Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0671490 | XP_003605125.2 | 96.552 | 232 | 8 | 0 | 1 | 232 | 1 | 232 | 1.87e-163 | 461 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0671490 | G7JEM0 | 96.552 | 232 | 8 | 0 | 1 | 232 | 1 | 232 | 8.92e-164 | 461 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010150 | Msa0671490 | 0.813564 | 2.401959e-51 | -8.615850e-47 |
| Msa0027860 | Msa0671490 | 0.800605 | 1.332290e-48 | -8.615850e-47 |
| Msa0032040 | Msa0671490 | -0.801634 | 8.210215e-49 | -8.615850e-47 |
| Msa0034620 | Msa0671490 | 0.831017 | 2.118400e-55 | -8.615850e-47 |
| Msa0034770 | Msa0671490 | 0.838995 | 2.064083e-57 | -8.615850e-47 |
| Msa0046390 | Msa0671490 | 0.807823 | 4.187078e-50 | -8.615850e-47 |
| Msa0046670 | Msa0671490 | -0.803912 | 2.779674e-49 | -8.615850e-47 |
| Msa0059880 | Msa0671490 | 0.851048 | 1.143692e-60 | -8.615850e-47 |
| Msa0072940 | Msa0671490 | 0.803838 | 2.879766e-49 | -8.615850e-47 |
| Msa0090760 | Msa0671490 | -0.812533 | 4.041507e-51 | -8.615850e-47 |
| Msa0107460 | Msa0671490 | -0.800123 | 1.670279e-48 | -8.615850e-47 |
| Msa0112620 | Msa0671490 | 0.814572 | 1.439256e-51 | -8.615850e-47 |
| Msa0603800 | Msa0671490 | 0.806585 | 7.660645e-50 | -8.615850e-47 |
| Msa0622400 | Msa0671490 | -0.805967 | 1.033698e-49 | -8.615850e-47 |
| Msa0630130 | Msa0671490 | 0.817130 | 3.867151e-52 | -8.615850e-47 |
| Msa0631700 | Msa0671490 | 0.823476 | 1.357035e-53 | -8.615850e-47 |
| Msa0633070 | Msa0671490 | 0.811487 | 6.830783e-51 | -8.615850e-47 |
| Msa0634290 | Msa0671490 | 0.829555 | 4.821106e-55 | -8.615850e-47 |
| Msa0639410 | Msa0671490 | 0.811134 | 8.151087e-51 | -8.615850e-47 |
| Msa0643800 | Msa0671490 | -0.802064 | 6.696990e-49 | -8.615850e-47 |
| Msa0645150 | Msa0671490 | 0.818174 | 2.249037e-52 | -8.615850e-47 |
| Msa0646210 | Msa0671490 | 0.807981 | 3.876399e-50 | -8.615850e-47 |
| Msa0665910 | Msa0671490 | 0.801260 | 9.790618e-49 | -8.615850e-47 |
| Msa0668210 | Msa0671490 | 0.810723 | 1.000197e-50 | -8.615850e-47 |
| Msa0668220 | Msa0671490 | 0.826820 | 2.199664e-54 | -8.615850e-47 |
| Msa0670360 | Msa0671490 | 0.840319 | 9.339664e-58 | -8.615850e-47 |
| Msa0671490 | Msa0671640 | 0.801722 | 7.875078e-49 | -8.615850e-47 |
| Msa0671490 | Msa0678620 | 0.804525 | 2.071302e-49 | -8.615850e-47 |
| Msa0671490 | Msa0682420 | 0.805197 | 1.499166e-49 | -8.615850e-47 |
| Msa0671490 | Msa0684620 | 0.827459 | 1.546472e-54 | -8.615850e-47 |
| Msa0671490 | Msa0711230 | 0.820969 | 5.179293e-53 | -8.615850e-47 |
| Msa0671490 | Msa0711240 | 0.842855 | 2.003386e-58 | -8.615850e-47 |
| Msa0671490 | Msa0712500 | -0.808090 | 3.674628e-50 | -8.615850e-47 |
| Msa0671490 | Msa0715260 | 0.820152 | 7.977905e-53 | -8.615850e-47 |
| Msa0671490 | Msa0727480 | 0.809279 | 2.046560e-50 | -8.615850e-47 |
| Msa0671490 | Msa0735130 | 0.822810 | 1.940446e-53 | -8.615850e-47 |
| Msa0671490 | Msa0749900 | -0.802797 | 4.731053e-49 | -8.615850e-47 |
| Msa0671490 | Msa0757240 | 0.817737 | 2.824209e-52 | -8.615850e-47 |
| Msa0671490 | Msa0776290 | -0.802078 | 6.652519e-49 | -8.615850e-47 |
| Msa0671490 | Msa0787860 | 0.823914 | 1.071808e-53 | -8.615850e-47 |
| Msa0671490 | Msa0792330 | 0.842008 | 3.360412e-58 | -8.615850e-47 |
| Msa0671490 | Msa0798230 | 0.822459 | 2.342913e-53 | -8.615850e-47 |
| Msa0671490 | Msa0801860 | 0.803470 | 3.433721e-49 | -8.615850e-47 |
| Msa0671490 | Msa0814160 | 0.805071 | 1.593392e-49 | -8.615850e-47 |
| Msa0671490 | Msa0816140 | 0.820263 | 7.523112e-53 | -8.615850e-47 |
| Msa0671490 | Msa0824850 | 0.824084 | 9.777838e-54 | -8.615850e-47 |
| Msa0671490 | Msa0824860 | 0.816966 | 4.211208e-52 | -8.615850e-47 |
| Msa0671490 | Msa0830450 | -0.800049 | 1.729478e-48 | -8.615850e-47 |
| Msa0671490 | Msa0836740 | 0.818489 | 1.908231e-52 | -8.615850e-47 |
| Msa0671490 | Msa0854840 | 0.807006 | 6.241703e-50 | -8.615850e-47 |
| Msa0671490 | Msa0863840 | 0.812435 | 4.246044e-51 | -8.615850e-47 |
| Msa0671490 | Msa0863850 | 0.807335 | 5.315522e-50 | -8.615850e-47 |
| Msa0671490 | Msa0863860 | 0.813534 | 2.438172e-51 | -8.615850e-47 |
| Msa0671490 | Msa0864160 | 0.827219 | 1.765447e-54 | -8.615850e-47 |
| Msa0671490 | Msa0868820 | 0.817014 | 4.107276e-52 | -8.615850e-47 |
| Msa0671490 | Msa0868870 | 0.834457 | 2.963633e-56 | -8.615850e-47 |
| Msa0671490 | Msa0883640 | 0.804450 | 2.147315e-49 | -8.615850e-47 |
| Msa0671490 | Msa0896920 | 0.829606 | 4.686383e-55 | -8.615850e-47 |
| Msa0671490 | Msa0902340 | 0.835658 | 1.475985e-56 | -8.615850e-47 |
| Msa0671490 | Msa0910830 | 0.818353 | 2.049259e-52 | -8.615850e-47 |
| Msa0671490 | Msa0932890 | 0.819566 | 1.086160e-52 | -8.615850e-47 |
| Msa0671490 | Msa0932900 | 0.834037 | 3.777491e-56 | -8.615850e-47 |
| Msa0671490 | Msa0932910 | 0.833490 | 5.175173e-56 | -8.615850e-47 |
| Msa0671490 | Msa0932930 | 0.841754 | 3.922183e-58 | -8.615850e-47 |
| Msa0671490 | Msa0933580 | 0.838497 | 2.775888e-57 | -8.615850e-47 |
| Msa0671490 | Msa0933590 | 0.839643 | 1.401578e-57 | -8.615850e-47 |
| Msa0671490 | Msa0933610 | 0.837205 | 5.962342e-57 | -8.615850e-47 |
| Msa0671490 | Msa0941120 | 0.808780 | 2.618268e-50 | -8.615850e-47 |
| Msa0671490 | Msa0960090 | 0.803250 | 3.812385e-49 | -8.615850e-47 |
| Msa0671490 | Msa0970790 | 0.813432 | 2.566935e-51 | -8.615850e-47 |
| Msa0671490 | Msa0970820 | 0.804385 | 2.216219e-49 | -8.615850e-47 |
| Msa0671490 | Msa0985700 | 0.808043 | 3.759782e-50 | -8.615850e-47 |
| Msa0671490 | Msa1006170 | 0.837148 | 6.167319e-57 | -8.615850e-47 |
| Msa0671490 | Msa1011060 | -0.805709 | 1.171311e-49 | -8.615850e-47 |
| Msa0671490 | Msa1022510 | 0.806292 | 8.830687e-50 | -8.615850e-47 |
| Msa0671490 | Msa1024350 | 0.821556 | 3.792255e-53 | -8.615850e-47 |
| Msa0671490 | Msa1026050 | 0.867176 | 1.659397e-65 | -8.615850e-47 |
| Msa0671490 | Msa1037530 | 0.817934 | 2.548443e-52 | -8.615850e-47 |
| Msa0671490 | Msa1046220 | 0.809930 | 1.483235e-50 | -8.615850e-47 |
| Msa0671490 | Msa1048350 | 0.817763 | 2.785436e-52 | -8.615850e-47 |
| Msa0671490 | Msa1061670 | 0.827213 | 1.771108e-54 | -8.615850e-47 |
| Msa0671490 | Msa1064940 | 0.827315 | 1.674355e-54 | -8.615850e-47 |
| Msa0671490 | Msa1081610 | 0.818279 | 2.130071e-52 | -8.615850e-47 |
| Msa0671490 | Msa1087370 | 0.817307 | 3.528496e-52 | -8.615850e-47 |
| Msa0671490 | Msa1087380 | 0.852311 | 5.018194e-61 | -8.615850e-47 |
| Msa0671490 | Msa1098100 | 0.833643 | 4.739081e-56 | -8.615850e-47 |
| Msa0671490 | Msa1104960 | 0.819055 | 1.419476e-52 | -8.615850e-47 |
| Msa0671490 | Msa1106830 | -0.800450 | 1.432938e-48 | -8.615850e-47 |
| Msa0671490 | Msa1106960 | 0.825460 | 4.630402e-54 | -8.615850e-47 |
| Msa0671490 | Msa1109880 | 0.833003 | 6.844123e-56 | -8.615850e-47 |
| Msa0671490 | Msa1109890 | 0.843622 | 1.251285e-58 | -8.615850e-47 |
| Msa0671490 | Msa1110040 | 0.806592 | 7.631107e-50 | -8.615850e-47 |
| Msa0671490 | Msa1130410 | 0.805236 | 1.471517e-49 | -8.615850e-47 |
| Msa0671490 | Msa1138110 | 0.839709 | 1.347106e-57 | -8.615850e-47 |
| Msa0671490 | Msa1150250 | -0.801505 | 8.722701e-49 | -8.615850e-47 |
| Msa0671490 | Msa1170340 | 0.800506 | 1.396125e-48 | -8.615850e-47 |
| Msa0671490 | Msa1173290 | 0.817840 | 2.675884e-52 | -8.615850e-47 |
| Msa0671490 | Msa1181680 | 0.833194 | 6.136164e-56 | -8.615850e-47 |
| Msa0671490 | Msa1205560 | -0.803197 | 3.910635e-49 | -8.615850e-47 |
| Msa0671490 | Msa1214960 | 0.824248 | 8.948078e-54 | -8.615850e-47 |
| Msa0671490 | Msa1218720 | -0.804015 | 2.646343e-49 | -8.615850e-47 |
| Msa0671490 | Msa1224150 | -0.805995 | 1.019690e-49 | -8.615850e-47 |
| Msa0671490 | Msa1263460 | -0.804277 | 2.333389e-49 | -8.615850e-47 |
| Msa0671490 | Msa1291140 | -0.802050 | 6.744022e-49 | -8.615850e-47 |
| Msa0671490 | Msa1302750 | -0.800334 | 1.513434e-48 | -8.615850e-47 |
| Msa0671490 | Msa1321450 | 0.805066 | 1.597374e-49 | -8.615850e-47 |
| Msa0671490 | Msa1323150 | 0.804524 | 2.073014e-49 | -8.615850e-47 |
| Msa0671490 | Msa1325980 | -0.801710 | 7.918706e-49 | -8.615850e-47 |
| Msa0671490 | Msa1341030 | 0.823459 | 1.369599e-53 | -8.615850e-47 |
| Msa0671490 | Msa1355330 | 0.872779 | 2.446366e-67 | -8.615850e-47 |
| Msa0671490 | Msa1355340 | 0.830627 | 2.640668e-55 | -8.615850e-47 |
| Msa0671490 | Msa1362520 | 0.804984 | 1.661710e-49 | -8.615850e-47 |
| Msa0671490 | Msa1373560 | 0.820793 | 5.683810e-53 | -8.615850e-47 |
| Msa0671490 | Msa1375630 | -0.802411 | 5.682004e-49 | -8.615850e-47 |
| Msa0671490 | Msa1376070 | 0.800479 | 1.413510e-48 | -8.615850e-47 |
| Msa0671490 | Msa1382180 | 0.802621 | 5.144191e-49 | -8.615850e-47 |
| Msa0671490 | Msa1387650 | -0.803532 | 3.333407e-49 | -8.615850e-47 |
| Msa0671490 | Msa1395150 | 0.857572 | 1.490096e-62 | -8.615850e-47 |
| Msa0671490 | Msa1411550 | 0.827580 | 1.446735e-54 | -8.615850e-47 |
| Msa0671490 | Msa1419040 | -0.802816 | 4.688733e-49 | -8.615850e-47 |
| Msa0671490 | Msa1421130 | 0.805250 | 1.461563e-49 | -8.615850e-47 |
| Msa0671490 | Msa1444070 | -0.801847 | 7.421818e-49 | -8.615850e-47 |
| Msa0671490 | Msa1446090 | 0.833156 | 6.271266e-56 | -8.615850e-47 |
| Msa0671490 | Msa1448150 | 0.820835 | 5.559823e-53 | -8.615850e-47 |
| Msa0671490 | Msa1456600 | 0.852612 | 4.117678e-61 | -8.615850e-47 |
| Msa0121910 | Msa0671490 | 0.813243 | 2.824427e-51 | -8.615850e-47 |
| Msa0126760 | Msa0671490 | -0.802181 | 6.337427e-49 | -8.615850e-47 |
| Msa0129850 | Msa0671490 | 0.874156 | 8.413726e-68 | -8.615850e-47 |
| Msa0139230 | Msa0671490 | 0.800913 | 1.153262e-48 | -8.615850e-47 |
| Msa0150910 | Msa0671490 | 0.853347 | 2.537766e-61 | -8.615850e-47 |
| Msa0155850 | Msa0671490 | 0.810726 | 9.985830e-51 | -8.615850e-47 |
| Msa0177550 | Msa0671490 | 0.846050 | 2.770724e-59 | -8.615850e-47 |
| Msa0190670 | Msa0671490 | 0.809942 | 1.474281e-50 | -8.615850e-47 |
| Msa0192020 | Msa0671490 | -0.801997 | 6.915254e-49 | -8.615850e-47 |
| Msa0194230 | Msa0671490 | 0.804857 | 1.766019e-49 | -8.615850e-47 |
| Msa0197020 | Msa0671490 | 0.812630 | 3.848640e-51 | -8.615850e-47 |
| Msa0202060 | Msa0671490 | 0.803246 | 3.819687e-49 | -8.615850e-47 |
| Msa0207640 | Msa0671490 | 0.835424 | 1.691724e-56 | -8.615850e-47 |
| Msa0212550 | Msa0671490 | 0.802765 | 4.803711e-49 | -8.615850e-47 |
| Msa0225910 | Msa0671490 | 0.805264 | 1.451932e-49 | -8.615850e-47 |
| Msa0234120 | Msa0671490 | 0.806061 | 9.878622e-50 | -8.615850e-47 |
| Msa0236610 | Msa0671490 | 0.816034 | 6.807017e-52 | -8.615850e-47 |
| Msa0374040 | Msa0671490 | 0.801434 | 9.020066e-49 | -8.615850e-47 |
| Msa0380420 | Msa0671490 | -0.802079 | 6.649496e-49 | -8.615850e-47 |
| Msa0387120 | Msa0671490 | -0.807109 | 5.934545e-50 | -8.615850e-47 |
| Msa0393900 | Msa0671490 | 0.814251 | 1.694514e-51 | -8.615850e-47 |
| Msa0396700 | Msa0671490 | 0.805238 | 1.470457e-49 | -8.615850e-47 |
| Msa0398690 | Msa0671490 | 0.806638 | 7.465564e-50 | -8.615850e-47 |
| Msa0409490 | Msa0671490 | 0.816146 | 6.428545e-52 | -8.615850e-47 |
| Msa0409530 | Msa0671490 | 0.803056 | 4.181451e-49 | -8.615850e-47 |
| Msa0414480 | Msa0671490 | 0.813169 | 2.932025e-51 | -8.615850e-47 |
| Msa0414990 | Msa0671490 | -0.811593 | 6.477916e-51 | -8.615850e-47 |
| Msa0418150 | Msa0671490 | 0.853553 | 2.214673e-61 | -8.615850e-47 |
| Msa0418160 | Msa0671490 | 0.854689 | 1.041376e-61 | -8.615850e-47 |
| Msa0424300 | Msa0671490 | 0.803019 | 4.255694e-49 | -8.615850e-47 |
| Msa0444250 | Msa0671490 | 0.805479 | 1.308656e-49 | -8.615850e-47 |
| Msa0464300 | Msa0671490 | 0.871183 | 8.295505e-67 | -8.615850e-47 |
| Msa0464310 | Msa0671490 | 0.832292 | 1.027133e-55 | -8.615850e-47 |
| Msa0244320 | Msa0671490 | -0.802483 | 5.490870e-49 | -8.615850e-47 |
| Msa0245000 | Msa0671490 | 0.800264 | 1.563767e-48 | -8.615850e-47 |
| Msa0259110 | Msa0671490 | 0.857549 | 1.513394e-62 | -8.615850e-47 |
| Msa0259300 | Msa0671490 | 0.836733 | 7.870277e-57 | -8.615850e-47 |
| Msa0266640 | Msa0671490 | 0.820968 | 5.182860e-53 | -8.615850e-47 |
| Msa0266650 | Msa0671490 | 0.809258 | 2.068493e-50 | -8.615850e-47 |
| Msa0274250 | Msa0671490 | 0.828125 | 1.069717e-54 | -8.615850e-47 |
| Msa0274260 | Msa0671490 | 0.840284 | 9.540456e-58 | -8.615850e-47 |
| Msa0276580 | Msa0671490 | 0.814974 | 1.171980e-51 | -8.615850e-47 |
| Msa0278460 | Msa0671490 | 0.802832 | 4.651623e-49 | -8.615850e-47 |
| Msa0278950 | Msa0671490 | 0.809667 | 1.689490e-50 | -8.615850e-47 |
| Msa0283440 | Msa0671490 | 0.803821 | 2.903764e-49 | -8.615850e-47 |
| Msa0287720 | Msa0671490 | 0.822486 | 2.308846e-53 | -8.615850e-47 |
| Msa0297650 | Msa0671490 | 0.802840 | 4.635033e-49 | -8.615850e-47 |
| Msa0308430 | Msa0671490 | -0.801388 | 9.219546e-49 | -8.615850e-47 |
| Msa0314440 | Msa0671490 | 0.800519 | 1.387208e-48 | -8.615850e-47 |
| Msa0315300 | Msa0671490 | 0.803049 | 4.196107e-49 | -8.615850e-47 |
| Msa0316600 | Msa0671490 | 0.827755 | 1.312765e-54 | -8.615850e-47 |
| Msa0321750 | Msa0671490 | 0.814262 | 1.685360e-51 | -8.615850e-47 |
| Msa0342130 | Msa0671490 | 0.848984 | 4.324778e-60 | -8.615850e-47 |
| Msa0342160 | Msa0671490 | 0.839728 | 1.331734e-57 | -8.615850e-47 |
| Msa0343720 | Msa0671490 | 0.838771 | 2.358695e-57 | -8.615850e-47 |
| Msa0346170 | Msa0671490 | 0.802622 | 5.141914e-49 | -8.615850e-47 |
| Msa0491770 | Msa0671490 | 0.805686 | 1.184439e-49 | -8.615850e-47 |
| Msa0491800 | Msa0671490 | 0.808042 | 3.761692e-50 | -8.615850e-47 |
| Msa0515130 | Msa0671490 | 0.814574 | 1.437324e-51 | -8.615850e-47 |
| Msa0515150 | Msa0671490 | 0.804614 | 1.985110e-49 | -8.615850e-47 |
| Msa0528870 | Msa0671490 | -0.807830 | 4.172375e-50 | -8.615850e-47 |
| Msa0529420 | Msa0671490 | 0.852702 | 3.880911e-61 | -8.615850e-47 |
| Msa0533510 | Msa0671490 | 0.818159 | 2.266843e-52 | -8.615850e-47 |
| Msa0533520 | Msa0671490 | 0.807220 | 5.623462e-50 | -8.615850e-47 |
| Msa0535570 | Msa0671490 | 0.834832 | 2.385874e-56 | -8.615850e-47 |
| Msa0538440 | Msa0671490 | 0.837748 | 4.328039e-57 | -8.615850e-47 |
| Msa0538450 | Msa0671490 | 0.837251 | 5.802224e-57 | -8.615850e-47 |
| Msa0538520 | Msa0671490 | 0.837988 | 3.756200e-57 | -8.615850e-47 |
| Msa0538530 | Msa0671490 | 0.840585 | 7.957005e-58 | -8.615850e-47 |
| Msa0548820 | Msa0671490 | 0.805915 | 1.060101e-49 | -8.615850e-47 |
| Msa0553230 | Msa0671490 | -0.800431 | 1.445729e-48 | -8.615850e-47 |
| Msa0579530 | Msa0671490 | 0.816213 | 6.209462e-52 | -8.615850e-47 |
| Msa0589720 | Msa0671490 | 0.838503 | 2.767258e-57 | -8.615850e-47 |
| Msa0589730 | Msa0671490 | 0.811398 | 7.140814e-51 | -8.615850e-47 |
| Msa0589740 | Msa0671490 | 0.838539 | 2.708309e-57 | -8.615850e-47 |
| Msa0589750 | Msa0671490 | 0.805084 | 1.583565e-49 | -8.615850e-47 |
| Msa0591040 | Msa0671490 | 0.824867 | 6.394160e-54 | -8.615850e-47 |
| Msa0591490 | Msa0671490 | 0.807836 | 4.159733e-50 | -8.615850e-47 |
| Msa0594320 | Msa0671490 | 0.831070 | 2.056410e-55 | -8.615850e-47 |
| Msa0594330 | Msa0671490 | 0.832896 | 7.276669e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0671490 | MtrunA17_Chr4g0011241 | 96.552 | 232 | 8 | 0 | 1 | 232 | 1 | 232 | 1.72e-167 | 461 |
| Msa0671490 | MtrunA17_Chr5g0398711 | 51.271 | 236 | 104 | 5 | 1 | 232 | 51 | 279 | 2.48e-75 | 229 |
| Msa0671490 | MtrunA17_Chr4g0056901 | 53.782 | 238 | 89 | 8 | 1 | 231 | 1 | 224 | 5.44e-73 | 221 |
| Msa0671490 | MtrunA17_Chr5g0398721 | 50.420 | 238 | 103 | 6 | 1 | 232 | 4 | 232 | 1.23e-70 | 215 |
| Msa0671490 | MtrunA17_Chr7g0275631 | 30.901 | 233 | 141 | 8 | 5 | 231 | 3 | 221 | 2.98e-23 | 93.6 |
| Msa0671490 | MtrunA17_Chr6g0476521 | 29.310 | 232 | 136 | 8 | 5 | 231 | 4 | 212 | 3.95e-22 | 90.5 |
| Msa0671490 | MtrunA17_Chr1g0188241 | 30.962 | 239 | 122 | 11 | 5 | 231 | 4 | 211 | 2.16e-21 | 88.6 |
| Msa0671490 | MtrunA17_Chr6g0476511 | 28.879 | 232 | 135 | 9 | 5 | 231 | 4 | 210 | 1.70e-20 | 86.3 |
| Msa0671490 | MtrunA17_Chr4g0011081 | 29.004 | 231 | 133 | 10 | 5 | 231 | 4 | 207 | 2.78e-19 | 82.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0671490 | AT2G45360.1 | 54.113 | 231 | 89 | 4 | 1 | 231 | 1 | 214 | 8.90e-77 | 231 |
| Msa0671490 | AT3G60780.1 | 51.724 | 232 | 96 | 4 | 1 | 231 | 1 | 217 | 5.93e-74 | 224 |
| Msa0671490 | AT1G62840.1 | 44.538 | 238 | 112 | 6 | 1 | 232 | 1 | 224 | 2.85e-55 | 176 |
| Msa0671490 | AT1G12320.1 | 44.444 | 234 | 102 | 7 | 1 | 230 | 1 | 210 | 1.67e-45 | 151 |
| Msa0671490 | AT5G62280.1 | 27.347 | 245 | 136 | 10 | 5 | 231 | 4 | 224 | 2.81e-12 | 64.7 |
Find 65 sgRNAs with CRISPR-Local
Find 204 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAATGTTTCTTGGTTTAAA+TGG | 0.134381 | 4_4:+14875634 | Msa0671490:CDS |
| TACTTGTTGTTGAGGTTTAA+AGG | 0.216342 | 4_4:-14874602 | None:intergenic |
| ATAACATTCTACGATGAATT+TGG | 0.250717 | 4_4:-14875304 | None:intergenic |
| GGCAAAGGTCAAATGTTTCT+TGG | 0.312542 | 4_4:+14875625 | Msa0671490:CDS |
| TATACATCATGAAGCTTGTT+TGG | 0.316497 | 4_4:+14874527 | None:intergenic |
| TGCAATCTTGACCCTTCATC+TGG | 0.322628 | 4_4:-14875408 | None:intergenic |
| AGGCCAACACTTGCGGCTAT+TGG | 0.324490 | 4_4:-14875339 | None:intergenic |
| TTTGCCTGTTGGAAAGGGTT+TGG | 0.337937 | 4_4:+14875701 | Msa0671490:CDS |
| TTGTGGTGGATTGTAGGCTT+AGG | 0.346252 | 4_4:+14875532 | Msa0671490:CDS |
| GAGTACTAGAGGGGCAGTTT+TGG | 0.356533 | 4_4:+14875587 | Msa0671490:CDS |
| TGTGAGAAATTCAAGGAATC+TGG | 0.377584 | 4_4:+14875240 | Msa0671490:CDS |
| TGTGGTGGATTGTAGGCTTA+GGG | 0.385593 | 4_4:+14875533 | Msa0671490:CDS |
| GGGATACACCCATCTCGGCT+AGG | 0.414592 | 4_4:-14875443 | None:intergenic |
| ATTACAGTGTGAGAAATTCA+AGG | 0.434592 | 4_4:+14875233 | Msa0671490:intron |
| ACGGTGATCAAAAGTCTTGA+TGG | 0.439976 | 4_4:+14875498 | Msa0671490:CDS |
| GCTTACATAGGAAGTAGAAT+TGG | 0.450329 | 4_4:+14875729 | Msa0671490:CDS |
| TTGAGGTTTAAAGGTGCTTA+CGG | 0.456382 | 4_4:-14874593 | None:intergenic |
| AGTTCTCGGTGAAGCGCAAA+CGG | 0.470434 | 4_4:+14875479 | Msa0671490:CDS |
| GATGAATTTGGTGTTCCATC+CGG | 0.471577 | 4_4:-14875292 | None:intergenic |
| GGATACACCCATCTCGGCTA+GGG | 0.478620 | 4_4:-14875442 | None:intergenic |
| CACAAAAGCCCTAGCCGAGA+TGG | 0.481827 | 4_4:+14875434 | Msa0671490:CDS |
| ATATCCAAACCCTTTCCAAC+AGG | 0.485251 | 4_4:-14875705 | None:intergenic |
| AGCTTCAAGTAGTGCTTCAA+AGG | 0.491703 | 4_4:+14875761 | Msa0671490:CDS |
| ATTGATCTTACTTGTTGTTG+AGG | 0.510185 | 4_4:-14874610 | None:intergenic |
| GATCAAAAGTCTTGATGGGT+TGG | 0.514141 | 4_4:+14875503 | Msa0671490:CDS |
| CCGAGAACTATCTCCGGTGG+GGG | 0.517771 | 4_4:-14875465 | None:intergenic |
| TATCTATGAGTTTGATCCAA+CGG | 0.524838 | 4_4:-14875794 | None:intergenic |
| GCAGTTGCTGCTCGCAACAC+CGG | 0.530079 | 4_4:+14875363 | Msa0671490:CDS |
| AGGCACACGTGTGGTTAGAT+CGG | 0.531174 | 4_4:+14875674 | Msa0671490:CDS |
| TGGAACATGGTTCTTGAAAG+AGG | 0.534421 | 4_4:+14875654 | Msa0671490:CDS |
| TGTTGCGAGCAGCAACTGCT+AGG | 0.534968 | 4_4:-14875359 | None:intergenic |
| CACCGAGAACTATCTCCGGT+GGG | 0.537897 | 4_4:-14875467 | None:intergenic |
| GGTTTGGATATTGCTTACAT+AGG | 0.545757 | 4_4:+14875717 | Msa0671490:CDS |
| ACAAAAGCCCTAGCCGAGAT+GGG | 0.552505 | 4_4:+14875435 | Msa0671490:CDS |
| GGTGTTCCATCCGGCTGCCA+TGG | 0.552686 | 4_4:-14875283 | None:intergenic |
| CGGTGATCAAAAGTCTTGAT+GGG | 0.555108 | 4_4:+14875499 | Msa0671490:CDS |
| CTTCTATCATCCATGGCAGC+CGG | 0.557426 | 4_4:+14875273 | Msa0671490:CDS |
| TACATAGGAAGTAGAATTGG+TGG | 0.559347 | 4_4:+14875732 | Msa0671490:CDS |
| GCAATCTTGACCCTTCATCT+GGG | 0.562428 | 4_4:-14875407 | None:intergenic |
| ATCGTAGAATGTTATTCCCA+CGG | 0.567348 | 4_4:+14875312 | Msa0671490:CDS |
| TATGCACACGTGTCTTGCAC+CGG | 0.569145 | 4_4:-14875382 | None:intergenic |
| GTGTGCATAGTCCCAGATGA+AGG | 0.570105 | 4_4:+14875396 | Msa0671490:CDS |
| CGAGAACTATCTCCGGTGGG+GGG | 0.571171 | 4_4:-14875464 | None:intergenic |
| TCACCGAGAACTATCTCCGG+TGG | 0.572168 | 4_4:-14875468 | None:intergenic |
| TAGGGTTCTTAAGGTTGCAA+AGG | 0.574007 | 4_4:+14875563 | Msa0671490:CDS |
| GGTCCAATAGCCGCAAGTGT+TGG | 0.576902 | 4_4:+14875336 | Msa0671490:CDS |
| AGCTGAGCTTCTATCATCCA+TGG | 0.578564 | 4_4:+14875266 | Msa0671490:CDS |
| TATCATCCATGGCAGCCGGA+TGG | 0.579782 | 4_4:+14875277 | Msa0671490:CDS |
| TGCGGCTATTGGACCGCCGT+GGG | 0.584383 | 4_4:-14875328 | None:intergenic |
| CAAAGGGTACTCCTAGCCGT+TGG | 0.589404 | 4_4:+14875778 | Msa0671490:CDS |
| GCTTCAAGTAGTGCTTCAAA+GGG | 0.589534 | 4_4:+14875762 | Msa0671490:CDS |
| ACCGAGAACTATCTCCGGTG+GGG | 0.589901 | 4_4:-14875466 | None:intergenic |
| TTCTTGGTTTAAATGGAACA+TGG | 0.590885 | 4_4:+14875641 | Msa0671490:CDS |
| GTTGCAAAGGTGAGTACTAG+AGG | 0.597632 | 4_4:+14875576 | Msa0671490:CDS |
| AACTGCTAGGCCAACACTTG+CGG | 0.598354 | 4_4:-14875346 | None:intergenic |
| TTGCAAAGGTGAGTACTAGA+GGG | 0.599847 | 4_4:+14875577 | Msa0671490:CDS |
| GAGAACTATCTCCGGTGGGG+GGG | 0.611049 | 4_4:-14875463 | None:intergenic |
| TTGCGGCTATTGGACCGCCG+TGG | 0.612852 | 4_4:-14875329 | None:intergenic |
| TGTGCATAGTCCCAGATGAA+GGG | 0.619561 | 4_4:+14875397 | Msa0671490:CDS |
| ATGAGTTTGATCCAACGGCT+AGG | 0.623677 | 4_4:-14875789 | None:intergenic |
| ATAGGAAGTAGAATTGGTGG+TGG | 0.639207 | 4_4:+14875735 | Msa0671490:CDS |
| GCTTCACCGAGAACTATCTC+CGG | 0.641092 | 4_4:-14875471 | None:intergenic |
| TGCAAAGGTGAGTACTAGAG+GGG | 0.660954 | 4_4:+14875578 | Msa0671490:CDS |
| TCTTGAAAGAGGCACACGTG+TGG | 0.689378 | 4_4:+14875665 | Msa0671490:CDS |
| GTAGAATGTTATTCCCACGG+CGG | 0.814857 | 4_4:+14875315 | Msa0671490:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATATGGTATTAATTATTT+TGG | + | chr4_4:14875202-14875221 | Msa0671490:intron | 10.0% |
| !!! | TAATATGGTATTAATTATTT+TGG | + | chr4_4:14875202-14875221 | Msa0671490:intron | 10.0% |
| !! | AGAAAAAAATATTACAAAGA+GGG | - | chr4_4:14874740-14874759 | None:intergenic | 15.0% |
| !! | AAGAAAAAAATATTACAAAG+AGG | - | chr4_4:14874741-14874760 | None:intergenic | 15.0% |
| !!! | AATTGATGATGTTTTTAATA+TGG | + | chr4_4:14875187-14875206 | Msa0671490:intron | 15.0% |
| !! | AGAAAAAAATATTACAAAGA+GGG | - | chr4_4:14874740-14874759 | None:intergenic | 15.0% |
| !! | AAGAAAAAAATATTACAAAG+AGG | - | chr4_4:14874741-14874760 | None:intergenic | 15.0% |
| !!! | AATTGATGATGTTTTTAATA+TGG | + | chr4_4:14875187-14875206 | Msa0671490:intron | 15.0% |
| !! | ACTAAAATGGAAAAAAGAAA+GGG | - | chr4_4:14874715-14874734 | None:intergenic | 20.0% |
| !! | AACTAAAATGGAAAAAAGAA+AGG | - | chr4_4:14874716-14874735 | None:intergenic | 20.0% |
| !! | GAAGAAAAATTATACAAAGA+GGG | - | chr4_4:14875018-14875037 | None:intergenic | 20.0% |
| !! | AGAAGAAAAATTATACAAAG+AGG | - | chr4_4:14875019-14875038 | None:intergenic | 20.0% |
| !! | AATTAAGACAAATAACAACA+AGG | - | chr4_4:14875156-14875175 | None:intergenic | 20.0% |
| !! | AAACTCATAGATAAAAAATC+AGG | + | chr4_4:14875804-14875823 | Msa0671490:CDS | 20.0% |
| !! | ACTAAAATGGAAAAAAGAAA+GGG | - | chr4_4:14874715-14874734 | None:intergenic | 20.0% |
| !! | AACTAAAATGGAAAAAAGAA+AGG | - | chr4_4:14874716-14874735 | None:intergenic | 20.0% |
| !! | GAAGAAAAATTATACAAAGA+GGG | - | chr4_4:14875018-14875037 | None:intergenic | 20.0% |
| !! | AGAAGAAAAATTATACAAAG+AGG | - | chr4_4:14875019-14875038 | None:intergenic | 20.0% |
| !! | AATTAAGACAAATAACAACA+AGG | - | chr4_4:14875156-14875175 | None:intergenic | 20.0% |
| !! | AAACTCATAGATAAAAAATC+AGG | + | chr4_4:14875804-14875823 | Msa0671490:CDS | 20.0% |
| ! | ATAACATTCTACGATGAATT+TGG | - | chr4_4:14875307-14875326 | None:intergenic | 25.0% |
| !! | TTTTGGCATGTAAAAATGTA+TGG | + | chr4_4:14875604-14875623 | Msa0671490:CDS | 25.0% |
| ! | CAAATGTTTCTTGGTTTAAA+TGG | + | chr4_4:14875634-14875653 | Msa0671490:CDS | 25.0% |
| ! | ATAACATTCTACGATGAATT+TGG | - | chr4_4:14875307-14875326 | None:intergenic | 25.0% |
| !! | TTTTGGCATGTAAAAATGTA+TGG | + | chr4_4:14875604-14875623 | Msa0671490:CDS | 25.0% |
| ! | CAAATGTTTCTTGGTTTAAA+TGG | + | chr4_4:14875634-14875653 | Msa0671490:CDS | 25.0% |
| ! | AGTGTCTATGTAAGCTTTTA+AGG | - | chr4_4:14874566-14874585 | None:intergenic | 30.0% |
| !! | TACTTGTTGTTGAGGTTTAA+AGG | - | chr4_4:14874605-14874624 | None:intergenic | 30.0% |
| !! | ATTGATCTTACTTGTTGTTG+AGG | - | chr4_4:14874613-14874632 | None:intergenic | 30.0% |
| TACAAAGAGGGAAACTAAAA+TGG | - | chr4_4:14874728-14874747 | None:intergenic | 30.0% | |
| GTAAACTTATGTGATTGAAG+GGG | - | chr4_4:14874893-14874912 | None:intergenic | 30.0% | |
| CGTAAACTTATGTGATTGAA+GGG | - | chr4_4:14874894-14874913 | None:intergenic | 30.0% | |
| ACGTAAACTTATGTGATTGA+AGG | - | chr4_4:14874895-14874914 | None:intergenic | 30.0% | |
| GGGAAAAGAAAATGGAAAAA+GGG | - | chr4_4:14874998-14875017 | None:intergenic | 30.0% | |
| AGGGAAAAGAAAATGGAAAA+AGG | - | chr4_4:14874999-14875018 | None:intergenic | 30.0% | |
| TACAAAGAGGGAAAAGAAAA+TGG | - | chr4_4:14875006-14875025 | None:intergenic | 30.0% | |
| ! | CATATTTTGTGATGTGATTG+CGG | - | chr4_4:14875070-14875089 | None:intergenic | 30.0% |
| ATTACAGTGTGAGAAATTCA+AGG | + | chr4_4:14875233-14875252 | Msa0671490:intron | 30.0% | |
| CATGTAAAAATGTATGGCAA+AGG | + | chr4_4:14875610-14875629 | Msa0671490:CDS | 30.0% | |
| TTCTTGGTTTAAATGGAACA+TGG | + | chr4_4:14875641-14875660 | Msa0671490:CDS | 30.0% | |
| TATCTATGAGTTTGATCCAA+CGG | - | chr4_4:14875797-14875816 | None:intergenic | 30.0% | |
| ! | AGTGTCTATGTAAGCTTTTA+AGG | - | chr4_4:14874566-14874585 | None:intergenic | 30.0% |
| !! | TACTTGTTGTTGAGGTTTAA+AGG | - | chr4_4:14874605-14874624 | None:intergenic | 30.0% |
| !! | ATTGATCTTACTTGTTGTTG+AGG | - | chr4_4:14874613-14874632 | None:intergenic | 30.0% |
| TACAAAGAGGGAAACTAAAA+TGG | - | chr4_4:14874728-14874747 | None:intergenic | 30.0% | |
| GTAAACTTATGTGATTGAAG+GGG | - | chr4_4:14874893-14874912 | None:intergenic | 30.0% | |
| CGTAAACTTATGTGATTGAA+GGG | - | chr4_4:14874894-14874913 | None:intergenic | 30.0% | |
| ACGTAAACTTATGTGATTGA+AGG | - | chr4_4:14874895-14874914 | None:intergenic | 30.0% | |
| GGGAAAAGAAAATGGAAAAA+GGG | - | chr4_4:14874998-14875017 | None:intergenic | 30.0% | |
| AGGGAAAAGAAAATGGAAAA+AGG | - | chr4_4:14874999-14875018 | None:intergenic | 30.0% | |
| TACAAAGAGGGAAAAGAAAA+TGG | - | chr4_4:14875006-14875025 | None:intergenic | 30.0% | |
| ! | CATATTTTGTGATGTGATTG+CGG | - | chr4_4:14875070-14875089 | None:intergenic | 30.0% |
| ATTACAGTGTGAGAAATTCA+AGG | + | chr4_4:14875233-14875252 | Msa0671490:intron | 30.0% | |
| CATGTAAAAATGTATGGCAA+AGG | + | chr4_4:14875610-14875629 | Msa0671490:CDS | 30.0% | |
| TTCTTGGTTTAAATGGAACA+TGG | + | chr4_4:14875641-14875660 | Msa0671490:CDS | 30.0% | |
| TATCTATGAGTTTGATCCAA+CGG | - | chr4_4:14875797-14875816 | None:intergenic | 30.0% | |
| !!! | TAAGCTTTTAAGGCAGTTTC+TGG | - | chr4_4:14874556-14874575 | None:intergenic | 35.0% |
| !! | TTGAGGTTTAAAGGTGCTTA+CGG | - | chr4_4:14874596-14874615 | None:intergenic | 35.0% |
| AAGGGACAAAGAAAGAAGAA+GGG | - | chr4_4:14874697-14874716 | None:intergenic | 35.0% | |
| AAAGGGACAAAGAAAGAAGA+AGG | - | chr4_4:14874698-14874717 | None:intergenic | 35.0% | |
| CGCAATCACATCACAAAATA+TGG | + | chr4_4:14875068-14875087 | Msa0671490:intron | 35.0% | |
| TGTGAGAAATTCAAGGAATC+TGG | + | chr4_4:14875240-14875259 | Msa0671490:CDS | 35.0% | |
| ATCGTAGAATGTTATTCCCA+CGG | + | chr4_4:14875312-14875331 | Msa0671490:CDS | 35.0% | |
| !!! | ATTTTCTTGTGGTGGATTGT+AGG | + | chr4_4:14875526-14875545 | Msa0671490:CDS | 35.0% |
| !!! | GTTTTTTTGCCTGTTGGAAA+GGG | + | chr4_4:14875696-14875715 | Msa0671490:CDS | 35.0% |
| GGTTTGGATATTGCTTACAT+AGG | + | chr4_4:14875717-14875736 | Msa0671490:CDS | 35.0% | |
| GCTTACATAGGAAGTAGAAT+TGG | + | chr4_4:14875729-14875748 | Msa0671490:CDS | 35.0% | |
| TACATAGGAAGTAGAATTGG+TGG | + | chr4_4:14875732-14875751 | Msa0671490:CDS | 35.0% | |
| !!! | TAAGCTTTTAAGGCAGTTTC+TGG | - | chr4_4:14874556-14874575 | None:intergenic | 35.0% |
| !! | TTGAGGTTTAAAGGTGCTTA+CGG | - | chr4_4:14874596-14874615 | None:intergenic | 35.0% |
| AAGGGACAAAGAAAGAAGAA+GGG | - | chr4_4:14874697-14874716 | None:intergenic | 35.0% | |
| AAAGGGACAAAGAAAGAAGA+AGG | - | chr4_4:14874698-14874717 | None:intergenic | 35.0% | |
| CGCAATCACATCACAAAATA+TGG | + | chr4_4:14875068-14875087 | Msa0671490:intron | 35.0% | |
| TGTGAGAAATTCAAGGAATC+TGG | + | chr4_4:14875240-14875259 | Msa0671490:CDS | 35.0% | |
| ATCGTAGAATGTTATTCCCA+CGG | + | chr4_4:14875312-14875331 | Msa0671490:CDS | 35.0% | |
| !!! | ATTTTCTTGTGGTGGATTGT+AGG | + | chr4_4:14875526-14875545 | Msa0671490:CDS | 35.0% |
| !!! | GTTTTTTTGCCTGTTGGAAA+GGG | + | chr4_4:14875696-14875715 | Msa0671490:CDS | 35.0% |
| GGTTTGGATATTGCTTACAT+AGG | + | chr4_4:14875717-14875736 | Msa0671490:CDS | 35.0% | |
| GCTTACATAGGAAGTAGAAT+TGG | + | chr4_4:14875729-14875748 | Msa0671490:CDS | 35.0% | |
| TACATAGGAAGTAGAATTGG+TGG | + | chr4_4:14875732-14875751 | Msa0671490:CDS | 35.0% | |
| !! | GATGAATTTGGTGTTCCATC+CGG | - | chr4_4:14875295-14875314 | None:intergenic | 40.0% |
| ACGGTGATCAAAAGTCTTGA+TGG | + | chr4_4:14875498-14875517 | Msa0671490:CDS | 40.0% | |
| CGGTGATCAAAAGTCTTGAT+GGG | + | chr4_4:14875499-14875518 | Msa0671490:CDS | 40.0% | |
| ! | GATCAAAAGTCTTGATGGGT+TGG | + | chr4_4:14875503-14875522 | Msa0671490:CDS | 40.0% |
| !!! | TGATGGGTTGGATTTTCTTG+TGG | + | chr4_4:14875515-14875534 | Msa0671490:CDS | 40.0% |
| ! | TAGGCTTAGGGATTTTGCTA+GGG | + | chr4_4:14875545-14875564 | Msa0671490:CDS | 40.0% |
| ! | GGATTTTGCTAGGGTTCTTA+AGG | + | chr4_4:14875554-14875573 | Msa0671490:CDS | 40.0% |
| TAGGGTTCTTAAGGTTGCAA+AGG | + | chr4_4:14875563-14875582 | Msa0671490:CDS | 40.0% | |
| TTGCAAAGGTGAGTACTAGA+GGG | + | chr4_4:14875577-14875596 | Msa0671490:CDS | 40.0% | |
| GGCAAAGGTCAAATGTTTCT+TGG | + | chr4_4:14875625-14875644 | Msa0671490:CDS | 40.0% | |
| TGGAACATGGTTCTTGAAAG+AGG | + | chr4_4:14875654-14875673 | Msa0671490:CDS | 40.0% | |
| !!! | AGATCGGTTTTTTTGCCTGT+TGG | + | chr4_4:14875690-14875709 | Msa0671490:CDS | 40.0% |
| !!! | GGTTTTTTTGCCTGTTGGAA+AGG | + | chr4_4:14875695-14875714 | Msa0671490:CDS | 40.0% |
| ATATCCAAACCCTTTCCAAC+AGG | - | chr4_4:14875708-14875727 | None:intergenic | 40.0% | |
| ATAGGAAGTAGAATTGGTGG+TGG | + | chr4_4:14875735-14875754 | Msa0671490:CDS | 40.0% | |
| AGCTTCAAGTAGTGCTTCAA+AGG | + | chr4_4:14875761-14875780 | Msa0671490:CDS | 40.0% | |
| GCTTCAAGTAGTGCTTCAAA+GGG | + | chr4_4:14875762-14875781 | Msa0671490:CDS | 40.0% | |
| !! | GATGAATTTGGTGTTCCATC+CGG | - | chr4_4:14875295-14875314 | None:intergenic | 40.0% |
| ACGGTGATCAAAAGTCTTGA+TGG | + | chr4_4:14875498-14875517 | Msa0671490:CDS | 40.0% | |
| CGGTGATCAAAAGTCTTGAT+GGG | + | chr4_4:14875499-14875518 | Msa0671490:CDS | 40.0% | |
| ! | GATCAAAAGTCTTGATGGGT+TGG | + | chr4_4:14875503-14875522 | Msa0671490:CDS | 40.0% |
| !!! | TGATGGGTTGGATTTTCTTG+TGG | + | chr4_4:14875515-14875534 | Msa0671490:CDS | 40.0% |
| ! | TAGGCTTAGGGATTTTGCTA+GGG | + | chr4_4:14875545-14875564 | Msa0671490:CDS | 40.0% |
| ! | GGATTTTGCTAGGGTTCTTA+AGG | + | chr4_4:14875554-14875573 | Msa0671490:CDS | 40.0% |
| TAGGGTTCTTAAGGTTGCAA+AGG | + | chr4_4:14875563-14875582 | Msa0671490:CDS | 40.0% | |
| TTGCAAAGGTGAGTACTAGA+GGG | + | chr4_4:14875577-14875596 | Msa0671490:CDS | 40.0% | |
| GGCAAAGGTCAAATGTTTCT+TGG | + | chr4_4:14875625-14875644 | Msa0671490:CDS | 40.0% | |
| TGGAACATGGTTCTTGAAAG+AGG | + | chr4_4:14875654-14875673 | Msa0671490:CDS | 40.0% | |
| !!! | AGATCGGTTTTTTTGCCTGT+TGG | + | chr4_4:14875690-14875709 | Msa0671490:CDS | 40.0% |
| !!! | GGTTTTTTTGCCTGTTGGAA+AGG | + | chr4_4:14875695-14875714 | Msa0671490:CDS | 40.0% |
| ATATCCAAACCCTTTCCAAC+AGG | - | chr4_4:14875708-14875727 | None:intergenic | 40.0% | |
| ATAGGAAGTAGAATTGGTGG+TGG | + | chr4_4:14875735-14875754 | Msa0671490:CDS | 40.0% | |
| AGCTTCAAGTAGTGCTTCAA+AGG | + | chr4_4:14875761-14875780 | Msa0671490:CDS | 40.0% | |
| GCTTCAAGTAGTGCTTCAAA+GGG | + | chr4_4:14875762-14875781 | Msa0671490:CDS | 40.0% | |
| AGCTGAGCTTCTATCATCCA+TGG | + | chr4_4:14875266-14875285 | Msa0671490:CDS | 45.0% | |
| GTAGAATGTTATTCCCACGG+CGG | + | chr4_4:14875315-14875334 | Msa0671490:CDS | 45.0% | |
| TGTGCATAGTCCCAGATGAA+GGG | + | chr4_4:14875397-14875416 | Msa0671490:CDS | 45.0% | |
| GCAATCTTGACCCTTCATCT+GGG | - | chr4_4:14875410-14875429 | None:intergenic | 45.0% | |
| TGCAATCTTGACCCTTCATC+TGG | - | chr4_4:14875411-14875430 | None:intergenic | 45.0% | |
| !! | TGGGTTGGATTTTCTTGTGG+TGG | + | chr4_4:14875518-14875537 | Msa0671490:CDS | 45.0% |
| !! | TTGTGGTGGATTGTAGGCTT+AGG | + | chr4_4:14875532-14875551 | Msa0671490:CDS | 45.0% |
| !! | TGTGGTGGATTGTAGGCTTA+GGG | + | chr4_4:14875533-14875552 | Msa0671490:CDS | 45.0% |
| ! | GTAGGCTTAGGGATTTTGCT+AGG | + | chr4_4:14875544-14875563 | Msa0671490:CDS | 45.0% |
| GTTGCAAAGGTGAGTACTAG+AGG | + | chr4_4:14875576-14875595 | Msa0671490:CDS | 45.0% | |
| TGCAAAGGTGAGTACTAGAG+GGG | + | chr4_4:14875578-14875597 | Msa0671490:CDS | 45.0% | |
| TTTGCCTGTTGGAAAGGGTT+TGG | + | chr4_4:14875701-14875720 | Msa0671490:CDS | 45.0% | |
| ATGAGTTTGATCCAACGGCT+AGG | - | chr4_4:14875792-14875811 | None:intergenic | 45.0% | |
| AGCTGAGCTTCTATCATCCA+TGG | + | chr4_4:14875266-14875285 | Msa0671490:CDS | 45.0% | |
| GTAGAATGTTATTCCCACGG+CGG | + | chr4_4:14875315-14875334 | Msa0671490:CDS | 45.0% | |
| TGTGCATAGTCCCAGATGAA+GGG | + | chr4_4:14875397-14875416 | Msa0671490:CDS | 45.0% | |
| GCAATCTTGACCCTTCATCT+GGG | - | chr4_4:14875410-14875429 | None:intergenic | 45.0% | |
| TGCAATCTTGACCCTTCATC+TGG | - | chr4_4:14875411-14875430 | None:intergenic | 45.0% | |
| !! | TGGGTTGGATTTTCTTGTGG+TGG | + | chr4_4:14875518-14875537 | Msa0671490:CDS | 45.0% |
| !! | TTGTGGTGGATTGTAGGCTT+AGG | + | chr4_4:14875532-14875551 | Msa0671490:CDS | 45.0% |
| !! | TGTGGTGGATTGTAGGCTTA+GGG | + | chr4_4:14875533-14875552 | Msa0671490:CDS | 45.0% |
| ! | GTAGGCTTAGGGATTTTGCT+AGG | + | chr4_4:14875544-14875563 | Msa0671490:CDS | 45.0% |
| GTTGCAAAGGTGAGTACTAG+AGG | + | chr4_4:14875576-14875595 | Msa0671490:CDS | 45.0% | |
| TGCAAAGGTGAGTACTAGAG+GGG | + | chr4_4:14875578-14875597 | Msa0671490:CDS | 45.0% | |
| TTTGCCTGTTGGAAAGGGTT+TGG | + | chr4_4:14875701-14875720 | Msa0671490:CDS | 45.0% | |
| ATGAGTTTGATCCAACGGCT+AGG | - | chr4_4:14875792-14875811 | None:intergenic | 45.0% | |
| !! | ATAATATATATTTGAAAAAT+TGG | - | chr4_4:14874771-14874790 | None:intergenic | 5.0% |
| !! | ATAATATATATTTGAAAAAT+TGG | - | chr4_4:14874771-14874790 | None:intergenic | 5.0% |
| CTTCTATCATCCATGGCAGC+CGG | + | chr4_4:14875273-14875292 | Msa0671490:CDS | 50.0% | |
| AACTGCTAGGCCAACACTTG+CGG | - | chr4_4:14875349-14875368 | None:intergenic | 50.0% | |
| TATGCACACGTGTCTTGCAC+CGG | - | chr4_4:14875385-14875404 | None:intergenic | 50.0% | |
| GTGTGCATAGTCCCAGATGA+AGG | + | chr4_4:14875396-14875415 | Msa0671490:CDS | 50.0% | |
| ACAAAAGCCCTAGCCGAGAT+GGG | + | chr4_4:14875435-14875454 | Msa0671490:CDS | 50.0% | |
| GCTTCACCGAGAACTATCTC+CGG | - | chr4_4:14875474-14875493 | None:intergenic | 50.0% | |
| AGTTCTCGGTGAAGCGCAAA+CGG | + | chr4_4:14875479-14875498 | Msa0671490:CDS | 50.0% | |
| ! | GAGTACTAGAGGGGCAGTTT+TGG | + | chr4_4:14875587-14875606 | Msa0671490:CDS | 50.0% |
| ! | TCTTGAAAGAGGCACACGTG+TGG | + | chr4_4:14875665-14875684 | Msa0671490:CDS | 50.0% |
| AGGCACACGTGTGGTTAGAT+CGG | + | chr4_4:14875674-14875693 | Msa0671490:CDS | 50.0% | |
| CTTCTATCATCCATGGCAGC+CGG | + | chr4_4:14875273-14875292 | Msa0671490:CDS | 50.0% | |
| AACTGCTAGGCCAACACTTG+CGG | - | chr4_4:14875349-14875368 | None:intergenic | 50.0% | |
| TATGCACACGTGTCTTGCAC+CGG | - | chr4_4:14875385-14875404 | None:intergenic | 50.0% | |
| GTGTGCATAGTCCCAGATGA+AGG | + | chr4_4:14875396-14875415 | Msa0671490:CDS | 50.0% | |
| ACAAAAGCCCTAGCCGAGAT+GGG | + | chr4_4:14875435-14875454 | Msa0671490:CDS | 50.0% | |
| GCTTCACCGAGAACTATCTC+CGG | - | chr4_4:14875474-14875493 | None:intergenic | 50.0% | |
| AGTTCTCGGTGAAGCGCAAA+CGG | + | chr4_4:14875479-14875498 | Msa0671490:CDS | 50.0% | |
| ! | GAGTACTAGAGGGGCAGTTT+TGG | + | chr4_4:14875587-14875606 | Msa0671490:CDS | 50.0% |
| ! | TCTTGAAAGAGGCACACGTG+TGG | + | chr4_4:14875665-14875684 | Msa0671490:CDS | 50.0% |
| AGGCACACGTGTGGTTAGAT+CGG | + | chr4_4:14875674-14875693 | Msa0671490:CDS | 50.0% | |
| TATCATCCATGGCAGCCGGA+TGG | + | chr4_4:14875277-14875296 | Msa0671490:CDS | 55.0% | |
| GGTCCAATAGCCGCAAGTGT+TGG | + | chr4_4:14875336-14875355 | Msa0671490:CDS | 55.0% | |
| AGGCCAACACTTGCGGCTAT+TGG | - | chr4_4:14875342-14875361 | None:intergenic | 55.0% | |
| TGTTGCGAGCAGCAACTGCT+AGG | - | chr4_4:14875362-14875381 | None:intergenic | 55.0% | |
| CACAAAAGCCCTAGCCGAGA+TGG | + | chr4_4:14875434-14875453 | Msa0671490:CDS | 55.0% | |
| GGATACACCCATCTCGGCTA+GGG | - | chr4_4:14875445-14875464 | None:intergenic | 55.0% | |
| ACCGAGAACTATCTCCGGTG+GGG | - | chr4_4:14875469-14875488 | None:intergenic | 55.0% | |
| CACCGAGAACTATCTCCGGT+GGG | - | chr4_4:14875470-14875489 | None:intergenic | 55.0% | |
| TCACCGAGAACTATCTCCGG+TGG | - | chr4_4:14875471-14875490 | None:intergenic | 55.0% | |
| !! | CAAAGGGTACTCCTAGCCGT+TGG | + | chr4_4:14875778-14875797 | Msa0671490:CDS | 55.0% |
| TATCATCCATGGCAGCCGGA+TGG | + | chr4_4:14875277-14875296 | Msa0671490:CDS | 55.0% | |
| GGTCCAATAGCCGCAAGTGT+TGG | + | chr4_4:14875336-14875355 | Msa0671490:CDS | 55.0% | |
| AGGCCAACACTTGCGGCTAT+TGG | - | chr4_4:14875342-14875361 | None:intergenic | 55.0% | |
| TGTTGCGAGCAGCAACTGCT+AGG | - | chr4_4:14875362-14875381 | None:intergenic | 55.0% | |
| CACAAAAGCCCTAGCCGAGA+TGG | + | chr4_4:14875434-14875453 | Msa0671490:CDS | 55.0% | |
| GGATACACCCATCTCGGCTA+GGG | - | chr4_4:14875445-14875464 | None:intergenic | 55.0% | |
| ACCGAGAACTATCTCCGGTG+GGG | - | chr4_4:14875469-14875488 | None:intergenic | 55.0% | |
| CACCGAGAACTATCTCCGGT+GGG | - | chr4_4:14875470-14875489 | None:intergenic | 55.0% | |
| TCACCGAGAACTATCTCCGG+TGG | - | chr4_4:14875471-14875490 | None:intergenic | 55.0% | |
| !! | CAAAGGGTACTCCTAGCCGT+TGG | + | chr4_4:14875778-14875797 | Msa0671490:CDS | 55.0% |
| GCAGTTGCTGCTCGCAACAC+CGG | + | chr4_4:14875363-14875382 | Msa0671490:CDS | 60.0% | |
| GGGATACACCCATCTCGGCT+AGG | - | chr4_4:14875446-14875465 | None:intergenic | 60.0% | |
| TGGGGGGGATACACCCATCT+CGG | - | chr4_4:14875451-14875470 | None:intergenic | 60.0% | |
| GAGAACTATCTCCGGTGGGG+GGG | - | chr4_4:14875466-14875485 | None:intergenic | 60.0% | |
| CGAGAACTATCTCCGGTGGG+GGG | - | chr4_4:14875467-14875486 | None:intergenic | 60.0% | |
| CCGAGAACTATCTCCGGTGG+GGG | - | chr4_4:14875468-14875487 | None:intergenic | 60.0% | |
| CCCCCACCGGAGATAGTTCT+CGG | + | chr4_4:14875465-14875484 | Msa0671490:CDS | 60.0% | |
| GCAGTTGCTGCTCGCAACAC+CGG | + | chr4_4:14875363-14875382 | Msa0671490:CDS | 60.0% | |
| GGGATACACCCATCTCGGCT+AGG | - | chr4_4:14875446-14875465 | None:intergenic | 60.0% | |
| TGGGGGGGATACACCCATCT+CGG | - | chr4_4:14875451-14875470 | None:intergenic | 60.0% | |
| GAGAACTATCTCCGGTGGGG+GGG | - | chr4_4:14875466-14875485 | None:intergenic | 60.0% | |
| CGAGAACTATCTCCGGTGGG+GGG | - | chr4_4:14875467-14875486 | None:intergenic | 60.0% | |
| CCGAGAACTATCTCCGGTGG+GGG | - | chr4_4:14875468-14875487 | None:intergenic | 60.0% | |
| CCCCCACCGGAGATAGTTCT+CGG | + | chr4_4:14875465-14875484 | Msa0671490:CDS | 60.0% | |
| GGTGTTCCATCCGGCTGCCA+TGG | - | chr4_4:14875286-14875305 | None:intergenic | 65.0% | |
| TGCGGCTATTGGACCGCCGT+GGG | - | chr4_4:14875331-14875350 | None:intergenic | 65.0% | |
| TTGCGGCTATTGGACCGCCG+TGG | - | chr4_4:14875332-14875351 | None:intergenic | 65.0% | |
| GATGGGTGTATCCCCCCCAC+CGG | + | chr4_4:14875452-14875471 | Msa0671490:CDS | 65.0% | |
| GGTGTTCCATCCGGCTGCCA+TGG | - | chr4_4:14875286-14875305 | None:intergenic | 65.0% | |
| TGCGGCTATTGGACCGCCGT+GGG | - | chr4_4:14875331-14875350 | None:intergenic | 65.0% | |
| TTGCGGCTATTGGACCGCCG+TGG | - | chr4_4:14875332-14875351 | None:intergenic | 65.0% | |
| GATGGGTGTATCCCCCCCAC+CGG | + | chr4_4:14875452-14875471 | Msa0671490:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 14874535 | 14875851 | 14874535 | ID=Msa0671490;Name=Msa0671490 |
| chr4_4 | mRNA | 14874535 | 14875851 | 14874535 | ID=Msa0671490-mRNA-1;Parent=Msa0671490;Name=Msa0671490-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|0|0|1|1|1|2|0|232 |
| chr4_4 | exon | 14874535 | 14874621 | 14874535 | ID=Msa0671490-mRNA-1:exon:4514;Parent=Msa0671490-mRNA-1 |
| chr4_4 | exon | 14875240 | 14875851 | 14875240 | ID=Msa0671490-mRNA-1:exon:4515;Parent=Msa0671490-mRNA-1 |
| chr4_4 | CDS | 14874535 | 14874621 | 14874535 | ID=Msa0671490-mRNA-1:cds;Parent=Msa0671490-mRNA-1 |
| chr4_4 | CDS | 14875240 | 14875851 | 14875240 | ID=Msa0671490-mRNA-1:cds;Parent=Msa0671490-mRNA-1 |
| Gene Sequence |
| Protein sequence |
