Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1116460 | AES81493.1 | 96.353 | 329 | 12 | 0 | 1 | 329 | 45 | 373 | 0.0 | 646 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1116460 | sp|Q9LEH3|PER15_IPOBA | 72.393 | 326 | 88 | 1 | 2 | 327 | 4 | 327 | 5.91e-171 | 480 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1116460 | G7KVF1 | 96.353 | 329 | 12 | 0 | 1 | 329 | 45 | 373 | 0.0 | 646 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0618050 | Msa1116460 | 0.833486 | 5.189026e-56 | -8.615850e-47 |
| Msa0618600 | Msa1116460 | 0.852974 | 3.245961e-61 | -8.615850e-47 |
| Msa0643240 | Msa1116460 | 0.823879 | 1.092071e-53 | -8.615850e-47 |
| Msa0657380 | Msa1116460 | 0.858926 | 5.888090e-63 | -8.615850e-47 |
| Msa0682920 | Msa1116460 | 0.855277 | 7.029585e-62 | -8.615850e-47 |
| Msa0708510 | Msa1116460 | 0.894042 | 3.576668e-75 | -8.615850e-47 |
| Msa0221820 | Msa1116460 | 0.805325 | 1.409976e-49 | -8.615850e-47 |
| Msa1035290 | Msa1116460 | 0.917218 | 6.936155e-86 | -8.615850e-47 |
| Msa1075380 | Msa1116460 | 0.992269 | 2.742634e-192 | -8.615850e-47 |
| Msa0250450 | Msa1116460 | 0.867518 | 1.289815e-65 | -8.615850e-47 |
| Msa0263440 | Msa1116460 | 0.896101 | 5.095272e-76 | -8.615850e-47 |
| Msa0289060 | Msa1116460 | 0.818525 | 1.873167e-52 | -8.615850e-47 |
| Msa0289100 | Msa1116460 | 0.815433 | 9.266271e-52 | -8.615850e-47 |
| Msa0301030 | Msa1116460 | 0.912037 | 3.078681e-83 | -8.615850e-47 |
| Msa0314220 | Msa1116460 | 0.832962 | 7.004599e-56 | -8.615850e-47 |
| Msa0327020 | Msa1116460 | 0.832888 | 7.308102e-56 | -8.615850e-47 |
| Msa0338580 | Msa1116460 | 0.874563 | 6.127027e-68 | -8.615850e-47 |
| Msa1116460 | Msa1162860 | 0.849376 | 3.365419e-60 | -8.615850e-47 |
| Msa1116460 | Msa1199250 | 0.876920 | 9.508839e-69 | -8.615850e-47 |
| Msa1116460 | Msa1199260 | 0.831494 | 1.617110e-55 | -8.615850e-47 |
| Msa1116460 | Msa1252480 | 0.854428 | 1.238741e-61 | -8.615850e-47 |
| Msa1116460 | Msa1293220 | 0.815982 | 6.991481e-52 | -8.615850e-47 |
| Msa1116460 | Msa1421310 | 0.864175 | 1.468618e-64 | -8.615850e-47 |
| Msa0485970 | Msa1116460 | 0.844660 | 6.587829e-59 | -8.615850e-47 |
| Msa0547390 | Msa1116460 | 0.852744 | 3.774776e-61 | -8.615850e-47 |
| Msa0564950 | Msa1116460 | 0.827172 | 1.811927e-54 | -8.615850e-47 |
| Msa0565260 | Msa1116460 | 0.848171 | 7.263457e-60 | -8.615850e-47 |
| Msa0580580 | Msa1116460 | 0.831571 | 1.548145e-55 | -8.615850e-47 |
| Msa0602110 | Msa1116460 | 0.827331 | 1.659241e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1116460 | MtrunA17_Chr7g0258811 | 96.353 | 329 | 12 | 0 | 1 | 329 | 45 | 373 | 0.0 | 646 |
| Msa1116460 | MtrunA17_Chr1g0175561 | 75.988 | 329 | 78 | 1 | 1 | 329 | 1 | 328 | 0.0 | 509 |
| Msa1116460 | MtrunA17_Chr2g0292211 | 61.562 | 320 | 118 | 2 | 8 | 327 | 27 | 341 | 3.36e-137 | 393 |
| Msa1116460 | MtrunA17_Chr2g0292251 | 61.564 | 307 | 117 | 1 | 21 | 327 | 24 | 329 | 5.77e-133 | 382 |
| Msa1116460 | MtrunA17_Chr2g0292241 | 59.935 | 307 | 122 | 1 | 21 | 327 | 25 | 330 | 1.23e-132 | 381 |
| Msa1116460 | MtrunA17_Chr2g0292271 | 59.006 | 322 | 128 | 2 | 10 | 328 | 11 | 331 | 1.19e-130 | 376 |
| Msa1116460 | MtrunA17_Chr2g0292181 | 57.012 | 328 | 138 | 2 | 2 | 327 | 13 | 339 | 5.77e-130 | 375 |
| Msa1116460 | MtrunA17_Chr2g0291751 | 58.204 | 323 | 134 | 1 | 5 | 327 | 9 | 330 | 2.82e-128 | 370 |
| Msa1116460 | MtrunA17_Chr2g0292261 | 60.065 | 308 | 122 | 1 | 21 | 328 | 25 | 331 | 1.98e-127 | 368 |
| Msa1116460 | MtrunA17_Chr2g0292091 | 58.147 | 313 | 130 | 1 | 16 | 328 | 15 | 326 | 1.06e-126 | 366 |
| Msa1116460 | MtrunA17_Chr2g0292151 | 58.632 | 307 | 126 | 1 | 21 | 327 | 25 | 330 | 2.73e-126 | 365 |
| Msa1116460 | MtrunA17_Chr4g0070951 | 55.793 | 328 | 140 | 2 | 2 | 327 | 5 | 329 | 2.06e-125 | 362 |
| Msa1116460 | MtrunA17_Chr2g0292111 | 57.655 | 307 | 129 | 1 | 21 | 327 | 25 | 330 | 1.17e-124 | 361 |
| Msa1116460 | MtrunA17_Chr2g0299691 | 55.247 | 324 | 136 | 3 | 10 | 327 | 38 | 358 | 2.59e-122 | 355 |
| Msa1116460 | MtrunA17_Chr2g0292291 | 58.117 | 308 | 127 | 2 | 21 | 327 | 26 | 332 | 1.25e-121 | 353 |
| Msa1116460 | MtrunA17_Chr2g0292101 | 56.869 | 313 | 134 | 1 | 16 | 328 | 16 | 327 | 1.16e-120 | 350 |
| Msa1116460 | MtrunA17_Chr3g0129051 | 55.108 | 323 | 132 | 6 | 8 | 327 | 10 | 322 | 9.34e-119 | 345 |
| Msa1116460 | MtrunA17_Chr3g0129061 | 55.763 | 321 | 130 | 5 | 9 | 327 | 12 | 322 | 9.41e-115 | 335 |
| Msa1116460 | MtrunA17_Chr5g0404721 | 53.465 | 303 | 139 | 2 | 25 | 327 | 30 | 330 | 1.58e-114 | 335 |
| Msa1116460 | MtrunA17_Chr3g0129041 | 55.140 | 321 | 132 | 5 | 9 | 327 | 12 | 322 | 1.08e-111 | 327 |
| Msa1116460 | MtrunA17_Chr8g0372601 | 52.475 | 303 | 142 | 2 | 25 | 327 | 30 | 330 | 2.08e-110 | 324 |
| Msa1116460 | MtrunA17_Chr5g0402571 | 52.500 | 320 | 147 | 4 | 9 | 327 | 11 | 326 | 9.97e-110 | 322 |
| Msa1116460 | MtrunA17_Chr3g0106921 | 51.220 | 328 | 146 | 7 | 3 | 327 | 4 | 320 | 2.91e-108 | 318 |
| Msa1116460 | MtrunA17_Chr5g0402581 | 52.215 | 316 | 145 | 5 | 13 | 327 | 16 | 326 | 2.16e-106 | 313 |
| Msa1116460 | MtrunA17_Chr3g0114451 | 49.538 | 325 | 147 | 4 | 10 | 327 | 4 | 318 | 5.21e-106 | 312 |
| Msa1116460 | MtrunA17_Chr5g0438021 | 49.062 | 320 | 151 | 5 | 10 | 327 | 16 | 325 | 5.76e-106 | 312 |
| Msa1116460 | MtrunA17_Chr2g0320071 | 49.846 | 325 | 151 | 5 | 5 | 327 | 3 | 317 | 1.05e-105 | 311 |
| Msa1116460 | MtrunA17_Chr2g0320061 | 49.231 | 325 | 154 | 5 | 5 | 327 | 3 | 318 | 1.22e-102 | 304 |
| Msa1116460 | MtrunA17_Chr5g0432441 | 48.607 | 323 | 150 | 6 | 10 | 327 | 15 | 326 | 3.04e-102 | 303 |
| Msa1116460 | MtrunA17_Chr2g0320031 | 47.678 | 323 | 158 | 4 | 6 | 327 | 7 | 319 | 3.82e-102 | 303 |
| Msa1116460 | MtrunA17_Chr4g0013171 | 47.734 | 331 | 159 | 6 | 1 | 327 | 1 | 321 | 5.47e-102 | 302 |
| Msa1116460 | MtrunA17_Chr2g0320101 | 50.000 | 326 | 149 | 6 | 5 | 327 | 3 | 317 | 8.35e-102 | 301 |
| Msa1116460 | MtrunA17_Chr4g0043391 | 48.598 | 321 | 154 | 4 | 10 | 327 | 12 | 324 | 1.18e-101 | 301 |
| Msa1116460 | MtrunA17_Chr2g0320051 | 49.837 | 307 | 145 | 3 | 21 | 327 | 21 | 318 | 2.48e-101 | 300 |
| Msa1116460 | MtrunA17_Chr4g0038171 | 48.916 | 323 | 150 | 5 | 10 | 327 | 9 | 321 | 1.45e-100 | 298 |
| Msa1116460 | MtrunA17_Chr7g0244461 | 45.768 | 319 | 163 | 3 | 9 | 327 | 4 | 312 | 3.29e-99 | 295 |
| Msa1116460 | MtrunA17_Chr2g0320091 | 48.750 | 320 | 152 | 5 | 10 | 327 | 9 | 318 | 4.05e-99 | 295 |
| Msa1116460 | MtrunA17_Chr4g0038161 | 47.706 | 327 | 156 | 5 | 7 | 327 | 3 | 320 | 1.92e-98 | 293 |
| Msa1116460 | MtrunA17_Chr4g0038151 | 48.447 | 322 | 153 | 5 | 10 | 327 | 9 | 321 | 3.81e-98 | 292 |
| Msa1116460 | MtrunA17_Chr1g0155611 | 48.185 | 303 | 156 | 1 | 25 | 327 | 46 | 347 | 4.89e-97 | 290 |
| Msa1116460 | MtrunA17_Chr4g0013201 | 46.372 | 317 | 160 | 3 | 11 | 327 | 32 | 338 | 2.46e-96 | 288 |
| Msa1116460 | MtrunA17_Chr5g0400331 | 48.534 | 307 | 153 | 3 | 25 | 327 | 26 | 331 | 1.67e-95 | 286 |
| Msa1116460 | MtrunA17_Chr5g0432351 | 45.370 | 324 | 165 | 5 | 7 | 327 | 7 | 321 | 2.68e-95 | 285 |
| Msa1116460 | MtrunA17_Chr5g0432341 | 45.679 | 324 | 164 | 5 | 7 | 327 | 7 | 321 | 3.37e-95 | 285 |
| Msa1116460 | MtrunA17_Chr7g0244451 | 47.152 | 316 | 157 | 3 | 12 | 327 | 11 | 316 | 5.07e-94 | 282 |
| Msa1116460 | MtrunA17_Chr1g0213061 | 44.753 | 324 | 166 | 6 | 6 | 327 | 9 | 321 | 5.37e-94 | 282 |
| Msa1116460 | MtrunA17_Chr5g0432331 | 45.483 | 321 | 163 | 5 | 10 | 327 | 41 | 352 | 1.40e-93 | 282 |
| Msa1116460 | MtrunA17_Chr4g0013821 | 43.827 | 324 | 171 | 5 | 10 | 328 | 8 | 325 | 3.59e-93 | 281 |
| Msa1116460 | MtrunA17_Chr4g0013721 | 46.254 | 307 | 159 | 4 | 21 | 327 | 96 | 396 | 4.50e-93 | 283 |
| Msa1116460 | MtrunA17_Chr4g0013181 | 48.173 | 301 | 144 | 5 | 29 | 327 | 63 | 353 | 6.12e-93 | 280 |
| Msa1116460 | MtrunA17_Chr4g0068621 | 46.205 | 303 | 159 | 3 | 25 | 327 | 38 | 336 | 2.45e-92 | 278 |
| Msa1116460 | MtrunA17_Chr3g0106901 | 45.912 | 318 | 162 | 3 | 10 | 327 | 16 | 323 | 1.25e-90 | 273 |
| Msa1116460 | MtrunA17_Chr3g0107881 | 44.308 | 325 | 170 | 4 | 6 | 327 | 8 | 324 | 1.42e-89 | 271 |
| Msa1116460 | MtrunA17_Chr4g0024121 | 41.463 | 328 | 187 | 4 | 1 | 327 | 3 | 326 | 9.09e-89 | 269 |
| Msa1116460 | MtrunA17_Chr2g0322861 | 44.548 | 321 | 170 | 6 | 10 | 327 | 71 | 386 | 1.73e-88 | 270 |
| Msa1116460 | MtrunA17_Chr3g0128061 | 42.462 | 325 | 177 | 4 | 7 | 327 | 8 | 326 | 6.91e-88 | 266 |
| Msa1116460 | MtrunA17_Chr4g0063671 | 45.981 | 311 | 153 | 6 | 23 | 327 | 19 | 320 | 2.45e-87 | 265 |
| Msa1116460 | MtrunA17_Chr4g0013191 | 44.551 | 312 | 165 | 4 | 16 | 327 | 37 | 340 | 9.33e-86 | 261 |
| Msa1116460 | MtrunA17_Chr7g0268501 | 43.344 | 323 | 175 | 6 | 6 | 327 | 5 | 320 | 3.24e-85 | 259 |
| Msa1116460 | MtrunA17_Chr7g0268521 | 43.344 | 323 | 175 | 6 | 6 | 327 | 5 | 320 | 3.24e-85 | 259 |
| Msa1116460 | MtrunA17_Chr7g0254201 | 43.934 | 305 | 161 | 6 | 23 | 327 | 18 | 312 | 1.20e-84 | 258 |
| Msa1116460 | MtrunA17_Chr6g0477071 | 44.300 | 307 | 153 | 8 | 23 | 327 | 52 | 342 | 1.11e-83 | 256 |
| Msa1116460 | MtrunA17_Chr5g0405991 | 43.218 | 317 | 168 | 9 | 12 | 327 | 11 | 316 | 2.41e-82 | 252 |
| Msa1116460 | MtrunA17_Chr2g0279041 | 42.943 | 333 | 176 | 7 | 1 | 327 | 1 | 325 | 2.54e-82 | 252 |
| Msa1116460 | MtrunA17_Chr6g0460711 | 43.438 | 320 | 171 | 8 | 9 | 327 | 4 | 314 | 1.63e-81 | 250 |
| Msa1116460 | MtrunA17_Chr1g0204011 | 41.358 | 324 | 179 | 7 | 5 | 327 | 9 | 322 | 3.10e-80 | 247 |
| Msa1116460 | MtrunA17_Chr1g0148021 | 42.724 | 323 | 177 | 5 | 10 | 327 | 9 | 328 | 8.67e-80 | 246 |
| Msa1116460 | MtrunA17_Chr8g0371381 | 43.750 | 304 | 160 | 8 | 25 | 327 | 26 | 319 | 1.12e-79 | 245 |
| Msa1116460 | MtrunA17_Chr1g0188431 | 40.557 | 323 | 178 | 6 | 5 | 327 | 19 | 327 | 3.18e-79 | 244 |
| Msa1116460 | MtrunA17_Chr7g0224371 | 40.867 | 323 | 179 | 5 | 7 | 328 | 12 | 323 | 3.78e-79 | 244 |
| Msa1116460 | MtrunA17_Chr2g0329641 | 41.100 | 309 | 169 | 6 | 24 | 327 | 35 | 335 | 5.85e-79 | 244 |
| Msa1116460 | MtrunA17_Chr5g0421411 | 42.160 | 287 | 160 | 6 | 45 | 327 | 1 | 285 | 1.16e-76 | 236 |
| Msa1116460 | MtrunA17_Chr1g0157051 | 41.250 | 320 | 178 | 7 | 5 | 323 | 4 | 314 | 9.76e-76 | 235 |
| Msa1116460 | MtrunA17_Chr7g0225221 | 41.195 | 318 | 176 | 5 | 12 | 327 | 12 | 320 | 1.21e-75 | 235 |
| Msa1116460 | MtrunA17_Chr4g0072091 | 42.857 | 308 | 165 | 4 | 24 | 327 | 23 | 323 | 3.35e-75 | 234 |
| Msa1116460 | MtrunA17_Chr4g0046131 | 38.824 | 340 | 186 | 7 | 3 | 323 | 6 | 342 | 4.40e-75 | 234 |
| Msa1116460 | MtrunA17_Chr4g0076211 | 41.806 | 299 | 162 | 6 | 30 | 327 | 46 | 333 | 8.23e-75 | 233 |
| Msa1116460 | MtrunA17_Chr2g0296621 | 41.503 | 306 | 164 | 9 | 25 | 328 | 50 | 342 | 9.78e-75 | 233 |
| Msa1116460 | MtrunA17_Chr5g0432401 | 41.411 | 326 | 136 | 7 | 9 | 327 | 9 | 286 | 2.93e-74 | 230 |
| Msa1116460 | MtrunA17_Chr6g0467161 | 39.583 | 336 | 180 | 8 | 2 | 327 | 14 | 336 | 3.08e-74 | 232 |
| Msa1116460 | MtrunA17_Chr2g0316481 | 38.739 | 333 | 170 | 6 | 25 | 326 | 76 | 405 | 1.65e-73 | 232 |
| Msa1116460 | MtrunA17_Chr1g0194151 | 39.940 | 333 | 186 | 7 | 6 | 327 | 4 | 333 | 5.08e-73 | 229 |
| Msa1116460 | MtrunA17_Chr2g0316791 | 38.988 | 336 | 165 | 7 | 25 | 326 | 76 | 405 | 8.84e-73 | 230 |
| Msa1116460 | MtrunA17_Chr5g0401431 | 39.062 | 320 | 187 | 5 | 8 | 323 | 10 | 325 | 3.52e-72 | 226 |
| Msa1116460 | MtrunA17_Chr2g0316831 | 38.739 | 333 | 170 | 6 | 25 | 326 | 112 | 441 | 4.62e-72 | 229 |
| Msa1116460 | MtrunA17_Chr2g0311251 | 39.039 | 333 | 168 | 7 | 25 | 326 | 11 | 339 | 3.18e-71 | 224 |
| Msa1116460 | MtrunA17_Chr1g0194271 | 39.118 | 340 | 186 | 8 | 6 | 327 | 4 | 340 | 3.58e-71 | 224 |
| Msa1116460 | MtrunA17_Chr7g0254231 | 40.196 | 306 | 168 | 7 | 23 | 327 | 20 | 311 | 3.71e-71 | 223 |
| Msa1116460 | MtrunA17_Chr2g0316191 | 38.024 | 334 | 172 | 6 | 25 | 326 | 76 | 406 | 1.07e-70 | 225 |
| Msa1116460 | MtrunA17_Chr4g0053871 | 40.810 | 321 | 175 | 7 | 9 | 323 | 9 | 320 | 1.42e-70 | 222 |
| Msa1116460 | MtrunA17_Chr2g0292281 | 55.714 | 210 | 83 | 2 | 118 | 327 | 17 | 216 | 2.13e-70 | 219 |
| Msa1116460 | MtrunA17_Chr1g0197411 | 36.890 | 328 | 203 | 3 | 2 | 327 | 5 | 330 | 5.17e-70 | 221 |
| Msa1116460 | MtrunA17_Chr1g0164891 | 39.604 | 303 | 176 | 5 | 29 | 327 | 93 | 392 | 2.39e-69 | 221 |
| Msa1116460 | MtrunA17_Chr6g0467121 | 40.836 | 311 | 167 | 7 | 20 | 328 | 69 | 364 | 4.83e-68 | 218 |
| Msa1116460 | MtrunA17_Chr2g0278671 | 39.365 | 315 | 178 | 7 | 18 | 327 | 17 | 323 | 8.07e-68 | 215 |
| Msa1116460 | MtrunA17_Chr2g0279061 | 45.627 | 263 | 131 | 5 | 69 | 327 | 12 | 266 | 2.23e-67 | 212 |
| Msa1116460 | MtrunA17_Chr8g0364291 | 37.695 | 321 | 195 | 4 | 9 | 327 | 7 | 324 | 2.30e-66 | 211 |
| Msa1116460 | MtrunA17_Chr2g0311241 | 35.185 | 378 | 167 | 8 | 25 | 329 | 60 | 432 | 2.45e-66 | 214 |
| Msa1116460 | MtrunA17_Chr5g0413051 | 36.538 | 312 | 190 | 5 | 21 | 327 | 69 | 377 | 3.47e-64 | 207 |
| Msa1116460 | MtrunA17_Chr3g0136751 | 37.888 | 322 | 189 | 5 | 9 | 327 | 9 | 322 | 6.95e-62 | 200 |
| Msa1116460 | MtrunA17_Chr1g0181511 | 36.570 | 309 | 184 | 6 | 23 | 328 | 25 | 324 | 2.26e-61 | 198 |
| Msa1116460 | MtrunA17_Chr6g0467251 | 38.762 | 307 | 172 | 8 | 20 | 323 | 31 | 324 | 6.61e-60 | 195 |
| Msa1116460 | MtrunA17_Chr6g0451571 | 35.692 | 325 | 199 | 6 | 6 | 327 | 17 | 334 | 8.70e-60 | 194 |
| Msa1116460 | MtrunA17_Chr1g0181431 | 35.599 | 309 | 187 | 6 | 23 | 328 | 25 | 324 | 6.69e-58 | 189 |
| Msa1116460 | MtrunA17_Chr1g0181481 | 35.922 | 309 | 186 | 6 | 23 | 328 | 25 | 324 | 2.90e-57 | 188 |
| Msa1116460 | MtrunA17_Chr4g0075241 | 35.082 | 305 | 192 | 4 | 24 | 327 | 28 | 327 | 1.09e-56 | 186 |
| Msa1116460 | MtrunA17_Chr4g0074851 | 34.653 | 303 | 184 | 6 | 25 | 323 | 32 | 324 | 3.78e-55 | 182 |
| Msa1116460 | MtrunA17_Chr3g0114461 | 46.073 | 191 | 95 | 2 | 137 | 327 | 10 | 192 | 2.02e-53 | 174 |
| Msa1116460 | MtrunA17_Chr2g0316811 | 36.972 | 284 | 132 | 5 | 25 | 262 | 50 | 332 | 8.58e-53 | 176 |
| Msa1116460 | MtrunA17_Chr4g0004591 | 30.745 | 322 | 160 | 4 | 25 | 326 | 77 | 355 | 1.79e-48 | 166 |
| Msa1116460 | MtrunA17_Chr2g0316141 | 34.722 | 288 | 135 | 8 | 71 | 326 | 11 | 277 | 5.12e-46 | 157 |
| Msa1116460 | MtrunA17_Chr2g0316181 | 34.722 | 288 | 135 | 8 | 71 | 326 | 11 | 277 | 5.12e-46 | 157 |
| Msa1116460 | MtrunA17_Chr3g0114491 | 60.909 | 110 | 42 | 1 | 24 | 133 | 17 | 125 | 1.12e-38 | 134 |
| Msa1116460 | MtrunA17_Chr1g0181501 | 33.846 | 195 | 118 | 5 | 137 | 328 | 4 | 190 | 3.68e-29 | 110 |
| Msa1116460 | MtrunA17_Chr2g0316771 | 30.168 | 179 | 91 | 4 | 176 | 323 | 7 | 182 | 6.28e-23 | 94.0 |
| Msa1116460 | MtrunA17_Chr5g0432321 | 38.710 | 124 | 68 | 2 | 147 | 270 | 17 | 132 | 6.18e-22 | 89.7 |
| Msa1116460 | MtrunA17_Chr3g0104101 | 36.620 | 142 | 85 | 5 | 190 | 327 | 9 | 149 | 6.84e-21 | 87.4 |
| Msa1116460 | MtrunA17_Chr7g0254181 | 42.424 | 99 | 54 | 1 | 94 | 192 | 27 | 122 | 1.05e-19 | 84.3 |
| Msa1116460 | MtrunA17_Chr6g0468731 | 56.944 | 72 | 26 | 2 | 64 | 135 | 22 | 88 | 1.71e-18 | 79.3 |
| Msa1116460 | MtrunA17_Chr1g0181491 | 39.823 | 113 | 65 | 3 | 23 | 135 | 10 | 119 | 2.24e-18 | 80.5 |
| Msa1116460 | MtrunA17_Chr5g0432361 | 40.860 | 93 | 54 | 1 | 234 | 326 | 17 | 108 | 9.14e-18 | 77.8 |
| Msa1116460 | MtrunA17_Chr4g0013811 | 40.541 | 74 | 44 | 0 | 136 | 209 | 5 | 78 | 7.02e-14 | 66.2 |
| Msa1116460 | MtrunA17_Chr7g0254171 | 34.783 | 138 | 82 | 4 | 71 | 205 | 4 | 136 | 1.07e-13 | 67.4 |
| Msa1116460 | MtrunA17_Chr7g0268491 | 45.238 | 84 | 43 | 2 | 244 | 327 | 17 | 97 | 1.94e-13 | 65.5 |
| Msa1116460 | MtrunA17_Chr3g0137751 | 26.667 | 255 | 136 | 8 | 57 | 308 | 106 | 312 | 2.10e-13 | 70.1 |
| Msa1116460 | MtrunA17_Chr1g0196191 | 52.632 | 76 | 32 | 3 | 59 | 134 | 21 | 92 | 2.31e-13 | 67.0 |
| Msa1116460 | MtrunA17_Chr3g0124821 | 27.500 | 200 | 111 | 7 | 119 | 309 | 180 | 354 | 8.66e-13 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1116460 | AT5G06720.1 | 70.303 | 330 | 93 | 2 | 4 | 329 | 7 | 335 | 5.79e-167 | 468 |
| Msa1116460 | AT5G06730.1 | 68.111 | 323 | 102 | 1 | 6 | 328 | 14 | 335 | 6.17e-158 | 446 |
| Msa1116460 | AT2G38380.1 | 55.723 | 332 | 140 | 5 | 2 | 327 | 3 | 333 | 1.50e-124 | 361 |
| Msa1116460 | AT5G19880.1 | 55.140 | 321 | 140 | 3 | 9 | 327 | 11 | 329 | 2.53e-124 | 360 |
| Msa1116460 | AT2G38390.1 | 55.519 | 308 | 135 | 2 | 21 | 327 | 27 | 333 | 7.95e-123 | 357 |
| Msa1116460 | AT4G08780.1 | 55.340 | 309 | 135 | 3 | 21 | 327 | 20 | 327 | 2.39e-122 | 355 |
| Msa1116460 | AT3G32980.1 | 55.215 | 326 | 142 | 4 | 5 | 327 | 10 | 334 | 1.50e-121 | 353 |
| Msa1116460 | AT4G08770.1 | 55.340 | 309 | 135 | 3 | 21 | 327 | 20 | 327 | 2.71e-120 | 350 |
| Msa1116460 | AT3G49110.1 | 54.462 | 325 | 140 | 4 | 10 | 327 | 13 | 336 | 1.68e-118 | 346 |
| Msa1116460 | AT3G49120.1 | 54.154 | 325 | 144 | 4 | 7 | 327 | 12 | 335 | 3.94e-118 | 345 |
| Msa1116460 | AT5G19890.1 | 54.103 | 329 | 140 | 5 | 1 | 327 | 8 | 327 | 1.76e-117 | 342 |
| Msa1116460 | AT5G66390.1 | 52.769 | 307 | 143 | 2 | 21 | 327 | 29 | 333 | 1.58e-115 | 338 |
| Msa1116460 | AT2G18150.1 | 54.153 | 301 | 136 | 2 | 29 | 329 | 40 | 338 | 3.32e-114 | 334 |
| Msa1116460 | AT4G36430.1 | 53.443 | 305 | 140 | 2 | 23 | 327 | 28 | 330 | 6.79e-114 | 333 |
| Msa1116460 | AT2G18140.1 | 53.488 | 301 | 138 | 2 | 29 | 329 | 39 | 337 | 1.69e-113 | 332 |
| Msa1116460 | AT3G50990.1 | 51.466 | 307 | 147 | 2 | 21 | 327 | 37 | 341 | 1.89e-110 | 325 |
| Msa1116460 | AT5G05340.1 | 51.948 | 308 | 136 | 5 | 22 | 327 | 27 | 324 | 3.22e-106 | 313 |
| Msa1116460 | AT1G44970.1 | 50.980 | 306 | 149 | 1 | 22 | 327 | 42 | 346 | 3.90e-103 | 306 |
| Msa1116460 | AT1G49570.1 | 49.669 | 302 | 146 | 4 | 25 | 323 | 48 | 346 | 1.39e-99 | 298 |
| Msa1116460 | AT2G35380.1 | 51.140 | 307 | 145 | 4 | 25 | 327 | 30 | 335 | 9.38e-99 | 295 |
| Msa1116460 | AT5G58390.1 | 49.379 | 322 | 150 | 6 | 9 | 327 | 5 | 316 | 1.98e-97 | 291 |
| Msa1116460 | AT1G14550.1 | 45.652 | 322 | 166 | 4 | 7 | 327 | 8 | 321 | 2.27e-96 | 288 |
| Msa1116460 | AT5G58400.1 | 47.988 | 323 | 153 | 7 | 10 | 327 | 13 | 325 | 3.90e-96 | 288 |
| Msa1116460 | AT1G14540.1 | 45.652 | 322 | 165 | 4 | 8 | 327 | 2 | 315 | 5.46e-93 | 280 |
| Msa1116460 | AT5G17820.1 | 44.304 | 316 | 163 | 5 | 12 | 327 | 11 | 313 | 8.84e-92 | 276 |
| Msa1116460 | AT2G22420.1 | 43.168 | 322 | 171 | 5 | 6 | 327 | 10 | 319 | 1.34e-91 | 276 |
| Msa1116460 | AT5G17820.2 | 44.304 | 316 | 163 | 5 | 12 | 327 | 64 | 366 | 1.09e-90 | 275 |
| Msa1116460 | AT3G03670.1 | 45.938 | 320 | 167 | 4 | 10 | 327 | 6 | 321 | 9.30e-90 | 271 |
| Msa1116460 | AT1G68850.1 | 42.900 | 331 | 179 | 9 | 5 | 327 | 7 | 335 | 1.20e-89 | 271 |
| Msa1116460 | AT4G16270.1 | 45.667 | 300 | 157 | 5 | 29 | 327 | 54 | 348 | 1.20e-87 | 267 |
| Msa1116460 | AT5G64120.1 | 47.157 | 299 | 149 | 6 | 29 | 327 | 39 | 328 | 5.41e-87 | 265 |
| Msa1116460 | AT3G21770.1 | 44.194 | 310 | 164 | 6 | 17 | 323 | 21 | 324 | 1.74e-86 | 263 |
| Msa1116460 | AT2G41480.1 | 43.425 | 327 | 171 | 7 | 7 | 327 | 10 | 328 | 4.24e-85 | 260 |
| Msa1116460 | AT2G18980.1 | 43.692 | 325 | 171 | 5 | 7 | 327 | 7 | 323 | 2.15e-84 | 258 |
| Msa1116460 | AT5G39580.1 | 47.335 | 319 | 156 | 9 | 12 | 327 | 10 | 319 | 5.03e-84 | 257 |
| Msa1116460 | AT4G11290.1 | 42.991 | 321 | 178 | 4 | 9 | 327 | 9 | 326 | 7.21e-84 | 256 |
| Msa1116460 | AT1G05260.1 | 42.415 | 323 | 175 | 7 | 10 | 327 | 9 | 325 | 2.43e-83 | 255 |
| Msa1116460 | AT4G30170.1 | 43.366 | 309 | 163 | 5 | 23 | 327 | 25 | 325 | 2.19e-81 | 250 |
| Msa1116460 | AT3G01190.1 | 41.693 | 319 | 177 | 6 | 9 | 327 | 12 | 321 | 1.13e-80 | 248 |
| Msa1116460 | AT5G15180.1 | 39.319 | 323 | 187 | 6 | 9 | 327 | 12 | 329 | 4.04e-80 | 247 |
| Msa1116460 | AT4G25980.1 | 41.875 | 320 | 174 | 5 | 13 | 327 | 14 | 326 | 4.48e-80 | 247 |
| Msa1116460 | AT4G37530.1 | 43.689 | 309 | 168 | 4 | 18 | 323 | 20 | 325 | 2.82e-78 | 242 |
| Msa1116460 | AT1G77100.1 | 42.769 | 325 | 171 | 6 | 8 | 327 | 5 | 319 | 3.03e-78 | 242 |
| Msa1116460 | AT5G42180.1 | 41.693 | 319 | 175 | 8 | 9 | 326 | 8 | 316 | 4.21e-78 | 241 |
| Msa1116460 | AT5G51890.1 | 39.628 | 323 | 185 | 7 | 6 | 327 | 9 | 322 | 1.21e-77 | 241 |
| Msa1116460 | AT5G14130.1 | 40.000 | 325 | 189 | 4 | 4 | 327 | 11 | 330 | 2.82e-77 | 240 |
| Msa1116460 | AT5G14130.2 | 40.000 | 325 | 189 | 4 | 4 | 327 | 52 | 371 | 6.49e-77 | 240 |
| Msa1116460 | AT3G49960.1 | 43.038 | 316 | 172 | 6 | 12 | 323 | 14 | 325 | 1.34e-76 | 238 |
| Msa1116460 | AT2G39040.1 | 41.987 | 312 | 171 | 6 | 22 | 327 | 43 | 350 | 1.66e-75 | 236 |
| Msa1116460 | AT1G71695.1 | 42.581 | 310 | 167 | 6 | 20 | 327 | 39 | 339 | 1.08e-74 | 234 |
| Msa1116460 | AT4G37520.1 | 41.447 | 304 | 172 | 4 | 23 | 323 | 25 | 325 | 1.46e-74 | 233 |
| Msa1116460 | AT1G05240.1 | 40.134 | 299 | 168 | 5 | 29 | 323 | 30 | 321 | 1.60e-74 | 233 |
| Msa1116460 | AT1G05250.1 | 40.134 | 299 | 168 | 5 | 29 | 323 | 30 | 321 | 1.60e-74 | 233 |
| Msa1116460 | AT5G64110.1 | 41.641 | 329 | 175 | 7 | 7 | 327 | 11 | 330 | 2.27e-74 | 232 |
| Msa1116460 | AT4G33420.1 | 41.748 | 309 | 165 | 7 | 20 | 327 | 31 | 325 | 1.12e-73 | 230 |
| Msa1116460 | AT2G43480.1 | 39.185 | 319 | 178 | 8 | 16 | 327 | 26 | 335 | 1.24e-73 | 231 |
| Msa1116460 | AT5G64100.1 | 42.333 | 300 | 163 | 6 | 29 | 327 | 41 | 331 | 1.42e-73 | 230 |
| Msa1116460 | AT2G35380.2 | 50.813 | 246 | 117 | 3 | 86 | 327 | 2 | 247 | 3.49e-73 | 226 |
| Msa1116460 | AT4G33420.2 | 41.748 | 309 | 165 | 7 | 20 | 327 | 78 | 372 | 5.45e-73 | 230 |
| Msa1116460 | AT2G34060.1 | 38.762 | 307 | 182 | 5 | 22 | 324 | 39 | 343 | 4.26e-72 | 227 |
| Msa1116460 | AT5G67400.1 | 40.673 | 327 | 184 | 8 | 2 | 323 | 4 | 325 | 6.48e-72 | 226 |
| Msa1116460 | AT4G37520.2 | 40.789 | 304 | 171 | 5 | 23 | 323 | 25 | 322 | 6.68e-72 | 226 |
| Msa1116460 | AT5G24070.1 | 39.937 | 318 | 174 | 9 | 18 | 328 | 29 | 336 | 2.87e-71 | 225 |
| Msa1116460 | AT4G33870.1 | 35.988 | 339 | 178 | 5 | 22 | 325 | 65 | 399 | 5.84e-71 | 226 |
| Msa1116460 | AT1G34510.1 | 39.117 | 317 | 175 | 7 | 13 | 327 | 9 | 309 | 4.32e-70 | 221 |
| Msa1116460 | AT4G37530.2 | 45.594 | 261 | 138 | 3 | 18 | 275 | 20 | 279 | 1.02e-69 | 219 |
| Msa1116460 | AT4G26010.1 | 40.000 | 320 | 168 | 9 | 13 | 327 | 9 | 309 | 2.83e-69 | 219 |
| Msa1116460 | AT4G26010.2 | 40.000 | 320 | 168 | 9 | 13 | 327 | 37 | 337 | 4.74e-69 | 219 |
| Msa1116460 | AT4G17690.1 | 38.487 | 304 | 179 | 3 | 25 | 327 | 26 | 322 | 5.02e-68 | 216 |
| Msa1116460 | AT5G22410.1 | 40.909 | 308 | 167 | 10 | 22 | 324 | 25 | 322 | 2.71e-67 | 214 |
| Msa1116460 | AT4G31760.1 | 39.198 | 324 | 185 | 6 | 8 | 327 | 11 | 326 | 2.59e-66 | 211 |
| Msa1116460 | AT1G30870.1 | 38.961 | 308 | 170 | 9 | 25 | 327 | 51 | 345 | 4.92e-66 | 211 |
| Msa1116460 | AT5G47000.1 | 36.275 | 306 | 188 | 3 | 23 | 327 | 31 | 330 | 1.50e-65 | 210 |
| Msa1116460 | AT2G24800.1 | 38.835 | 309 | 177 | 5 | 23 | 327 | 29 | 329 | 5.00e-65 | 208 |
| Msa1116460 | AT1G24110.1 | 35.604 | 323 | 199 | 6 | 10 | 327 | 4 | 322 | 2.80e-63 | 204 |
| Msa1116460 | AT3G28200.1 | 34.194 | 310 | 191 | 4 | 21 | 327 | 17 | 316 | 1.34e-61 | 199 |
| Msa1116460 | AT4G21960.1 | 36.304 | 303 | 179 | 6 | 25 | 323 | 31 | 323 | 7.39e-60 | 195 |
| Msa1116460 | AT5G40150.1 | 35.390 | 308 | 191 | 3 | 21 | 327 | 28 | 328 | 2.95e-59 | 193 |
| Msa1116460 | AT2G37130.1 | 33.442 | 308 | 192 | 5 | 24 | 327 | 29 | 327 | 5.67e-54 | 180 |
| Msa1116460 | AT2G37130.2 | 33.663 | 303 | 188 | 5 | 29 | 327 | 3 | 296 | 9.55e-54 | 178 |
| Msa1116460 | AT3G17070.1 | 33.856 | 319 | 178 | 8 | 25 | 327 | 38 | 339 | 4.41e-49 | 167 |
| Msa1116460 | AT4G25980.2 | 46.448 | 183 | 93 | 3 | 13 | 195 | 59 | 236 | 3.43e-48 | 164 |
| Msa1116460 | AT5G39580.2 | 48.705 | 193 | 91 | 6 | 12 | 202 | 10 | 196 | 1.10e-46 | 158 |
| Msa1116460 | AT2G24800.2 | 40.462 | 173 | 98 | 1 | 23 | 195 | 29 | 196 | 1.14e-35 | 129 |
| Msa1116460 | AT3G17070.2 | 30.796 | 289 | 170 | 8 | 53 | 327 | 4 | 276 | 2.59e-34 | 127 |
| Msa1116460 | AT3G42570.1 | 34.513 | 113 | 72 | 2 | 82 | 193 | 38 | 149 | 9.93e-14 | 68.2 |
| Msa1116460 | AT1G77490.2 | 26.515 | 264 | 151 | 11 | 59 | 309 | 106 | 339 | 1.48e-13 | 71.6 |
| Msa1116460 | AT1G77490.1 | 26.515 | 264 | 151 | 11 | 59 | 309 | 106 | 339 | 2.04e-13 | 70.9 |
| Msa1116460 | AT4G35970.2 | 29.798 | 198 | 91 | 7 | 82 | 275 | 55 | 208 | 1.64e-12 | 66.6 |
Find 62 sgRNAs with CRISPR-Local
Find 178 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTCCTTGACTTCCCATTAA+TGG | 0.180025 | 7_3:-64033254 | None:intergenic |
| GGGTAATATTAGTCCATTAA+TGG | 0.242444 | 7_3:+64033241 | Msa1116460:CDS |
| TGCTGAAGCTTCTGTATCTT+TGG | 0.257038 | 7_3:+64032220 | Msa1116460:CDS |
| TAAGCCAACAGCAGAAAATT+TGG | 0.257204 | 7_3:-64032501 | None:intergenic |
| TCCAATTGTAGGAAAGTTAA+TGG | 0.269235 | 7_3:+64033284 | Msa1116460:CDS |
| TCCATTAACTTTCCTACAAT+TGG | 0.278391 | 7_3:-64033285 | None:intergenic |
| GAATATTAGCACTGTGAAAA+TGG | 0.281508 | 7_3:-64031788 | None:intergenic |
| TGTGTCTTGTGCTGATATTT+TGG | 0.282472 | 7_3:+64032190 | Msa1116460:CDS |
| GAATTAGGTGCACATACTTT+TGG | 0.305338 | 7_3:+64032888 | Msa1116460:intron |
| CAACAAAATTGTCCACAAAA+TGG | 0.305817 | 7_3:+64033008 | Msa1116460:CDS |
| CATTAGTGGAAAACAATTCT+TGG | 0.347221 | 7_3:-64033133 | None:intergenic |
| CTGAACAACATTTCTCACTA+TGG | 0.348902 | 7_3:-64031881 | None:intergenic |
| CCACGAGCTGAATTATTGTT+AGG | 0.354824 | 7_3:-64032113 | None:intergenic |
| AGTGATCTAGTTGCATTATC+TGG | 0.368131 | 7_3:+64032530 | Msa1116460:CDS |
| TGCAGTCAGGAGGTCCTTCA+TGG | 0.392241 | 7_3:+64032381 | Msa1116460:intron |
| CACTGAAGTTGAATAGTCTT+TGG | 0.398801 | 7_3:-64032935 | None:intergenic |
| TCGAAATTGTTTGGTGATGA+AGG | 0.418026 | 7_3:-64033059 | None:intergenic |
| GGTAATATTAGTCCATTAAT+GGG | 0.424844 | 7_3:+64033242 | Msa1116460:CDS |
| CTCACTATGGAAGAAACATT+GGG | 0.436946 | 7_3:-64031868 | None:intergenic |
| GTTGAATTCAGTGTTGGATC+AGG | 0.449005 | 7_3:-64032969 | None:intergenic |
| AGAAAATTTGGCAGTGACAT+TGG | 0.460032 | 7_3:-64032489 | None:intergenic |
| GATTGTGGCAGCACCATTAG+TGG | 0.462604 | 7_3:-64033147 | None:intergenic |
| GAGAAATTAGATCCAATTGT+AGG | 0.464574 | 7_3:+64033273 | Msa1116460:CDS |
| ATTCTTGGTCCGTTTGAAGA+AGG | 0.471200 | 7_3:-64033118 | None:intergenic |
| AATATTACCCATGTTAATCA+TGG | 0.480311 | 7_3:-64033228 | None:intergenic |
| GCTTTCAGTTGGAGCAGGAA+TGG | 0.491093 | 7_3:-64032462 | None:intergenic |
| GCTAAGCTTTCAGTTGGAGC+AGG | 0.495793 | 7_3:-64032467 | None:intergenic |
| AAATCAAGGCCTTCTTCAAA+CGG | 0.495854 | 7_3:+64033109 | Msa1116460:CDS |
| TAGTTGTTGTCGAAATTGTT+TGG | 0.499968 | 7_3:-64033068 | None:intergenic |
| ACATTGGCTAAGCTTTCAGT+TGG | 0.500974 | 7_3:-64032473 | None:intergenic |
| TCTCACTATGGAAGAAACAT+TGG | 0.503003 | 7_3:-64031869 | None:intergenic |
| CCTTCATGGAATGTACTACT+TGG | 0.512650 | 7_3:+64032395 | Msa1116460:CDS |
| CTATTCAACTTCAGTGGCAC+AGG | 0.520255 | 7_3:+64032942 | Msa1116460:CDS |
| TGTTAAGTCCATGATTAACA+TGG | 0.529221 | 7_3:+64033220 | Msa1116460:CDS |
| GAGCATGTGATGGATTAAGA+AGG | 0.529837 | 7_3:-64031813 | None:intergenic |
| AAAGTAGGAGAAAACATGGT+TGG | 0.544154 | 7_3:-64031760 | None:intergenic |
| CATGAAACTGAAGACGGGTT+AGG | 0.549547 | 7_3:-64031939 | None:intergenic |
| GTACTACTTGGCAGAAGGGA+TGG | 0.553719 | 7_3:+64032407 | Msa1116460:CDS |
| GGTCTGATTGCAAACCAATC+TGG | 0.553725 | 7_3:+64032428 | Msa1116460:CDS |
| CGAAATTGTTTGGTGATGAA+GGG | 0.556805 | 7_3:-64033058 | None:intergenic |
| AATTGTCCACAAAATGGAAG+TGG | 0.563268 | 7_3:+64033014 | Msa1116460:CDS |
| GTTGTTAACAATGGAGATTG+TGG | 0.566203 | 7_3:-64033162 | None:intergenic |
| GTTAAGTCCATGATTAACAT+GGG | 0.566926 | 7_3:+64033221 | Msa1116460:CDS |
| GAATGTACTACTTGGCAGAA+GGG | 0.569042 | 7_3:+64032403 | Msa1116460:CDS |
| CATGTGATGGATTAAGAAGG+AGG | 0.571412 | 7_3:-64031810 | None:intergenic |
| GAGGTTAGTTGAGCATGTGA+TGG | 0.579020 | 7_3:-64031823 | None:intergenic |
| AGATATGTTGAATTCAGTGT+TGG | 0.579335 | 7_3:-64032975 | None:intergenic |
| GGAATGTACTACTTGGCAGA+AGG | 0.583445 | 7_3:+64032402 | Msa1116460:CDS |
| GCTTGCAAAGTTGTTAACAA+TGG | 0.593422 | 7_3:-64033171 | None:intergenic |
| GCAATCATGAAACTGAAGAC+GGG | 0.594589 | 7_3:-64031944 | None:intergenic |
| GTTAATCATGGACTTAACAA+AGG | 0.595376 | 7_3:-64033216 | None:intergenic |
| AGTCCATTAATGGGAAGTCA+AGG | 0.598007 | 7_3:+64033251 | Msa1116460:CDS |
| AGCAATCATGAAACTGAAGA+CGG | 0.599227 | 7_3:-64031945 | None:intergenic |
| TGGATGTGTTGGCACCAGAT+TGG | 0.602779 | 7_3:-64032442 | None:intergenic |
| CCAAGTAGTACATTCCATGA+AGG | 0.604615 | 7_3:-64032395 | None:intergenic |
| CAAAGACTATTCAACTTCAG+TGG | 0.618577 | 7_3:+64032936 | Msa1116460:CDS |
| CTGAAGACGGGTTAGGCTCG+CGG | 0.619803 | 7_3:-64031932 | None:intergenic |
| CCTAACAATAATTCAGCTCG+TGG | 0.620664 | 7_3:+64032113 | Msa1116460:CDS |
| TGGAGCAGGAATGGATGTGT+TGG | 0.622693 | 7_3:-64032453 | None:intergenic |
| TCAGCACAAGACACAACAGC+AGG | 0.630251 | 7_3:-64032182 | None:intergenic |
| GATGTATATTTGCAGTCAGG+AGG | 0.632669 | 7_3:+64032371 | Msa1116460:intron |
| TCACTATGGAAGAAACATTG+GGG | 0.713143 | 7_3:-64031867 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATTAACTAAATATCAATT+AGG | - | chr7_3:64032248-64032267 | None:intergenic | 10.0% |
| !! | TAATTAACTAAATATCAATT+AGG | - | chr7_3:64032248-64032267 | None:intergenic | 10.0% |
| !!! | TTATTAATTTGTGTATTTCA+GGG | + | chr7_3:64032026-64032045 | Msa1116460:intron | 15.0% |
| !! | ATTTCAACAATTATATCTAA+TGG | + | chr7_3:64032720-64032739 | Msa1116460:intron | 15.0% |
| !!! | TTATTAATTTGTGTATTTCA+GGG | + | chr7_3:64032026-64032045 | Msa1116460:intron | 15.0% |
| !! | ATTTCAACAATTATATCTAA+TGG | + | chr7_3:64032720-64032739 | Msa1116460:intron | 15.0% |
| !!! | GTTATTAATTTGTGTATTTC+AGG | + | chr7_3:64032025-64032044 | Msa1116460:intron | 20.0% |
| !! | TAGCAAACTAATATTTATCA+TGG | + | chr7_3:64032299-64032318 | Msa1116460:intron | 20.0% |
| !! | AGACTTTAATTAGAATATGT+TGG | + | chr7_3:64032577-64032596 | Msa1116460:intron | 20.0% |
| !! | TAATTAGAATATGTTGGATT+AGG | + | chr7_3:64032583-64032602 | Msa1116460:intron | 20.0% |
| !! | TATATCTAATGGTTGAAATT+TGG | + | chr7_3:64032731-64032750 | Msa1116460:intron | 20.0% |
| !!! | GTTATTAATTTGTGTATTTC+AGG | + | chr7_3:64032025-64032044 | Msa1116460:intron | 20.0% |
| !! | TAGCAAACTAATATTTATCA+TGG | + | chr7_3:64032299-64032318 | Msa1116460:intron | 20.0% |
| !! | AGACTTTAATTAGAATATGT+TGG | + | chr7_3:64032577-64032596 | Msa1116460:intron | 20.0% |
| !! | TAATTAGAATATGTTGGATT+AGG | + | chr7_3:64032583-64032602 | Msa1116460:intron | 20.0% |
| !! | TATATCTAATGGTTGAAATT+TGG | + | chr7_3:64032731-64032750 | Msa1116460:intron | 20.0% |
| ! | ATAAAAAGTAGGAGAAAACA+TGG | - | chr7_3:64031767-64031786 | None:intergenic | 25.0% |
| ! | GTGAAAATGGAATAAAAAGT+AGG | - | chr7_3:64031778-64031797 | None:intergenic | 25.0% |
| ! | AAGAATCTTCTCAAAAATCA+AGG | + | chr7_3:64033095-64033114 | Msa1116460:CDS | 25.0% |
| ! | AATATTACCCATGTTAATCA+TGG | - | chr7_3:64033231-64033250 | None:intergenic | 25.0% |
| ! | GGTAATATTAGTCCATTAAT+GGG | + | chr7_3:64033242-64033261 | Msa1116460:CDS | 25.0% |
| ! | ATAAAAAGTAGGAGAAAACA+TGG | - | chr7_3:64031767-64031786 | None:intergenic | 25.0% |
| ! | GTGAAAATGGAATAAAAAGT+AGG | - | chr7_3:64031778-64031797 | None:intergenic | 25.0% |
| ! | AAGAATCTTCTCAAAAATCA+AGG | + | chr7_3:64033095-64033114 | Msa1116460:CDS | 25.0% |
| ! | AATATTACCCATGTTAATCA+TGG | - | chr7_3:64033231-64033250 | None:intergenic | 25.0% |
| ! | GGTAATATTAGTCCATTAAT+GGG | + | chr7_3:64033242-64033261 | Msa1116460:CDS | 25.0% |
| GAATATTAGCACTGTGAAAA+TGG | - | chr7_3:64031791-64031810 | None:intergenic | 30.0% | |
| TGATTAATGAGCTAGAGTTT+AGG | + | chr7_3:64031994-64032013 | Msa1116460:intron | 30.0% | |
| ! | GCATCTCTTTTATTAGATCA+AGG | + | chr7_3:64032056-64032075 | Msa1116460:CDS | 30.0% |
| ! | TCTCTTTTATTAGATCAAGG+TGG | + | chr7_3:64032059-64032078 | Msa1116460:CDS | 30.0% |
| ! | TAACTATTGGTTGACACAAA+TGG | + | chr7_3:64032857-64032876 | Msa1116460:intron | 30.0% |
| CAAATGGATCAACTTGAATT+AGG | + | chr7_3:64032873-64032892 | Msa1116460:intron | 30.0% | |
| AGATATGTTGAATTCAGTGT+TGG | - | chr7_3:64032978-64032997 | None:intergenic | 30.0% | |
| CAACAAAATTGTCCACAAAA+TGG | + | chr7_3:64033008-64033027 | Msa1116460:CDS | 30.0% | |
| TAGTTGTTGTCGAAATTGTT+TGG | - | chr7_3:64033071-64033090 | None:intergenic | 30.0% | |
| CATTAGTGGAAAACAATTCT+TGG | - | chr7_3:64033136-64033155 | None:intergenic | 30.0% | |
| ! | CAAGAATTGTTTTCCACTAA+TGG | + | chr7_3:64033134-64033153 | Msa1116460:CDS | 30.0% |
| GTTAATCATGGACTTAACAA+AGG | - | chr7_3:64033219-64033238 | None:intergenic | 30.0% | |
| TGTTAAGTCCATGATTAACA+TGG | + | chr7_3:64033220-64033239 | Msa1116460:CDS | 30.0% | |
| GTTAAGTCCATGATTAACAT+GGG | + | chr7_3:64033221-64033240 | Msa1116460:CDS | 30.0% | |
| GGGTAATATTAGTCCATTAA+TGG | + | chr7_3:64033241-64033260 | Msa1116460:CDS | 30.0% | |
| GAGAAATTAGATCCAATTGT+AGG | + | chr7_3:64033273-64033292 | Msa1116460:CDS | 30.0% | |
| TCCAATTGTAGGAAAGTTAA+TGG | + | chr7_3:64033284-64033303 | Msa1116460:CDS | 30.0% | |
| TCCATTAACTTTCCTACAAT+TGG | - | chr7_3:64033288-64033307 | None:intergenic | 30.0% | |
| GAATATTAGCACTGTGAAAA+TGG | - | chr7_3:64031791-64031810 | None:intergenic | 30.0% | |
| TGATTAATGAGCTAGAGTTT+AGG | + | chr7_3:64031994-64032013 | Msa1116460:intron | 30.0% | |
| ! | GCATCTCTTTTATTAGATCA+AGG | + | chr7_3:64032056-64032075 | Msa1116460:CDS | 30.0% |
| ! | TCTCTTTTATTAGATCAAGG+TGG | + | chr7_3:64032059-64032078 | Msa1116460:CDS | 30.0% |
| ! | TAACTATTGGTTGACACAAA+TGG | + | chr7_3:64032857-64032876 | Msa1116460:intron | 30.0% |
| CAAATGGATCAACTTGAATT+AGG | + | chr7_3:64032873-64032892 | Msa1116460:intron | 30.0% | |
| AGATATGTTGAATTCAGTGT+TGG | - | chr7_3:64032978-64032997 | None:intergenic | 30.0% | |
| CAACAAAATTGTCCACAAAA+TGG | + | chr7_3:64033008-64033027 | Msa1116460:CDS | 30.0% | |
| TAGTTGTTGTCGAAATTGTT+TGG | - | chr7_3:64033071-64033090 | None:intergenic | 30.0% | |
| CATTAGTGGAAAACAATTCT+TGG | - | chr7_3:64033136-64033155 | None:intergenic | 30.0% | |
| ! | CAAGAATTGTTTTCCACTAA+TGG | + | chr7_3:64033134-64033153 | Msa1116460:CDS | 30.0% |
| GTTAATCATGGACTTAACAA+AGG | - | chr7_3:64033219-64033238 | None:intergenic | 30.0% | |
| TGTTAAGTCCATGATTAACA+TGG | + | chr7_3:64033220-64033239 | Msa1116460:CDS | 30.0% | |
| GTTAAGTCCATGATTAACAT+GGG | + | chr7_3:64033221-64033240 | Msa1116460:CDS | 30.0% | |
| GGGTAATATTAGTCCATTAA+TGG | + | chr7_3:64033241-64033260 | Msa1116460:CDS | 30.0% | |
| GAGAAATTAGATCCAATTGT+AGG | + | chr7_3:64033273-64033292 | Msa1116460:CDS | 30.0% | |
| TCCAATTGTAGGAAAGTTAA+TGG | + | chr7_3:64033284-64033303 | Msa1116460:CDS | 30.0% | |
| TCCATTAACTTTCCTACAAT+TGG | - | chr7_3:64033288-64033307 | None:intergenic | 30.0% | |
| AAAGTAGGAGAAAACATGGT+TGG | - | chr7_3:64031763-64031782 | None:intergenic | 35.0% | |
| !!! | TGTTTTCGAGTAGAATGTTG+AGG | - | chr7_3:64031845-64031864 | None:intergenic | 35.0% |
| TCACTATGGAAGAAACATTG+GGG | - | chr7_3:64031870-64031889 | None:intergenic | 35.0% | |
| CTCACTATGGAAGAAACATT+GGG | - | chr7_3:64031871-64031890 | None:intergenic | 35.0% | |
| TCTCACTATGGAAGAAACAT+TGG | - | chr7_3:64031872-64031891 | None:intergenic | 35.0% | |
| CTGAACAACATTTCTCACTA+TGG | - | chr7_3:64031884-64031903 | None:intergenic | 35.0% | |
| AGCAATCATGAAACTGAAGA+CGG | - | chr7_3:64031948-64031967 | None:intergenic | 35.0% | |
| ! | AGGACATGAATTTTCAACAG+AGG | - | chr7_3:64032165-64032184 | None:intergenic | 35.0% |
| !! | TGTGTCTTGTGCTGATATTT+TGG | + | chr7_3:64032190-64032209 | Msa1116460:CDS | 35.0% |
| GATGATGTATATTTGCAGTC+AGG | + | chr7_3:64032368-64032387 | Msa1116460:intron | 35.0% | |
| AGAAAATTTGGCAGTGACAT+TGG | - | chr7_3:64032492-64032511 | None:intergenic | 35.0% | |
| TAAGCCAACAGCAGAAAATT+TGG | - | chr7_3:64032504-64032523 | None:intergenic | 35.0% | |
| AGTGATCTAGTTGCATTATC+TGG | + | chr7_3:64032530-64032549 | Msa1116460:CDS | 35.0% | |
| ! | GAATTAGGTGCACATACTTT+TGG | + | chr7_3:64032888-64032907 | Msa1116460:intron | 35.0% |
| CACTGAAGTTGAATAGTCTT+TGG | - | chr7_3:64032938-64032957 | None:intergenic | 35.0% | |
| CAAAGACTATTCAACTTCAG+TGG | + | chr7_3:64032936-64032955 | Msa1116460:CDS | 35.0% | |
| AATTGTCCACAAAATGGAAG+TGG | + | chr7_3:64033014-64033033 | Msa1116460:CDS | 35.0% | |
| !! | CGAAATTGTTTGGTGATGAA+GGG | - | chr7_3:64033061-64033080 | None:intergenic | 35.0% |
| !! | TCGAAATTGTTTGGTGATGA+AGG | - | chr7_3:64033062-64033081 | None:intergenic | 35.0% |
| AAATCAAGGCCTTCTTCAAA+CGG | + | chr7_3:64033109-64033128 | Msa1116460:CDS | 35.0% | |
| GTTGTTAACAATGGAGATTG+TGG | - | chr7_3:64033165-64033184 | None:intergenic | 35.0% | |
| GCTTGCAAAGTTGTTAACAA+TGG | - | chr7_3:64033174-64033193 | None:intergenic | 35.0% | |
| AGGCTTCAAAAAAAGCTGTT+TGG | - | chr7_3:64033199-64033218 | None:intergenic | 35.0% | |
| AAAGTAGGAGAAAACATGGT+TGG | - | chr7_3:64031763-64031782 | None:intergenic | 35.0% | |
| !!! | TGTTTTCGAGTAGAATGTTG+AGG | - | chr7_3:64031845-64031864 | None:intergenic | 35.0% |
| TCACTATGGAAGAAACATTG+GGG | - | chr7_3:64031870-64031889 | None:intergenic | 35.0% | |
| CTCACTATGGAAGAAACATT+GGG | - | chr7_3:64031871-64031890 | None:intergenic | 35.0% | |
| TCTCACTATGGAAGAAACAT+TGG | - | chr7_3:64031872-64031891 | None:intergenic | 35.0% | |
| CTGAACAACATTTCTCACTA+TGG | - | chr7_3:64031884-64031903 | None:intergenic | 35.0% | |
| AGCAATCATGAAACTGAAGA+CGG | - | chr7_3:64031948-64031967 | None:intergenic | 35.0% | |
| ! | AGGACATGAATTTTCAACAG+AGG | - | chr7_3:64032165-64032184 | None:intergenic | 35.0% |
| !! | TGTGTCTTGTGCTGATATTT+TGG | + | chr7_3:64032190-64032209 | Msa1116460:CDS | 35.0% |
| GATGATGTATATTTGCAGTC+AGG | + | chr7_3:64032368-64032387 | Msa1116460:intron | 35.0% | |
| AGAAAATTTGGCAGTGACAT+TGG | - | chr7_3:64032492-64032511 | None:intergenic | 35.0% | |
| TAAGCCAACAGCAGAAAATT+TGG | - | chr7_3:64032504-64032523 | None:intergenic | 35.0% | |
| AGTGATCTAGTTGCATTATC+TGG | + | chr7_3:64032530-64032549 | Msa1116460:CDS | 35.0% | |
| ! | GAATTAGGTGCACATACTTT+TGG | + | chr7_3:64032888-64032907 | Msa1116460:intron | 35.0% |
| CACTGAAGTTGAATAGTCTT+TGG | - | chr7_3:64032938-64032957 | None:intergenic | 35.0% | |
| CAAAGACTATTCAACTTCAG+TGG | + | chr7_3:64032936-64032955 | Msa1116460:CDS | 35.0% | |
| AATTGTCCACAAAATGGAAG+TGG | + | chr7_3:64033014-64033033 | Msa1116460:CDS | 35.0% | |
| !! | CGAAATTGTTTGGTGATGAA+GGG | - | chr7_3:64033061-64033080 | None:intergenic | 35.0% |
| !! | TCGAAATTGTTTGGTGATGA+AGG | - | chr7_3:64033062-64033081 | None:intergenic | 35.0% |
| AAATCAAGGCCTTCTTCAAA+CGG | + | chr7_3:64033109-64033128 | Msa1116460:CDS | 35.0% | |
| GTTGTTAACAATGGAGATTG+TGG | - | chr7_3:64033165-64033184 | None:intergenic | 35.0% | |
| GCTTGCAAAGTTGTTAACAA+TGG | - | chr7_3:64033174-64033193 | None:intergenic | 35.0% | |
| AGGCTTCAAAAAAAGCTGTT+TGG | - | chr7_3:64033199-64033218 | None:intergenic | 35.0% | |
| !! | CATGTGATGGATTAAGAAGG+AGG | - | chr7_3:64031813-64031832 | None:intergenic | 40.0% |
| !! | GAGCATGTGATGGATTAAGA+AGG | - | chr7_3:64031816-64031835 | None:intergenic | 40.0% |
| GCAATCATGAAACTGAAGAC+GGG | - | chr7_3:64031947-64031966 | None:intergenic | 40.0% | |
| CCACGAGCTGAATTATTGTT+AGG | - | chr7_3:64032116-64032135 | None:intergenic | 40.0% | |
| CCTAACAATAATTCAGCTCG+TGG | + | chr7_3:64032113-64032132 | Msa1116460:CDS | 40.0% | |
| TGCTGAAGCTTCTGTATCTT+TGG | + | chr7_3:64032220-64032239 | Msa1116460:CDS | 40.0% | |
| GATGTATATTTGCAGTCAGG+AGG | + | chr7_3:64032371-64032390 | Msa1116460:intron | 40.0% | |
| CCAAGTAGTACATTCCATGA+AGG | - | chr7_3:64032398-64032417 | None:intergenic | 40.0% | |
| CCTTCATGGAATGTACTACT+TGG | + | chr7_3:64032395-64032414 | Msa1116460:CDS | 40.0% | |
| GAATGTACTACTTGGCAGAA+GGG | + | chr7_3:64032403-64032422 | Msa1116460:CDS | 40.0% | |
| ! | ACATTGGCTAAGCTTTCAGT+TGG | - | chr7_3:64032476-64032495 | None:intergenic | 40.0% |
| ! | ACTGCCAAATTTTCTGCTGT+TGG | + | chr7_3:64032497-64032516 | Msa1116460:CDS | 40.0% |
| ! | GTTGAATTCAGTGTTGGATC+AGG | - | chr7_3:64032972-64032991 | None:intergenic | 40.0% |
| ! | GTGTTACCACTTCCATTTTG+TGG | - | chr7_3:64033023-64033042 | None:intergenic | 40.0% |
| ATTCTTGGTCCGTTTGAAGA+AGG | - | chr7_3:64033121-64033140 | None:intergenic | 40.0% | |
| AGTCCATTAATGGGAAGTCA+AGG | + | chr7_3:64033251-64033270 | Msa1116460:CDS | 40.0% | |
| TCTCCTTGACTTCCCATTAA+TGG | - | chr7_3:64033257-64033276 | None:intergenic | 40.0% | |
| !! | CATGTGATGGATTAAGAAGG+AGG | - | chr7_3:64031813-64031832 | None:intergenic | 40.0% |
| !! | GAGCATGTGATGGATTAAGA+AGG | - | chr7_3:64031816-64031835 | None:intergenic | 40.0% |
| GCAATCATGAAACTGAAGAC+GGG | - | chr7_3:64031947-64031966 | None:intergenic | 40.0% | |
| CCACGAGCTGAATTATTGTT+AGG | - | chr7_3:64032116-64032135 | None:intergenic | 40.0% | |
| CCTAACAATAATTCAGCTCG+TGG | + | chr7_3:64032113-64032132 | Msa1116460:CDS | 40.0% | |
| TGCTGAAGCTTCTGTATCTT+TGG | + | chr7_3:64032220-64032239 | Msa1116460:CDS | 40.0% | |
| GATGTATATTTGCAGTCAGG+AGG | + | chr7_3:64032371-64032390 | Msa1116460:intron | 40.0% | |
| CCAAGTAGTACATTCCATGA+AGG | - | chr7_3:64032398-64032417 | None:intergenic | 40.0% | |
| CCTTCATGGAATGTACTACT+TGG | + | chr7_3:64032395-64032414 | Msa1116460:CDS | 40.0% | |
| GAATGTACTACTTGGCAGAA+GGG | + | chr7_3:64032403-64032422 | Msa1116460:CDS | 40.0% | |
| ! | ACATTGGCTAAGCTTTCAGT+TGG | - | chr7_3:64032476-64032495 | None:intergenic | 40.0% |
| ! | ACTGCCAAATTTTCTGCTGT+TGG | + | chr7_3:64032497-64032516 | Msa1116460:CDS | 40.0% |
| ! | GTTGAATTCAGTGTTGGATC+AGG | - | chr7_3:64032972-64032991 | None:intergenic | 40.0% |
| ! | GTGTTACCACTTCCATTTTG+TGG | - | chr7_3:64033023-64033042 | None:intergenic | 40.0% |
| ATTCTTGGTCCGTTTGAAGA+AGG | - | chr7_3:64033121-64033140 | None:intergenic | 40.0% | |
| AGTCCATTAATGGGAAGTCA+AGG | + | chr7_3:64033251-64033270 | Msa1116460:CDS | 40.0% | |
| TCTCCTTGACTTCCCATTAA+TGG | - | chr7_3:64033257-64033276 | None:intergenic | 40.0% | |
| ! | GAGGTTAGTTGAGCATGTGA+TGG | - | chr7_3:64031826-64031845 | None:intergenic | 45.0% |
| ! | CATGAAACTGAAGACGGGTT+AGG | - | chr7_3:64031942-64031961 | None:intergenic | 45.0% |
| GGAATGTACTACTTGGCAGA+AGG | + | chr7_3:64032402-64032421 | Msa1116460:CDS | 45.0% | |
| GGTCTGATTGCAAACCAATC+TGG | + | chr7_3:64032428-64032447 | Msa1116460:CDS | 45.0% | |
| CTGCACTAACTGAACGACTA+AGG | - | chr7_3:64032696-64032715 | None:intergenic | 45.0% | |
| GTTGAAATTTGGACGCACGA+CGG | + | chr7_3:64032742-64032761 | Msa1116460:intron | 45.0% | |
| CTATTCAACTTCAGTGGCAC+AGG | + | chr7_3:64032942-64032961 | Msa1116460:CDS | 45.0% | |
| ! | GAGGTTAGTTGAGCATGTGA+TGG | - | chr7_3:64031826-64031845 | None:intergenic | 45.0% |
| ! | CATGAAACTGAAGACGGGTT+AGG | - | chr7_3:64031942-64031961 | None:intergenic | 45.0% |
| GGAATGTACTACTTGGCAGA+AGG | + | chr7_3:64032402-64032421 | Msa1116460:CDS | 45.0% | |
| GGTCTGATTGCAAACCAATC+TGG | + | chr7_3:64032428-64032447 | Msa1116460:CDS | 45.0% | |
| CTGCACTAACTGAACGACTA+AGG | - | chr7_3:64032696-64032715 | None:intergenic | 45.0% | |
| GTTGAAATTTGGACGCACGA+CGG | + | chr7_3:64032742-64032761 | Msa1116460:intron | 45.0% | |
| CTATTCAACTTCAGTGGCAC+AGG | + | chr7_3:64032942-64032961 | Msa1116460:CDS | 45.0% | |
| !!! | TTTTTTTTTTTTTTAACTAT+TGG | + | chr7_3:64032844-64032863 | Msa1116460:intron | 5.0% |
| !!! | TTTTTTTTTTTTTTAACTAT+TGG | + | chr7_3:64032844-64032863 | Msa1116460:intron | 5.0% |
| TCAGCACAAGACACAACAGC+AGG | - | chr7_3:64032185-64032204 | None:intergenic | 50.0% | |
| GTACTACTTGGCAGAAGGGA+TGG | + | chr7_3:64032407-64032426 | Msa1116460:CDS | 50.0% | |
| ! | TGGATGTGTTGGCACCAGAT+TGG | - | chr7_3:64032445-64032464 | None:intergenic | 50.0% |
| TGGAGCAGGAATGGATGTGT+TGG | - | chr7_3:64032456-64032475 | None:intergenic | 50.0% | |
| GCTTTCAGTTGGAGCAGGAA+TGG | - | chr7_3:64032465-64032484 | None:intergenic | 50.0% | |
| GCTAAGCTTTCAGTTGGAGC+AGG | - | chr7_3:64032470-64032489 | None:intergenic | 50.0% | |
| GATTGTGGCAGCACCATTAG+TGG | - | chr7_3:64033150-64033169 | None:intergenic | 50.0% | |
| TCAGCACAAGACACAACAGC+AGG | - | chr7_3:64032185-64032204 | None:intergenic | 50.0% | |
| GTACTACTTGGCAGAAGGGA+TGG | + | chr7_3:64032407-64032426 | Msa1116460:CDS | 50.0% | |
| ! | TGGATGTGTTGGCACCAGAT+TGG | - | chr7_3:64032445-64032464 | None:intergenic | 50.0% |
| TGGAGCAGGAATGGATGTGT+TGG | - | chr7_3:64032456-64032475 | None:intergenic | 50.0% | |
| GCTTTCAGTTGGAGCAGGAA+TGG | - | chr7_3:64032465-64032484 | None:intergenic | 50.0% | |
| GCTAAGCTTTCAGTTGGAGC+AGG | - | chr7_3:64032470-64032489 | None:intergenic | 50.0% | |
| GATTGTGGCAGCACCATTAG+TGG | - | chr7_3:64033150-64033169 | None:intergenic | 50.0% | |
| GTTAGGCTCGCGGTAATACG+AGG | - | chr7_3:64031925-64031944 | None:intergenic | 55.0% | |
| TGCAGTCAGGAGGTCCTTCA+TGG | + | chr7_3:64032381-64032400 | Msa1116460:intron | 55.0% | |
| GTTAGGCTCGCGGTAATACG+AGG | - | chr7_3:64031925-64031944 | None:intergenic | 55.0% | |
| TGCAGTCAGGAGGTCCTTCA+TGG | + | chr7_3:64032381-64032400 | Msa1116460:intron | 55.0% | |
| !! | CTGAAGACGGGTTAGGCTCG+CGG | - | chr7_3:64031935-64031954 | None:intergenic | 60.0% |
| !! | CTGAAGACGGGTTAGGCTCG+CGG | - | chr7_3:64031935-64031954 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 64031754 | 64033313 | 64031754 | ID=Msa1116460;Name=Msa1116460 |
| chr7_3 | mRNA | 64031754 | 64033313 | 64031754 | ID=Msa1116460-mRNA-1;Parent=Msa1116460;Name=Msa1116460-mRNA-1;_AED=0.16;_eAED=0.16;_QI=12|1|0.5|1|1|1|4|0|329 |
| chr7_3 | exon | 64031754 | 64031975 | 64031754 | ID=Msa1116460-mRNA-1:exon:15134;Parent=Msa1116460-mRNA-1 |
| chr7_3 | exon | 64032047 | 64032241 | 64032047 | ID=Msa1116460-mRNA-1:exon:15135;Parent=Msa1116460-mRNA-1 |
| chr7_3 | exon | 64032386 | 64032551 | 64032386 | ID=Msa1116460-mRNA-1:exon:15136;Parent=Msa1116460-mRNA-1 |
| chr7_3 | exon | 64032895 | 64033313 | 64032895 | ID=Msa1116460-mRNA-1:exon:15137;Parent=Msa1116460-mRNA-1 |
| chr7_3 | five_prime_UTR | 64031754 | 64031765 | 64031754 | ID=Msa1116460-mRNA-1:five_prime_utr;Parent=Msa1116460-mRNA-1 |
| chr7_3 | CDS | 64031766 | 64031975 | 64031766 | ID=Msa1116460-mRNA-1:cds;Parent=Msa1116460-mRNA-1 |
| chr7_3 | CDS | 64032047 | 64032241 | 64032047 | ID=Msa1116460-mRNA-1:cds;Parent=Msa1116460-mRNA-1 |
| chr7_3 | CDS | 64032386 | 64032551 | 64032386 | ID=Msa1116460-mRNA-1:cds;Parent=Msa1116460-mRNA-1 |
| chr7_3 | CDS | 64032895 | 64033313 | 64032895 | ID=Msa1116460-mRNA-1:cds;Parent=Msa1116460-mRNA-1 |
| Gene Sequence |
| Protein sequence |
