Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0289100 | XP_013464108.1 | 97.955 | 440 | 9 | 0 | 14 | 453 | 3 | 442 | 0.0 | 907 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0289100 | sp|Q9LFW3|COBL4_ARATH | 73.183 | 399 | 103 | 2 | 33 | 431 | 18 | 412 | 0.0 | 648 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0289100 | A0A072V9S0 | 97.955 | 440 | 9 | 0 | 14 | 453 | 3 | 442 | 0.0 | 907 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0250450 | Msa0289100 | 0.870880 | 1.044114e-66 | -8.615850e-47 |
| Msa0263440 | Msa0289100 | 0.833661 | 4.691747e-56 | -8.615850e-47 |
| Msa0289060 | Msa0289100 | 0.990656 | 1.112808e-183 | -8.615850e-47 |
| Msa0289100 | Msa0301030 | 0.850596 | 1.533532e-60 | -8.615850e-47 |
| Msa0289100 | Msa0327020 | 0.895023 | 1.419774e-75 | -8.615850e-47 |
| Msa0289100 | Msa0338580 | 0.801312 | 9.556679e-49 | -8.615850e-47 |
| Msa0289100 | Msa0485970 | 0.820662 | 6.092658e-53 | -8.615850e-47 |
| Msa0289100 | Msa0565260 | 0.819694 | 1.015441e-52 | -8.615850e-47 |
| Msa0289100 | Msa0580580 | 0.812920 | 3.325658e-51 | -8.615850e-47 |
| Msa0289100 | Msa0618050 | 0.811488 | 6.829116e-51 | -8.615850e-47 |
| Msa0289100 | Msa0657380 | 0.822861 | 1.888390e-53 | -8.615850e-47 |
| Msa0289100 | Msa0682920 | 0.816490 | 5.383989e-52 | -8.615850e-47 |
| Msa0289100 | Msa0708510 | 0.866223 | 3.336694e-65 | -8.615850e-47 |
| Msa0289100 | Msa1075380 | 0.821272 | 4.410587e-53 | -8.615850e-47 |
| Msa0289100 | Msa1116460 | 0.815433 | 9.266271e-52 | -8.615850e-47 |
| Msa0289100 | Msa1162860 | 0.806693 | 7.268530e-50 | -8.615850e-47 |
| Msa0289100 | Msa1199250 | 0.815261 | 1.011948e-51 | -8.615850e-47 |
| Msa0289100 | Msa1421310 | 0.940460 | 2.246582e-100 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0289100 | MtrunA17_Chr2g0308371 | 97.955 | 440 | 9 | 0 | 14 | 453 | 3 | 442 | 0.0 | 907 |
| Msa0289100 | MtrunA17_Chr6g0455411 | 69.324 | 414 | 123 | 1 | 17 | 430 | 1 | 410 | 0.0 | 643 |
| Msa0289100 | MtrunA17_Chr7g0219931 | 65.967 | 429 | 139 | 2 | 17 | 445 | 1 | 422 | 0.0 | 634 |
| Msa0289100 | MtrunA17_Chr2g0308381 | 60.550 | 436 | 164 | 3 | 19 | 451 | 18 | 448 | 0.0 | 586 |
| Msa0289100 | MtrunA17_Chr7g0219921 | 60.138 | 434 | 162 | 4 | 25 | 452 | 17 | 445 | 0.0 | 575 |
| Msa0289100 | MtrunA17_Chr6g0455401 | 57.650 | 451 | 175 | 5 | 1 | 447 | 1 | 439 | 0.0 | 561 |
| Msa0289100 | MtrunA17_Chr6g0455391 | 58.105 | 401 | 153 | 4 | 33 | 429 | 25 | 414 | 3.62e-180 | 509 |
| Msa0289100 | MtrunA17_Chr2g0333731 | 50.714 | 420 | 196 | 4 | 34 | 446 | 27 | 442 | 2.19e-173 | 493 |
| Msa0289100 | MtrunA17_Chr3g0145441 | 40.233 | 430 | 239 | 9 | 27 | 444 | 32 | 455 | 5.88e-118 | 353 |
| Msa0289100 | MtrunA17_Chr2g0294901 | 29.087 | 471 | 273 | 22 | 30 | 453 | 197 | 653 | 1.04e-35 | 139 |
| Msa0289100 | MtrunA17_Chr4g0068011 | 28.200 | 461 | 270 | 21 | 4 | 418 | 173 | 618 | 4.22e-34 | 135 |
| Msa0289100 | MtrunA17_Chr5g0394101 | 28.029 | 421 | 246 | 18 | 43 | 418 | 26 | 434 | 3.36e-33 | 130 |
| Msa0289100 | MtrunA17_Chr2g0319581 | 27.273 | 418 | 253 | 18 | 43 | 419 | 226 | 633 | 8.80e-30 | 122 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0289100 | AT5G15630.1 | 73.183 | 399 | 103 | 2 | 33 | 431 | 18 | 412 | 0.0 | 648 |
| Msa0289100 | AT5G15630.3 | 73.158 | 380 | 98 | 2 | 52 | 431 | 1 | 376 | 0.0 | 613 |
| Msa0289100 | AT5G15630.4 | 73.151 | 365 | 94 | 2 | 67 | 431 | 3 | 363 | 0.0 | 591 |
| Msa0289100 | AT5G15630.2 | 73.151 | 365 | 94 | 2 | 67 | 431 | 3 | 363 | 0.0 | 591 |
| Msa0289100 | AT5G60920.1 | 61.305 | 429 | 154 | 4 | 20 | 438 | 15 | 441 | 0.0 | 589 |
| Msa0289100 | AT3G02210.1 | 58.391 | 435 | 170 | 4 | 19 | 450 | 22 | 448 | 0.0 | 566 |
| Msa0289100 | AT5G60920.2 | 63.384 | 396 | 139 | 3 | 47 | 438 | 1 | 394 | 0.0 | 564 |
| Msa0289100 | AT3G29810.1 | 59.569 | 418 | 157 | 4 | 34 | 446 | 27 | 437 | 0.0 | 556 |
| Msa0289100 | AT5G15630.5 | 70.031 | 327 | 94 | 2 | 33 | 359 | 18 | 340 | 0.0 | 509 |
| Msa0289100 | AT1G09790.2 | 48.551 | 414 | 202 | 6 | 17 | 427 | 7 | 412 | 3.51e-141 | 412 |
| Msa0289100 | AT1G09790.1 | 47.529 | 425 | 201 | 7 | 17 | 427 | 7 | 423 | 1.48e-138 | 405 |
| Msa0289100 | AT5G60950.1 | 49.171 | 181 | 84 | 2 | 43 | 223 | 30 | 202 | 1.10e-57 | 189 |
| Msa0289100 | AT4G16120.1 | 28.436 | 422 | 248 | 19 | 43 | 418 | 217 | 630 | 8.10e-39 | 149 |
| Msa0289100 | AT5G49270.1 | 28.205 | 429 | 255 | 19 | 36 | 418 | 210 | 631 | 1.01e-37 | 146 |
| Msa0289100 | AT4G27110.1 | 27.253 | 455 | 277 | 18 | 43 | 451 | 219 | 665 | 1.73e-33 | 134 |
| Msa0289100 | AT3G16860.1 | 28.166 | 458 | 264 | 24 | 43 | 451 | 210 | 651 | 6.16e-33 | 132 |
| Msa0289100 | AT3G20580.1 | 28.289 | 456 | 261 | 21 | 43 | 449 | 229 | 667 | 3.92e-32 | 130 |
Find 115 sgRNAs with CRISPR-Local
Find 201 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCCCATATGATTTCTTTCT+TGG | 0.151399 | 2_3:-35377528 | None:intergenic |
| TCAACTTCAGGCATGGAATT+TGG | 0.180595 | 2_3:+35376589 | Msa0289100:exon |
| CCTAGAAGGGTATACTTTAA+TGG | 0.184050 | 2_3:+35379639 | Msa0289100:CDS |
| TATTTCCAGCAACCTCTTTC+AGG | 0.198489 | 2_3:-35378817 | None:intergenic |
| AACACAACAGCTTGGGTTCT+TGG | 0.235897 | 2_3:-35378335 | None:intergenic |
| GGTAGCCTTTGAGCAGAATT+TGG | 0.247873 | 2_3:-35379705 | None:intergenic |
| ATAACAATTTGGTGATTTCT+TGG | 0.256668 | 2_3:+35376562 | None:intergenic |
| CCATTAAAGTATACCCTTCT+AGG | 0.259971 | 2_3:-35379639 | None:intergenic |
| AACTGTCTTGTTAGTCCTTC+CGG | 0.267626 | 2_3:-35377765 | None:intergenic |
| TGGCGTGTGCATTGCAATAA+AGG | 0.319433 | 2_3:-35378872 | None:intergenic |
| ATTCTACAATGATTTAATAA+TGG | 0.323384 | 2_3:+35379530 | Msa0289100:CDS |
| TTTCTTGGAACTTCAACTTC+AGG | 0.356954 | 2_3:+35376577 | Msa0289100:five_prime_UTR |
| GTGCATTGCAATAAAGGTTT+TGG | 0.357973 | 2_3:-35378866 | None:intergenic |
| GGGTAACATTACTGAGATTA+GGG | 0.358595 | 2_3:-35379021 | None:intergenic |
| TAATGGAAGCTGGGGCTAAA+GGG | 0.368160 | 2_3:+35379547 | Msa0289100:CDS |
| CAAGTTGTTGACTTATTACC+TGG | 0.372283 | 2_3:+35377632 | Msa0289100:CDS |
| GATGACACAGGAATGTTCTA+TGG | 0.385600 | 2_3:+35379501 | Msa0289100:intron |
| TGTTGCTTGCGCTCCCATCA+TGG | 0.386890 | 2_3:-35377549 | None:intergenic |
| ATGGACATCAGATGGTTATA+TGG | 0.392606 | 2_3:+35376866 | Msa0289100:CDS |
| GCATATAAAAGATAATTATA+AGG | 0.394706 | 2_3:+35378919 | Msa0289100:CDS |
| ATGAACCCGGGATGGACATT+AGG | 0.394711 | 2_3:+35377494 | Msa0289100:CDS |
| ATCCCGGGTTCATAATGTTT+CGG | 0.395348 | 2_3:-35377484 | None:intergenic |
| AGGTGGTGTGCTAACATCTT+GGG | 0.396771 | 2_3:+35377691 | Msa0289100:CDS |
| AAGATAATTATAAGGACTAT+TGG | 0.396838 | 2_3:+35378927 | Msa0289100:CDS |
| TGGGTAACATTACTGAGATT+AGG | 0.404033 | 2_3:-35379022 | None:intergenic |
| TTTGATCCATTGGATCCAAC+TGG | 0.408485 | 2_3:+35376813 | Msa0289100:CDS |
| GGGCCAAGAAAGAAATCATA+TGG | 0.421488 | 2_3:+35377525 | Msa0289100:CDS |
| TGAGCAGAATTTGGCAAGAA+AGG | 0.426117 | 2_3:-35379696 | None:intergenic |
| TAGAATGAATTACACACAAT+GGG | 0.426364 | 2_3:+35378982 | Msa0289100:CDS |
| ATATGCCAATGCACACGAAC+AGG | 0.426620 | 2_3:-35378902 | None:intergenic |
| ATAATGGAAGCTGGGGCTAA+AGG | 0.427586 | 2_3:+35379546 | Msa0289100:CDS |
| TCTTGGGGACAGGACCCTTC+AGG | 0.429022 | 2_3:+35377707 | Msa0289100:CDS |
| AACTTACTTATGGCTTCATA+AGG | 0.429069 | 2_3:-35379076 | None:intergenic |
| GGCAAGAAAGGGTATGAATC+AGG | 0.435645 | 2_3:-35379684 | None:intergenic |
| TGTAGAGGCATTTGATCCAT+TGG | 0.442199 | 2_3:+35376803 | Msa0289100:intron |
| AATGATTTAATAATGGAAGC+TGG | 0.446216 | 2_3:+35379537 | Msa0289100:CDS |
| TCTGTAAGAATAACAGTTGA+AGG | 0.452263 | 2_3:-35377857 | None:intergenic |
| AAGATCCTGAAAGAGGTTGC+TGG | 0.460769 | 2_3:+35378812 | Msa0289100:CDS |
| AAATTGCTTGGACCGGGAGC+AGG | 0.463331 | 2_3:+35377806 | Msa0289100:CDS |
| GAGCAGAATTTGGCAAGAAA+GGG | 0.471958 | 2_3:-35379695 | None:intergenic |
| AGAAATCATATGGGCCATGA+TGG | 0.480849 | 2_3:+35377535 | Msa0289100:CDS |
| ATGATTTAATAATGGAAGCT+GGG | 0.480905 | 2_3:+35379538 | Msa0289100:CDS |
| ATAAAGAAACACAACAGCTT+GGG | 0.481011 | 2_3:-35378342 | None:intergenic |
| GTCCATCCTAATGTCCATCC+CGG | 0.482281 | 2_3:-35377500 | None:intergenic |
| CAGATTGGTGTAGGACTCTC+CGG | 0.486499 | 2_3:+35377746 | Msa0289100:CDS |
| TTTGTCCTGTTCGTGTGCAT+TGG | 0.488987 | 2_3:+35378897 | Msa0289100:CDS |
| GGACTTCTCTTGCAACTATG+AGG | 0.491344 | 2_3:-35377608 | None:intergenic |
| TCAGGCATGGAATTTGGTAA+TGG | 0.494974 | 2_3:+35376595 | Msa0289100:exon |
| ATAAGTACATGTCACATTCC+AGG | 0.497470 | 2_3:-35378296 | None:intergenic |
| GATAAAGAAACACAACAGCT+TGG | 0.498328 | 2_3:-35378343 | None:intergenic |
| AGCAGGATATTCATGTGGTC+CGG | 0.500729 | 2_3:+35377823 | Msa0289100:CDS |
| ACATTCCCAGTTGGATCCAA+TGG | 0.502942 | 2_3:-35376819 | None:intergenic |
| CTGGGAATGTGACAATAAGA+TGG | 0.503167 | 2_3:+35376832 | Msa0289100:CDS |
| GCAATCTCGGCATTTCAGAT+TGG | 0.505484 | 2_3:+35377731 | Msa0289100:CDS |
| GGACCCTTCAGGTGCAATCT+CGG | 0.506260 | 2_3:+35377718 | Msa0289100:CDS |
| TGGAACTTCAACTTCAGGCA+TGG | 0.508911 | 2_3:+35376582 | Msa0289100:exon |
| CAAGACAGTTAAACTACCTC+AGG | 0.509450 | 2_3:+35377778 | Msa0289100:CDS |
| ATCTGAGGTGCTTATGAAGA+AGG | 0.516290 | 2_3:+35379578 | Msa0289100:CDS |
| AAGGTGGTGTGCTAACATCT+TGG | 0.517435 | 2_3:+35377690 | Msa0289100:CDS |
| GTCATCATTACAACACTTGT+AGG | 0.519462 | 2_3:-35379726 | None:intergenic |
| CATTTACACTAAAGCAAGGA+TGG | 0.523081 | 2_3:+35379610 | Msa0289100:CDS |
| ACAACAGCTTGGGTTCTTGG+AGG | 0.528958 | 2_3:-35378332 | None:intergenic |
| CTTATTGTCACATTCCCAGT+TGG | 0.532085 | 2_3:-35376828 | None:intergenic |
| TGTATTCAAAACTATAGACT+TGG | 0.537143 | 2_3:-35379042 | None:intergenic |
| GCTTGTCCAACTTGTGCTTG+TGG | 0.548007 | 2_3:+35378391 | Msa0289100:CDS |
| CTCATTCTTATATCTCCAGC+TGG | 0.550563 | 2_3:+35376679 | Msa0289100:CDS |
| TCGGCATTTCAGATTGGTGT+AGG | 0.554531 | 2_3:+35377737 | Msa0289100:CDS |
| TCTTGCCAAATTCTGCTCAA+AGG | 0.554568 | 2_3:+35379700 | Msa0289100:CDS |
| GGTAATAAGTCAACAACTTG+AGG | 0.555852 | 2_3:-35377629 | None:intergenic |
| TACATTTAGAGAGCTGAAGT+TGG | 0.560296 | 2_3:+35376636 | Msa0289100:CDS |
| AAATGATGCAATAATCACAT+AGG | 0.564180 | 2_3:-35379751 | None:intergenic |
| TGCATATTGTAAGATGCTCC+AGG | 0.567353 | 2_3:-35377650 | None:intergenic |
| GAAATCATATGGGCCATGAT+GGG | 0.570678 | 2_3:+35377536 | Msa0289100:CDS |
| TGTGCTAACATCTTGGGGAC+AGG | 0.571959 | 2_3:+35377697 | Msa0289100:CDS |
| TACACAAACTGTTGCAAAGG+TGG | 0.573020 | 2_3:+35377674 | Msa0289100:CDS |
| ATGCCGAGATTGCACCTGAA+GGG | 0.577152 | 2_3:-35377721 | None:intergenic |
| TTGCTGGAAATAACAAGACT+AGG | 0.578763 | 2_3:+35378828 | Msa0289100:CDS |
| CCACATGAATATCCTGCTCC+CGG | 0.579683 | 2_3:-35377818 | None:intergenic |
| GTTGAAGGAACTCTCTTAGC+CGG | 0.580085 | 2_3:-35377842 | None:intergenic |
| GGAGCGCAAGCAACAGAACA+AGG | 0.580360 | 2_3:+35377557 | Msa0289100:CDS |
| CAATACACAAACTGTTGCAA+AGG | 0.581528 | 2_3:+35377671 | Msa0289100:CDS |
| TGATTTAATAATGGAAGCTG+GGG | 0.584574 | 2_3:+35379539 | Msa0289100:CDS |
| TGACAACCACAAGCACAAGT+TGG | 0.585659 | 2_3:-35378397 | None:intergenic |
| TGGGAATGTGACAATAAGAT+GGG | 0.590389 | 2_3:+35376833 | Msa0289100:CDS |
| ATGGCTTCATAAGGAAGAAG+TGG | 0.591100 | 2_3:-35379067 | None:intergenic |
| TCCATCCTAATGTCCATCCC+GGG | 0.595187 | 2_3:-35377499 | None:intergenic |
| AGATTCAAAGATCCTGAAAG+AGG | 0.596172 | 2_3:+35378805 | Msa0289100:CDS |
| AAGTTGGACAAGCTGTGACT+TGG | 0.597255 | 2_3:-35378381 | None:intergenic |
| AATGCCGAGATTGCACCTGA+AGG | 0.597959 | 2_3:-35377722 | None:intergenic |
| AAAGGGTATGAATCAGGAGG+TGG | 0.602047 | 2_3:-35379678 | None:intergenic |
| GGCCAAGAAAGAAATCATAT+GGG | 0.602816 | 2_3:+35377526 | Msa0289100:CDS |
| ATTATGTCATGGACATCAGA+TGG | 0.603721 | 2_3:+35376858 | Msa0289100:CDS |
| GATGGACATTAGGATGGACA+TGG | 0.605342 | 2_3:+35377504 | Msa0289100:CDS |
| GTATTCAAAACTATAGACTT+GGG | 0.605359 | 2_3:-35379041 | None:intergenic |
| AACACATTTACACTAAAGCA+AGG | 0.605862 | 2_3:+35379606 | Msa0289100:CDS |
| ATACCGAAACATTATGAACC+CGG | 0.606089 | 2_3:+35377481 | Msa0289100:CDS |
| ACCCGGGATGGACATTAGGA+TGG | 0.607366 | 2_3:+35377498 | Msa0289100:CDS |
| TACCGAAACATTATGAACCC+GGG | 0.608883 | 2_3:+35377482 | Msa0289100:CDS |
| ATTTACACTAAAGCAAGGAT+GGG | 0.609581 | 2_3:+35379611 | Msa0289100:CDS |
| TTATTCTTACAGATGATCGT+AGG | 0.609804 | 2_3:+35377867 | Msa0289100:CDS |
| TTGATCCATTGGATCCAACT+GGG | 0.610985 | 2_3:+35376814 | Msa0289100:CDS |
| GAAACATTATGAACCCGGGA+TGG | 0.613102 | 2_3:+35377486 | Msa0289100:CDS |
| TAAGATGGGATATTATGTCA+TGG | 0.615769 | 2_3:+35376847 | Msa0289100:CDS |
| GGTGGTGTGCTAACATCTTG+GGG | 0.624710 | 2_3:+35377692 | Msa0289100:CDS |
| ATAGAATGAATTACACACAA+TGG | 0.628977 | 2_3:+35378981 | Msa0289100:CDS |
| TAAAGGGAATGTGCAATCTG+AGG | 0.631122 | 2_3:+35379563 | Msa0289100:CDS |
| CCAAGCAATTTAAAATCCTG+AGG | 0.636131 | 2_3:-35377794 | None:intergenic |
| TTGGTGTAGGACTCTCCGGA+AGG | 0.662739 | 2_3:+35377750 | Msa0289100:CDS |
| AATGCACACGAACAGGACAA+AGG | 0.669891 | 2_3:-35378895 | None:intergenic |
| CCGGGAGCAGGATATTCATG+TGG | 0.685860 | 2_3:+35377818 | Msa0289100:CDS |
| GCACACGAACAGGACAAAGG+TGG | 0.685930 | 2_3:-35378892 | None:intergenic |
| AAGAAAGGGTATGAATCAGG+AGG | 0.687329 | 2_3:-35379681 | None:intergenic |
| ATGGACATTAGGATGGACAT+GGG | 0.698791 | 2_3:+35377505 | Msa0289100:CDS |
| AGAATGAATTACACACAATG+GGG | 0.725776 | 2_3:+35378983 | Msa0289100:CDS |
| ATTGTGTATGCAGATGACAC+AGG | 0.753079 | 2_3:+35379489 | Msa0289100:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTGATAATTTTATTCTTT+TGG | - | chr2_3:35377022-35377041 | None:intergenic | 10.0% |
| !! | AAATAATGTTATAACTTATA+AGG | - | chr2_3:35378738-35378757 | None:intergenic | 10.0% |
| !! | TTATAAGTTATAACATTATT+TGG | + | chr2_3:35378737-35378756 | Msa0289100:intron | 10.0% |
| !! | GCATATAAAAGATAATTATA+AGG | + | chr2_3:35378919-35378938 | Msa0289100:CDS | 15.0% |
| !! | ATTCTACAATGATTTAATAA+TGG | + | chr2_3:35379530-35379549 | Msa0289100:CDS | 15.0% |
| !! | TTGCATATATGAAAAAACAT+AGG | + | chr2_3:35376711-35376730 | Msa0289100:intron | 20.0% |
| !!! | TTATTATGTGTTACTATATC+AGG | - | chr2_3:35377152-35377171 | None:intergenic | 20.0% |
| !! | TTAATATTCGCATAATAACA+CGG | + | chr2_3:35377193-35377212 | Msa0289100:intron | 20.0% |
| !!! | CGAAAAACATATTTTCAAAA+TGG | + | chr2_3:35377279-35377298 | Msa0289100:intron | 20.0% |
| !! | TATTAGATAATACTATTTCC+AGG | - | chr2_3:35378158-35378177 | None:intergenic | 20.0% |
| !! | TAATAGTACATTTGTATTCA+AGG | - | chr2_3:35378236-35378255 | None:intergenic | 20.0% |
| !!! | AAGACTAATAATCATGATTT+TGG | - | chr2_3:35378628-35378647 | None:intergenic | 20.0% |
| !! | AAGATAATTATAAGGACTAT+TGG | + | chr2_3:35378927-35378946 | Msa0289100:CDS | 20.0% |
| !! | ATATTTGAAGAACTTACTTA+TGG | - | chr2_3:35379089-35379108 | None:intergenic | 20.0% |
| !! | TCAAGTAAACAAAATATAGA+CGG | - | chr2_3:35379118-35379137 | None:intergenic | 20.0% |
| !!! | AAATAAATTGGCTTGAAATT+TGG | - | chr2_3:35379283-35379302 | None:intergenic | 20.0% |
| !! | ATAGGGATATTATATGTATT+TGG | - | chr2_3:35379414-35379433 | None:intergenic | 20.0% |
| !!! | TTATTGCATCATTTTTCATT+TGG | + | chr2_3:35379760-35379779 | Msa0289100:CDS | 20.0% |
| !!! | ATCTTATTTTATGCTTGTAG+AGG | + | chr2_3:35376788-35376807 | Msa0289100:intron | 25.0% |
| !!! | CATCATTTTTGGAAACATTT+TGG | - | chr2_3:35376976-35376995 | None:intergenic | 25.0% |
| ! | CTAGAAAAGGATTTGAATAA+TGG | + | chr2_3:35377110-35377129 | Msa0289100:intron | 25.0% |
| ! | AGTAACTGAGATTCATTTAA+AGG | - | chr2_3:35377310-35377329 | None:intergenic | 25.0% |
| !! | GATACTATGATGTCAAATTT+TGG | + | chr2_3:35377426-35377445 | Msa0289100:intron | 25.0% |
| ! | CTATTTGCAATATACTCAAA+GGG | - | chr2_3:35377927-35377946 | None:intergenic | 25.0% |
| ! | ACTATTTGCAATATACTCAA+AGG | - | chr2_3:35377928-35377947 | None:intergenic | 25.0% |
| ! | GAGTATATTGCAAATAGTTA+TGG | + | chr2_3:35377930-35377949 | Msa0289100:intron | 25.0% |
| ! | TAATGTGGAAGTAGAAATTA+AGG | - | chr2_3:35378452-35378471 | None:intergenic | 25.0% |
| ! | TTAAAAGTTGGCTAATAATG+TGG | - | chr2_3:35378467-35378486 | None:intergenic | 25.0% |
| ! | GTTGCATCATAATCATTTAT+AGG | + | chr2_3:35378499-35378518 | Msa0289100:intron | 25.0% |
| ! | GAAATTCAGTCAAATACAAT+TGG | + | chr2_3:35378526-35378545 | Msa0289100:intron | 25.0% |
| !! | AATAATCATGATTTTGGACA+CGG | - | chr2_3:35378622-35378641 | None:intergenic | 25.0% |
| !!! | GATTATTAGTCTTAACCATA+TGG | + | chr2_3:35378635-35378654 | Msa0289100:intron | 25.0% |
| !!! | CACAATATAAAAGGTTTTAG+AGG | - | chr2_3:35378682-35378701 | None:intergenic | 25.0% |
| !!! | CTCTAAAACCTTTTATATTG+TGG | + | chr2_3:35378680-35378699 | Msa0289100:intron | 25.0% |
| ! | ATAGAATGAATTACACACAA+TGG | + | chr2_3:35378981-35379000 | Msa0289100:CDS | 25.0% |
| ! | TAGAATGAATTACACACAAT+GGG | + | chr2_3:35378982-35379001 | Msa0289100:CDS | 25.0% |
| ! | GTATTCAAAACTATAGACTT+GGG | - | chr2_3:35379044-35379063 | None:intergenic | 25.0% |
| ! | TGTATTCAAAACTATAGACT+TGG | - | chr2_3:35379045-35379064 | None:intergenic | 25.0% |
| ! | TTGGATTGTACGATATTAAT+CGG | - | chr2_3:35379264-35379283 | None:intergenic | 25.0% |
| !!! | GTTTTTTTAACTTTTGTGCA+TGG | + | chr2_3:35379462-35379481 | Msa0289100:intron | 25.0% |
| !! | AATGATTTAATAATGGAAGC+TGG | + | chr2_3:35379537-35379556 | Msa0289100:CDS | 25.0% |
| !! | ATGATTTAATAATGGAAGCT+GGG | + | chr2_3:35379538-35379557 | Msa0289100:CDS | 25.0% |
| ! | AAATGATGCAATAATCACAT+AGG | - | chr2_3:35379754-35379773 | None:intergenic | 25.0% |
| TAAGATGGGATATTATGTCA+TGG | + | chr2_3:35376847-35376866 | Msa0289100:CDS | 30.0% | |
| ! | CTGATCATGCTATTCTTTTA+AGG | + | chr2_3:35376910-35376929 | Msa0289100:intron | 30.0% |
| TCCAAAAATGATGAAATCAC+TGG | + | chr2_3:35376983-35377002 | Msa0289100:intron | 30.0% | |
| ! | ACCAGTGATTTCATCATTTT+TGG | - | chr2_3:35376987-35377006 | None:intergenic | 30.0% |
| GAAAAGGATTTGAATAATGG+TGG | + | chr2_3:35377113-35377132 | Msa0289100:intron | 30.0% | |
| TCTGTAAGAATAACAGTTGA+AGG | - | chr2_3:35377860-35377879 | None:intergenic | 30.0% | |
| TTATTCTTACAGATGATCGT+AGG | + | chr2_3:35377867-35377886 | Msa0289100:CDS | 30.0% | |
| TTTAATACTGCCGAGAATTA+TGG | + | chr2_3:35377992-35378011 | Msa0289100:intron | 30.0% | |
| CTACATTTGACCATAATTCT+CGG | - | chr2_3:35378005-35378024 | None:intergenic | 30.0% | |
| ACTGCATAGGAAAAAAATAC+AGG | - | chr2_3:35378274-35378293 | None:intergenic | 30.0% | |
| ATAAAGAAACACAACAGCTT+GGG | - | chr2_3:35378345-35378364 | None:intergenic | 30.0% | |
| ATTTGTCATTATGCAAATGC+AGG | + | chr2_3:35378780-35378799 | Msa0289100:intron | 30.0% | |
| AGAATGAATTACACACAATG+GGG | + | chr2_3:35378983-35379002 | Msa0289100:CDS | 30.0% | |
| AACTTACTTATGGCTTCATA+AGG | - | chr2_3:35379079-35379098 | None:intergenic | 30.0% | |
| AAAATACCAAGCTTGAAATC+TGG | + | chr2_3:35379316-35379335 | Msa0289100:intron | 30.0% | |
| ! | GTTGTCTTATTAAGATCAGA+CGG | - | chr2_3:35379343-35379362 | None:intergenic | 30.0% |
| ATGTGACTCTATGCATTATA+GGG | - | chr2_3:35379431-35379450 | None:intergenic | 30.0% | |
| ! | TGATTTAATAATGGAAGCTG+GGG | + | chr2_3:35379539-35379558 | Msa0289100:CDS | 30.0% |
| AACACATTTACACTAAAGCA+AGG | + | chr2_3:35379606-35379625 | Msa0289100:CDS | 30.0% | |
| ATTTACACTAAAGCAAGGAT+GGG | + | chr2_3:35379611-35379630 | Msa0289100:CDS | 30.0% | |
| TTTCTTGGAACTTCAACTTC+AGG | + | chr2_3:35376577-35376596 | Msa0289100:five_prime_UTR | 35.0% | |
| TACATTTAGAGAGCTGAAGT+TGG | + | chr2_3:35376636-35376655 | Msa0289100:CDS | 35.0% | |
| ATGCAAAGTAATTTACCAGC+TGG | - | chr2_3:35376697-35376716 | None:intergenic | 35.0% | |
| TGGGAATGTGACAATAAGAT+GGG | + | chr2_3:35376833-35376852 | Msa0289100:CDS | 35.0% | |
| ATTATGTCATGGACATCAGA+TGG | + | chr2_3:35376858-35376877 | Msa0289100:CDS | 35.0% | |
| ATGGACATCAGATGGTTATA+TGG | + | chr2_3:35376866-35376885 | Msa0289100:CDS | 35.0% | |
| TAGCATGATCAGACAAAGTT+TGG | - | chr2_3:35376902-35376921 | None:intergenic | 35.0% | |
| TAGATTCGAGAAGCTAGAAA+AGG | + | chr2_3:35377097-35377116 | Msa0289100:intron | 35.0% | |
| GTGTAACACACATAGATGTT+TGG | + | chr2_3:35377215-35377234 | Msa0289100:intron | 35.0% | |
| !! | ATATGTTTTTCGATACGCAC+TGG | - | chr2_3:35377271-35377290 | None:intergenic | 35.0% |
| AATGAATCTCAGTTACTTCG+AGG | + | chr2_3:35377313-35377332 | Msa0289100:intron | 35.0% | |
| ATGAATCTCAGTTACTTCGA+GGG | + | chr2_3:35377314-35377333 | Msa0289100:intron | 35.0% | |
| TTAATCTCCACAATTACACG+TGG | + | chr2_3:35377338-35377357 | Msa0289100:intron | 35.0% | |
| !! | CTATGATGTCAAATTTTGGC+AGG | + | chr2_3:35377430-35377449 | Msa0289100:intron | 35.0% |
| ATACCGAAACATTATGAACC+CGG | + | chr2_3:35377481-35377500 | Msa0289100:CDS | 35.0% | |
| GGCCAAGAAAGAAATCATAT+GGG | + | chr2_3:35377526-35377545 | Msa0289100:CDS | 35.0% | |
| GGTAATAAGTCAACAACTTG+AGG | - | chr2_3:35377632-35377651 | None:intergenic | 35.0% | |
| !! | CAAGTTGTTGACTTATTACC+TGG | + | chr2_3:35377632-35377651 | Msa0289100:CDS | 35.0% |
| CAATACACAAACTGTTGCAA+AGG | + | chr2_3:35377671-35377690 | Msa0289100:CDS | 35.0% | |
| ! | CCAAGCAATTTAAAATCCTG+AGG | - | chr2_3:35377797-35377816 | None:intergenic | 35.0% |
| ! | CCTCAGGATTTTAAATTGCT+TGG | + | chr2_3:35377794-35377813 | Msa0289100:CDS | 35.0% |
| ! | GGATTTTAAATTGCTTGGAC+CGG | + | chr2_3:35377799-35377818 | Msa0289100:CDS | 35.0% |
| ! | GATTTTAAATTGCTTGGACC+GGG | + | chr2_3:35377800-35377819 | Msa0289100:CDS | 35.0% |
| AGGATCTGCAATTACAATCA+AGG | - | chr2_3:35378090-35378109 | None:intergenic | 35.0% | |
| ! | ATCCTTTTCGAAAACCTTGA+TGG | + | chr2_3:35378105-35378124 | Msa0289100:intron | 35.0% |
| ! | AACCATCAAGGTTTTCGAAA+AGG | - | chr2_3:35378110-35378129 | None:intergenic | 35.0% |
| ATAAGTACATGTCACATTCC+AGG | - | chr2_3:35378299-35378318 | None:intergenic | 35.0% | |
| GATAAAGAAACACAACAGCT+TGG | - | chr2_3:35378346-35378365 | None:intergenic | 35.0% | |
| AGATTCAAAGATCCTGAAAG+AGG | + | chr2_3:35378805-35378824 | Msa0289100:CDS | 35.0% | |
| TTGCTGGAAATAACAAGACT+AGG | + | chr2_3:35378828-35378847 | Msa0289100:CDS | 35.0% | |
| ! | GTGCATTGCAATAAAGGTTT+TGG | - | chr2_3:35378869-35378888 | None:intergenic | 35.0% |
| GGGTAACATTACTGAGATTA+GGG | - | chr2_3:35379024-35379043 | None:intergenic | 35.0% | |
| TGGGTAACATTACTGAGATT+AGG | - | chr2_3:35379025-35379044 | None:intergenic | 35.0% | |
| CGACGTCTCTAATACAAATT+CGG | + | chr2_3:35379188-35379207 | Msa0289100:intron | 35.0% | |
| CATTGCAATCAACATGTTTG+TGG | + | chr2_3:35379234-35379253 | Msa0289100:intron | 35.0% | |
| CATGTGACTCTATGCATTAT+AGG | - | chr2_3:35379432-35379451 | None:intergenic | 35.0% | |
| CATTTACACTAAAGCAAGGA+TGG | + | chr2_3:35379610-35379629 | Msa0289100:CDS | 35.0% | |
| CCATTAAAGTATACCCTTCT+AGG | - | chr2_3:35379642-35379661 | None:intergenic | 35.0% | |
| ! | CCTAGAAGGGTATACTTTAA+TGG | + | chr2_3:35379639-35379658 | Msa0289100:CDS | 35.0% |
| GTCATCATTACAACACTTGT+AGG | - | chr2_3:35379729-35379748 | None:intergenic | 35.0% | |
| TCAACTTCAGGCATGGAATT+TGG | + | chr2_3:35376589-35376608 | Msa0289100:exon | 40.0% | |
| TCAGGCATGGAATTTGGTAA+TGG | + | chr2_3:35376595-35376614 | Msa0289100:exon | 40.0% | |
| CTCATTCTTATATCTCCAGC+TGG | + | chr2_3:35376679-35376698 | Msa0289100:CDS | 40.0% | |
| !! | TGTAGAGGCATTTGATCCAT+TGG | + | chr2_3:35376803-35376822 | Msa0289100:intron | 40.0% |
| TTTGATCCATTGGATCCAAC+TGG | + | chr2_3:35376813-35376832 | Msa0289100:CDS | 40.0% | |
| TTGATCCATTGGATCCAACT+GGG | + | chr2_3:35376814-35376833 | Msa0289100:CDS | 40.0% | |
| CTTATTGTCACATTCCCAGT+TGG | - | chr2_3:35376831-35376850 | None:intergenic | 40.0% | |
| CTGGGAATGTGACAATAAGA+TGG | + | chr2_3:35376832-35376851 | Msa0289100:CDS | 40.0% | |
| TGTTTGGATCCCTTAACCAT+AGG | + | chr2_3:35377231-35377250 | Msa0289100:intron | 40.0% | |
| ACACGAACTCCTATGGTTAA+GGG | - | chr2_3:35377243-35377262 | None:intergenic | 40.0% | |
| TGAATCTCAGTTACTTCGAG+GGG | + | chr2_3:35377315-35377334 | Msa0289100:intron | 40.0% | |
| CTATCATCCACGTGTAATTG+TGG | - | chr2_3:35377348-35377367 | None:intergenic | 40.0% | |
| TACCGAAACATTATGAACCC+GGG | + | chr2_3:35377482-35377501 | Msa0289100:CDS | 40.0% | |
| ATCCCGGGTTCATAATGTTT+CGG | - | chr2_3:35377487-35377506 | None:intergenic | 40.0% | |
| ATGGACATTAGGATGGACAT+GGG | + | chr2_3:35377505-35377524 | Msa0289100:CDS | 40.0% | |
| GGGCCAAGAAAGAAATCATA+TGG | + | chr2_3:35377525-35377544 | Msa0289100:CDS | 40.0% | |
| GGCCCATATGATTTCTTTCT+TGG | - | chr2_3:35377531-35377550 | None:intergenic | 40.0% | |
| AGAAATCATATGGGCCATGA+TGG | + | chr2_3:35377535-35377554 | Msa0289100:CDS | 40.0% | |
| GAAATCATATGGGCCATGAT+GGG | + | chr2_3:35377536-35377555 | Msa0289100:CDS | 40.0% | |
| TGCATATTGTAAGATGCTCC+AGG | - | chr2_3:35377653-35377672 | None:intergenic | 40.0% | |
| TACACAAACTGTTGCAAAGG+TGG | + | chr2_3:35377674-35377693 | Msa0289100:CDS | 40.0% | |
| ! | AACTGTCTTGTTAGTCCTTC+CGG | - | chr2_3:35377768-35377787 | None:intergenic | 40.0% |
| CAAGACAGTTAAACTACCTC+AGG | + | chr2_3:35377778-35377797 | Msa0289100:CDS | 40.0% | |
| !! | AGCGTTGATTGTAACCATCA+AGG | - | chr2_3:35378122-35378141 | None:intergenic | 40.0% |
| !! | ACGCTTTAAAGAAACTGTCC+TGG | + | chr2_3:35378137-35378156 | Msa0289100:intron | 40.0% |
| !!! | TTTTTTCCTATGCAGTGTCC+TGG | + | chr2_3:35378278-35378297 | Msa0289100:intron | 40.0% |
| CTCGACAGCAGTTTAAAAGT+TGG | - | chr2_3:35378479-35378498 | None:intergenic | 40.0% | |
| ! | CAACTTTTAAACTGCTGTCG+AGG | + | chr2_3:35378477-35378496 | Msa0289100:intron | 40.0% |
| TAACTGCTATTGCAGCCATA+TGG | - | chr2_3:35378653-35378672 | None:intergenic | 40.0% | |
| AACTGCGGCCACAATATAAA+AGG | - | chr2_3:35378691-35378710 | None:intergenic | 40.0% | |
| TATTTCCAGCAACCTCTTTC+AGG | - | chr2_3:35378820-35378839 | None:intergenic | 40.0% | |
| ATGGCTTCATAAGGAAGAAG+TGG | - | chr2_3:35379070-35379089 | None:intergenic | 40.0% | |
| TTCATACAGTGGCACATATG+CGG | - | chr2_3:35379365-35379384 | None:intergenic | 40.0% | |
| AATTGCACGCATTCATACAG+TGG | - | chr2_3:35379376-35379395 | None:intergenic | 40.0% | |
| ATTGTGTATGCAGATGACAC+AGG | + | chr2_3:35379489-35379508 | Msa0289100:intron | 40.0% | |
| GATGACACAGGAATGTTCTA+TGG | + | chr2_3:35379501-35379520 | Msa0289100:intron | 40.0% | |
| TAAAGGGAATGTGCAATCTG+AGG | + | chr2_3:35379563-35379582 | Msa0289100:CDS | 40.0% | |
| ! | ATCTGAGGTGCTTATGAAGA+AGG | + | chr2_3:35379578-35379597 | Msa0289100:CDS | 40.0% |
| ! | AAGAAAGGGTATGAATCAGG+AGG | - | chr2_3:35379684-35379703 | None:intergenic | 40.0% |
| GAGCAGAATTTGGCAAGAAA+GGG | - | chr2_3:35379698-35379717 | None:intergenic | 40.0% | |
| TGAGCAGAATTTGGCAAGAA+AGG | - | chr2_3:35379699-35379718 | None:intergenic | 40.0% | |
| TCTTGCCAAATTCTGCTCAA+AGG | + | chr2_3:35379700-35379719 | Msa0289100:CDS | 40.0% | |
| TGGAACTTCAACTTCAGGCA+TGG | + | chr2_3:35376582-35376601 | Msa0289100:exon | 45.0% | |
| ACATTCCCAGTTGGATCCAA+TGG | - | chr2_3:35376822-35376841 | None:intergenic | 45.0% | |
| GACACGAACTCCTATGGTTA+AGG | - | chr2_3:35377244-35377263 | None:intergenic | 45.0% | |
| AACCATAGGAGTTCGTGTCA+TGG | + | chr2_3:35377245-35377264 | Msa0289100:intron | 45.0% | |
| GAAACATTATGAACCCGGGA+TGG | + | chr2_3:35377486-35377505 | Msa0289100:CDS | 45.0% | |
| GATGGACATTAGGATGGACA+TGG | + | chr2_3:35377504-35377523 | Msa0289100:CDS | 45.0% | |
| GGACTTCTCTTGCAACTATG+AGG | - | chr2_3:35377611-35377630 | None:intergenic | 45.0% | |
| AAGGTGGTGTGCTAACATCT+TGG | + | chr2_3:35377690-35377709 | Msa0289100:CDS | 45.0% | |
| AGGTGGTGTGCTAACATCTT+GGG | + | chr2_3:35377691-35377710 | Msa0289100:CDS | 45.0% | |
| GCAATCTCGGCATTTCAGAT+TGG | + | chr2_3:35377731-35377750 | Msa0289100:CDS | 45.0% | |
| TCGGCATTTCAGATTGGTGT+AGG | + | chr2_3:35377737-35377756 | Msa0289100:CDS | 45.0% | |
| AGCAGGATATTCATGTGGTC+CGG | + | chr2_3:35377823-35377842 | Msa0289100:CDS | 45.0% | |
| GTTGAAGGAACTCTCTTAGC+CGG | - | chr2_3:35377845-35377864 | None:intergenic | 45.0% | |
| AACACAACAGCTTGGGTTCT+TGG | - | chr2_3:35378338-35378357 | None:intergenic | 45.0% | |
| AAGTTGGACAAGCTGTGACT+TGG | - | chr2_3:35378384-35378403 | None:intergenic | 45.0% | |
| TGACAACCACAAGCACAAGT+TGG | - | chr2_3:35378400-35378419 | None:intergenic | 45.0% | |
| AAGATCCTGAAAGAGGTTGC+TGG | + | chr2_3:35378812-35378831 | Msa0289100:CDS | 45.0% | |
| TGGCGTGTGCATTGCAATAA+AGG | - | chr2_3:35378875-35378894 | None:intergenic | 45.0% | |
| AATGCACACGAACAGGACAA+AGG | - | chr2_3:35378898-35378917 | None:intergenic | 45.0% | |
| TTTGTCCTGTTCGTGTGCAT+TGG | + | chr2_3:35378897-35378916 | Msa0289100:CDS | 45.0% | |
| ATATGCCAATGCACACGAAC+AGG | - | chr2_3:35378905-35378924 | None:intergenic | 45.0% | |
| ! | ATAATGGAAGCTGGGGCTAA+AGG | + | chr2_3:35379546-35379565 | Msa0289100:CDS | 45.0% |
| TAATGGAAGCTGGGGCTAAA+GGG | + | chr2_3:35379547-35379566 | Msa0289100:CDS | 45.0% | |
| !! | AAGGATGGGCTTTTCCTAGA+AGG | + | chr2_3:35379625-35379644 | Msa0289100:CDS | 45.0% |
| !! | AGGATGGGCTTTTCCTAGAA+GGG | + | chr2_3:35379626-35379645 | Msa0289100:CDS | 45.0% |
| ! | AAAGGGTATGAATCAGGAGG+TGG | - | chr2_3:35379681-35379700 | None:intergenic | 45.0% |
| ! | GGCAAGAAAGGGTATGAATC+AGG | - | chr2_3:35379687-35379706 | None:intergenic | 45.0% |
| GGTAGCCTTTGAGCAGAATT+TGG | - | chr2_3:35379708-35379727 | None:intergenic | 45.0% | |
| !! | GATTAAAAAAATAAATAAAT+TGG | - | chr2_3:35379295-35379314 | None:intergenic | 5.0% |
| ATGAACCCGGGATGGACATT+AGG | + | chr2_3:35377494-35377513 | Msa0289100:CDS | 50.0% | |
| TCCATCCTAATGTCCATCCC+GGG | - | chr2_3:35377502-35377521 | None:intergenic | 50.0% | |
| GTCCATCCTAATGTCCATCC+CGG | - | chr2_3:35377503-35377522 | None:intergenic | 50.0% | |
| GGTGGTGTGCTAACATCTTG+GGG | + | chr2_3:35377692-35377711 | Msa0289100:CDS | 50.0% | |
| TGTGCTAACATCTTGGGGAC+AGG | + | chr2_3:35377697-35377716 | Msa0289100:CDS | 50.0% | |
| ATGCCGAGATTGCACCTGAA+GGG | - | chr2_3:35377724-35377743 | None:intergenic | 50.0% | |
| AATGCCGAGATTGCACCTGA+AGG | - | chr2_3:35377725-35377744 | None:intergenic | 50.0% | |
| CAGATTGGTGTAGGACTCTC+CGG | + | chr2_3:35377746-35377765 | Msa0289100:CDS | 50.0% | |
| CCACATGAATATCCTGCTCC+CGG | - | chr2_3:35377821-35377840 | None:intergenic | 50.0% | |
| CTGCAATACGACTGAGACTG+AGG | - | chr2_3:35378037-35378056 | None:intergenic | 50.0% | |
| CACAAAGCGACGATCACTAC+AGG | + | chr2_3:35378204-35378223 | Msa0289100:intron | 50.0% | |
| CACATTCCAGGACACTGCAT+AGG | - | chr2_3:35378287-35378306 | None:intergenic | 50.0% | |
| ACAACAGCTTGGGTTCTTGG+AGG | - | chr2_3:35378335-35378354 | None:intergenic | 50.0% | |
| GCTTGTCCAACTTGTGCTTG+TGG | + | chr2_3:35378391-35378410 | Msa0289100:CDS | 50.0% | |
| GACGGTCCAGATTTCAAGCT+TGG | - | chr2_3:35379325-35379344 | None:intergenic | 50.0% | |
| GGCCATGACACGAACTCCTA+TGG | - | chr2_3:35377250-35377269 | None:intergenic | 55.0% | |
| ACCCGGGATGGACATTAGGA+TGG | + | chr2_3:35377498-35377517 | Msa0289100:CDS | 55.0% | |
| ! | TGTTGCTTGCGCTCCCATCA+TGG | - | chr2_3:35377552-35377571 | None:intergenic | 55.0% |
| GGAGCGCAAGCAACAGAACA+AGG | + | chr2_3:35377557-35377576 | Msa0289100:CDS | 55.0% | |
| GGACCCTTCAGGTGCAATCT+CGG | + | chr2_3:35377718-35377737 | Msa0289100:CDS | 55.0% | |
| TTGGTGTAGGACTCTCCGGA+AGG | + | chr2_3:35377750-35377769 | Msa0289100:CDS | 55.0% | |
| AAATTGCTTGGACCGGGAGC+AGG | + | chr2_3:35377806-35377825 | Msa0289100:CDS | 55.0% | |
| CCGGGAGCAGGATATTCATG+TGG | + | chr2_3:35377818-35377837 | Msa0289100:CDS | 55.0% | |
| GCACACGAACAGGACAAAGG+TGG | - | chr2_3:35378895-35378914 | None:intergenic | 55.0% | |
| TCTTGGGGACAGGACCCTTC+AGG | + | chr2_3:35377707-35377726 | Msa0289100:CDS | 60.0% | |
| GCGTCCTGTGACTGCAACTG+CGG | - | chr2_3:35378706-35378725 | None:intergenic | 60.0% | |
| GTGGCCGCAGTTGCAGTCAC+AGG | + | chr2_3:35378699-35378718 | Msa0289100:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 35376571 | 35379788 | 35376571 | ID=Msa0289100;Name=Msa0289100 |
| chr2_3 | mRNA | 35376571 | 35379788 | 35376571 | ID=Msa0289100-mRNA-1;Parent=Msa0289100;Name=Msa0289100-mRNA-1;_AED=0.11;_eAED=0.11;_QI=30|1|0.83|1|1|1|6|0|453 |
| chr2_3 | exon | 35376571 | 35376700 | 35376571 | ID=Msa0289100-mRNA-1:exon:11405;Parent=Msa0289100-mRNA-1 |
| chr2_3 | exon | 35376808 | 35376887 | 35376808 | ID=Msa0289100-mRNA-1:exon:11406;Parent=Msa0289100-mRNA-1 |
| chr2_3 | exon | 35377452 | 35377908 | 35377452 | ID=Msa0289100-mRNA-1:exon:11407;Parent=Msa0289100-mRNA-1 |
| chr2_3 | exon | 35378293 | 35378440 | 35378293 | ID=Msa0289100-mRNA-1:exon:11408;Parent=Msa0289100-mRNA-1 |
| chr2_3 | exon | 35378802 | 35379091 | 35378802 | ID=Msa0289100-mRNA-1:exon:11409;Parent=Msa0289100-mRNA-1 |
| chr2_3 | exon | 35379502 | 35379788 | 35379502 | ID=Msa0289100-mRNA-1:exon:11410;Parent=Msa0289100-mRNA-1 |
| chr2_3 | five_prime_UTR | 35376571 | 35376600 | 35376571 | ID=Msa0289100-mRNA-1:five_prime_utr;Parent=Msa0289100-mRNA-1 |
| chr2_3 | CDS | 35376601 | 35376700 | 35376601 | ID=Msa0289100-mRNA-1:cds;Parent=Msa0289100-mRNA-1 |
| chr2_3 | CDS | 35376808 | 35376887 | 35376808 | ID=Msa0289100-mRNA-1:cds;Parent=Msa0289100-mRNA-1 |
| chr2_3 | CDS | 35377452 | 35377908 | 35377452 | ID=Msa0289100-mRNA-1:cds;Parent=Msa0289100-mRNA-1 |
| chr2_3 | CDS | 35378293 | 35378440 | 35378293 | ID=Msa0289100-mRNA-1:cds;Parent=Msa0289100-mRNA-1 |
| chr2_3 | CDS | 35378802 | 35379091 | 35378802 | ID=Msa0289100-mRNA-1:cds;Parent=Msa0289100-mRNA-1 |
| chr2_3 | CDS | 35379502 | 35379788 | 35379502 | ID=Msa0289100-mRNA-1:cds;Parent=Msa0289100-mRNA-1 |
| Gene Sequence |
| Protein sequence |
