-20617480 None:intergenic
GACGAGGTTCTCAAGGTCGT+CGG 0.550775 2_3:-20617032 None:intergenic
TTGCTTCACCAGGCTTCATG+GGG 0.551908 2_3:+20617440 Msa0283440:CDS
GACGCCGACGGAGGAAGATA+GGG 0.554013 2_3:+20614167 Msa0283440:CDS
CTATCTTCCTCCGTCGGCGT+CGG 0.555118 2_3:-20614165 None:intergenic
AAGTTTAGGAAGTGAGTCCA+AGG 0.558762 2_3:-20614217 None:intergenic
GACAACCAATGGAATTGGGT+AGG 0.561937 2_3:-20615035 None:intergenic
GTTCATGTTGTGGACTTGCA+TGG 0.567190 2_3:+20614189 Msa0283440:CDS
ATCATATGACAACAAGGAAG+AGG 0.567301 2_3:+20614121 Msa0283440:CDS
AGCTAACGTCTAGTTCAACT+AGG 0.568083 2_3:-20617132 None:intergenic
AAAACATTGCCCGACTCCAT+CGG 0.568332 2_3:+20617166 Msa0283440:CDS
GCTCAGTTCGCCTCCACTGG+AGG 0.570036 2_3:+20617231 Msa0283440:CDS
AGATGGTGGATGGTGAAATG+TGG 0.570372 2_3:+20617334 Msa0283440:CDS
AACAGTAGTCCTATGGAGTA+GGG 0.572641 2_3:-20617106 None:intergenic
ATCATGTGAGAGGTGGAGCT+AGG 0.579817 2_3:-20616962 None:intergenic
ACAACCAATGGAATTGGGTA+GGG 0.580388 2_3:-20615034 None:intergenic
GACGACGTCGCCGACGCCGA+CGG 0.580655 2_3:+20614155 Msa0283440:CDS
GGGAAACGATCAGAACATAA+GGG 0.581219 2_3:+20617382 Msa0283440:CDS
TTTGTCTAACAACAATCTCC+AGG 0.584234 2_3:+20614272 Msa0283440:CDS
AATCTTGCCGTTAATGACTC+CGG 0.589085 2_3:-20614967 None:intergenic
GAGTTTAGAGAGACAACCAA+TGG 0.592305 2_3:-20615046 None:intergenic
CGGGGTGAGAAGAGGCGAAG+AGG 0.596579 2_3:-20617472 None:intergenic
TCATATGACAACAAGGAAGA+GGG 0.600844 2_3:+20614122 Msa0283440:CDS
AGGGCAATGACTCCAAGTAC+CGG 0.604878 2_3:-20617087 None:intergenic
GCTCCAAAAGCTAAGCGTGG+AGG 0.605699 2_3:+20617201 Msa0283440:CDS
ATATCCCAACCAAGAAGAGA+TGG 0.606320 2_3:+20617317 Msa0283440:CDS
AACCAAGAAGAGATGGTGGA+TGG 0.610943 2_3:+20617324 Msa0283440:CDS
AATTGGGTAGGGATCTAAGC+TGG 0.619182 2_3:-20615023 None:intergenic
GGTCGTCGGGGAGACTCCTG+AGG 0.619878 2_3:-20617018 None:intergenic
TCAATGGAGACATGATAAGT+GGG 0.620791 2_3:+20617362 Msa0283440:CDS
AAGAGTCATCATGTGAGAGG+TGG 0.622685 2_3:-20616969 None:intergenic
GGGTAGGGATCTAAGCTGGT+TGG 0.623614 2_3:-20615019 None:intergenic
GACGTCGCCGACGCCGACGG+AGG 0.630661 2_3:+20614158 Msa0283440:CDS
TCCCAACCAAGAAGAGATGG+TGG 0.632111 2_3:+20617320 Msa0283440:CDS
GCTAACGTCTAGTTCAACTA+GGG 0.636021 2_3:-20617131 None:intergenic
CTCAACTTAAGGAATTACGA+CGG 0.637737 2_3:-20617492 None:intergenic
GGTGAAGCAAGACCATTCAT+GGG 0.642951 2_3:-20617427 None:intergenic
CATAAGAGTCATCATGTGAG+AGG 0.643496 2_3:-20616972 None:intergenic
GAAGCTCCAAAAGCTAAGCG+TGG 0.653198 2_3:+20617198 Msa0283440:CDS
GATGGTGGATGGTGAAATGT+GGG 0.654566 2_3:+20617335 Msa0283440:CDS
AATTCTCAATGGTTGCTGGG+AGG 0.654863 2_3:-20615104 None:intergenic
TCCAGTGGAGGCGAACTGAG+CGG 0.662649 2_3:-20617229 None:intergenic
AGATGGATCATATGACAACA+AGG 0.663062 2_3:+20614115 Msa0283440:CDS
GGTGGAGCAGGGATTGCATG+TGG 0.678013 2_3:+20617255 Msa0283440:CDS
CTATATATAACAGAACATAC+CGG 0.683092 2_3:+20614948 Msa0283440:intron
CGAGGTTCTCAAGGTCGTCG+GGG 0.683613 2_3:-20617030 None:intergenic
TGAACCCTATCTTCCTCCGT+CGG 0.693937 2_3:-20614171 None:intergenic
CAACTTAAGGAATTACGACG+GGG 0.695800 2_3:-20617490 None:intergenic
TTAGGGTTTCAAGATTGACG+AGG 0.703892 2_3:-20617048 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATTAGATGTAATATAA+CGG + chr2_3:20614688-20614707 Msa0283440:intron 10.0%
!! TGTTATATAAATTATTTGAT+AGG + chr2_3:20614911-20614930 Msa0283440:intron 10.0%
!!! TAGTTTTAAAAGTAATAATT+TGG + chr2_3:20615371-20615390 Msa0283440:intron 10.0%
!!! TATTCTTGTTTTTTTTTTTT+AGG + chr2_3:20616406-20616425 Msa0283440:intron 10.0%
!!! ATTCTTGTTTTTTTTTTTTA+GGG + chr2_3:20616407-20616426 Msa0283440:intron 10.0%
!! CAATTATTATATGATAAAAT+TGG + chr2_3:20616688-20616707 Msa0283440:intron 10.0%
!!! AAAGATTATTCTATTTGTTA+TGG - chr2_3:20614519-20614538 None:intergenic 15.0%
!! AATAGTTAATAAGGATAATT+TGG - chr2_3:20615348-20615367 None:intergenic 15.0%
!! AAATTATCCTTATTAACTAT+TGG + chr2_3:20615347-20615366 Msa0283440:intron 15.0%
!!! CATTTTGAAACAAATTTTTT+TGG + chr2_3:20615474-20615493 Msa0283440:intron 15.0%
!!! AATTTGTTAATATAAGTCTT+TGG - chr2_3:20616106-20616125 None:intergenic 15.0%
!! TATTAACAAATTACATTTGT+AGG + chr2_3:20616114-20616133 Msa0283440:intron 15.0%
!!! TTCTTGTTTTTTTTTTTTAG+GGG + chr2_3:20616408-20616427 Msa0283440:intron 15.0%
!! AAAAAATATATTTAATTGCC+TGG + chr2_3:20616511-20616530 Msa0283440:intron 15.0%
!!! AGTACAATGCAATTTTATTA+AGG + chr2_3:20614332-20614351 Msa0283440:intron 20.0%
!! AATAGAATAATCTTTGTTGA+AGG + chr2_3:20614524-20614543 Msa0283440:intron 20.0%
!! ATAGAATAATCTTTGTTGAA+GGG + chr2_3:20614525-20614544 Msa0283440:intron 20.0%
!! AAACTAACCAATAGTTAATA+AGG - chr2_3:20615357-20615376 None:intergenic 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG + chr2_3:20615434-20615453 Msa0283440:intron 20.0%
!!! ACATATTTTTAGTTGTGTAT+AGG + chr2_3:20615570-20615589 Msa0283440:intron 20.0%
!!! TTGCATAACTTTTTTTTTAG+TGG + chr2_3:20615681-20615700 Msa0283440:intron 20.0%
!! AAACAAGAATAAAAGTCTAT+CGG - chr2_3:20616397-20616416 None:intergenic 20.0%
!!! ATATTGATTTTGTGATGTTT+TGG - chr2_3:20616568-20616587 None:intergenic 20.0%
!! TTATTCAATCAATATCTAGT+TGG - chr2_3:20616625-20616644 None:intergenic 20.0%
!! AATTGTGCCAAAAAATTTAA+AGG + chr2_3:20616716-20616735 Msa0283440:intron 20.0%
!! ATTGTGCCAAAAAATTTAAA+GGG + chr2_3:20616717-20616736 Msa0283440:intron 20.0%
!!! ACATAACCCTTTAAATTTTT+TGG - chr2_3:20616726-20616745 None:intergenic 20.0%
! AATTGTGAATTTGTCAAACT+TGG - chr2_3:20614306-20614325 None:intergenic 25.0%
! TCCAAATCTTAAAATCATAG+TGG + chr2_3:20614484-20614503 Msa0283440:intron 25.0%
!!! ACCACTATGATTTTAAGATT+TGG - chr2_3:20614488-20614507 None:intergenic 25.0%
!!! GGATTTTTTTGATAAGTATC+TGG + chr2_3:20614573-20614592 Msa0283440:intron 25.0%
! CTATATATAACAGAACATAC+CGG + chr2_3:20614948-20614967 Msa0283440:intron 25.0%
! ATTATTAAACTTGGAGATGT+TGG + chr2_3:20614987-20615006 Msa0283440:CDS 25.0%
!!! AAACGACACTCATTTTAAAA+CGG - chr2_3:20615265-20615284 None:intergenic 25.0%
!!! TTTAAAATGAGTGTCGTTTT+AGG + chr2_3:20615266-20615285 Msa0283440:intron 25.0%
!!! TAACTTTTTTTTTAGTGGTC+TGG + chr2_3:20615686-20615705 Msa0283440:intron 25.0%
!!! AACTTTTTTTTTAGTGGTCT+GGG + chr2_3:20615687-20615706 Msa0283440:intron 25.0%
!!! ATGAATAGATAACTTGTTTG+AGG - chr2_3:20616036-20616055 None:intergenic 25.0%
! TTTATTTGCATGACATCATT+AGG - chr2_3:20616188-20616207 None:intergenic 25.0%
! ACAAATATTGAACCAGAATT+GGG - chr2_3:20616309-20616328 None:intergenic 25.0%
! AACAAATATTGAACCAGAAT+TGG - chr2_3:20616310-20616329 None:intergenic 25.0%
! AAAAACGAGAAATTCATGAT+GGG - chr2_3:20616476-20616495 None:intergenic 25.0%
! TAAAAACGAGAAATTCATGA+TGG - chr2_3:20616477-20616496 None:intergenic 25.0%
! TGATTAGAATTGAAATTTCC+AGG - chr2_3:20616532-20616551 None:intergenic 25.0%
! ATCAAAATTCATATGCATAC+GGG - chr2_3:20616817-20616836 None:intergenic 25.0%
! GATCAAAATTCATATGCATA+CGG - chr2_3:20616818-20616837 None:intergenic 25.0%
GCTAAATCAAGAGAAAGTTT+AGG - chr2_3:20614234-20614253 None:intergenic 30.0%
! TGGATCTAAATCCATGATTT+TGG - chr2_3:20614468-20614487 None:intergenic 30.0%
AATCTTTGTTGAAGGGAAAA+TGG + chr2_3:20614532-20614551 Msa0283440:intron 30.0%
AACGGCAAGATTATTAAACT+TGG + chr2_3:20614978-20614997 Msa0283440:CDS 30.0%
AATAAACCTGCAATTCTCAA+TGG - chr2_3:20615118-20615137 None:intergenic 30.0%
ACCCATATCAAGTTAATGTT+AGG + chr2_3:20615222-20615241 Msa0283440:intron 30.0%
! CCCTAACATTAACTTGATAT+GGG - chr2_3:20615226-20615245 None:intergenic 30.0%
CCCATATCAAGTTAATGTTA+GGG + chr2_3:20615223-20615242 Msa0283440:intron 30.0%
! TCCCTAACATTAACTTGATA+TGG - chr2_3:20615227-20615246 None:intergenic 30.0%
! TGTGCAGAGTATTAATTAGA+GGG + chr2_3:20615400-20615419 Msa0283440:intron 30.0%
!! AAGCAACACTCATTTTGAAA+CGG + chr2_3:20615500-20615519 Msa0283440:intron 30.0%
GCAAAACACAATAATGAACA+TGG - chr2_3:20615665-20615684 None:intergenic 30.0%
GACAATGCATAATATATGCA+AGG - chr2_3:20615726-20615745 None:intergenic 30.0%
!! ATATAAGTCTTTGGTTTGCA+TGG - chr2_3:20616097-20616116 None:intergenic 30.0%
GAACTAACCATGATTAAATC+AGG + chr2_3:20616370-20616389 Msa0283440:intron 30.0%
AAAACGAGAAATTCATGATG+GGG - chr2_3:20616475-20616494 None:intergenic 30.0%
!! TTTTGTGATGTTTTGGATCT+AGG - chr2_3:20616561-20616580 None:intergenic 30.0%
TCAATCAATATCTAGTTGGT+AGG - chr2_3:20616621-20616640 None:intergenic 30.0%
GAAATTCTGACTCACATTTA+GGG - chr2_3:20617068-20617087 None:intergenic 30.0%
TAAATGTGAGTCAGAATTTC+CGG + chr2_3:20617068-20617087 Msa0283440:CDS 30.0%
TCATCAGATGACAATGAAGA+TGG + chr2_3:20614098-20614117 Msa0283440:CDS 35.0%
AGATGGATCATATGACAACA+AGG + chr2_3:20614115-20614134 Msa0283440:CDS 35.0%
ATCATATGACAACAAGGAAG+AGG + chr2_3:20614121-20614140 Msa0283440:CDS 35.0%
TCATATGACAACAAGGAAGA+GGG + chr2_3:20614122-20614141 Msa0283440:CDS 35.0%
TTTGTCTAACAACAATCTCC+AGG + chr2_3:20614272-20614291 Msa0283440:CDS 35.0%
TCATGATGAGATCAATAGCT+AGG + chr2_3:20614423-20614442 Msa0283440:intron 35.0%
TGAGATCAATAGCTAGGAAT+AGG + chr2_3:20614429-20614448 Msa0283440:intron 35.0%
TGGCATAATCTTGTACTACT+TGG + chr2_3:20614552-20614571 Msa0283440:intron 35.0%
!!! GACACTCATTTTAAAACGGA+TGG - chr2_3:20615261-20615280 None:intergenic 35.0%
! GTGTGCAGAGTATTAATTAG+AGG + chr2_3:20615399-20615418 Msa0283440:intron 35.0%
!!! AACACTCATTTTGAAACGGA+TGG + chr2_3:20615504-20615523 Msa0283440:intron 35.0%
TGCATAATATATGCAAGGTC+CGG - chr2_3:20615721-20615740 None:intergenic 35.0%
! TAAGCATAACTCAGTTGGTA+TGG - chr2_3:20615748-20615767 None:intergenic 35.0%
TTGCATAACTATCTACCAAG+TGG + chr2_3:20615778-20615797 Msa0283440:intron 35.0%
TGCATAACTATCTACCAAGT+GGG + chr2_3:20615779-20615798 Msa0283440:intron 35.0%
!!! GTTTTTTTAAGTTCCCCACT+TGG - chr2_3:20615796-20615815 None:intergenic 35.0%
AATATTGAACCAGAATTGGG+AGG - chr2_3:20616306-20616325 None:intergenic 35.0%
TATCGGACCTGATTTAATCA+TGG - chr2_3:20616380-20616399 None:intergenic 35.0%
AAACGAGAAATTCATGATGG+GGG - chr2_3:20616474-20616493 None:intergenic 35.0%
!! ATTCAGTTCTTCTAAAGCTC+TGG - chr2_3:20616843-20616862 None:intergenic 35.0%
GGAAATTCTGACTCACATTT+AGG - chr2_3:20617069-20617088 None:intergenic 35.0%
ACTTATCATGTCTCCATTGA+AGG - chr2_3:20617362-20617381 None:intergenic 35.0%
TTCAATGGAGACATGATAAG+TGG + chr2_3:20617361-20617380 Msa0283440:CDS 35.0%
TCAATGGAGACATGATAAGT+GGG + chr2_3:20617362-20617381 Msa0283440:CDS 35.0%
CTTCATTATCAACCCATGAA+TGG + chr2_3:20617415-20617434 Msa0283440:CDS 35.0%
TCAACTTAAGGAATTACGAC+GGG - chr2_3:20617494-20617513 None:intergenic 35.0%
AAGTTTAGGAAGTGAGTCCA+AGG - chr2_3:20614220-20614239 None:intergenic 40.0%
TCAAACTTGGAGATTGTACC+TGG - chr2_3:20614293-20614312 None:intergenic 40.0%
GAACATACCGGAGTCATTAA+CGG + chr2_3:20614960-20614979 Msa0283440:intron 40.0%
AATCTTGCCGTTAATGACTC+CGG - chr2_3:20614970-20614989 None:intergenic 40.0%
ACAACCAATGGAATTGGGTA+GGG - chr2_3:20615037-20615056 None:intergenic 40.0%
GAGAGACAACCAATGGAATT+GGG - chr2_3:20615042-20615061 None:intergenic 40.0%
AGAGAGACAACCAATGGAAT+TGG - chr2_3:20615043-20615062 None:intergenic 40.0%
GAGTTTAGAGAGACAACCAA+TGG - chr2_3:20615049-20615068 None:intergenic 40.0%
!! CTCAAAGCTTTGAATGTCTC+TGG + chr2_3:20615066-20615085 Msa0283440:CDS 40.0%
TGCAATTCTCAATGGTTGCT+GGG - chr2_3:20615110-20615129 None:intergenic 40.0%
CATAATATATGCAAGGTCCG+GGG - chr2_3:20615719-20615738 None:intergenic 40.0%
GCATAATATATGCAAGGTCC+GGG - chr2_3:20615720-20615739 None:intergenic 40.0%
GCATAACTATCTACCAAGTG+GGG + chr2_3:20615780-20615799 Msa0283440:intron 40.0%
!! CTTTGGTTTGCATGGTACAT+GGG - chr2_3:20616089-20616108 None:intergenic 40.0%
!! TCTTTGGTTTGCATGGTACA+TGG - chr2_3:20616090-20616109 None:intergenic 40.0%
!! AATTGGGAGGTTTTGTCTGT+TGG - chr2_3:20616293-20616312 None:intergenic 40.0%
TATAAAGACGTGAAGCATGC+AGG - chr2_3:20616650-20616669 None:intergenic 40.0%
GCATGCTTCACGTCTTTATA+AGG + chr2_3:20616650-20616669 Msa0283440:intron 40.0%
AGCAAACTTCCAGACACAAT+AGG + chr2_3:20616881-20616900 Msa0283440:CDS 40.0%
CATAAGAGTCATCATGTGAG+AGG - chr2_3:20616975-20616994 None:intergenic 40.0%
CTCTCACATGATGACTCTTA+TGG + chr2_3:20616973-20616992 Msa0283440:CDS 40.0%
TTAGGGTTTCAAGATTGACG+AGG - chr2_3:20617051-20617070 None:intergenic 40.0%
AACAGTAGTCCTATGGAGTA+GGG - chr2_3:20617109-20617128 None:intergenic 40.0%
! GCTAACGTCTAGTTCAACTA+GGG - chr2_3:20617134-20617153 None:intergenic 40.0%
! AGCTAACGTCTAGTTCAACT+AGG - chr2_3:20617135-20617154 None:intergenic 40.0%
TCTTCTTGGTTGGGATATGA+TGG - chr2_3:20617315-20617334 None:intergenic 40.0%
ATATCCCAACCAAGAAGAGA+TGG + chr2_3:20617317-20617336 Msa0283440:CDS 40.0%
TGGGAAACGATCAGAACATA+AGG + chr2_3:20617381-20617400 Msa0283440:CDS 40.0%
GGGAAACGATCAGAACATAA+GGG + chr2_3:20617382-20617401 Msa0283440:CDS 40.0%
CAACTTAAGGAATTACGACG+GGG - chr2_3:20617493-20617512 None:intergenic 40.0%
GGAAGATAGGGTTCATGTTG+TGG + chr2_3:20614179-20614198 Msa0283440:CDS 45.0%
GTTCATGTTGTGGACTTGCA+TGG + chr2_3:20614189-20614208 Msa0283440:CDS 45.0%
GCACTAGAGAGCCAAAATCA+TGG + chr2_3:20614454-20614473 Msa0283440:intron 45.0%
AATTGGGTAGGGATCTAAGC+TGG - chr2_3:20615026-20615045 None:intergenic 45.0%
AGATCCCTACCCAATTCCAT+TGG + chr2_3:20615030-20615049 Msa0283440:CDS 45.0%
GACAACCAATGGAATTGGGT+AGG - chr2_3:20615038-20615057 None:intergenic 45.0%
ATTCTCAATGGTTGCTGGGA+GGG - chr2_3:20615106-20615125 None:intergenic 45.0%
AATTCTCAATGGTTGCTGGG+AGG - chr2_3:20615107-20615126 None:intergenic 45.0%
CTGCAATTCTCAATGGTTGC+TGG - chr2_3:20615111-20615130 None:intergenic 45.0%
CAGCAACCATTGAGAATTGC+AGG + chr2_3:20615109-20615128 Msa0283440:CDS 45.0%
CCTCGTAAGCATAACTCAGT+TGG - chr2_3:20615753-20615772 None:intergenic 45.0%
CCAACTGAGTTATGCTTACG+AGG + chr2_3:20615750-20615769 Msa0283440:intron 45.0%
CAGACAAAACCTCCCAATTC+TGG + chr2_3:20616294-20616313 Msa0283440:intron 45.0%
!! CAGTTCTTCTAAAGCTCTGG+TGG - chr2_3:20616840-20616859 None:intergenic 45.0%
AGCTCAAAGCCTATTGTGTC+TGG - chr2_3:20616893-20616912 None:intergenic 45.0%
AAGAGTCATCATGTGAGAGG+TGG - chr2_3:20616972-20616991 None:intergenic 45.0%
ATGTACGTTTGAACTGCCTC+AGG + chr2_3:20617002-20617021 Msa0283440:CDS 45.0%
CAAGATTGACGAGGTTCTCA+AGG - chr2_3:20617042-20617061 None:intergenic 45.0%
GAGTCAGAATTTCCGGTACT+TGG + chr2_3:20617075-20617094 Msa0283440:CDS 45.0%
CAACAGTAGTCCTATGGAGT+AGG - chr2_3:20617110-20617129 None:intergenic 45.0%
TAGGGACAACAGTAGTCCTA+TGG - chr2_3:20617116-20617135 None:intergenic 45.0%
AAAACATTGCCCGACTCCAT+CGG + chr2_3:20617166-20617185 Msa0283440:CDS 45.0%
!!! TTAGCTTTTGGAGCTTCTGG+AGG - chr2_3:20617195-20617214 None:intergenic 45.0%
TCCACCATCTCTTCTTGGTT+GGG - chr2_3:20617324-20617343 None:intergenic 45.0%
ATCCACCATCTCTTCTTGGT+TGG - chr2_3:20617325-20617344 None:intergenic 45.0%
!! AACCAAGAAGAGATGGTGGA+TGG + chr2_3:20617324-20617343 Msa0283440:CDS 45.0%
!! AGATGGTGGATGGTGAAATG+TGG + chr2_3:20617334-20617353 Msa0283440:CDS 45.0%
!! GATGGTGGATGGTGAAATGT+GGG + chr2_3:20617335-20617354 Msa0283440:CDS 45.0%
GTGAAATGTGGGACCTTCAA+TGG + chr2_3:20617346-20617365 Msa0283440:CDS 45.0%
GGTGAAGCAAGACCATTCAT+GGG - chr2_3:20617430-20617449 None:intergenic 45.0%
TGGTGAAGCAAGACCATTCA+TGG - chr2_3:20617431-20617450 None:intergenic 45.0%
! ATGAATGGTCTTGCTTCACC+AGG + chr2_3:20617430-20617449 Msa0283440:CDS 45.0%
!!! TTTATTAATATTTTAAAAAC+TGG + chr2_3:20616258-20616277 Msa0283440:intron 5.0%
TGAACCCTATCTTCCTCCGT+CGG - chr2_3:20614174-20614193 None:intergenic 50.0%
TGCAGTCAACTCCAACAAGC+TGG + chr2_3:20616931-20616950 Msa0283440:CDS 50.0%
AGGAAGACAGACCAGCTTGT+TGG - chr2_3:20616945-20616964 None:intergenic 50.0%
ATCATGTGAGAGGTGGAGCT+AGG - chr2_3:20616965-20616984 None:intergenic 50.0%
AGGGCAATGACTCCAAGTAC+CGG - chr2_3:20617090-20617109 None:intergenic 50.0%
GAGTCATTGCCCTACTCCAT+AGG + chr2_3:20617097-20617116 Msa0283440:CDS 50.0%
!!! CGCTTAGCTTTTGGAGCTTC+TGG - chr2_3:20617198-20617217 None:intergenic 50.0%
GAAGCTCCAAAAGCTAAGCG+TGG + chr2_3:20617198-20617217 Msa0283440:CDS 50.0%
CTCCAAAAGCTAAGCGTGGA+GGG + chr2_3:20617202-20617221 Msa0283440:CDS 50.0%
!! TTCCCTCCACGCTTAGCTTT+TGG - chr2_3:20617207-20617226 None:intergenic 50.0%
TCCCAACCAAGAAGAGATGG+TGG + chr2_3:20617320-20617339 Msa0283440:CDS 50.0%
CACCATCCACCATCTCTTCT+TGG - chr2_3:20617329-20617348 None:intergenic 50.0%
TCTTGCTTCACCAGGCTTCA+TGG + chr2_3:20617438-20617457 Msa0283440:CDS 50.0%
CTTGCTTCACCAGGCTTCAT+GGG + chr2_3:20617439-20617458 Msa0283440:CDS 50.0%
TTGCTTCACCAGGCTTCATG+GGG + chr2_3:20617440-20617459 Msa0283440:CDS 50.0%
AATTACGACGGGGTGAGAAG+AGG - chr2_3:20617483-20617502 None:intergenic 50.0%
GGACTTGCATGGCATGTCCT+TGG + chr2_3:20614200-20614219 Msa0283440:CDS 55.0%
GGGTAGGGATCTAAGCTGGT+TGG - chr2_3:20615022-20615041 None:intergenic 55.0%
CAATGGTTGCTGGGAGGGAT+TGG - chr2_3:20615101-20615120 None:intergenic 55.0%
AGTGGTCTGGGTTTGAACCC+CGG + chr2_3:20615699-20615718 Msa0283440:intron 55.0%
ACGAGGTTCTCAAGGTCGTC+GGG - chr2_3:20617034-20617053 None:intergenic 55.0%
GACGAGGTTCTCAAGGTCGT+CGG - chr2_3:20617035-20617054 None:intergenic 55.0%
GCTCCAAAAGCTAAGCGTGG+AGG + chr2_3:20617201-20617220 Msa0283440:CDS 55.0%
CTATCTTCCTCCGTCGGCGT+CGG - chr2_3:20614168-20614187 None:intergenic 60.0%
GACGCCGACGGAGGAAGATA+GGG + chr2_3:20614167-20614186 Msa0283440:CDS 60.0%
CGAGGTTCTCAAGGTCGTCG+GGG - chr2_3:20617033-20617052 None:intergenic 60.0%
!! TGGAGGCATCCGATGGAGTC+GGG - chr2_3:20617178-20617197 None:intergenic 60.0%
!! CTGGAGGCATCCGATGGAGT+CGG - chr2_3:20617179-20617198 None:intergenic 60.0%
!! GAGCTTCTGGAGGCATCCGA+TGG - chr2_3:20617185-20617204 None:intergenic 60.0%
TCCAGTGGAGGCGAACTGAG+CGG - chr2_3:20617232-20617251 None:intergenic 60.0%
GGTGGAGCAGGGATTGCATG+TGG + chr2_3:20617255-20617274 Msa0283440:CDS 60.0%
CTTCACCAGGCTTCATGGGG+AGG + chr2_3:20617443-20617462 Msa0283440:CDS 60.0%
GACAACCTCCCCATGAAGCC+TGG - chr2_3:20617451-20617470 None:intergenic 60.0%
CGACGCCGACGGAGGAAGAT+AGG + chr2_3:20614166-20614185 Msa0283440:CDS 65.0%
CCAGTGGAGGCGAACTGAGC+GGG - chr2_3:20617231-20617250 None:intergenic 65.0%
GCTCAGTTCGCCTCCACTGG+AGG + chr2_3:20617231-20617250 Msa0283440:CDS 65.0%
CAGTTCGCCTCCACTGGAGG+TGG + chr2_3:20617234-20617253 Msa0283440:CDS 65.0%
TTCGCCTCCACTGGAGGTGG+TGG + chr2_3:20617237-20617256 Msa0283440:CDS 65.0%
TGCTCCACCACCTCCAGTGG+AGG - chr2_3:20617244-20617263 None:intergenic 65.0%
!! TCCACTGGAGGTGGTGGAGC+AGG + chr2_3:20617243-20617262 Msa0283440:CDS 65.0%
!! CCACTGGAGGTGGTGGAGCA+GGG + chr2_3:20617244-20617263 Msa0283440:CDS 65.0%
CGGGGTGAGAAGAGGCGAAG+AGG - chr2_3:20617475-20617494 None:intergenic 65.0%
GGTCGTCGGGGAGACTCCTG+AGG - chr2_3:20617021-20617040 None:intergenic 70.0%
CCCGCTCAGTTCGCCTCCAC+TGG + chr2_3:20617228-20617247 Msa0283440:CDS 70.0%
CCCTGCTCCACCACCTCCAG+TGG - chr2_3:20617247-20617266 None:intergenic 70.0%
GACGACGTCGCCGACGCCGA+CGG + chr2_3:20614155-20614174 Msa0283440:CDS 75.0%
! GACGTCGCCGACGCCGACGG+AGG + chr2_3:20614158-20614177 Msa0283440:CDS 80.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 20614060 20617513 20614060 ID=Msa0283440;Name=Msa0283440
chr2_3 mRNA 20614060 20617513 20614060 ID=Msa0283440-mRNA-1;Parent=Msa0283440;Name=Msa0283440-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0|0|1|1|1|3|0|357
chr2_3 exon 20614060 20614293 20614060 ID=Msa0283440-mRNA-1:exon:8134;Parent=Msa0283440-mRNA-1
chr2_3 exon 20614961 20615130 20614961 ID=Msa0283440-mRNA-1:exon:8135;Parent=Msa0283440-mRNA-1
chr2_3 exon 20616844 20617513 20616844 ID=Msa0283440-mRNA-1:exon:8136;Parent=Msa0283440-mRNA-1
chr2_3 CDS 20614060 20614293 20614060 ID=Msa0283440-mRNA-1:cds;Parent=Msa0283440-mRNA-1
chr2_3 CDS 20614961 20615130 20614961 ID=Msa0283440-mRNA-1:cds;Parent=Msa0283440-mRNA-1
chr2_3 CDS 20616844 20617513 20616844 ID=Msa0283440-mRNA-1:cds;Parent=Msa0283440-mRNA-1
Gene Sequence

>Msa0283440

ATGTATGAATTGCAACAATTTCAGTTTCTTCATCAAGATCATCAGATGACAATGAAGATGGATCATATGACAACAAGGAAGAGGGAGACAAAAAAGACGACGTCGCCGACGCCGACGGAGGAAGATAGGGTTCATGTTGTGGACTTGCATGGCATGTCCTTGGACTCACTTCCTAAACTTTCTCTTGATTTAGCTATTATTTGCAAGCTCAATTTGTCTAACAACAATCTCCAGAACATACCGGAGTCATTAACGGCAAGATTATTAAACTTGGAGATGTTGGACGTGCACTCCAACCAGCTTAGATCCCTACCCAATTCCATTGGTTGTCTCTCTAAACTCAAAGCTTTGAATGTCTCTGGAAACTTCATCCAATCCCTCCCAGCAACCATTGAGAATTGCAGAGCTTTAGAAGAACTGAATCTCAACTTCAACATGTTGAGCAAACTTCCAGACACAATAGGCTTTGAGCTCATAAAACTCAAGAAGCTTGCAGTCAACTCCAACAAGCTGGTCTGTCTTCCTAGCTCCACCTCTCACATGATGACTCTTATGGTTCTCGATGTACGTTTGAACTGCCTCAGGAGTCTCCCCGACGACCTTGAGAACCTCGTCAATCTTGAAACCCTAAATGTGAGTCAGAATTTCCGGTACTTGGAGTCATTGCCCTACTCCATAGGACTACTGTTGTCCCTAGTTGAACTAGACGTTAGCTACAACAATATCAAAACATTGCCCGACTCCATCGGATGCCTCCAGAAGCTCCAAAAGCTAAGCGTGGAGGGAAACCCGCTCAGTTCGCCTCCACTGGAGGTGGTGGAGCAGGGATTGCATGTGGTGAAAGAGTACATGTGTAACAAAATGAACTCAAGCCATCATATCCCAACCAAGAAGAGATGGTGGATGGTGAAATGTGGGACCTTCAATGGAGACATGATAAGTGGGAAACGATCAGAACATAAGGGTTTCAACAAGCTTCATTATCAACCCATGAATGGTCTTGCTTCACCAGGCTTCATGGGGAGGTTGTCGCCTCTTCGCCTCTTCTCACCCCGTCGTAATTCCTTAAGTTGA
Protein sequence

>Msa0283440

MYELQQFQFLHQDHQMTMKMDHMTTRKRETKKTTSPTPTEEDRVHVVDLHGMSLDSLPKLSLDLAIICKLNLSNNNLQNIPESLTARLLNLEMLDVHSNQLRSLPNSIGCLSKLKALNVSGNFIQSLPATIENCRALEELNLNFNMLSKLPDTIGFELIKLKKLAVNSNKLVCLPSSTSHMMTLMVLDVRLNCLRSLPDDLENLVNLETLNVSQNFRYLESLPYSIGLLLSLVELDVSYNNIKTLPDSIGCLQKLQKLSVEGNPLSSPPLEVVEQGLHVVKEYMCNKMNSSHHIPTKKRWWMVKCGTFNGDMISGKRSEHKGFNKLHYQPMNGLASPGFMGRLSPLRLFSPRRNSLS*