Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0289060 | XP_013464108.1 | 97.955 | 440 | 9 | 0 | 14 | 453 | 3 | 442 | 0.0 | 907 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0289060 | sp|Q9LFW3|COBL4_ARATH | 73.183 | 399 | 103 | 2 | 33 | 431 | 18 | 412 | 0.0 | 648 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0289060 | A0A072V9S0 | 97.955 | 440 | 9 | 0 | 14 | 453 | 3 | 442 | 0.0 | 907 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0250450 | Msa0289060 | 0.871245 | 7.912914e-67 | -8.615850e-47 |
| Msa0263440 | Msa0289060 | 0.824208 | 9.141718e-54 | -8.615850e-47 |
| Msa0289060 | Msa0289100 | 0.990656 | 1.112808e-183 | -8.615850e-47 |
| Msa0289060 | Msa0301030 | 0.842313 | 2.791546e-58 | -8.615850e-47 |
| Msa0289060 | Msa0327020 | 0.893133 | 8.343055e-75 | -8.615850e-47 |
| Msa0289060 | Msa0485970 | 0.823636 | 1.245308e-53 | -8.615850e-47 |
| Msa0289060 | Msa0565260 | 0.818100 | 2.338078e-52 | -8.615850e-47 |
| Msa0289060 | Msa0580580 | 0.817500 | 3.193245e-52 | -8.615850e-47 |
| Msa0289060 | Msa0618050 | 0.813495 | 2.486504e-51 | -8.615850e-47 |
| Msa0289060 | Msa0657380 | 0.816729 | 4.760337e-52 | -8.615850e-47 |
| Msa0289060 | Msa0682920 | 0.817236 | 3.661340e-52 | -8.615850e-47 |
| Msa0289060 | Msa0708510 | 0.864430 | 1.222909e-64 | -8.615850e-47 |
| Msa0289060 | Msa1075380 | 0.826675 | 2.382170e-54 | -8.615850e-47 |
| Msa0289060 | Msa1116460 | 0.818525 | 1.873167e-52 | -8.615850e-47 |
| Msa0289060 | Msa1162860 | 0.801486 | 8.800279e-49 | -8.615850e-47 |
| Msa0289060 | Msa1199250 | 0.808471 | 3.047059e-50 | -8.615850e-47 |
| Msa0289060 | Msa1290460 | 0.803894 | 2.803034e-49 | -8.615850e-47 |
| Msa0289060 | Msa1421310 | 0.937426 | 3.531473e-98 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0289060 | MtrunA17_Chr2g0308371 | 97.955 | 440 | 9 | 0 | 14 | 453 | 3 | 442 | 0.0 | 907 |
| Msa0289060 | MtrunA17_Chr6g0455411 | 69.324 | 414 | 123 | 1 | 17 | 430 | 1 | 410 | 0.0 | 643 |
| Msa0289060 | MtrunA17_Chr7g0219931 | 65.967 | 429 | 139 | 2 | 17 | 445 | 1 | 422 | 0.0 | 634 |
| Msa0289060 | MtrunA17_Chr2g0308381 | 60.550 | 436 | 164 | 3 | 19 | 451 | 18 | 448 | 0.0 | 586 |
| Msa0289060 | MtrunA17_Chr7g0219921 | 60.138 | 434 | 162 | 4 | 25 | 452 | 17 | 445 | 0.0 | 575 |
| Msa0289060 | MtrunA17_Chr6g0455401 | 57.650 | 451 | 175 | 5 | 1 | 447 | 1 | 439 | 0.0 | 561 |
| Msa0289060 | MtrunA17_Chr6g0455391 | 58.105 | 401 | 153 | 4 | 33 | 429 | 25 | 414 | 3.62e-180 | 509 |
| Msa0289060 | MtrunA17_Chr2g0333731 | 50.714 | 420 | 196 | 4 | 34 | 446 | 27 | 442 | 2.19e-173 | 493 |
| Msa0289060 | MtrunA17_Chr3g0145441 | 40.233 | 430 | 239 | 9 | 27 | 444 | 32 | 455 | 5.88e-118 | 353 |
| Msa0289060 | MtrunA17_Chr2g0294901 | 29.087 | 471 | 273 | 22 | 30 | 453 | 197 | 653 | 1.04e-35 | 139 |
| Msa0289060 | MtrunA17_Chr4g0068011 | 28.200 | 461 | 270 | 21 | 4 | 418 | 173 | 618 | 4.22e-34 | 135 |
| Msa0289060 | MtrunA17_Chr5g0394101 | 28.029 | 421 | 246 | 18 | 43 | 418 | 26 | 434 | 3.36e-33 | 130 |
| Msa0289060 | MtrunA17_Chr2g0319581 | 27.273 | 418 | 253 | 18 | 43 | 419 | 226 | 633 | 8.80e-30 | 122 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0289060 | AT5G15630.1 | 73.183 | 399 | 103 | 2 | 33 | 431 | 18 | 412 | 0.0 | 648 |
| Msa0289060 | AT5G15630.3 | 73.158 | 380 | 98 | 2 | 52 | 431 | 1 | 376 | 0.0 | 613 |
| Msa0289060 | AT5G15630.4 | 73.151 | 365 | 94 | 2 | 67 | 431 | 3 | 363 | 0.0 | 591 |
| Msa0289060 | AT5G15630.2 | 73.151 | 365 | 94 | 2 | 67 | 431 | 3 | 363 | 0.0 | 591 |
| Msa0289060 | AT5G60920.1 | 61.305 | 429 | 154 | 4 | 20 | 438 | 15 | 441 | 0.0 | 589 |
| Msa0289060 | AT3G02210.1 | 58.391 | 435 | 170 | 4 | 19 | 450 | 22 | 448 | 0.0 | 566 |
| Msa0289060 | AT5G60920.2 | 63.384 | 396 | 139 | 3 | 47 | 438 | 1 | 394 | 0.0 | 564 |
| Msa0289060 | AT3G29810.1 | 59.569 | 418 | 157 | 4 | 34 | 446 | 27 | 437 | 0.0 | 556 |
| Msa0289060 | AT5G15630.5 | 70.031 | 327 | 94 | 2 | 33 | 359 | 18 | 340 | 0.0 | 509 |
| Msa0289060 | AT1G09790.2 | 48.551 | 414 | 202 | 6 | 17 | 427 | 7 | 412 | 3.51e-141 | 412 |
| Msa0289060 | AT1G09790.1 | 47.529 | 425 | 201 | 7 | 17 | 427 | 7 | 423 | 1.48e-138 | 405 |
| Msa0289060 | AT5G60950.1 | 49.171 | 181 | 84 | 2 | 43 | 223 | 30 | 202 | 1.10e-57 | 189 |
| Msa0289060 | AT4G16120.1 | 28.436 | 422 | 248 | 19 | 43 | 418 | 217 | 630 | 8.10e-39 | 149 |
| Msa0289060 | AT5G49270.1 | 28.205 | 429 | 255 | 19 | 36 | 418 | 210 | 631 | 1.01e-37 | 146 |
| Msa0289060 | AT4G27110.1 | 27.253 | 455 | 277 | 18 | 43 | 451 | 219 | 665 | 1.73e-33 | 134 |
| Msa0289060 | AT3G16860.1 | 28.166 | 458 | 264 | 24 | 43 | 451 | 210 | 651 | 6.16e-33 | 132 |
| Msa0289060 | AT3G20580.1 | 28.289 | 456 | 261 | 21 | 43 | 449 | 229 | 667 | 3.92e-32 | 130 |
Find 115 sgRNAs with CRISPR-Local
Find 201 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCCCATATGATTTCTTTCT+TGG | 0.151399 | 2_3:+35281723 | None:intergenic |
| TCAACTTCAGGCATGGAATT+TGG | 0.180595 | 2_3:-35282662 | Msa0289060:exon |
| CCTAGAAGGGTATACTTTAA+TGG | 0.184050 | 2_3:-35279612 | Msa0289060:CDS |
| TATTTCCAGCAACCTCTTTC+AGG | 0.198489 | 2_3:+35280434 | None:intergenic |
| AACACAACAGCTTGGGTTCT+TGG | 0.235897 | 2_3:+35280916 | None:intergenic |
| GGTAGCCTTTGAGCAGAATT+TGG | 0.247873 | 2_3:+35279546 | None:intergenic |
| ATAACAATTTGGTGATTTCT+TGG | 0.256668 | 2_3:-35282689 | None:intergenic |
| CCATTAAAGTATACCCTTCT+AGG | 0.259971 | 2_3:+35279612 | None:intergenic |
| AACTGTCTTGTTAGTCCTTC+CGG | 0.267626 | 2_3:+35281486 | None:intergenic |
| TGGCGTGTGCATTGCAATAA+AGG | 0.319433 | 2_3:+35280379 | None:intergenic |
| ATTCTACAATGATTTAATAA+TGG | 0.323384 | 2_3:-35279721 | Msa0289060:CDS |
| TTTCTTGGAACTTCAACTTC+AGG | 0.356954 | 2_3:-35282674 | Msa0289060:five_prime_UTR |
| GTGCATTGCAATAAAGGTTT+TGG | 0.357973 | 2_3:+35280385 | None:intergenic |
| GGGTAACATTACTGAGATTA+GGG | 0.358595 | 2_3:+35280230 | None:intergenic |
| TAATGGAAGCTGGGGCTAAA+GGG | 0.368160 | 2_3:-35279704 | Msa0289060:CDS |
| CAAGTTGTTGACTTATTACC+TGG | 0.372283 | 2_3:-35281619 | Msa0289060:CDS |
| GATGACACAGGAATGTTCTA+TGG | 0.385600 | 2_3:-35279750 | Msa0289060:CDS |
| TGTTGCTTGCGCTCCCATCA+TGG | 0.386890 | 2_3:+35281702 | None:intergenic |
| ATGGACATCAGATGGTTATA+TGG | 0.392606 | 2_3:-35282385 | Msa0289060:intron |
| GCATATAAAAGATAATTATA+AGG | 0.394706 | 2_3:-35280332 | Msa0289060:CDS |
| ATGAACCCGGGATGGACATT+AGG | 0.394711 | 2_3:-35281757 | Msa0289060:CDS |
| ATCCCGGGTTCATAATGTTT+CGG | 0.395348 | 2_3:+35281767 | None:intergenic |
| AGGTGGTGTGCTAACATCTT+GGG | 0.396771 | 2_3:-35281560 | Msa0289060:CDS |
| AAGATAATTATAAGGACTAT+TGG | 0.396838 | 2_3:-35280324 | Msa0289060:CDS |
| TGGGTAACATTACTGAGATT+AGG | 0.404033 | 2_3:+35280229 | None:intergenic |
| TTTGATCCATTGGATCCAAC+TGG | 0.408485 | 2_3:-35282438 | Msa0289060:CDS |
| GGGCCAAGAAAGAAATCATA+TGG | 0.421488 | 2_3:-35281726 | Msa0289060:CDS |
| TGAGCAGAATTTGGCAAGAA+AGG | 0.426117 | 2_3:+35279555 | None:intergenic |
| TAGAATGAATTACACACAAT+GGG | 0.426364 | 2_3:-35280269 | Msa0289060:CDS |
| ATATGCCAATGCACACGAAC+AGG | 0.426620 | 2_3:+35280349 | None:intergenic |
| ATAATGGAAGCTGGGGCTAA+AGG | 0.427586 | 2_3:-35279705 | Msa0289060:CDS |
| TCTTGGGGACAGGACCCTTC+AGG | 0.429022 | 2_3:-35281544 | Msa0289060:CDS |
| AACTTACTTATGGCTTCATA+AGG | 0.429069 | 2_3:+35280175 | None:intergenic |
| GGCAAGAAAGGGTATGAATC+AGG | 0.435645 | 2_3:+35279567 | None:intergenic |
| TGTAGAGGCATTTGATCCAT+TGG | 0.442199 | 2_3:-35282448 | Msa0289060:intron |
| AATGATTTAATAATGGAAGC+TGG | 0.446216 | 2_3:-35279714 | Msa0289060:CDS |
| TCTGTAAGAATAACAGTTGA+AGG | 0.452263 | 2_3:+35281394 | None:intergenic |
| AAGATCCTGAAAGAGGTTGC+TGG | 0.460769 | 2_3:-35280439 | Msa0289060:CDS |
| AAATTGCTTGGACCGGGAGC+AGG | 0.463331 | 2_3:-35281445 | Msa0289060:CDS |
| GAGCAGAATTTGGCAAGAAA+GGG | 0.471958 | 2_3:+35279556 | None:intergenic |
| AGAAATCATATGGGCCATGA+TGG | 0.480849 | 2_3:-35281716 | Msa0289060:CDS |
| ATGATTTAATAATGGAAGCT+GGG | 0.480905 | 2_3:-35279713 | Msa0289060:CDS |
| ATAAAGAAACACAACAGCTT+GGG | 0.481011 | 2_3:+35280909 | None:intergenic |
| GTCCATCCTAATGTCCATCC+CGG | 0.482281 | 2_3:+35281751 | None:intergenic |
| CAGATTGGTGTAGGACTCTC+CGG | 0.486499 | 2_3:-35281505 | Msa0289060:CDS |
| TTTGTCCTGTTCGTGTGCAT+TGG | 0.488987 | 2_3:-35280354 | Msa0289060:CDS |
| GGACTTCTCTTGCAACTATG+AGG | 0.491344 | 2_3:+35281643 | None:intergenic |
| TCAGGCATGGAATTTGGTAA+TGG | 0.494974 | 2_3:-35282656 | Msa0289060:exon |
| ATAAGTACATGTCACATTCC+AGG | 0.497470 | 2_3:+35280955 | None:intergenic |
| GATAAAGAAACACAACAGCT+TGG | 0.498328 | 2_3:+35280908 | None:intergenic |
| AGCAGGATATTCATGTGGTC+CGG | 0.500729 | 2_3:-35281428 | Msa0289060:CDS |
| ACATTCCCAGTTGGATCCAA+TGG | 0.502942 | 2_3:+35282432 | None:intergenic |
| CTGGGAATGTGACAATAAGA+TGG | 0.503167 | 2_3:-35282419 | Msa0289060:CDS |
| GCAATCTCGGCATTTCAGAT+TGG | 0.505484 | 2_3:-35281520 | Msa0289060:CDS |
| GGACCCTTCAGGTGCAATCT+CGG | 0.506260 | 2_3:-35281533 | Msa0289060:CDS |
| TGGAACTTCAACTTCAGGCA+TGG | 0.508911 | 2_3:-35282669 | Msa0289060:exon |
| CAAGACAGTTAAACTACCTC+AGG | 0.509450 | 2_3:-35281473 | Msa0289060:CDS |
| ATCTGAGGTGCTTATGAAGA+AGG | 0.516290 | 2_3:-35279673 | Msa0289060:CDS |
| AAGGTGGTGTGCTAACATCT+TGG | 0.517435 | 2_3:-35281561 | Msa0289060:CDS |
| GTCATCATTACAACACTTGT+AGG | 0.519462 | 2_3:+35279525 | None:intergenic |
| CATTTACACTAAAGCAAGGA+TGG | 0.523081 | 2_3:-35279641 | Msa0289060:CDS |
| ACAACAGCTTGGGTTCTTGG+AGG | 0.528958 | 2_3:+35280919 | None:intergenic |
| CTTATTGTCACATTCCCAGT+TGG | 0.532085 | 2_3:+35282423 | None:intergenic |
| TGTATTCAAAACTATAGACT+TGG | 0.537143 | 2_3:+35280209 | None:intergenic |
| GCTTGTCCAACTTGTGCTTG+TGG | 0.548007 | 2_3:-35280860 | Msa0289060:CDS |
| CTCATTCTTATATCTCCAGC+TGG | 0.550563 | 2_3:-35282572 | Msa0289060:intron |
| TCGGCATTTCAGATTGGTGT+AGG | 0.554531 | 2_3:-35281514 | Msa0289060:CDS |
| TCTTGCCAAATTCTGCTCAA+AGG | 0.554568 | 2_3:-35279551 | Msa0289060:CDS |
| GGTAATAAGTCAACAACTTG+AGG | 0.555852 | 2_3:+35281622 | None:intergenic |
| TACATTTAGAGAGCTGAAGT+TGG | 0.560296 | 2_3:-35282615 | Msa0289060:CDS |
| AAATGATGCAATAATCACAT+AGG | 0.564180 | 2_3:+35279500 | None:intergenic |
| TGCATATTGTAAGATGCTCC+AGG | 0.567353 | 2_3:+35281601 | None:intergenic |
| GAAATCATATGGGCCATGAT+GGG | 0.570678 | 2_3:-35281715 | Msa0289060:CDS |
| TGTGCTAACATCTTGGGGAC+AGG | 0.571959 | 2_3:-35281554 | Msa0289060:CDS |
| TACACAAACTGTTGCAAAGG+TGG | 0.573020 | 2_3:-35281577 | Msa0289060:CDS |
| ATGCCGAGATTGCACCTGAA+GGG | 0.577152 | 2_3:+35281530 | None:intergenic |
| TTGCTGGAAATAACAAGACT+AGG | 0.578763 | 2_3:-35280423 | Msa0289060:CDS |
| CCACATGAATATCCTGCTCC+CGG | 0.579683 | 2_3:+35281433 | None:intergenic |
| GTTGAAGGAACTCTCTTAGC+CGG | 0.580085 | 2_3:+35281409 | None:intergenic |
| GGAGCGCAAGCAACAGAACA+AGG | 0.580360 | 2_3:-35281694 | Msa0289060:CDS |
| CAATACACAAACTGTTGCAA+AGG | 0.581528 | 2_3:-35281580 | Msa0289060:CDS |
| TGATTTAATAATGGAAGCTG+GGG | 0.584574 | 2_3:-35279712 | Msa0289060:CDS |
| TGACAACCACAAGCACAAGT+TGG | 0.585659 | 2_3:+35280854 | None:intergenic |
| TGGGAATGTGACAATAAGAT+GGG | 0.590389 | 2_3:-35282418 | Msa0289060:CDS |
| ATGGCTTCATAAGGAAGAAG+TGG | 0.591100 | 2_3:+35280184 | None:intergenic |
| TCCATCCTAATGTCCATCCC+GGG | 0.595187 | 2_3:+35281752 | None:intergenic |
| AGATTCAAAGATCCTGAAAG+AGG | 0.596172 | 2_3:-35280446 | Msa0289060:CDS |
| AAGTTGGACAAGCTGTGACT+TGG | 0.597255 | 2_3:+35280870 | None:intergenic |
| AATGCCGAGATTGCACCTGA+AGG | 0.597959 | 2_3:+35281529 | None:intergenic |
| AAAGGGTATGAATCAGGAGG+TGG | 0.602047 | 2_3:+35279573 | None:intergenic |
| GGCCAAGAAAGAAATCATAT+GGG | 0.602816 | 2_3:-35281725 | Msa0289060:CDS |
| ATTATGTCATGGACATCAGA+TGG | 0.603721 | 2_3:-35282393 | Msa0289060:CDS |
| GATGGACATTAGGATGGACA+TGG | 0.605342 | 2_3:-35281747 | Msa0289060:CDS |
| GTATTCAAAACTATAGACTT+GGG | 0.605359 | 2_3:+35280210 | None:intergenic |
| AACACATTTACACTAAAGCA+AGG | 0.605862 | 2_3:-35279645 | Msa0289060:CDS |
| ATACCGAAACATTATGAACC+CGG | 0.606089 | 2_3:-35281770 | Msa0289060:CDS |
| ACCCGGGATGGACATTAGGA+TGG | 0.607366 | 2_3:-35281753 | Msa0289060:CDS |
| TACCGAAACATTATGAACCC+GGG | 0.608883 | 2_3:-35281769 | Msa0289060:CDS |
| ATTTACACTAAAGCAAGGAT+GGG | 0.609581 | 2_3:-35279640 | Msa0289060:CDS |
| TTATTCTTACAGATGATCGT+AGG | 0.609804 | 2_3:-35281384 | Msa0289060:CDS |
| TTGATCCATTGGATCCAACT+GGG | 0.610985 | 2_3:-35282437 | Msa0289060:CDS |
| GAAACATTATGAACCCGGGA+TGG | 0.613102 | 2_3:-35281765 | Msa0289060:CDS |
| TAAGATGGGATATTATGTCA+TGG | 0.615769 | 2_3:-35282404 | Msa0289060:CDS |
| GGTGGTGTGCTAACATCTTG+GGG | 0.624710 | 2_3:-35281559 | Msa0289060:CDS |
| ATAGAATGAATTACACACAA+TGG | 0.628977 | 2_3:-35280270 | Msa0289060:CDS |
| TAAAGGGAATGTGCAATCTG+AGG | 0.631122 | 2_3:-35279688 | Msa0289060:CDS |
| CCAAGCAATTTAAAATCCTG+AGG | 0.636131 | 2_3:+35281457 | None:intergenic |
| TTGGTGTAGGACTCTCCGGA+AGG | 0.662739 | 2_3:-35281501 | Msa0289060:CDS |
| AATGCACACGAACAGGACAA+AGG | 0.669891 | 2_3:+35280356 | None:intergenic |
| CCGGGAGCAGGATATTCATG+TGG | 0.685860 | 2_3:-35281433 | Msa0289060:CDS |
| GCACACGAACAGGACAAAGG+TGG | 0.685930 | 2_3:+35280359 | None:intergenic |
| AAGAAAGGGTATGAATCAGG+AGG | 0.687329 | 2_3:+35279570 | None:intergenic |
| ATGGACATTAGGATGGACAT+GGG | 0.698791 | 2_3:-35281746 | Msa0289060:CDS |
| AGAATGAATTACACACAATG+GGG | 0.725776 | 2_3:-35280268 | Msa0289060:CDS |
| ATTGTGTATGCAGATGACAC+AGG | 0.753079 | 2_3:-35279762 | Msa0289060:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTGATAATTTTATTCTTT+TGG | + | chr2_3:35279936-35279955 | None:intergenic | 10.0% |
| !! | AAATAATGTTATAACTTATA+AGG | + | chr2_3:35281652-35281671 | None:intergenic | 10.0% |
| !! | TTATAAGTTATAACATTATT+TGG | - | chr2_3:35281651-35281670 | Msa0289060:CDS | 10.0% |
| !! | GCATATAAAAGATAATTATA+AGG | - | chr2_3:35281833-35281852 | Msa0289060:intron | 15.0% |
| !! | ATTCTACAATGATTTAATAA+TGG | - | chr2_3:35282444-35282463 | Msa0289060:CDS | 15.0% |
| !! | TTGCATATATGAAAAAACAT+AGG | - | chr2_3:35279625-35279644 | Msa0289060:CDS | 20.0% |
| !!! | TTATTATGTGTTACTATATC+AGG | + | chr2_3:35280066-35280085 | None:intergenic | 20.0% |
| !! | TTAATATTCGCATAATAACA+CGG | - | chr2_3:35280107-35280126 | Msa0289060:intron | 20.0% |
| !!! | CGAAAAACATATTTTCAAAA+TGG | - | chr2_3:35280193-35280212 | Msa0289060:CDS | 20.0% |
| !! | TATTAGATAATACTATTTCC+AGG | + | chr2_3:35281072-35281091 | None:intergenic | 20.0% |
| !! | TAATAGTACATTTGTATTCA+AGG | + | chr2_3:35281150-35281169 | None:intergenic | 20.0% |
| !!! | AAGACTAATAATCATGATTT+TGG | + | chr2_3:35281542-35281561 | None:intergenic | 20.0% |
| !! | AAGATAATTATAAGGACTAT+TGG | - | chr2_3:35281841-35281860 | Msa0289060:intron | 20.0% |
| !! | ATATTTGAAGAACTTACTTA+TGG | + | chr2_3:35282003-35282022 | None:intergenic | 20.0% |
| !! | TCAAGTAAACAAAATATAGA+CGG | + | chr2_3:35282032-35282051 | None:intergenic | 20.0% |
| !!! | AAATAAATTGGCTTGAAATT+TGG | + | chr2_3:35282197-35282216 | None:intergenic | 20.0% |
| !! | ATAGGGATATTATATGTATT+TGG | + | chr2_3:35282328-35282347 | None:intergenic | 20.0% |
| !!! | TTATTGCATCATTTTTCATT+TGG | - | chr2_3:35282674-35282693 | Msa0289060:five_prime_UTR | 20.0% |
| !!! | ATCTTATTTTATGCTTGTAG+AGG | - | chr2_3:35279702-35279721 | Msa0289060:CDS | 25.0% |
| !!! | CATCATTTTTGGAAACATTT+TGG | + | chr2_3:35279890-35279909 | None:intergenic | 25.0% |
| ! | CTAGAAAAGGATTTGAATAA+TGG | - | chr2_3:35280024-35280043 | Msa0289060:intron | 25.0% |
| ! | AGTAACTGAGATTCATTTAA+AGG | + | chr2_3:35280224-35280243 | None:intergenic | 25.0% |
| !! | GATACTATGATGTCAAATTT+TGG | - | chr2_3:35280340-35280359 | Msa0289060:CDS | 25.0% |
| ! | CTATTTGCAATATACTCAAA+GGG | + | chr2_3:35280841-35280860 | None:intergenic | 25.0% |
| ! | ACTATTTGCAATATACTCAA+AGG | + | chr2_3:35280842-35280861 | None:intergenic | 25.0% |
| ! | GAGTATATTGCAAATAGTTA+TGG | - | chr2_3:35280844-35280863 | Msa0289060:CDS | 25.0% |
| ! | TAATGTGGAAGTAGAAATTA+AGG | + | chr2_3:35281366-35281385 | None:intergenic | 25.0% |
| ! | TTAAAAGTTGGCTAATAATG+TGG | + | chr2_3:35281381-35281400 | None:intergenic | 25.0% |
| ! | GTTGCATCATAATCATTTAT+AGG | - | chr2_3:35281413-35281432 | Msa0289060:CDS | 25.0% |
| ! | GAAATTCAGTCAAATACAAT+TGG | - | chr2_3:35281440-35281459 | Msa0289060:CDS | 25.0% |
| !! | AATAATCATGATTTTGGACA+CGG | + | chr2_3:35281536-35281555 | None:intergenic | 25.0% |
| !!! | GATTATTAGTCTTAACCATA+TGG | - | chr2_3:35281549-35281568 | Msa0289060:CDS | 25.0% |
| !!! | CACAATATAAAAGGTTTTAG+AGG | + | chr2_3:35281596-35281615 | None:intergenic | 25.0% |
| !!! | CTCTAAAACCTTTTATATTG+TGG | - | chr2_3:35281594-35281613 | Msa0289060:CDS | 25.0% |
| ! | ATAGAATGAATTACACACAA+TGG | - | chr2_3:35281895-35281914 | Msa0289060:intron | 25.0% |
| ! | TAGAATGAATTACACACAAT+GGG | - | chr2_3:35281896-35281915 | Msa0289060:intron | 25.0% |
| ! | GTATTCAAAACTATAGACTT+GGG | + | chr2_3:35281958-35281977 | None:intergenic | 25.0% |
| ! | TGTATTCAAAACTATAGACT+TGG | + | chr2_3:35281959-35281978 | None:intergenic | 25.0% |
| ! | TTGGATTGTACGATATTAAT+CGG | + | chr2_3:35282178-35282197 | None:intergenic | 25.0% |
| !!! | GTTTTTTTAACTTTTGTGCA+TGG | - | chr2_3:35282376-35282395 | Msa0289060:intron | 25.0% |
| !! | AATGATTTAATAATGGAAGC+TGG | - | chr2_3:35282451-35282470 | Msa0289060:intron | 25.0% |
| !! | ATGATTTAATAATGGAAGCT+GGG | - | chr2_3:35282452-35282471 | Msa0289060:intron | 25.0% |
| ! | AAATGATGCAATAATCACAT+AGG | + | chr2_3:35282668-35282687 | None:intergenic | 25.0% |
| TAAGATGGGATATTATGTCA+TGG | - | chr2_3:35279761-35279780 | Msa0289060:intron | 30.0% | |
| ! | CTGATCATGCTATTCTTTTA+AGG | - | chr2_3:35279824-35279843 | Msa0289060:intron | 30.0% |
| TCCAAAAATGATGAAATCAC+TGG | - | chr2_3:35279897-35279916 | Msa0289060:intron | 30.0% | |
| ! | ACCAGTGATTTCATCATTTT+TGG | + | chr2_3:35279901-35279920 | None:intergenic | 30.0% |
| GAAAAGGATTTGAATAATGG+TGG | - | chr2_3:35280027-35280046 | Msa0289060:intron | 30.0% | |
| TCTGTAAGAATAACAGTTGA+AGG | + | chr2_3:35280774-35280793 | None:intergenic | 30.0% | |
| TTATTCTTACAGATGATCGT+AGG | - | chr2_3:35280781-35280800 | Msa0289060:intron | 30.0% | |
| TTTAATACTGCCGAGAATTA+TGG | - | chr2_3:35280906-35280925 | Msa0289060:CDS | 30.0% | |
| CTACATTTGACCATAATTCT+CGG | + | chr2_3:35280919-35280938 | None:intergenic | 30.0% | |
| ACTGCATAGGAAAAAAATAC+AGG | + | chr2_3:35281188-35281207 | None:intergenic | 30.0% | |
| ATAAAGAAACACAACAGCTT+GGG | + | chr2_3:35281259-35281278 | None:intergenic | 30.0% | |
| ATTTGTCATTATGCAAATGC+AGG | - | chr2_3:35281694-35281713 | Msa0289060:CDS | 30.0% | |
| AGAATGAATTACACACAATG+GGG | - | chr2_3:35281897-35281916 | Msa0289060:intron | 30.0% | |
| AACTTACTTATGGCTTCATA+AGG | + | chr2_3:35281993-35282012 | None:intergenic | 30.0% | |
| AAAATACCAAGCTTGAAATC+TGG | - | chr2_3:35282230-35282249 | Msa0289060:intron | 30.0% | |
| ! | GTTGTCTTATTAAGATCAGA+CGG | + | chr2_3:35282257-35282276 | None:intergenic | 30.0% |
| ATGTGACTCTATGCATTATA+GGG | + | chr2_3:35282345-35282364 | None:intergenic | 30.0% | |
| ! | TGATTTAATAATGGAAGCTG+GGG | - | chr2_3:35282453-35282472 | Msa0289060:intron | 30.0% |
| AACACATTTACACTAAAGCA+AGG | - | chr2_3:35282520-35282539 | Msa0289060:intron | 30.0% | |
| ATTTACACTAAAGCAAGGAT+GGG | - | chr2_3:35282525-35282544 | Msa0289060:intron | 30.0% | |
| TTTCTTGGAACTTCAACTTC+AGG | - | chr2_3:35279491-35279510 | Msa0289060:CDS | 35.0% | |
| TACATTTAGAGAGCTGAAGT+TGG | - | chr2_3:35279550-35279569 | Msa0289060:CDS | 35.0% | |
| ATGCAAAGTAATTTACCAGC+TGG | + | chr2_3:35279611-35279630 | None:intergenic | 35.0% | |
| TGGGAATGTGACAATAAGAT+GGG | - | chr2_3:35279747-35279766 | Msa0289060:CDS | 35.0% | |
| ATTATGTCATGGACATCAGA+TGG | - | chr2_3:35279772-35279791 | Msa0289060:intron | 35.0% | |
| ATGGACATCAGATGGTTATA+TGG | - | chr2_3:35279780-35279799 | Msa0289060:intron | 35.0% | |
| TAGCATGATCAGACAAAGTT+TGG | + | chr2_3:35279816-35279835 | None:intergenic | 35.0% | |
| TAGATTCGAGAAGCTAGAAA+AGG | - | chr2_3:35280011-35280030 | Msa0289060:intron | 35.0% | |
| GTGTAACACACATAGATGTT+TGG | - | chr2_3:35280129-35280148 | Msa0289060:intron | 35.0% | |
| !! | ATATGTTTTTCGATACGCAC+TGG | + | chr2_3:35280185-35280204 | None:intergenic | 35.0% |
| AATGAATCTCAGTTACTTCG+AGG | - | chr2_3:35280227-35280246 | Msa0289060:CDS | 35.0% | |
| ATGAATCTCAGTTACTTCGA+GGG | - | chr2_3:35280228-35280247 | Msa0289060:CDS | 35.0% | |
| TTAATCTCCACAATTACACG+TGG | - | chr2_3:35280252-35280271 | Msa0289060:CDS | 35.0% | |
| !! | CTATGATGTCAAATTTTGGC+AGG | - | chr2_3:35280344-35280363 | Msa0289060:CDS | 35.0% |
| ATACCGAAACATTATGAACC+CGG | - | chr2_3:35280395-35280414 | Msa0289060:CDS | 35.0% | |
| GGCCAAGAAAGAAATCATAT+GGG | - | chr2_3:35280440-35280459 | Msa0289060:CDS | 35.0% | |
| GGTAATAAGTCAACAACTTG+AGG | + | chr2_3:35280546-35280565 | None:intergenic | 35.0% | |
| !! | CAAGTTGTTGACTTATTACC+TGG | - | chr2_3:35280546-35280565 | Msa0289060:intron | 35.0% |
| CAATACACAAACTGTTGCAA+AGG | - | chr2_3:35280585-35280604 | Msa0289060:intron | 35.0% | |
| ! | CCAAGCAATTTAAAATCCTG+AGG | + | chr2_3:35280711-35280730 | None:intergenic | 35.0% |
| ! | CCTCAGGATTTTAAATTGCT+TGG | - | chr2_3:35280708-35280727 | Msa0289060:intron | 35.0% |
| ! | GGATTTTAAATTGCTTGGAC+CGG | - | chr2_3:35280713-35280732 | Msa0289060:intron | 35.0% |
| ! | GATTTTAAATTGCTTGGACC+GGG | - | chr2_3:35280714-35280733 | Msa0289060:intron | 35.0% |
| AGGATCTGCAATTACAATCA+AGG | + | chr2_3:35281004-35281023 | None:intergenic | 35.0% | |
| ! | ATCCTTTTCGAAAACCTTGA+TGG | - | chr2_3:35281019-35281038 | Msa0289060:intron | 35.0% |
| ! | AACCATCAAGGTTTTCGAAA+AGG | + | chr2_3:35281024-35281043 | None:intergenic | 35.0% |
| ATAAGTACATGTCACATTCC+AGG | + | chr2_3:35281213-35281232 | None:intergenic | 35.0% | |
| GATAAAGAAACACAACAGCT+TGG | + | chr2_3:35281260-35281279 | None:intergenic | 35.0% | |
| AGATTCAAAGATCCTGAAAG+AGG | - | chr2_3:35281719-35281738 | Msa0289060:CDS | 35.0% | |
| TTGCTGGAAATAACAAGACT+AGG | - | chr2_3:35281742-35281761 | Msa0289060:CDS | 35.0% | |
| ! | GTGCATTGCAATAAAGGTTT+TGG | + | chr2_3:35281783-35281802 | None:intergenic | 35.0% |
| GGGTAACATTACTGAGATTA+GGG | + | chr2_3:35281938-35281957 | None:intergenic | 35.0% | |
| TGGGTAACATTACTGAGATT+AGG | + | chr2_3:35281939-35281958 | None:intergenic | 35.0% | |
| CGACGTCTCTAATACAAATT+CGG | - | chr2_3:35282102-35282121 | Msa0289060:intron | 35.0% | |
| CATTGCAATCAACATGTTTG+TGG | - | chr2_3:35282148-35282167 | Msa0289060:intron | 35.0% | |
| CATGTGACTCTATGCATTAT+AGG | + | chr2_3:35282346-35282365 | None:intergenic | 35.0% | |
| CATTTACACTAAAGCAAGGA+TGG | - | chr2_3:35282524-35282543 | Msa0289060:intron | 35.0% | |
| CCATTAAAGTATACCCTTCT+AGG | + | chr2_3:35282556-35282575 | None:intergenic | 35.0% | |
| ! | CCTAGAAGGGTATACTTTAA+TGG | - | chr2_3:35282553-35282572 | Msa0289060:intron | 35.0% |
| GTCATCATTACAACACTTGT+AGG | + | chr2_3:35282643-35282662 | None:intergenic | 35.0% | |
| TCAACTTCAGGCATGGAATT+TGG | - | chr2_3:35279503-35279522 | Msa0289060:CDS | 40.0% | |
| TCAGGCATGGAATTTGGTAA+TGG | - | chr2_3:35279509-35279528 | Msa0289060:CDS | 40.0% | |
| CTCATTCTTATATCTCCAGC+TGG | - | chr2_3:35279593-35279612 | Msa0289060:CDS | 40.0% | |
| !! | TGTAGAGGCATTTGATCCAT+TGG | - | chr2_3:35279717-35279736 | Msa0289060:CDS | 40.0% |
| TTTGATCCATTGGATCCAAC+TGG | - | chr2_3:35279727-35279746 | Msa0289060:CDS | 40.0% | |
| TTGATCCATTGGATCCAACT+GGG | - | chr2_3:35279728-35279747 | Msa0289060:CDS | 40.0% | |
| CTTATTGTCACATTCCCAGT+TGG | + | chr2_3:35279745-35279764 | None:intergenic | 40.0% | |
| CTGGGAATGTGACAATAAGA+TGG | - | chr2_3:35279746-35279765 | Msa0289060:CDS | 40.0% | |
| TGTTTGGATCCCTTAACCAT+AGG | - | chr2_3:35280145-35280164 | Msa0289060:intron | 40.0% | |
| ACACGAACTCCTATGGTTAA+GGG | + | chr2_3:35280157-35280176 | None:intergenic | 40.0% | |
| TGAATCTCAGTTACTTCGAG+GGG | - | chr2_3:35280229-35280248 | Msa0289060:CDS | 40.0% | |
| CTATCATCCACGTGTAATTG+TGG | + | chr2_3:35280262-35280281 | None:intergenic | 40.0% | |
| TACCGAAACATTATGAACCC+GGG | - | chr2_3:35280396-35280415 | Msa0289060:CDS | 40.0% | |
| ATCCCGGGTTCATAATGTTT+CGG | + | chr2_3:35280401-35280420 | None:intergenic | 40.0% | |
| ATGGACATTAGGATGGACAT+GGG | - | chr2_3:35280419-35280438 | Msa0289060:CDS | 40.0% | |
| GGGCCAAGAAAGAAATCATA+TGG | - | chr2_3:35280439-35280458 | Msa0289060:CDS | 40.0% | |
| GGCCCATATGATTTCTTTCT+TGG | + | chr2_3:35280445-35280464 | None:intergenic | 40.0% | |
| AGAAATCATATGGGCCATGA+TGG | - | chr2_3:35280449-35280468 | Msa0289060:CDS | 40.0% | |
| GAAATCATATGGGCCATGAT+GGG | - | chr2_3:35280450-35280469 | Msa0289060:CDS | 40.0% | |
| TGCATATTGTAAGATGCTCC+AGG | + | chr2_3:35280567-35280586 | None:intergenic | 40.0% | |
| TACACAAACTGTTGCAAAGG+TGG | - | chr2_3:35280588-35280607 | Msa0289060:intron | 40.0% | |
| ! | AACTGTCTTGTTAGTCCTTC+CGG | + | chr2_3:35280682-35280701 | None:intergenic | 40.0% |
| CAAGACAGTTAAACTACCTC+AGG | - | chr2_3:35280692-35280711 | Msa0289060:intron | 40.0% | |
| !! | AGCGTTGATTGTAACCATCA+AGG | + | chr2_3:35281036-35281055 | None:intergenic | 40.0% |
| !! | ACGCTTTAAAGAAACTGTCC+TGG | - | chr2_3:35281051-35281070 | Msa0289060:intron | 40.0% |
| !!! | TTTTTTCCTATGCAGTGTCC+TGG | - | chr2_3:35281192-35281211 | Msa0289060:intron | 40.0% |
| CTCGACAGCAGTTTAAAAGT+TGG | + | chr2_3:35281393-35281412 | None:intergenic | 40.0% | |
| ! | CAACTTTTAAACTGCTGTCG+AGG | - | chr2_3:35281391-35281410 | Msa0289060:CDS | 40.0% |
| TAACTGCTATTGCAGCCATA+TGG | + | chr2_3:35281567-35281586 | None:intergenic | 40.0% | |
| AACTGCGGCCACAATATAAA+AGG | + | chr2_3:35281605-35281624 | None:intergenic | 40.0% | |
| TATTTCCAGCAACCTCTTTC+AGG | + | chr2_3:35281734-35281753 | None:intergenic | 40.0% | |
| ATGGCTTCATAAGGAAGAAG+TGG | + | chr2_3:35281984-35282003 | None:intergenic | 40.0% | |
| TTCATACAGTGGCACATATG+CGG | + | chr2_3:35282279-35282298 | None:intergenic | 40.0% | |
| AATTGCACGCATTCATACAG+TGG | + | chr2_3:35282290-35282309 | None:intergenic | 40.0% | |
| ATTGTGTATGCAGATGACAC+AGG | - | chr2_3:35282403-35282422 | Msa0289060:CDS | 40.0% | |
| GATGACACAGGAATGTTCTA+TGG | - | chr2_3:35282415-35282434 | Msa0289060:CDS | 40.0% | |
| TAAAGGGAATGTGCAATCTG+AGG | - | chr2_3:35282477-35282496 | Msa0289060:intron | 40.0% | |
| ! | ATCTGAGGTGCTTATGAAGA+AGG | - | chr2_3:35282492-35282511 | Msa0289060:intron | 40.0% |
| ! | AAGAAAGGGTATGAATCAGG+AGG | + | chr2_3:35282598-35282617 | None:intergenic | 40.0% |
| GAGCAGAATTTGGCAAGAAA+GGG | + | chr2_3:35282612-35282631 | None:intergenic | 40.0% | |
| TGAGCAGAATTTGGCAAGAA+AGG | + | chr2_3:35282613-35282632 | None:intergenic | 40.0% | |
| TCTTGCCAAATTCTGCTCAA+AGG | - | chr2_3:35282614-35282633 | Msa0289060:CDS | 40.0% | |
| TGGAACTTCAACTTCAGGCA+TGG | - | chr2_3:35279496-35279515 | Msa0289060:CDS | 45.0% | |
| ACATTCCCAGTTGGATCCAA+TGG | + | chr2_3:35279736-35279755 | None:intergenic | 45.0% | |
| GACACGAACTCCTATGGTTA+AGG | + | chr2_3:35280158-35280177 | None:intergenic | 45.0% | |
| AACCATAGGAGTTCGTGTCA+TGG | - | chr2_3:35280159-35280178 | Msa0289060:intron | 45.0% | |
| GAAACATTATGAACCCGGGA+TGG | - | chr2_3:35280400-35280419 | Msa0289060:CDS | 45.0% | |
| GATGGACATTAGGATGGACA+TGG | - | chr2_3:35280418-35280437 | Msa0289060:CDS | 45.0% | |
| GGACTTCTCTTGCAACTATG+AGG | + | chr2_3:35280525-35280544 | None:intergenic | 45.0% | |
| AAGGTGGTGTGCTAACATCT+TGG | - | chr2_3:35280604-35280623 | Msa0289060:intron | 45.0% | |
| AGGTGGTGTGCTAACATCTT+GGG | - | chr2_3:35280605-35280624 | Msa0289060:intron | 45.0% | |
| GCAATCTCGGCATTTCAGAT+TGG | - | chr2_3:35280645-35280664 | Msa0289060:intron | 45.0% | |
| TCGGCATTTCAGATTGGTGT+AGG | - | chr2_3:35280651-35280670 | Msa0289060:intron | 45.0% | |
| AGCAGGATATTCATGTGGTC+CGG | - | chr2_3:35280737-35280756 | Msa0289060:intron | 45.0% | |
| GTTGAAGGAACTCTCTTAGC+CGG | + | chr2_3:35280759-35280778 | None:intergenic | 45.0% | |
| AACACAACAGCTTGGGTTCT+TGG | + | chr2_3:35281252-35281271 | None:intergenic | 45.0% | |
| AAGTTGGACAAGCTGTGACT+TGG | + | chr2_3:35281298-35281317 | None:intergenic | 45.0% | |
| TGACAACCACAAGCACAAGT+TGG | + | chr2_3:35281314-35281333 | None:intergenic | 45.0% | |
| AAGATCCTGAAAGAGGTTGC+TGG | - | chr2_3:35281726-35281745 | Msa0289060:CDS | 45.0% | |
| TGGCGTGTGCATTGCAATAA+AGG | + | chr2_3:35281789-35281808 | None:intergenic | 45.0% | |
| AATGCACACGAACAGGACAA+AGG | + | chr2_3:35281812-35281831 | None:intergenic | 45.0% | |
| TTTGTCCTGTTCGTGTGCAT+TGG | - | chr2_3:35281811-35281830 | Msa0289060:intron | 45.0% | |
| ATATGCCAATGCACACGAAC+AGG | + | chr2_3:35281819-35281838 | None:intergenic | 45.0% | |
| ! | ATAATGGAAGCTGGGGCTAA+AGG | - | chr2_3:35282460-35282479 | Msa0289060:intron | 45.0% |
| TAATGGAAGCTGGGGCTAAA+GGG | - | chr2_3:35282461-35282480 | Msa0289060:intron | 45.0% | |
| !! | AAGGATGGGCTTTTCCTAGA+AGG | - | chr2_3:35282539-35282558 | Msa0289060:intron | 45.0% |
| !! | AGGATGGGCTTTTCCTAGAA+GGG | - | chr2_3:35282540-35282559 | Msa0289060:intron | 45.0% |
| ! | AAAGGGTATGAATCAGGAGG+TGG | + | chr2_3:35282595-35282614 | None:intergenic | 45.0% |
| ! | GGCAAGAAAGGGTATGAATC+AGG | + | chr2_3:35282601-35282620 | None:intergenic | 45.0% |
| GGTAGCCTTTGAGCAGAATT+TGG | + | chr2_3:35282622-35282641 | None:intergenic | 45.0% | |
| !! | GATTAAAAAAATAAATAAAT+TGG | + | chr2_3:35282209-35282228 | None:intergenic | 5.0% |
| ATGAACCCGGGATGGACATT+AGG | - | chr2_3:35280408-35280427 | Msa0289060:CDS | 50.0% | |
| TCCATCCTAATGTCCATCCC+GGG | + | chr2_3:35280416-35280435 | None:intergenic | 50.0% | |
| GTCCATCCTAATGTCCATCC+CGG | + | chr2_3:35280417-35280436 | None:intergenic | 50.0% | |
| GGTGGTGTGCTAACATCTTG+GGG | - | chr2_3:35280606-35280625 | Msa0289060:intron | 50.0% | |
| TGTGCTAACATCTTGGGGAC+AGG | - | chr2_3:35280611-35280630 | Msa0289060:intron | 50.0% | |
| ATGCCGAGATTGCACCTGAA+GGG | + | chr2_3:35280638-35280657 | None:intergenic | 50.0% | |
| AATGCCGAGATTGCACCTGA+AGG | + | chr2_3:35280639-35280658 | None:intergenic | 50.0% | |
| CAGATTGGTGTAGGACTCTC+CGG | - | chr2_3:35280660-35280679 | Msa0289060:intron | 50.0% | |
| CCACATGAATATCCTGCTCC+CGG | + | chr2_3:35280735-35280754 | None:intergenic | 50.0% | |
| CTGCAATACGACTGAGACTG+AGG | + | chr2_3:35280951-35280970 | None:intergenic | 50.0% | |
| CACAAAGCGACGATCACTAC+AGG | - | chr2_3:35281118-35281137 | Msa0289060:intron | 50.0% | |
| CACATTCCAGGACACTGCAT+AGG | + | chr2_3:35281201-35281220 | None:intergenic | 50.0% | |
| ACAACAGCTTGGGTTCTTGG+AGG | + | chr2_3:35281249-35281268 | None:intergenic | 50.0% | |
| GCTTGTCCAACTTGTGCTTG+TGG | - | chr2_3:35281305-35281324 | Msa0289060:intron | 50.0% | |
| GACGGTCCAGATTTCAAGCT+TGG | + | chr2_3:35282239-35282258 | None:intergenic | 50.0% | |
| GGCCATGACACGAACTCCTA+TGG | + | chr2_3:35280164-35280183 | None:intergenic | 55.0% | |
| ACCCGGGATGGACATTAGGA+TGG | - | chr2_3:35280412-35280431 | Msa0289060:CDS | 55.0% | |
| ! | TGTTGCTTGCGCTCCCATCA+TGG | + | chr2_3:35280466-35280485 | None:intergenic | 55.0% |
| GGAGCGCAAGCAACAGAACA+AGG | - | chr2_3:35280471-35280490 | Msa0289060:intron | 55.0% | |
| GGACCCTTCAGGTGCAATCT+CGG | - | chr2_3:35280632-35280651 | Msa0289060:intron | 55.0% | |
| TTGGTGTAGGACTCTCCGGA+AGG | - | chr2_3:35280664-35280683 | Msa0289060:intron | 55.0% | |
| AAATTGCTTGGACCGGGAGC+AGG | - | chr2_3:35280720-35280739 | Msa0289060:intron | 55.0% | |
| CCGGGAGCAGGATATTCATG+TGG | - | chr2_3:35280732-35280751 | Msa0289060:intron | 55.0% | |
| GCACACGAACAGGACAAAGG+TGG | + | chr2_3:35281809-35281828 | None:intergenic | 55.0% | |
| TCTTGGGGACAGGACCCTTC+AGG | - | chr2_3:35280621-35280640 | Msa0289060:intron | 60.0% | |
| GCGTCCTGTGACTGCAACTG+CGG | + | chr2_3:35281620-35281639 | None:intergenic | 60.0% | |
| GTGGCCGCAGTTGCAGTCAC+AGG | - | chr2_3:35281613-35281632 | Msa0289060:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 35279485 | 35282702 | 35279485 | ID=Msa0289060;Name=Msa0289060 |
| chr2_3 | mRNA | 35279485 | 35282702 | 35279485 | ID=Msa0289060-mRNA-1;Parent=Msa0289060;Name=Msa0289060-mRNA-1;_AED=0.11;_eAED=0.11;_QI=30|1|0.83|1|1|1|6|0|453 |
| chr2_3 | exon | 35279485 | 35279771 | 35279485 | ID=Msa0289060-mRNA-1:exon:11397;Parent=Msa0289060-mRNA-1 |
| chr2_3 | exon | 35280182 | 35280471 | 35280182 | ID=Msa0289060-mRNA-1:exon:11396;Parent=Msa0289060-mRNA-1 |
| chr2_3 | exon | 35280833 | 35280980 | 35280833 | ID=Msa0289060-mRNA-1:exon:11395;Parent=Msa0289060-mRNA-1 |
| chr2_3 | exon | 35281365 | 35281821 | 35281365 | ID=Msa0289060-mRNA-1:exon:11394;Parent=Msa0289060-mRNA-1 |
| chr2_3 | exon | 35282386 | 35282465 | 35282386 | ID=Msa0289060-mRNA-1:exon:11393;Parent=Msa0289060-mRNA-1 |
| chr2_3 | exon | 35282573 | 35282702 | 35282573 | ID=Msa0289060-mRNA-1:exon:11392;Parent=Msa0289060-mRNA-1 |
| chr2_3 | five_prime_UTR | 35282673 | 35282702 | 35282673 | ID=Msa0289060-mRNA-1:five_prime_utr;Parent=Msa0289060-mRNA-1 |
| chr2_3 | CDS | 35282573 | 35282672 | 35282573 | ID=Msa0289060-mRNA-1:cds;Parent=Msa0289060-mRNA-1 |
| chr2_3 | CDS | 35282386 | 35282465 | 35282386 | ID=Msa0289060-mRNA-1:cds;Parent=Msa0289060-mRNA-1 |
| chr2_3 | CDS | 35281365 | 35281821 | 35281365 | ID=Msa0289060-mRNA-1:cds;Parent=Msa0289060-mRNA-1 |
| chr2_3 | CDS | 35280833 | 35280980 | 35280833 | ID=Msa0289060-mRNA-1:cds;Parent=Msa0289060-mRNA-1 |
| chr2_3 | CDS | 35280182 | 35280471 | 35280182 | ID=Msa0289060-mRNA-1:cds;Parent=Msa0289060-mRNA-1 |
| chr2_3 | CDS | 35279485 | 35279771 | 35279485 | ID=Msa0289060-mRNA-1:cds;Parent=Msa0289060-mRNA-1 |
| Gene Sequence |
| Protein sequence |
