Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0199860 | AAV66071.1 | 87.842 | 329 | 0 | 1 | 1 | 289 | 42 | 370 | 0.0 | 573 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0199860 | sp|Q03467|E13B_PEA | 80.909 | 330 | 22 | 2 | 1 | 289 | 41 | 370 | 0.0 | 538 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0199860 | Q5RLY0 | 87.842 | 329 | 0 | 1 | 1 | 289 | 42 | 370 | 0.0 | 573 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0025370 | Msa0199860 | 0.800936 | 1.140571e-48 | -8.615850e-47 |
| Msa0036580 | Msa0199860 | 0.838752 | 2.386387e-57 | -8.615850e-47 |
| Msa0048950 | Msa0199860 | 0.809629 | 1.721805e-50 | -8.615850e-47 |
| Msa0059880 | Msa0199860 | 0.857400 | 1.675573e-62 | -8.615850e-47 |
| Msa0061600 | Msa0199860 | 0.817457 | 3.264411e-52 | -8.615850e-47 |
| Msa0093530 | Msa0199860 | 0.827303 | 1.685844e-54 | -8.615850e-47 |
| Msa0106130 | Msa0199860 | 0.807743 | 4.354626e-50 | -8.615850e-47 |
| Msa0126960 | Msa0199860 | 0.825632 | 4.217813e-54 | -8.615850e-47 |
| Msa0139270 | Msa0199860 | 0.846347 | 2.299253e-59 | -8.615850e-47 |
| Msa0150910 | Msa0199860 | 0.829460 | 5.085821e-55 | -8.615850e-47 |
| Msa0155850 | Msa0199860 | 0.815891 | 7.328165e-52 | -8.615850e-47 |
| Msa0176620 | Msa0199860 | 0.845630 | 3.603405e-59 | -8.615850e-47 |
| Msa0197750 | Msa0199860 | 0.816141 | 6.442917e-52 | -8.615850e-47 |
| Msa0199860 | Msa0200090 | 0.803935 | 2.749061e-49 | -8.615850e-47 |
| Msa0199860 | Msa0202060 | 0.813432 | 2.567619e-51 | -8.615850e-47 |
| Msa0199860 | Msa0207930 | 0.817247 | 3.641328e-52 | -8.615850e-47 |
| Msa0199860 | Msa0207970 | 0.855482 | 6.124379e-62 | -8.615850e-47 |
| Msa0199860 | Msa0214630 | 0.802902 | 4.500460e-49 | -8.615850e-47 |
| Msa0199860 | Msa0225910 | 0.810538 | 1.096745e-50 | -8.615850e-47 |
| Msa0199860 | Msa0234120 | 0.815577 | 8.608674e-52 | -8.615850e-47 |
| Msa0199860 | Msa0236610 | 0.807155 | 5.802869e-50 | -8.615850e-47 |
| Msa0199860 | Msa0242390 | 0.912880 | 1.172274e-83 | -8.615850e-47 |
| Msa0199860 | Msa0242700 | 0.808876 | 2.496937e-50 | -8.615850e-47 |
| Msa0199860 | Msa0243970 | 0.807473 | 4.968680e-50 | -8.615850e-47 |
| Msa0199860 | Msa0243990 | 0.822654 | 2.109824e-53 | -8.615850e-47 |
| Msa0199860 | Msa0255010 | 0.822268 | 2.594473e-53 | -8.615850e-47 |
| Msa0199860 | Msa0257930 | 0.835561 | 1.562065e-56 | -8.615850e-47 |
| Msa0199860 | Msa0266640 | 0.845630 | 3.602177e-59 | -8.615850e-47 |
| Msa0199860 | Msa0266650 | 0.861208 | 1.205809e-63 | -8.615850e-47 |
| Msa0199860 | Msa0274260 | 0.826040 | 3.374778e-54 | -8.615850e-47 |
| Msa0199860 | Msa0275570 | 0.812984 | 3.220520e-51 | -8.615850e-47 |
| Msa0199860 | Msa0278950 | 0.814830 | 1.261238e-51 | -8.615850e-47 |
| Msa0199860 | Msa0283440 | 0.818136 | 2.294552e-52 | -8.615850e-47 |
| Msa0199860 | Msa0296930 | 0.814276 | 1.673370e-51 | -8.615850e-47 |
| Msa0199860 | Msa0318370 | 0.844379 | 7.843258e-59 | -8.615850e-47 |
| Msa0199860 | Msa0319830 | 0.844683 | 6.496503e-59 | -8.615850e-47 |
| Msa0199860 | Msa0320140 | 0.800488 | 1.407709e-48 | -8.615850e-47 |
| Msa0199860 | Msa0356200 | 0.802901 | 4.502901e-49 | -8.615850e-47 |
| Msa0199860 | Msa0378240 | 0.827874 | 1.229294e-54 | -8.615850e-47 |
| Msa0199860 | Msa0388260 | 0.808663 | 2.772980e-50 | -8.615850e-47 |
| Msa0199860 | Msa0393900 | 0.817261 | 3.613562e-52 | -8.615850e-47 |
| Msa0199860 | Msa0398690 | 0.861661 | 8.768352e-64 | -8.615850e-47 |
| Msa0199860 | Msa0427740 | 0.816545 | 5.232793e-52 | -8.615850e-47 |
| Msa0199860 | Msa0427970 | 0.810999 | 8.716412e-51 | -8.615850e-47 |
| Msa0199860 | Msa0464310 | 0.801111 | 1.050311e-48 | -8.615850e-47 |
| Msa0199860 | Msa0473940 | 0.803319 | 3.689354e-49 | -8.615850e-47 |
| Msa0199860 | Msa0485290 | 0.806716 | 7.184738e-50 | -8.615850e-47 |
| Msa0199860 | Msa0493710 | 0.825628 | 4.225470e-54 | -8.615850e-47 |
| Msa0199860 | Msa0518340 | 0.809365 | 1.961900e-50 | -8.615850e-47 |
| Msa0199860 | Msa0518570 | 0.814247 | 1.697678e-51 | -8.615850e-47 |
| Msa0199860 | Msa0533510 | 0.850992 | 1.185707e-60 | -8.615850e-47 |
| Msa0199860 | Msa0533520 | 0.862340 | 5.432297e-64 | -8.615850e-47 |
| Msa0199860 | Msa0538440 | 0.820549 | 6.467077e-53 | -8.615850e-47 |
| Msa0199860 | Msa0538450 | 0.832623 | 8.503339e-56 | -8.615850e-47 |
| Msa0199860 | Msa0538520 | 0.822326 | 2.515260e-53 | -8.615850e-47 |
| Msa0199860 | Msa0538530 | 0.822006 | 2.983607e-53 | -8.615850e-47 |
| Msa0199860 | Msa0546760 | 0.801717 | 7.894487e-49 | -8.615850e-47 |
| Msa0199860 | Msa0548760 | 0.827489 | 1.521189e-54 | -8.615850e-47 |
| Msa0199860 | Msa0548770 | 0.802018 | 6.846347e-49 | -8.615850e-47 |
| Msa0199860 | Msa0548970 | 0.803606 | 3.217178e-49 | -8.615850e-47 |
| Msa0199860 | Msa0589720 | 0.843485 | 1.361326e-58 | -8.615850e-47 |
| Msa0199860 | Msa0589730 | 0.851442 | 8.851210e-61 | -8.615850e-47 |
| Msa0199860 | Msa0589740 | 0.803754 | 2.998140e-49 | -8.615850e-47 |
| Msa0199860 | Msa0589750 | 0.817289 | 3.561808e-52 | -8.615850e-47 |
| Msa0199860 | Msa0594320 | 0.837648 | 4.592121e-57 | -8.615850e-47 |
| Msa0199860 | Msa0594330 | 0.846272 | 2.410902e-59 | -8.615850e-47 |
| Msa0199860 | Msa0599600 | 0.811624 | 6.379331e-51 | -8.615850e-47 |
| Msa0199860 | Msa0605460 | 0.802459 | 5.553652e-49 | -8.615850e-47 |
| Msa0199860 | Msa0629030 | 0.822697 | 2.062297e-53 | -8.615850e-47 |
| Msa0199860 | Msa0630130 | 0.838699 | 2.462750e-57 | -8.615850e-47 |
| Msa0199860 | Msa0634290 | 0.820714 | 5.927508e-53 | -8.615850e-47 |
| Msa0199860 | Msa0639400 | 0.803483 | 3.412307e-49 | -8.615850e-47 |
| Msa0199860 | Msa0639410 | 0.813374 | 2.643941e-51 | -8.615850e-47 |
| Msa0199860 | Msa0645100 | 0.826751 | 2.284690e-54 | -8.615850e-47 |
| Msa0199860 | Msa0645120 | 0.844930 | 5.571509e-59 | -8.615850e-47 |
| Msa0199860 | Msa0657260 | 0.807257 | 5.522863e-50 | -8.615850e-47 |
| Msa0199860 | Msa0666580 | 0.814481 | 1.507469e-51 | -8.615850e-47 |
| Msa0199860 | Msa0668210 | 0.843952 | 1.020652e-58 | -8.615850e-47 |
| Msa0199860 | Msa0668220 | 0.840465 | 8.557200e-58 | -8.615850e-47 |
| Msa0199860 | Msa0668230 | 0.844762 | 6.185046e-59 | -8.615850e-47 |
| Msa0199860 | Msa0670360 | 0.810048 | 1.398917e-50 | -8.615850e-47 |
| Msa0199860 | Msa0678620 | 0.808142 | 3.580755e-50 | -8.615850e-47 |
| Msa0199860 | Msa0682420 | 0.804152 | 2.477781e-49 | -8.615850e-47 |
| Msa0199860 | Msa0684590 | 0.841926 | 3.532063e-58 | -8.615850e-47 |
| Msa0199860 | Msa0684600 | 0.856256 | 3.639216e-62 | -8.615850e-47 |
| Msa0199860 | Msa0684720 | 0.808733 | 2.679364e-50 | -8.615850e-47 |
| Msa0199860 | Msa0694690 | 0.812157 | 4.883600e-51 | -8.615850e-47 |
| Msa0199860 | Msa0701490 | 0.803574 | 3.267341e-49 | -8.615850e-47 |
| Msa0199860 | Msa0701560 | 0.806366 | 8.517604e-50 | -8.615850e-47 |
| Msa0199860 | Msa0715260 | 0.839067 | 1.977127e-57 | -8.615850e-47 |
| Msa0199860 | Msa0716600 | 0.800905 | 1.157535e-48 | -8.615850e-47 |
| Msa0199860 | Msa0721260 | 0.878026 | 3.915860e-69 | -8.615850e-47 |
| Msa0199860 | Msa0728520 | 0.846973 | 1.551596e-59 | -8.615850e-47 |
| Msa0199860 | Msa0735280 | 0.820325 | 7.281266e-53 | -8.615850e-47 |
| Msa0199860 | Msa0738570 | 0.806839 | 6.767537e-50 | -8.615850e-47 |
| Msa0199860 | Msa0738660 | 0.862875 | 3.717984e-64 | -8.615850e-47 |
| Msa0199860 | Msa0747500 | 0.869809 | 2.343232e-66 | -8.615850e-47 |
| Msa0199860 | Msa0753410 | 0.843760 | 1.149120e-58 | -8.615850e-47 |
| Msa0199860 | Msa0754530 | 0.802265 | 6.089478e-49 | -8.615850e-47 |
| Msa0199860 | Msa0757240 | 0.839793 | 1.280762e-57 | -8.615850e-47 |
| Msa0199860 | Msa0776540 | 0.848811 | 4.829923e-60 | -8.615850e-47 |
| Msa0199860 | Msa0777070 | 0.822241 | 2.632357e-53 | -8.615850e-47 |
| Msa0199860 | Msa0787860 | 0.838226 | 3.261824e-57 | -8.615850e-47 |
| Msa0199860 | Msa0793570 | 0.800555 | 1.364027e-48 | -8.615850e-47 |
| Msa0199860 | Msa0795330 | 0.862364 | 5.340567e-64 | -8.615850e-47 |
| Msa0199860 | Msa0798230 | 0.832453 | 9.372127e-56 | -8.615850e-47 |
| Msa0199860 | Msa0814160 | 0.812540 | 4.027906e-51 | -8.615850e-47 |
| Msa0199860 | Msa0816140 | 0.811921 | 5.497782e-51 | -8.615850e-47 |
| Msa0199860 | Msa0819110 | 0.805717 | 1.166746e-49 | -8.615850e-47 |
| Msa0199860 | Msa0824850 | 0.816572 | 5.159761e-52 | -8.615850e-47 |
| Msa0199860 | Msa0824860 | 0.810408 | 1.170047e-50 | -8.615850e-47 |
| Msa0199860 | Msa0833230 | 0.811609 | 6.427222e-51 | -8.615850e-47 |
| Msa0199860 | Msa0836740 | 0.837079 | 6.420704e-57 | -8.615850e-47 |
| Msa0199860 | Msa0854840 | 0.833625 | 4.788733e-56 | -8.615850e-47 |
| Msa0199860 | Msa0859230 | 0.816367 | 5.735388e-52 | -8.615850e-47 |
| Msa0199860 | Msa0859250 | 0.805576 | 1.248904e-49 | -8.615850e-47 |
| Msa0199860 | Msa0863840 | 0.814277 | 1.672100e-51 | -8.615850e-47 |
| Msa0199860 | Msa0863850 | 0.829099 | 6.222606e-55 | -8.615850e-47 |
| Msa0199860 | Msa0863860 | 0.824928 | 6.186770e-54 | -8.615850e-47 |
| Msa0199860 | Msa0864160 | 0.823906 | 1.076149e-53 | -8.615850e-47 |
| Msa0199860 | Msa0868820 | 0.809301 | 2.025140e-50 | -8.615850e-47 |
| Msa0199860 | Msa0883610 | 0.838244 | 3.226527e-57 | -8.615850e-47 |
| Msa0199860 | Msa0883640 | 0.810764 | 9.801015e-51 | -8.615850e-47 |
| Msa0199860 | Msa0886370 | 0.837912 | 3.927459e-57 | -8.615850e-47 |
| Msa0199860 | Msa0896990 | 0.865716 | 4.826953e-65 | -8.615850e-47 |
| Msa0199860 | Msa0902340 | 0.807027 | 6.177599e-50 | -8.615850e-47 |
| Msa0199860 | Msa0910570 | 0.853917 | 1.740132e-61 | -8.615850e-47 |
| Msa0199860 | Msa0910590 | 0.817512 | 3.173754e-52 | -8.615850e-47 |
| Msa0199860 | Msa0910830 | 0.813911 | 2.013689e-51 | -8.615850e-47 |
| Msa0199860 | Msa0913500 | 0.815317 | 9.837512e-52 | -8.615850e-47 |
| Msa0199860 | Msa0932890 | 0.801448 | 8.962308e-49 | -8.615850e-47 |
| Msa0199860 | Msa0932930 | 0.818829 | 1.598003e-52 | -8.615850e-47 |
| Msa0199860 | Msa0933580 | 0.818968 | 1.485669e-52 | -8.615850e-47 |
| Msa0199860 | Msa0948430 | 0.819777 | 9.720825e-53 | -8.615850e-47 |
| Msa0199860 | Msa0948460 | 0.835712 | 1.430459e-56 | -8.615850e-47 |
| Msa0199860 | Msa0951060 | 0.838250 | 3.216003e-57 | -8.615850e-47 |
| Msa0199860 | Msa0960090 | 0.811724 | 6.068101e-51 | -8.615850e-47 |
| Msa0199860 | Msa0962260 | 0.809874 | 1.525343e-50 | -8.615850e-47 |
| Msa0199860 | Msa0967820 | 0.801226 | 9.948878e-49 | -8.615850e-47 |
| Msa0199860 | Msa0976400 | 0.801513 | 8.688838e-49 | -8.615850e-47 |
| Msa0199860 | Msa0985250 | 0.848753 | 5.013633e-60 | -8.615850e-47 |
| Msa0199860 | Msa0985260 | 0.838820 | 2.290633e-57 | -8.615850e-47 |
| Msa0199860 | Msa0985290 | 0.840357 | 9.131140e-58 | -8.615850e-47 |
| Msa0199860 | Msa0985700 | 0.810088 | 1.371718e-50 | -8.615850e-47 |
| Msa0199860 | Msa0987550 | 0.801150 | 1.031269e-48 | -8.615850e-47 |
| Msa0199860 | Msa0996940 | 0.848337 | 6.536789e-60 | -8.615850e-47 |
| Msa0199860 | Msa1003240 | 0.807102 | 5.954437e-50 | -8.615850e-47 |
| Msa0199860 | Msa1006170 | 0.813876 | 2.049656e-51 | -8.615850e-47 |
| Msa0199860 | Msa1011310 | 0.821861 | 3.224090e-53 | -8.615850e-47 |
| Msa0199860 | Msa1023430 | 0.824835 | 6.509500e-54 | -8.615850e-47 |
| Msa0199860 | Msa1024350 | 0.831541 | 1.574660e-55 | -8.615850e-47 |
| Msa0199860 | Msa1026050 | 0.803164 | 3.973145e-49 | -8.615850e-47 |
| Msa0199860 | Msa1026170 | 0.815900 | 7.293223e-52 | -8.615850e-47 |
| Msa0199860 | Msa1046220 | 0.818951 | 1.499324e-52 | -8.615850e-47 |
| Msa0199860 | Msa1061840 | 0.826049 | 3.356444e-54 | -8.615850e-47 |
| Msa0199860 | Msa1083100 | 0.814286 | 1.664277e-51 | -8.615850e-47 |
| Msa0199860 | Msa1087380 | 0.805029 | 1.625633e-49 | -8.615850e-47 |
| Msa0199860 | Msa1107510 | 0.820891 | 5.396066e-53 | -8.615850e-47 |
| Msa0199860 | Msa1109880 | 0.814877 | 1.231365e-51 | -8.615850e-47 |
| Msa0199860 | Msa1109890 | 0.846517 | 2.066162e-59 | -8.615850e-47 |
| Msa0199860 | Msa1110040 | 0.834337 | 3.177916e-56 | -8.615850e-47 |
| Msa0199860 | Msa1138110 | 0.816140 | 6.447512e-52 | -8.615850e-47 |
| Msa0199860 | Msa1151070 | 0.832325 | 1.008253e-55 | -8.615850e-47 |
| Msa0199860 | Msa1173290 | 0.828883 | 7.017962e-55 | -8.615850e-47 |
| Msa0199860 | Msa1207480 | 0.806793 | 6.922877e-50 | -8.615850e-47 |
| Msa0199860 | Msa1208830 | 0.819158 | 1.345098e-52 | -8.615850e-47 |
| Msa0199860 | Msa1208910 | 0.832336 | 1.001700e-55 | -8.615850e-47 |
| Msa0199860 | Msa1221170 | 0.809351 | 1.975396e-50 | -8.615850e-47 |
| Msa0199860 | Msa1221570 | 0.800189 | 1.619704e-48 | -8.615850e-47 |
| Msa0199860 | Msa1222030 | 0.809101 | 2.234960e-50 | -8.615850e-47 |
| Msa0199860 | Msa1262320 | 0.801320 | 9.519679e-49 | -8.615850e-47 |
| Msa0199860 | Msa1262810 | 0.825673 | 4.123816e-54 | -8.615850e-47 |
| Msa0199860 | Msa1265500 | 0.812447 | 4.219863e-51 | -8.615850e-47 |
| Msa0199860 | Msa1296870 | 0.823400 | 1.413923e-53 | -8.615850e-47 |
| Msa0199860 | Msa1323030 | 0.831037 | 2.094446e-55 | -8.615850e-47 |
| Msa0199860 | Msa1323150 | 0.826278 | 2.961580e-54 | -8.615850e-47 |
| Msa0199860 | Msa1323160 | 0.843271 | 1.552800e-58 | -8.615850e-47 |
| Msa0199860 | Msa1395690 | 0.848394 | 6.301647e-60 | -8.615850e-47 |
| Msa0199860 | Msa1398110 | 0.874186 | 8.221855e-68 | -8.615850e-47 |
| Msa0199860 | Msa1399430 | -0.804718 | 1.888403e-49 | -8.615850e-47 |
| Msa0199860 | Msa1411550 | 0.801017 | 1.097892e-48 | -8.615850e-47 |
| Msa0199860 | Msa1412360 | 0.807971 | 3.894364e-50 | -8.615850e-47 |
| Msa0199860 | Msa1418190 | 0.835251 | 1.870623e-56 | -8.615850e-47 |
| Msa0199860 | Msa1419210 | 0.812575 | 3.956783e-51 | -8.615850e-47 |
| Msa0199860 | Msa1436540 | 0.800648 | 1.306163e-48 | -8.615850e-47 |
| Msa0199860 | Msa1445900 | 0.803288 | 3.744039e-49 | -8.615850e-47 |
| Msa0199860 | Msa1448150 | 0.831686 | 1.450271e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0199860 | MtrunA17_Chr2g0294601 | 86.322 | 329 | 5 | 1 | 1 | 289 | 66 | 394 | 0.0 | 567 |
| Msa0199860 | MtrunA17_Chr2g0294591 | 68.389 | 329 | 61 | 2 | 1 | 289 | 37 | 362 | 1.97e-157 | 443 |
| Msa0199860 | MtrunA17_Chr4g0039071 | 48.534 | 307 | 114 | 4 | 1 | 265 | 32 | 336 | 1.01e-91 | 276 |
| Msa0199860 | MtrunA17_Chr4g0038981 | 48.845 | 303 | 114 | 4 | 1 | 266 | 30 | 328 | 2.19e-90 | 271 |
| Msa0199860 | MtrunA17_Chr4g0039011 | 48.039 | 306 | 117 | 5 | 1 | 268 | 49 | 350 | 5.66e-87 | 264 |
| Msa0199860 | MtrunA17_Chr4g0038971 | 48.185 | 303 | 116 | 4 | 1 | 266 | 30 | 328 | 3.80e-86 | 261 |
| Msa0199860 | MtrunA17_Chr4g0038961 | 47.525 | 303 | 118 | 4 | 1 | 266 | 30 | 328 | 5.21e-85 | 258 |
| Msa0199860 | MtrunA17_Chr4g0038941 | 48.185 | 303 | 114 | 6 | 2 | 266 | 60 | 357 | 1.73e-84 | 257 |
| Msa0199860 | MtrunA17_Chr1g0174261 | 45.745 | 282 | 109 | 4 | 23 | 262 | 1 | 280 | 2.55e-77 | 239 |
| Msa0199860 | MtrunA17_Chr4g0039021 | 43.197 | 294 | 124 | 6 | 14 | 266 | 1 | 292 | 1.18e-74 | 230 |
| Msa0199860 | MtrunA17_Chr2g0294581 | 48.496 | 266 | 71 | 5 | 2 | 266 | 84 | 284 | 1.03e-71 | 222 |
| Msa0199860 | MtrunA17_Chr7g0250301 | 37.582 | 306 | 143 | 6 | 2 | 264 | 16 | 316 | 1.02e-57 | 187 |
| Msa0199860 | MtrunA17_Chr5g0439251 | 36.977 | 311 | 145 | 9 | 1 | 262 | 32 | 340 | 1.62e-55 | 186 |
| Msa0199860 | MtrunA17_Chr8g0389741 | 33.861 | 316 | 159 | 8 | 2 | 269 | 36 | 349 | 1.07e-52 | 179 |
| Msa0199860 | MtrunA17_Chr6g0487261 | 33.131 | 329 | 169 | 9 | 2 | 282 | 35 | 360 | 4.17e-52 | 177 |
| Msa0199860 | MtrunA17_Chr4g0003281 | 33.333 | 318 | 163 | 6 | 1 | 270 | 47 | 363 | 3.26e-50 | 170 |
| Msa0199860 | MtrunA17_Chr1g0177171 | 34.185 | 313 | 151 | 10 | 1 | 262 | 45 | 353 | 5.02e-50 | 172 |
| Msa0199860 | MtrunA17_Chr4g0064021 | 30.746 | 335 | 175 | 8 | 1 | 286 | 33 | 359 | 7.90e-50 | 169 |
| Msa0199860 | MtrunA17_Chr3g0119541 | 34.161 | 322 | 159 | 8 | 1 | 271 | 33 | 352 | 7.90e-49 | 166 |
| Msa0199860 | MtrunA17_Chr1g0161011 | 34.810 | 316 | 153 | 8 | 4 | 268 | 34 | 347 | 2.66e-47 | 165 |
| Msa0199860 | MtrunA17_Chr2g0321511 | 32.641 | 337 | 165 | 12 | 1 | 281 | 36 | 366 | 5.58e-47 | 161 |
| Msa0199860 | MtrunA17_Chr1g0146831 | 34.030 | 335 | 173 | 10 | 1 | 289 | 38 | 370 | 4.31e-46 | 159 |
| Msa0199860 | MtrunA17_Chr4g0043851 | 33.861 | 316 | 159 | 9 | 1 | 268 | 39 | 352 | 8.17e-46 | 159 |
| Msa0199860 | MtrunA17_Chr4g0034901 | 32.803 | 314 | 162 | 6 | 1 | 266 | 36 | 348 | 1.08e-45 | 160 |
| Msa0199860 | MtrunA17_Chr1g0155001 | 31.975 | 319 | 167 | 6 | 1 | 270 | 31 | 348 | 1.91e-45 | 158 |
| Msa0199860 | MtrunA17_Chr1g0189111 | 32.268 | 313 | 163 | 9 | 1 | 266 | 38 | 348 | 3.22e-45 | 157 |
| Msa0199860 | MtrunA17_Chr4g0069801 | 31.731 | 312 | 166 | 5 | 7 | 271 | 41 | 352 | 2.91e-44 | 157 |
| Msa0199860 | MtrunA17_Chr7g0223961 | 33.762 | 311 | 158 | 10 | 1 | 266 | 30 | 337 | 3.48e-44 | 155 |
| Msa0199860 | MtrunA17_Chr3g0144531 | 31.529 | 314 | 166 | 6 | 2 | 267 | 36 | 348 | 4.27e-44 | 155 |
| Msa0199860 | MtrunA17_Chr4g0075031 | 30.696 | 316 | 166 | 6 | 4 | 268 | 55 | 368 | 4.87e-44 | 156 |
| Msa0199860 | MtrunA17_Chr4g0026321 | 31.962 | 316 | 165 | 10 | 1 | 268 | 36 | 349 | 6.57e-44 | 153 |
| Msa0199860 | MtrunA17_Chr5g0434591 | 32.047 | 337 | 175 | 9 | 3 | 288 | 32 | 365 | 8.58e-44 | 155 |
| Msa0199860 | MtrunA17_Chr3g0110371 | 32.110 | 327 | 167 | 9 | 3 | 278 | 33 | 355 | 1.22e-42 | 152 |
| Msa0199860 | MtrunA17_Chr8g0339191 | 29.503 | 322 | 171 | 10 | 1 | 269 | 36 | 354 | 6.37e-42 | 150 |
| Msa0199860 | MtrunA17_Chr7g0234821 | 28.571 | 322 | 174 | 9 | 1 | 269 | 33 | 351 | 2.99e-40 | 145 |
| Msa0199860 | MtrunA17_Chr3g0121271 | 29.841 | 315 | 167 | 8 | 4 | 266 | 36 | 348 | 4.37e-40 | 145 |
| Msa0199860 | MtrunA17_Chr7g0250321 | 35.156 | 256 | 121 | 4 | 2 | 217 | 36 | 286 | 6.92e-40 | 140 |
| Msa0199860 | MtrunA17_Chr3g0138741 | 30.892 | 314 | 165 | 9 | 11 | 274 | 48 | 359 | 4.86e-38 | 140 |
| Msa0199860 | MtrunA17_Chr7g0253091 | 29.721 | 323 | 174 | 8 | 5 | 277 | 38 | 357 | 6.23e-38 | 139 |
| Msa0199860 | MtrunA17_Chr2g0290821 | 30.719 | 306 | 163 | 7 | 11 | 267 | 45 | 350 | 9.07e-38 | 139 |
| Msa0199860 | MtrunA17_Chr8g0378621 | 29.003 | 331 | 180 | 8 | 3 | 282 | 35 | 361 | 1.35e-37 | 139 |
| Msa0199860 | MtrunA17_Chr4g0046311 | 28.615 | 325 | 174 | 11 | 1 | 270 | 30 | 351 | 2.32e-37 | 137 |
| Msa0199860 | MtrunA17_Chr2g0285901 | 31.629 | 313 | 163 | 9 | 1 | 265 | 31 | 340 | 3.68e-37 | 135 |
| Msa0199860 | MtrunA17_Chr1g0148391 | 29.968 | 317 | 174 | 6 | 5 | 274 | 38 | 353 | 4.39e-37 | 137 |
| Msa0199860 | MtrunA17_Chr8g0383311 | 27.922 | 308 | 175 | 5 | 9 | 269 | 58 | 365 | 5.15e-37 | 137 |
| Msa0199860 | MtrunA17_Chr4g0076581 | 28.990 | 307 | 169 | 6 | 9 | 267 | 48 | 353 | 1.06e-35 | 134 |
| Msa0199860 | MtrunA17_Chr4g0062771 | 29.052 | 327 | 179 | 9 | 3 | 277 | 41 | 366 | 6.12e-35 | 131 |
| Msa0199860 | MtrunA17_Chr6g0461601 | 29.085 | 306 | 165 | 6 | 9 | 263 | 41 | 345 | 6.18e-35 | 131 |
| Msa0199860 | MtrunA17_Chr3g0129341 | 28.571 | 308 | 171 | 7 | 9 | 269 | 49 | 354 | 8.70e-34 | 128 |
| Msa0199860 | MtrunA17_Chr4g0043511 | 30.435 | 322 | 171 | 10 | 1 | 273 | 69 | 386 | 1.13e-33 | 129 |
| Msa0199860 | MtrunA17_Chr3g0105981 | 28.065 | 310 | 173 | 9 | 5 | 267 | 39 | 345 | 5.90e-31 | 120 |
| Msa0199860 | MtrunA17_Chr4g0018861 | 43.791 | 153 | 70 | 7 | 124 | 262 | 21 | 171 | 7.31e-28 | 107 |
| Msa0199860 | MtrunA17_Chr4g0018861 | 66.071 | 56 | 19 | 0 | 1 | 56 | 29 | 84 | 4.32e-19 | 83.6 |
| Msa0199860 | MtrunA17_Chr4g0018771 | 43.709 | 151 | 71 | 6 | 124 | 262 | 25 | 173 | 2.48e-27 | 105 |
| Msa0199860 | MtrunA17_Chr4g0018771 | 66.071 | 56 | 19 | 0 | 1 | 56 | 33 | 88 | 3.66e-19 | 84.0 |
| Msa0199860 | MtrunA17_Chr2g0306311 | 24.340 | 341 | 182 | 7 | 3 | 268 | 40 | 379 | 6.06e-26 | 106 |
| Msa0199860 | MtrunA17_Chr5g0436361 | 27.986 | 293 | 154 | 11 | 20 | 262 | 63 | 348 | 3.88e-24 | 100 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0199860 | AT4G16260.2 | 54.403 | 318 | 97 | 5 | 1 | 275 | 2 | 314 | 5.60e-113 | 329 |
| Msa0199860 | AT4G16260.1 | 54.403 | 318 | 97 | 5 | 1 | 275 | 31 | 343 | 9.11e-113 | 329 |
| Msa0199860 | AT3G57240.1 | 48.534 | 307 | 107 | 7 | 2 | 266 | 43 | 340 | 1.75e-82 | 252 |
| Msa0199860 | AT3G57270.1 | 44.156 | 308 | 126 | 4 | 2 | 266 | 35 | 339 | 5.26e-80 | 246 |
| Msa0199860 | AT3G57260.1 | 43.831 | 308 | 123 | 5 | 1 | 266 | 39 | 338 | 9.64e-79 | 242 |
| Msa0199860 | AT3G57260.2 | 43.831 | 308 | 123 | 5 | 1 | 266 | 55 | 354 | 1.26e-78 | 243 |
| Msa0199860 | AT5G56590.1 | 34.675 | 323 | 155 | 9 | 2 | 272 | 34 | 352 | 3.52e-57 | 191 |
| Msa0199860 | AT2G16230.1 | 35.350 | 314 | 154 | 6 | 1 | 266 | 32 | 344 | 1.43e-52 | 179 |
| Msa0199860 | AT2G26600.1 | 31.210 | 314 | 167 | 6 | 1 | 266 | 41 | 353 | 2.76e-52 | 176 |
| Msa0199860 | AT5G20390.1 | 33.770 | 305 | 151 | 7 | 1 | 260 | 40 | 338 | 1.46e-51 | 172 |
| Msa0199860 | AT3G15800.1 | 31.832 | 333 | 175 | 8 | 1 | 283 | 50 | 380 | 4.30e-49 | 167 |
| Msa0199860 | AT2G01630.2 | 34.356 | 326 | 159 | 9 | 4 | 278 | 33 | 354 | 4.12e-48 | 165 |
| Msa0199860 | AT2G05790.1 | 33.019 | 318 | 162 | 9 | 1 | 269 | 32 | 347 | 4.89e-48 | 167 |
| Msa0199860 | AT2G01630.3 | 34.251 | 327 | 160 | 9 | 3 | 278 | 32 | 354 | 7.60e-48 | 165 |
| Msa0199860 | AT5G20340.1 | 33.115 | 305 | 153 | 7 | 1 | 260 | 50 | 348 | 1.27e-47 | 162 |
| Msa0199860 | AT2G01630.1 | 34.356 | 326 | 159 | 9 | 4 | 278 | 33 | 354 | 2.68e-47 | 165 |
| Msa0199860 | AT5G55180.1 | 31.988 | 322 | 160 | 9 | 1 | 269 | 34 | 349 | 4.18e-47 | 164 |
| Msa0199860 | AT5G42720.1 | 32.602 | 319 | 165 | 7 | 2 | 271 | 34 | 351 | 5.49e-47 | 163 |
| Msa0199860 | AT5G55180.2 | 31.988 | 322 | 160 | 9 | 1 | 269 | 34 | 349 | 5.89e-47 | 164 |
| Msa0199860 | AT4G26830.2 | 31.915 | 329 | 167 | 9 | 1 | 278 | 36 | 358 | 8.02e-47 | 163 |
| Msa0199860 | AT1G11820.1 | 31.230 | 317 | 165 | 6 | 3 | 268 | 53 | 367 | 1.07e-46 | 161 |
| Msa0199860 | AT4G26830.1 | 31.915 | 329 | 167 | 9 | 1 | 278 | 32 | 354 | 1.18e-46 | 162 |
| Msa0199860 | AT5G20330.1 | 33.770 | 305 | 151 | 7 | 1 | 260 | 41 | 339 | 2.09e-46 | 159 |
| Msa0199860 | AT1G11820.3 | 31.132 | 318 | 166 | 6 | 3 | 269 | 53 | 368 | 6.34e-46 | 161 |
| Msa0199860 | AT1G11820.2 | 31.132 | 318 | 166 | 6 | 3 | 269 | 53 | 368 | 9.91e-46 | 161 |
| Msa0199860 | AT4G34480.2 | 34.603 | 315 | 157 | 6 | 1 | 267 | 33 | 346 | 1.37e-45 | 157 |
| Msa0199860 | AT5G42100.2 | 35.220 | 318 | 149 | 10 | 1 | 265 | 34 | 347 | 5.95e-45 | 157 |
| Msa0199860 | AT4G29360.2 | 34.494 | 316 | 157 | 6 | 2 | 269 | 45 | 358 | 6.11e-45 | 160 |
| Msa0199860 | AT4G29360.1 | 34.494 | 316 | 157 | 6 | 2 | 269 | 35 | 348 | 6.46e-45 | 159 |
| Msa0199860 | AT5G42100.1 | 34.494 | 316 | 154 | 9 | 1 | 265 | 34 | 347 | 7.70e-45 | 157 |
| Msa0199860 | AT1G32860.1 | 31.861 | 317 | 164 | 7 | 1 | 267 | 36 | 350 | 1.04e-44 | 157 |
| Msa0199860 | AT4G34480.1 | 34.603 | 315 | 157 | 6 | 1 | 267 | 33 | 346 | 2.25e-44 | 157 |
| Msa0199860 | AT1G33220.1 | 32.986 | 288 | 142 | 7 | 1 | 243 | 41 | 322 | 1.78e-43 | 151 |
| Msa0199860 | AT1G66250.1 | 32.581 | 310 | 157 | 7 | 3 | 262 | 41 | 348 | 4.25e-43 | 154 |
| Msa0199860 | AT1G77790.1 | 33.657 | 309 | 150 | 10 | 2 | 262 | 38 | 339 | 5.06e-43 | 150 |
| Msa0199860 | AT5G20560.1 | 32.226 | 301 | 154 | 7 | 1 | 256 | 41 | 336 | 1.06e-42 | 149 |
| Msa0199860 | AT5G24318.4 | 33.119 | 311 | 160 | 9 | 1 | 265 | 37 | 345 | 1.61e-42 | 150 |
| Msa0199860 | AT3G61810.1 | 31.761 | 318 | 157 | 9 | 2 | 267 | 63 | 372 | 2.56e-42 | 149 |
| Msa0199860 | AT4G18340.2 | 32.063 | 315 | 164 | 8 | 1 | 267 | 41 | 353 | 5.38e-42 | 149 |
| Msa0199860 | AT5G24318.2 | 33.119 | 311 | 160 | 9 | 1 | 265 | 37 | 345 | 6.89e-42 | 150 |
| Msa0199860 | AT5G58090.1 | 30.938 | 320 | 169 | 9 | 5 | 275 | 34 | 350 | 6.97e-42 | 150 |
| Msa0199860 | AT5G24318.1 | 33.119 | 311 | 160 | 9 | 1 | 265 | 37 | 345 | 8.19e-42 | 150 |
| Msa0199860 | AT4G18340.1 | 32.063 | 315 | 164 | 8 | 1 | 267 | 41 | 353 | 9.74e-42 | 148 |
| Msa0199860 | AT1G30080.2 | 30.990 | 313 | 166 | 7 | 1 | 265 | 43 | 353 | 2.31e-41 | 147 |
| Msa0199860 | AT1G30080.1 | 31.310 | 313 | 165 | 7 | 1 | 265 | 43 | 353 | 3.72e-41 | 147 |
| Msa0199860 | AT2G27500.2 | 29.114 | 316 | 175 | 6 | 1 | 268 | 36 | 350 | 6.18e-41 | 145 |
| Msa0199860 | AT2G27500.1 | 29.114 | 316 | 175 | 6 | 1 | 268 | 36 | 350 | 9.04e-41 | 145 |
| Msa0199860 | AT3G07320.1 | 30.154 | 325 | 165 | 10 | 1 | 269 | 32 | 350 | 1.09e-40 | 147 |
| Msa0199860 | AT5G18220.1 | 29.467 | 319 | 177 | 6 | 5 | 277 | 42 | 358 | 2.83e-40 | 146 |
| Msa0199860 | AT4G31140.1 | 31.290 | 310 | 165 | 6 | 5 | 267 | 39 | 347 | 1.05e-39 | 144 |
| Msa0199860 | AT2G26600.2 | 31.154 | 260 | 130 | 6 | 55 | 266 | 1 | 259 | 1.28e-38 | 137 |
| Msa0199860 | AT2G19440.2 | 28.834 | 326 | 182 | 9 | 5 | 282 | 33 | 356 | 2.19e-38 | 141 |
| Msa0199860 | AT2G19440.1 | 28.834 | 326 | 182 | 9 | 5 | 282 | 33 | 356 | 2.19e-38 | 141 |
| Msa0199860 | AT4G17180.1 | 29.967 | 307 | 161 | 7 | 9 | 267 | 40 | 340 | 3.81e-37 | 137 |
| Msa0199860 | AT5G64790.1 | 29.677 | 310 | 167 | 8 | 9 | 269 | 43 | 350 | 9.94e-37 | 136 |
| Msa0199860 | AT3G13560.4 | 28.617 | 311 | 169 | 6 | 4 | 263 | 36 | 344 | 1.16e-36 | 137 |
| Msa0199860 | AT3G13560.1 | 28.617 | 311 | 169 | 6 | 4 | 263 | 36 | 344 | 1.16e-36 | 137 |
| Msa0199860 | AT3G13560.2 | 28.617 | 311 | 169 | 6 | 4 | 263 | 36 | 344 | 1.16e-36 | 137 |
| Msa0199860 | AT3G13560.5 | 28.617 | 311 | 169 | 6 | 4 | 263 | 36 | 344 | 1.16e-36 | 137 |
| Msa0199860 | AT3G13560.3 | 28.617 | 311 | 169 | 6 | 4 | 263 | 36 | 344 | 1.16e-36 | 137 |
| Msa0199860 | AT3G46570.1 | 34.824 | 313 | 153 | 11 | 1 | 265 | 34 | 343 | 1.19e-36 | 134 |
| Msa0199860 | AT3G04010.1 | 29.448 | 326 | 179 | 8 | 1 | 277 | 40 | 363 | 1.68e-36 | 136 |
| Msa0199860 | AT5G20870.1 | 28.750 | 320 | 173 | 7 | 5 | 270 | 42 | 360 | 5.84e-36 | 135 |
| Msa0199860 | AT1G77780.1 | 31.148 | 305 | 160 | 8 | 2 | 262 | 32 | 330 | 6.14e-36 | 132 |
| Msa0199860 | AT1G64760.1 | 28.349 | 321 | 180 | 9 | 5 | 277 | 37 | 355 | 1.45e-35 | 133 |
| Msa0199860 | AT1G64760.2 | 28.349 | 321 | 180 | 9 | 5 | 277 | 37 | 355 | 1.45e-35 | 133 |
| Msa0199860 | AT3G55430.1 | 32.911 | 316 | 161 | 12 | 4 | 273 | 38 | 348 | 2.48e-35 | 132 |
| Msa0199860 | AT3G23770.1 | 29.012 | 324 | 176 | 9 | 1 | 271 | 44 | 366 | 1.02e-34 | 131 |
| Msa0199860 | AT4G14080.1 | 27.900 | 319 | 177 | 10 | 2 | 269 | 50 | 366 | 1.40e-34 | 130 |
| Msa0199860 | AT5G58480.1 | 29.582 | 311 | 167 | 8 | 5 | 266 | 38 | 345 | 2.78e-33 | 127 |
| Msa0199860 | AT2G27500.3 | 28.205 | 273 | 147 | 6 | 44 | 268 | 1 | 272 | 1.96e-31 | 119 |
| Msa0199860 | AT3G24330.1 | 26.562 | 320 | 186 | 7 | 1 | 271 | 46 | 365 | 4.75e-31 | 121 |
| Msa0199860 | AT2G39640.1 | 29.934 | 304 | 168 | 9 | 4 | 265 | 39 | 339 | 6.17e-31 | 121 |
| Msa0199860 | AT3G55780.1 | 29.193 | 322 | 168 | 13 | 19 | 285 | 60 | 376 | 4.20e-29 | 114 |
| Msa0199860 | AT4G34480.3 | 33.761 | 234 | 106 | 6 | 82 | 267 | 3 | 235 | 1.23e-20 | 91.3 |
| Msa0199860 | AT5G24318.3 | 31.707 | 205 | 95 | 6 | 106 | 265 | 2 | 206 | 2.29e-20 | 89.7 |
Find 75 sgRNAs with CRISPR-Local
Find 192 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTATAGCTTGATATATATTT+TGG | 0.089197 | 2_1:-19270530 | None:intergenic |
| GCTATTGACATGACCCTTAT+TGG | 0.130417 | 2_1:+19270591 | Msa0199860:CDS |
| CCAGAATTGGAGAAACATTT+TGG | 0.146550 | 2_1:+19271168 | Msa0199860:CDS |
| AAAGAAATGTATTGAATTTC+TGG | 0.164011 | 2_1:+19270415 | Msa0199860:CDS |
| CCAAAATGTTTCTCCAATTC+TGG | 0.169992 | 2_1:-19271168 | None:intergenic |
| TCTCCAATTCTGGACTCTTT+TGG | 0.221583 | 2_1:-19271158 | None:intergenic |
| GTCCAGTTGGAGGTTCTTCT+TGG | 0.259905 | 2_1:+19270481 | Msa0199860:CDS |
| TTACCAACATGGCTAAAATA+AGG | 0.277500 | 2_1:-19270726 | None:intergenic |
| TATACCAAGTATCCAATAAA+AGG | 0.292777 | 2_1:-19270672 | None:intergenic |
| GTTCTTTCAGAAATGATGTT+AGG | 0.293966 | 2_1:+19270637 | Msa0199860:CDS |
| AGGCTTTGAAGGTCGGAATT+AGG | 0.299238 | 2_1:-19270357 | None:intergenic |
| TCTGTAGCCCAAGGCCTTCT+TGG | 0.311724 | 2_1:-19271105 | None:intergenic |
| TCAGGCATTGAACTCATTCT+TGG | 0.314744 | 2_1:+19270330 | Msa0199860:CDS |
| CTAAATGCATTAAGAAATTC+AGG | 0.318002 | 2_1:+19270312 | Msa0199860:CDS |
| AAGAAGTACCCATTTGGATT+TGG | 0.328985 | 2_1:+19271213 | Msa0199860:CDS |
| GCATTTAGAGCAGCTTGATT+AGG | 0.354084 | 2_1:-19270297 | None:intergenic |
| TTTCTGAAAGAACCTTTAGA+TGG | 0.356274 | 2_1:-19270627 | None:intergenic |
| AACCAATCCCAGTGTTATCT+AGG | 0.358223 | 2_1:-19270966 | None:intergenic |
| AGATCTATAACTTCGTTTGC+TGG | 0.370734 | 2_1:-19270234 | None:intergenic |
| GGATTTGGTGGGGAAAGAAA+TGG | 0.371102 | 2_1:+19271228 | Msa0199860:CDS |
| GATTTGGTGGGGAAAGAAAT+GGG | 0.380181 | 2_1:+19271229 | Msa0199860:CDS |
| AGTTGGTGGCTAGGCTTTGA+AGG | 0.409122 | 2_1:-19270368 | None:intergenic |
| AAACAAAAGAAGTACCCATT+TGG | 0.414004 | 2_1:+19271207 | Msa0199860:CDS |
| GAGGGAATGAGTTTCCAATA+AGG | 0.416360 | 2_1:-19270605 | None:intergenic |
| GAACCAAAAGAGTCCAGAAT+TGG | 0.421071 | 2_1:+19271155 | Msa0199860:CDS |
| CTCTGATAATGCACGTCAAT+GGG | 0.427457 | 2_1:+19270389 | Msa0199860:CDS |
| AAGGTACTCCAAGAAGGCCT+TGG | 0.428459 | 2_1:+19271097 | Msa0199860:CDS |
| AGTATCCAATAAAAGGATCT+AGG | 0.434145 | 2_1:-19270665 | None:intergenic |
| CTTTCCCCACCAAATCCAAA+TGG | 0.434776 | 2_1:-19271222 | None:intergenic |
| ACTCTGATAATGCACGTCAA+TGG | 0.445056 | 2_1:+19270388 | Msa0199860:CDS |
| TTCTTTCAGAAATGATGTTA+GGG | 0.448198 | 2_1:+19270638 | Msa0199860:CDS |
| ATTGGATACTTGGTATATGC+AGG | 0.452948 | 2_1:+19270678 | Msa0199860:CDS |
| TTGATTCGTCATGTTGGTAA+AGG | 0.455676 | 2_1:+19271078 | Msa0199860:CDS |
| TAGATAACACTGGGATTGGT+TGG | 0.456162 | 2_1:+19270968 | Msa0199860:CDS |
| TACCAACATGGCTAAAATAA+GGG | 0.471112 | 2_1:-19270725 | None:intergenic |
| AAGTACCCATTTGGATTTGG+TGG | 0.473093 | 2_1:+19271216 | Msa0199860:CDS |
| AAATCTTCATGATCAAATCA+AGG | 0.476242 | 2_1:+19270560 | Msa0199860:CDS |
| AGCCAAGAAGAACCTCCAAC+TGG | 0.478746 | 2_1:-19270483 | None:intergenic |
| AACTCATTCCCTCCATCTAA+AGG | 0.483297 | 2_1:+19270615 | Msa0199860:CDS |
| AGTGGTTGGCCCTCTGATGG+AGG | 0.485939 | 2_1:+19271012 | Msa0199860:CDS |
| GGGTAAACATTGACAAGTAA+AGG | 0.501897 | 2_1:-19270705 | None:intergenic |
| GAGAGTGGTTGGCCCTCTGA+TGG | 0.506895 | 2_1:+19271009 | Msa0199860:CDS |
| GTGGTTGGCCCTCTGATGGA+GGG | 0.509372 | 2_1:+19271013 | Msa0199860:CDS |
| GCCCTAGATAACACTGGGAT+TGG | 0.514217 | 2_1:+19270964 | Msa0199860:intron |
| AGGGAATGAGTTTCCAATAA+GGG | 0.515316 | 2_1:-19270604 | None:intergenic |
| TGAAAGAACCTTTAGATGGA+GGG | 0.516289 | 2_1:-19270623 | None:intergenic |
| AGGTACTCCAAGAAGGCCTT+GGG | 0.520257 | 2_1:+19271098 | Msa0199860:CDS |
| CTGAAAGAACCTTTAGATGG+AGG | 0.520278 | 2_1:-19270624 | None:intergenic |
| TTTCCCCACCAAATCCAAAT+GGG | 0.522115 | 2_1:-19271221 | None:intergenic |
| AGATAACACTGGGATTGGTT+GGG | 0.525369 | 2_1:+19270969 | Msa0199860:CDS |
| CATTATCAGAGTTGGTGGCT+AGG | 0.533624 | 2_1:-19270377 | None:intergenic |
| AGTACCCATTTGGATTTGGT+GGG | 0.536863 | 2_1:+19271217 | Msa0199860:CDS |
| ACGTGCATTATCAGAGTTGG+TGG | 0.536916 | 2_1:-19270382 | None:intergenic |
| AAAATCAAGTATATTGCAGT+TGG | 0.537070 | 2_1:+19270447 | Msa0199860:CDS |
| GATAATTTGATTCGTCATGT+TGG | 0.547650 | 2_1:+19271072 | Msa0199860:CDS |
| GGTGGCTAGGCTTTGAAGGT+CGG | 0.549115 | 2_1:-19270364 | None:intergenic |
| TTGACGTGCATTATCAGAGT+TGG | 0.556118 | 2_1:-19270385 | None:intergenic |
| AGAAATGGGGAAATTGTCAA+TGG | 0.564590 | 2_1:+19271243 | Msa0199860:CDS |
| ACCAATCCCAGTGTTATCTA+GGG | 0.567725 | 2_1:-19270965 | None:intergenic |
| GTACCCATTTGGATTTGGTG+GGG | 0.578076 | 2_1:+19271218 | Msa0199860:CDS |
| AGTAGCCGCCCCTCCATCAG+AGG | 0.578903 | 2_1:-19271022 | None:intergenic |
| ATTTGGTGGGGAAAGAAATG+GGG | 0.581919 | 2_1:+19271230 | Msa0199860:CDS |
| TGGTTGGCCCTCTGATGGAG+GGG | 0.589912 | 2_1:+19271014 | Msa0199860:CDS |
| CATGCAGCCCTAGATAACAC+TGG | 0.595342 | 2_1:+19270958 | Msa0199860:intron |
| GGTAATGAAGTGAGTCCAGT+TGG | 0.595633 | 2_1:+19270468 | Msa0199860:CDS |
| AATGAAGTGAGTCCAGTTGG+AGG | 0.598323 | 2_1:+19270471 | Msa0199860:CDS |
| TTGGTAAAGGTACTCCAAGA+AGG | 0.598349 | 2_1:+19271091 | Msa0199860:CDS |
| ATATAAGTTTCTGTAGCCCA+AGG | 0.604662 | 2_1:-19271114 | None:intergenic |
| AACGTTGTTGTATCTGAGAG+TGG | 0.614257 | 2_1:+19270994 | Msa0199860:CDS |
| TTGGCCCTCTGATGGAGGGG+CGG | 0.614879 | 2_1:+19271017 | Msa0199860:CDS |
| GTAGCCGCCCCTCCATCAGA+GGG | 0.615453 | 2_1:-19271021 | None:intergenic |
| TCTATAACTTCGTTTGCTGG+TGG | 0.622975 | 2_1:-19270231 | None:intergenic |
| TTGTTGTATCTGAGAGTGGT+TGG | 0.629103 | 2_1:+19270998 | Msa0199860:CDS |
| ATGCAGCCCTAGATAACACT+GGG | 0.632794 | 2_1:+19270959 | Msa0199860:intron |
| AATAAGGGTCATGTCAATAG+CGG | 0.686579 | 2_1:-19270589 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATAGCTTGATATATATTTT+GGG | - | chr2_1:19270532-19270551 | None:intergenic | 15.0% |
| !!! | TTATAGCTTGATATATATTT+TGG | - | chr2_1:19270533-19270552 | None:intergenic | 15.0% |
| !!! | TATAGCTTGATATATATTTT+GGG | - | chr2_1:19270532-19270551 | None:intergenic | 15.0% |
| !!! | TTATAGCTTGATATATATTT+TGG | - | chr2_1:19270533-19270552 | None:intergenic | 15.0% |
| !! | AAAGAAATGTATTGAATTTC+TGG | + | chr2_1:19270415-19270434 | Msa0199860:CDS | 20.0% |
| !! | AAAGAAATGTATTGAATTTC+TGG | + | chr2_1:19270415-19270434 | Msa0199860:CDS | 20.0% |
| ! | CTAAATGCATTAAGAAATTC+AGG | + | chr2_1:19270312-19270331 | Msa0199860:CDS | 25.0% |
| !!! | ATATACTTGATTTTGACACT+AGG | - | chr2_1:19270441-19270460 | None:intergenic | 25.0% |
| ! | AAAATCAAGTATATTGCAGT+TGG | + | chr2_1:19270447-19270466 | Msa0199860:CDS | 25.0% |
| ! | AAATCTTCATGATCAAATCA+AGG | + | chr2_1:19270560-19270579 | Msa0199860:CDS | 25.0% |
| ! | TTCTTTCAGAAATGATGTTA+GGG | + | chr2_1:19270638-19270657 | Msa0199860:CDS | 25.0% |
| ! | TATACCAAGTATCCAATAAA+AGG | - | chr2_1:19270675-19270694 | None:intergenic | 25.0% |
| ! | CTAAATGCATTAAGAAATTC+AGG | + | chr2_1:19270312-19270331 | Msa0199860:CDS | 25.0% |
| !!! | ATATACTTGATTTTGACACT+AGG | - | chr2_1:19270441-19270460 | None:intergenic | 25.0% |
| ! | AAAATCAAGTATATTGCAGT+TGG | + | chr2_1:19270447-19270466 | Msa0199860:CDS | 25.0% |
| ! | AAATCTTCATGATCAAATCA+AGG | + | chr2_1:19270560-19270579 | Msa0199860:CDS | 25.0% |
| ! | TTCTTTCAGAAATGATGTTA+GGG | + | chr2_1:19270638-19270657 | Msa0199860:CDS | 25.0% |
| ! | TATACCAAGTATCCAATAAA+AGG | - | chr2_1:19270675-19270694 | None:intergenic | 25.0% |
| !! | AGCTTGATATATATTTTGGG+TGG | - | chr2_1:19270529-19270548 | None:intergenic | 30.0% |
| ! | TTTCTGAAAGAACCTTTAGA+TGG | - | chr2_1:19270630-19270649 | None:intergenic | 30.0% |
| GTTCTTTCAGAAATGATGTT+AGG | + | chr2_1:19270637-19270656 | Msa0199860:CDS | 30.0% | |
| AGTATCCAATAAAAGGATCT+AGG | - | chr2_1:19270668-19270687 | None:intergenic | 30.0% | |
| ! | AGATCCTTTTATTGGATACT+TGG | + | chr2_1:19270668-19270687 | Msa0199860:CDS | 30.0% |
| TACCAACATGGCTAAAATAA+GGG | - | chr2_1:19270728-19270747 | None:intergenic | 30.0% | |
| TTACCAACATGGCTAAAATA+AGG | - | chr2_1:19270729-19270748 | None:intergenic | 30.0% | |
| ! | ACATAGCATCAAACAAGTTT+TGG | - | chr2_1:19270927-19270946 | None:intergenic | 30.0% |
| ! | AAACTTGTTTGATGCTATGT+TGG | + | chr2_1:19270927-19270946 | Msa0199860:intron | 30.0% |
| ! | GATAATTTGATTCGTCATGT+TGG | + | chr2_1:19271072-19271091 | Msa0199860:CDS | 30.0% |
| !! | GGGTACTTCTTTTGTTTATT+AGG | - | chr2_1:19271204-19271223 | None:intergenic | 30.0% |
| !! | AAACAAAAGAAGTACCCATT+TGG | + | chr2_1:19271207-19271226 | Msa0199860:CDS | 30.0% |
| !! | AGCTTGATATATATTTTGGG+TGG | - | chr2_1:19270529-19270548 | None:intergenic | 30.0% |
| ! | TTTCTGAAAGAACCTTTAGA+TGG | - | chr2_1:19270630-19270649 | None:intergenic | 30.0% |
| GTTCTTTCAGAAATGATGTT+AGG | + | chr2_1:19270637-19270656 | Msa0199860:CDS | 30.0% | |
| AGTATCCAATAAAAGGATCT+AGG | - | chr2_1:19270668-19270687 | None:intergenic | 30.0% | |
| ! | AGATCCTTTTATTGGATACT+TGG | + | chr2_1:19270668-19270687 | Msa0199860:CDS | 30.0% |
| TACCAACATGGCTAAAATAA+GGG | - | chr2_1:19270728-19270747 | None:intergenic | 30.0% | |
| TTACCAACATGGCTAAAATA+AGG | - | chr2_1:19270729-19270748 | None:intergenic | 30.0% | |
| ! | ACATAGCATCAAACAAGTTT+TGG | - | chr2_1:19270927-19270946 | None:intergenic | 30.0% |
| ! | AAACTTGTTTGATGCTATGT+TGG | + | chr2_1:19270927-19270946 | Msa0199860:intron | 30.0% |
| ! | GATAATTTGATTCGTCATGT+TGG | + | chr2_1:19271072-19271091 | Msa0199860:CDS | 30.0% |
| !! | GGGTACTTCTTTTGTTTATT+AGG | - | chr2_1:19271204-19271223 | None:intergenic | 30.0% |
| !! | AAACAAAAGAAGTACCCATT+TGG | + | chr2_1:19271207-19271226 | Msa0199860:CDS | 30.0% |
| AGATCTATAACTTCGTTTGC+TGG | - | chr2_1:19270237-19270256 | None:intergenic | 35.0% | |
| !! | TGATATATATTTTGGGTGGC+AGG | - | chr2_1:19270525-19270544 | None:intergenic | 35.0% |
| AATAAGGGTCATGTCAATAG+CGG | - | chr2_1:19270592-19270611 | None:intergenic | 35.0% | |
| AGGGAATGAGTTTCCAATAA+GGG | - | chr2_1:19270607-19270626 | None:intergenic | 35.0% | |
| TGAAAGAACCTTTAGATGGA+GGG | - | chr2_1:19270626-19270645 | None:intergenic | 35.0% | |
| ! | GCATACCTAGATCCTTTTAT+TGG | + | chr2_1:19270660-19270679 | Msa0199860:CDS | 35.0% |
| ATTGGATACTTGGTATATGC+AGG | + | chr2_1:19270678-19270697 | Msa0199860:CDS | 35.0% | |
| GGGTAAACATTGACAAGTAA+AGG | - | chr2_1:19270708-19270727 | None:intergenic | 35.0% | |
| !!! | TACCCTTATTTTAGCCATGT+TGG | + | chr2_1:19270723-19270742 | Msa0199860:CDS | 35.0% |
| ! | TTATGCTCTTTTCACTTCAC+CGG | + | chr2_1:19270870-19270889 | Msa0199860:intron | 35.0% |
| !! | AACAAGTTTTGGTACCCATT+TGG | - | chr2_1:19270916-19270935 | None:intergenic | 35.0% |
| GTTTGATGCTATGTTGGATT+CGG | + | chr2_1:19270933-19270952 | Msa0199860:intron | 35.0% | |
| ! | TTGATTCGTCATGTTGGTAA+AGG | + | chr2_1:19271078-19271097 | Msa0199860:CDS | 35.0% |
| ATATAAGTTTCTGTAGCCCA+AGG | - | chr2_1:19271117-19271136 | None:intergenic | 35.0% | |
| CCAAAATGTTTCTCCAATTC+TGG | - | chr2_1:19271171-19271190 | None:intergenic | 35.0% | |
| ! | CCAGAATTGGAGAAACATTT+TGG | + | chr2_1:19271168-19271187 | Msa0199860:CDS | 35.0% |
| !! | AAGAAGTACCCATTTGGATT+TGG | + | chr2_1:19271213-19271232 | Msa0199860:CDS | 35.0% |
| AGAAATGGGGAAATTGTCAA+TGG | + | chr2_1:19271243-19271262 | Msa0199860:CDS | 35.0% | |
| AGATCTATAACTTCGTTTGC+TGG | - | chr2_1:19270237-19270256 | None:intergenic | 35.0% | |
| !! | TGATATATATTTTGGGTGGC+AGG | - | chr2_1:19270525-19270544 | None:intergenic | 35.0% |
| AATAAGGGTCATGTCAATAG+CGG | - | chr2_1:19270592-19270611 | None:intergenic | 35.0% | |
| AGGGAATGAGTTTCCAATAA+GGG | - | chr2_1:19270607-19270626 | None:intergenic | 35.0% | |
| TGAAAGAACCTTTAGATGGA+GGG | - | chr2_1:19270626-19270645 | None:intergenic | 35.0% | |
| ! | GCATACCTAGATCCTTTTAT+TGG | + | chr2_1:19270660-19270679 | Msa0199860:CDS | 35.0% |
| ATTGGATACTTGGTATATGC+AGG | + | chr2_1:19270678-19270697 | Msa0199860:CDS | 35.0% | |
| GGGTAAACATTGACAAGTAA+AGG | - | chr2_1:19270708-19270727 | None:intergenic | 35.0% | |
| !!! | TACCCTTATTTTAGCCATGT+TGG | + | chr2_1:19270723-19270742 | Msa0199860:CDS | 35.0% |
| ! | TTATGCTCTTTTCACTTCAC+CGG | + | chr2_1:19270870-19270889 | Msa0199860:intron | 35.0% |
| !! | AACAAGTTTTGGTACCCATT+TGG | - | chr2_1:19270916-19270935 | None:intergenic | 35.0% |
| GTTTGATGCTATGTTGGATT+CGG | + | chr2_1:19270933-19270952 | Msa0199860:intron | 35.0% | |
| ! | TTGATTCGTCATGTTGGTAA+AGG | + | chr2_1:19271078-19271097 | Msa0199860:CDS | 35.0% |
| ATATAAGTTTCTGTAGCCCA+AGG | - | chr2_1:19271117-19271136 | None:intergenic | 35.0% | |
| CCAAAATGTTTCTCCAATTC+TGG | - | chr2_1:19271171-19271190 | None:intergenic | 35.0% | |
| ! | CCAGAATTGGAGAAACATTT+TGG | + | chr2_1:19271168-19271187 | Msa0199860:CDS | 35.0% |
| !! | AAGAAGTACCCATTTGGATT+TGG | + | chr2_1:19271213-19271232 | Msa0199860:CDS | 35.0% |
| AGAAATGGGGAAATTGTCAA+TGG | + | chr2_1:19271243-19271262 | Msa0199860:CDS | 35.0% | |
| ! | TCTATAACTTCGTTTGCTGG+TGG | - | chr2_1:19270234-19270253 | None:intergenic | 40.0% |
| ! | GCATTTAGAGCAGCTTGATT+AGG | - | chr2_1:19270300-19270319 | None:intergenic | 40.0% |
| !! | TCAGGCATTGAACTCATTCT+TGG | + | chr2_1:19270330-19270349 | Msa0199860:CDS | 40.0% |
| TTGACGTGCATTATCAGAGT+TGG | - | chr2_1:19270388-19270407 | None:intergenic | 40.0% | |
| ! | ACTCTGATAATGCACGTCAA+TGG | + | chr2_1:19270388-19270407 | Msa0199860:CDS | 40.0% |
| ! | CTCTGATAATGCACGTCAAT+GGG | + | chr2_1:19270389-19270408 | Msa0199860:CDS | 40.0% |
| GCTATTGACATGACCCTTAT+TGG | + | chr2_1:19270591-19270610 | Msa0199860:CDS | 40.0% | |
| GAGGGAATGAGTTTCCAATA+AGG | - | chr2_1:19270608-19270627 | None:intergenic | 40.0% | |
| AACTCATTCCCTCCATCTAA+AGG | + | chr2_1:19270615-19270634 | Msa0199860:CDS | 40.0% | |
| CTGAAAGAACCTTTAGATGG+AGG | - | chr2_1:19270627-19270646 | None:intergenic | 40.0% | |
| ! | GGTGAAGTGAAAAGAGCATA+AGG | - | chr2_1:19270871-19270890 | None:intergenic | 40.0% |
| ! | TATGCTCTTTTCACTTCACC+GGG | + | chr2_1:19270871-19270890 | Msa0199860:intron | 40.0% |
| ACCAATCCCAGTGTTATCTA+GGG | - | chr2_1:19270968-19270987 | None:intergenic | 40.0% | |
| AACCAATCCCAGTGTTATCT+AGG | - | chr2_1:19270969-19270988 | None:intergenic | 40.0% | |
| ! | TAGATAACACTGGGATTGGT+TGG | + | chr2_1:19270968-19270987 | Msa0199860:CDS | 40.0% |
| !! | AGATAACACTGGGATTGGTT+GGG | + | chr2_1:19270969-19270988 | Msa0199860:CDS | 40.0% |
| AACGTTGTTGTATCTGAGAG+TGG | + | chr2_1:19270994-19271013 | Msa0199860:CDS | 40.0% | |
| TTGTTGTATCTGAGAGTGGT+TGG | + | chr2_1:19270998-19271017 | Msa0199860:CDS | 40.0% | |
| !! | TTGGTAAAGGTACTCCAAGA+AGG | + | chr2_1:19271091-19271110 | Msa0199860:CDS | 40.0% |
| GAACCAAAAGAGTCCAGAAT+TGG | + | chr2_1:19271155-19271174 | Msa0199860:CDS | 40.0% | |
| ! | TCTCCAATTCTGGACTCTTT+TGG | - | chr2_1:19271161-19271180 | None:intergenic | 40.0% |
| AAGTACCCATTTGGATTTGG+TGG | + | chr2_1:19271216-19271235 | Msa0199860:CDS | 40.0% | |
| ! | AGTACCCATTTGGATTTGGT+GGG | + | chr2_1:19271217-19271236 | Msa0199860:CDS | 40.0% |
| TTTCCCCACCAAATCCAAAT+GGG | - | chr2_1:19271224-19271243 | None:intergenic | 40.0% | |
| !! | GATTTGGTGGGGAAAGAAAT+GGG | + | chr2_1:19271229-19271248 | Msa0199860:CDS | 40.0% |
| ! | ATTTGGTGGGGAAAGAAATG+GGG | + | chr2_1:19271230-19271249 | Msa0199860:CDS | 40.0% |
| ! | TCTATAACTTCGTTTGCTGG+TGG | - | chr2_1:19270234-19270253 | None:intergenic | 40.0% |
| ! | GCATTTAGAGCAGCTTGATT+AGG | - | chr2_1:19270300-19270319 | None:intergenic | 40.0% |
| !! | TCAGGCATTGAACTCATTCT+TGG | + | chr2_1:19270330-19270349 | Msa0199860:CDS | 40.0% |
| TTGACGTGCATTATCAGAGT+TGG | - | chr2_1:19270388-19270407 | None:intergenic | 40.0% | |
| ! | ACTCTGATAATGCACGTCAA+TGG | + | chr2_1:19270388-19270407 | Msa0199860:CDS | 40.0% |
| ! | CTCTGATAATGCACGTCAAT+GGG | + | chr2_1:19270389-19270408 | Msa0199860:CDS | 40.0% |
| GCTATTGACATGACCCTTAT+TGG | + | chr2_1:19270591-19270610 | Msa0199860:CDS | 40.0% | |
| GAGGGAATGAGTTTCCAATA+AGG | - | chr2_1:19270608-19270627 | None:intergenic | 40.0% | |
| AACTCATTCCCTCCATCTAA+AGG | + | chr2_1:19270615-19270634 | Msa0199860:CDS | 40.0% | |
| CTGAAAGAACCTTTAGATGG+AGG | - | chr2_1:19270627-19270646 | None:intergenic | 40.0% | |
| ! | GGTGAAGTGAAAAGAGCATA+AGG | - | chr2_1:19270871-19270890 | None:intergenic | 40.0% |
| ! | TATGCTCTTTTCACTTCACC+GGG | + | chr2_1:19270871-19270890 | Msa0199860:intron | 40.0% |
| ACCAATCCCAGTGTTATCTA+GGG | - | chr2_1:19270968-19270987 | None:intergenic | 40.0% | |
| AACCAATCCCAGTGTTATCT+AGG | - | chr2_1:19270969-19270988 | None:intergenic | 40.0% | |
| ! | TAGATAACACTGGGATTGGT+TGG | + | chr2_1:19270968-19270987 | Msa0199860:CDS | 40.0% |
| !! | AGATAACACTGGGATTGGTT+GGG | + | chr2_1:19270969-19270988 | Msa0199860:CDS | 40.0% |
| AACGTTGTTGTATCTGAGAG+TGG | + | chr2_1:19270994-19271013 | Msa0199860:CDS | 40.0% | |
| TTGTTGTATCTGAGAGTGGT+TGG | + | chr2_1:19270998-19271017 | Msa0199860:CDS | 40.0% | |
| !! | TTGGTAAAGGTACTCCAAGA+AGG | + | chr2_1:19271091-19271110 | Msa0199860:CDS | 40.0% |
| GAACCAAAAGAGTCCAGAAT+TGG | + | chr2_1:19271155-19271174 | Msa0199860:CDS | 40.0% | |
| ! | TCTCCAATTCTGGACTCTTT+TGG | - | chr2_1:19271161-19271180 | None:intergenic | 40.0% |
| AAGTACCCATTTGGATTTGG+TGG | + | chr2_1:19271216-19271235 | Msa0199860:CDS | 40.0% | |
| ! | AGTACCCATTTGGATTTGGT+GGG | + | chr2_1:19271217-19271236 | Msa0199860:CDS | 40.0% |
| TTTCCCCACCAAATCCAAAT+GGG | - | chr2_1:19271224-19271243 | None:intergenic | 40.0% | |
| !! | GATTTGGTGGGGAAAGAAAT+GGG | + | chr2_1:19271229-19271248 | Msa0199860:CDS | 40.0% |
| ! | ATTTGGTGGGGAAAGAAATG+GGG | + | chr2_1:19271230-19271249 | Msa0199860:CDS | 40.0% |
| !! | AGGCTTTGAAGGTCGGAATT+AGG | - | chr2_1:19270360-19270379 | None:intergenic | 45.0% |
| !! | CATTATCAGAGTTGGTGGCT+AGG | - | chr2_1:19270380-19270399 | None:intergenic | 45.0% |
| ACGTGCATTATCAGAGTTGG+TGG | - | chr2_1:19270385-19270404 | None:intergenic | 45.0% | |
| GGTAATGAAGTGAGTCCAGT+TGG | + | chr2_1:19270468-19270487 | Msa0199860:CDS | 45.0% | |
| AATGAAGTGAGTCCAGTTGG+AGG | + | chr2_1:19270471-19270490 | Msa0199860:CDS | 45.0% | |
| TTTCACTTCACCGGGTGTTA+TGG | + | chr2_1:19270879-19270898 | Msa0199860:intron | 45.0% | |
| ATGGTACAAGACGGTCCAAA+TGG | + | chr2_1:19270898-19270917 | Msa0199860:intron | 45.0% | |
| TGGTACAAGACGGTCCAAAT+GGG | + | chr2_1:19270899-19270918 | Msa0199860:intron | 45.0% | |
| ATGCAGCCCTAGATAACACT+GGG | + | chr2_1:19270959-19270978 | Msa0199860:intron | 45.0% | |
| !! | GTACCCATTTGGATTTGGTG+GGG | + | chr2_1:19271218-19271237 | Msa0199860:CDS | 45.0% |
| CTTTCCCCACCAAATCCAAA+TGG | - | chr2_1:19271225-19271244 | None:intergenic | 45.0% | |
| !! | GGATTTGGTGGGGAAAGAAA+TGG | + | chr2_1:19271228-19271247 | Msa0199860:CDS | 45.0% |
| !! | AGGCTTTGAAGGTCGGAATT+AGG | - | chr2_1:19270360-19270379 | None:intergenic | 45.0% |
| !! | CATTATCAGAGTTGGTGGCT+AGG | - | chr2_1:19270380-19270399 | None:intergenic | 45.0% |
| ACGTGCATTATCAGAGTTGG+TGG | - | chr2_1:19270385-19270404 | None:intergenic | 45.0% | |
| GGTAATGAAGTGAGTCCAGT+TGG | + | chr2_1:19270468-19270487 | Msa0199860:CDS | 45.0% | |
| AATGAAGTGAGTCCAGTTGG+AGG | + | chr2_1:19270471-19270490 | Msa0199860:CDS | 45.0% | |
| TTTCACTTCACCGGGTGTTA+TGG | + | chr2_1:19270879-19270898 | Msa0199860:intron | 45.0% | |
| ATGGTACAAGACGGTCCAAA+TGG | + | chr2_1:19270898-19270917 | Msa0199860:intron | 45.0% | |
| TGGTACAAGACGGTCCAAAT+GGG | + | chr2_1:19270899-19270918 | Msa0199860:intron | 45.0% | |
| ATGCAGCCCTAGATAACACT+GGG | + | chr2_1:19270959-19270978 | Msa0199860:intron | 45.0% | |
| !! | GTACCCATTTGGATTTGGTG+GGG | + | chr2_1:19271218-19271237 | Msa0199860:CDS | 45.0% |
| CTTTCCCCACCAAATCCAAA+TGG | - | chr2_1:19271225-19271244 | None:intergenic | 45.0% | |
| !! | GGATTTGGTGGGGAAAGAAA+TGG | + | chr2_1:19271228-19271247 | Msa0199860:CDS | 45.0% |
| !! | AGTTGGTGGCTAGGCTTTGA+AGG | - | chr2_1:19270371-19270390 | None:intergenic | 50.0% |
| GTCCAGTTGGAGGTTCTTCT+TGG | + | chr2_1:19270481-19270500 | Msa0199860:CDS | 50.0% | |
| AGCCAAGAAGAACCTCCAAC+TGG | - | chr2_1:19270486-19270505 | None:intergenic | 50.0% | |
| CCGTCTTGTACCATAACACC+CGG | - | chr2_1:19270892-19270911 | None:intergenic | 50.0% | |
| ! | CCGGGTGTTATGGTACAAGA+CGG | + | chr2_1:19270889-19270908 | Msa0199860:intron | 50.0% |
| CATGCAGCCCTAGATAACAC+TGG | + | chr2_1:19270958-19270977 | Msa0199860:intron | 50.0% | |
| GCCCTAGATAACACTGGGAT+TGG | + | chr2_1:19270964-19270983 | Msa0199860:intron | 50.0% | |
| ! | AAGGTACTCCAAGAAGGCCT+TGG | + | chr2_1:19271097-19271116 | Msa0199860:CDS | 50.0% |
| AGGTACTCCAAGAAGGCCTT+GGG | + | chr2_1:19271098-19271117 | Msa0199860:CDS | 50.0% | |
| !! | AGTTGGTGGCTAGGCTTTGA+AGG | - | chr2_1:19270371-19270390 | None:intergenic | 50.0% |
| GTCCAGTTGGAGGTTCTTCT+TGG | + | chr2_1:19270481-19270500 | Msa0199860:CDS | 50.0% | |
| AGCCAAGAAGAACCTCCAAC+TGG | - | chr2_1:19270486-19270505 | None:intergenic | 50.0% | |
| CCGTCTTGTACCATAACACC+CGG | - | chr2_1:19270892-19270911 | None:intergenic | 50.0% | |
| ! | CCGGGTGTTATGGTACAAGA+CGG | + | chr2_1:19270889-19270908 | Msa0199860:intron | 50.0% |
| CATGCAGCCCTAGATAACAC+TGG | + | chr2_1:19270958-19270977 | Msa0199860:intron | 50.0% | |
| GCCCTAGATAACACTGGGAT+TGG | + | chr2_1:19270964-19270983 | Msa0199860:intron | 50.0% | |
| ! | AAGGTACTCCAAGAAGGCCT+TGG | + | chr2_1:19271097-19271116 | Msa0199860:CDS | 50.0% |
| AGGTACTCCAAGAAGGCCTT+GGG | + | chr2_1:19271098-19271117 | Msa0199860:CDS | 50.0% | |
| !! | GGTGGCTAGGCTTTGAAGGT+CGG | - | chr2_1:19270367-19270386 | None:intergenic | 55.0% |
| ! | NNNCGCGCGGGTTACCAACA+TGG | - | chr2_1:19270740-19270759 | None:intergenic | 55.0% |
| TCTGTAGCCCAAGGCCTTCT+TGG | - | chr2_1:19271108-19271127 | None:intergenic | 55.0% | |
| !! | GGTGGCTAGGCTTTGAAGGT+CGG | - | chr2_1:19270367-19270386 | None:intergenic | 55.0% |
| ! | NNNCGCGCGGGTTACCAACA+TGG | - | chr2_1:19270740-19270759 | None:intergenic | 55.0% |
| TCTGTAGCCCAAGGCCTTCT+TGG | - | chr2_1:19271108-19271127 | None:intergenic | 55.0% | |
| ! | GAGAGTGGTTGGCCCTCTGA+TGG | + | chr2_1:19271009-19271028 | Msa0199860:CDS | 60.0% |
| ! | AGTGGTTGGCCCTCTGATGG+AGG | + | chr2_1:19271012-19271031 | Msa0199860:CDS | 60.0% |
| ! | GTGGTTGGCCCTCTGATGGA+GGG | + | chr2_1:19271013-19271032 | Msa0199860:CDS | 60.0% |
| ! | TGGTTGGCCCTCTGATGGAG+GGG | + | chr2_1:19271014-19271033 | Msa0199860:CDS | 60.0% |
| ! | GAGAGTGGTTGGCCCTCTGA+TGG | + | chr2_1:19271009-19271028 | Msa0199860:CDS | 60.0% |
| ! | AGTGGTTGGCCCTCTGATGG+AGG | + | chr2_1:19271012-19271031 | Msa0199860:CDS | 60.0% |
| ! | GTGGTTGGCCCTCTGATGGA+GGG | + | chr2_1:19271013-19271032 | Msa0199860:CDS | 60.0% |
| ! | TGGTTGGCCCTCTGATGGAG+GGG | + | chr2_1:19271014-19271033 | Msa0199860:CDS | 60.0% |
| TTGGCCCTCTGATGGAGGGG+CGG | + | chr2_1:19271017-19271036 | Msa0199860:CDS | 65.0% | |
| GTAGCCGCCCCTCCATCAGA+GGG | - | chr2_1:19271024-19271043 | None:intergenic | 65.0% | |
| AGTAGCCGCCCCTCCATCAG+AGG | - | chr2_1:19271025-19271044 | None:intergenic | 65.0% | |
| TTGGCCCTCTGATGGAGGGG+CGG | + | chr2_1:19271017-19271036 | Msa0199860:CDS | 65.0% | |
| GTAGCCGCCCCTCCATCAGA+GGG | - | chr2_1:19271024-19271043 | None:intergenic | 65.0% | |
| AGTAGCCGCCCCTCCATCAG+AGG | - | chr2_1:19271025-19271044 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 19270216 | 19271305 | 19270216 | ID=Msa0199860;Name=Msa0199860 |
| chr2_1 | mRNA | 19270216 | 19271305 | 19270216 | ID=Msa0199860-mRNA-1;Parent=Msa0199860;Name=Msa0199860-mRNA-1;_AED=0.09;_eAED=0.10;_QI=0|0|0|1|1|1|2|0|289 |
| chr2_1 | exon | 19270216 | 19270744 | 19270216 | ID=Msa0199860-mRNA-1:exon:8015;Parent=Msa0199860-mRNA-1 |
| chr2_1 | exon | 19270965 | 19271305 | 19270965 | ID=Msa0199860-mRNA-1:exon:8016;Parent=Msa0199860-mRNA-1 |
| chr2_1 | CDS | 19270216 | 19270744 | 19270216 | ID=Msa0199860-mRNA-1:cds;Parent=Msa0199860-mRNA-1 |
| chr2_1 | CDS | 19270965 | 19271305 | 19270965 | ID=Msa0199860-mRNA-1:cds;Parent=Msa0199860-mRNA-1 |
| Gene Sequence |
| Protein sequence |
