Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0250450 | XP_013464108.1 | 98.182 | 440 | 8 | 0 | 14 | 453 | 3 | 442 | 0.0 | 909 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0250450 | sp|Q9LFW3|COBL4_ARATH | 73.183 | 399 | 103 | 2 | 33 | 431 | 18 | 412 | 0.0 | 647 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0250450 | A0A072V9S0 | 98.182 | 440 | 8 | 0 | 14 | 453 | 3 | 442 | 0.0 | 909 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0221830 | Msa0250450 | 0.808396 | 3.161519e-50 | -8.615850e-47 |
| Msa0250450 | Msa0263440 | 0.877213 | 7.526521e-69 | -8.615850e-47 |
| Msa0250450 | Msa0289060 | 0.871245 | 7.912914e-67 | -8.615850e-47 |
| Msa0250450 | Msa0289100 | 0.870880 | 1.044114e-66 | -8.615850e-47 |
| Msa0250450 | Msa0301030 | 0.899026 | 2.976027e-77 | -8.615850e-47 |
| Msa0250450 | Msa0314220 | 0.813394 | 2.616727e-51 | -8.615850e-47 |
| Msa0250450 | Msa0327020 | 0.925463 | 1.773587e-90 | -8.615850e-47 |
| Msa0250450 | Msa0338580 | 0.842709 | 2.191596e-58 | -8.615850e-47 |
| Msa0250450 | Msa0485970 | 0.886264 | 3.979523e-72 | -8.615850e-47 |
| Msa0250450 | Msa0547390 | 0.852605 | 4.137743e-61 | -8.615850e-47 |
| Msa0250450 | Msa0564950 | 0.870337 | 1.574315e-66 | -8.615850e-47 |
| Msa0250450 | Msa0565260 | 0.823806 | 1.136202e-53 | -8.615850e-47 |
| Msa0250450 | Msa0580580 | 0.878162 | 3.510943e-69 | -8.615850e-47 |
| Msa0250450 | Msa0602110 | 0.831075 | 2.050334e-55 | -8.615850e-47 |
| Msa0250450 | Msa0618050 | 0.881971 | 1.539704e-70 | -8.615850e-47 |
| Msa0250450 | Msa0618600 | 0.875409 | 3.152672e-68 | -8.615850e-47 |
| Msa0250450 | Msa0643240 | 0.822623 | 2.145263e-53 | -8.615850e-47 |
| Msa0250450 | Msa0657380 | 0.826946 | 2.051734e-54 | -8.615850e-47 |
| Msa0250450 | Msa0682920 | 0.804485 | 2.112123e-49 | -8.615850e-47 |
| Msa0250450 | Msa0708510 | 0.875277 | 3.496534e-68 | -8.615850e-47 |
| Msa0250450 | Msa1035290 | 0.841960 | 3.460118e-58 | -8.615850e-47 |
| Msa0250450 | Msa1075380 | 0.875785 | 2.343726e-68 | -8.615850e-47 |
| Msa0250450 | Msa1116460 | 0.867518 | 1.289815e-65 | -8.615850e-47 |
| Msa0250450 | Msa1162860 | 0.862333 | 5.457990e-64 | -8.615850e-47 |
| Msa0250450 | Msa1199250 | 0.840256 | 9.700282e-58 | -8.615850e-47 |
| Msa0250450 | Msa1199260 | 0.828183 | 1.035500e-54 | -8.615850e-47 |
| Msa0250450 | Msa1252480 | 0.828366 | 9.357374e-55 | -8.615850e-47 |
| Msa0250450 | Msa1421310 | 0.947645 | 4.497101e-106 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0250450 | MtrunA17_Chr2g0308371 | 98.182 | 440 | 8 | 0 | 14 | 453 | 3 | 442 | 0.0 | 909 |
| Msa0250450 | MtrunA17_Chr6g0455411 | 69.324 | 414 | 123 | 1 | 17 | 430 | 1 | 410 | 0.0 | 642 |
| Msa0250450 | MtrunA17_Chr7g0219931 | 65.967 | 429 | 139 | 2 | 17 | 445 | 1 | 422 | 0.0 | 634 |
| Msa0250450 | MtrunA17_Chr2g0308381 | 60.321 | 436 | 165 | 3 | 19 | 451 | 18 | 448 | 0.0 | 586 |
| Msa0250450 | MtrunA17_Chr7g0219921 | 59.908 | 434 | 163 | 4 | 25 | 452 | 17 | 445 | 0.0 | 574 |
| Msa0250450 | MtrunA17_Chr6g0455401 | 57.650 | 451 | 175 | 5 | 1 | 447 | 1 | 439 | 0.0 | 561 |
| Msa0250450 | MtrunA17_Chr6g0455391 | 58.105 | 401 | 153 | 4 | 33 | 429 | 25 | 414 | 6.60e-180 | 509 |
| Msa0250450 | MtrunA17_Chr2g0333731 | 50.714 | 420 | 196 | 4 | 34 | 446 | 27 | 442 | 4.45e-173 | 493 |
| Msa0250450 | MtrunA17_Chr3g0145441 | 40.233 | 430 | 239 | 9 | 27 | 444 | 32 | 455 | 4.11e-118 | 353 |
| Msa0250450 | MtrunA17_Chr2g0294901 | 28.875 | 471 | 274 | 22 | 30 | 453 | 197 | 653 | 2.63e-35 | 138 |
| Msa0250450 | MtrunA17_Chr4g0068011 | 28.416 | 461 | 269 | 21 | 4 | 418 | 173 | 618 | 1.08e-34 | 137 |
| Msa0250450 | MtrunA17_Chr5g0394101 | 28.266 | 421 | 245 | 18 | 43 | 418 | 26 | 434 | 9.91e-34 | 132 |
| Msa0250450 | MtrunA17_Chr2g0319581 | 27.273 | 418 | 253 | 18 | 43 | 419 | 226 | 633 | 1.48e-29 | 122 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0250450 | AT5G15630.1 | 73.183 | 399 | 103 | 2 | 33 | 431 | 18 | 412 | 0.0 | 647 |
| Msa0250450 | AT5G15630.3 | 73.158 | 380 | 98 | 2 | 52 | 431 | 1 | 376 | 0.0 | 613 |
| Msa0250450 | AT5G15630.4 | 73.151 | 365 | 94 | 2 | 67 | 431 | 3 | 363 | 0.0 | 590 |
| Msa0250450 | AT5G15630.2 | 73.151 | 365 | 94 | 2 | 67 | 431 | 3 | 363 | 0.0 | 590 |
| Msa0250450 | AT5G60920.1 | 61.072 | 429 | 155 | 4 | 20 | 438 | 15 | 441 | 0.0 | 587 |
| Msa0250450 | AT3G02210.1 | 58.391 | 435 | 170 | 4 | 19 | 450 | 22 | 448 | 0.0 | 566 |
| Msa0250450 | AT5G60920.2 | 63.131 | 396 | 140 | 3 | 47 | 438 | 1 | 394 | 0.0 | 563 |
| Msa0250450 | AT3G29810.1 | 59.330 | 418 | 158 | 4 | 34 | 446 | 27 | 437 | 0.0 | 555 |
| Msa0250450 | AT5G15630.5 | 70.031 | 327 | 94 | 2 | 33 | 359 | 18 | 340 | 0.0 | 509 |
| Msa0250450 | AT1G09790.2 | 48.792 | 414 | 201 | 6 | 17 | 427 | 7 | 412 | 9.11e-142 | 413 |
| Msa0250450 | AT1G09790.1 | 47.765 | 425 | 200 | 7 | 17 | 427 | 7 | 423 | 3.96e-139 | 407 |
| Msa0250450 | AT5G60950.1 | 49.171 | 181 | 84 | 2 | 43 | 223 | 30 | 202 | 9.65e-58 | 189 |
| Msa0250450 | AT4G16120.1 | 28.673 | 422 | 247 | 19 | 43 | 418 | 217 | 630 | 2.32e-39 | 150 |
| Msa0250450 | AT5G49270.1 | 28.438 | 429 | 254 | 19 | 36 | 418 | 210 | 631 | 2.70e-38 | 147 |
| Msa0250450 | AT4G27110.1 | 27.253 | 455 | 277 | 18 | 43 | 451 | 219 | 665 | 1.64e-33 | 134 |
| Msa0250450 | AT3G16860.1 | 27.948 | 458 | 265 | 24 | 43 | 451 | 210 | 651 | 1.65e-32 | 130 |
| Msa0250450 | AT3G20580.1 | 28.289 | 456 | 261 | 21 | 43 | 449 | 229 | 667 | 3.70e-32 | 130 |
Find 116 sgRNAs with CRISPR-Local
Find 202 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCCCATATGATTTCTTTCT+TGG | 0.151399 | 2_2:+39146984 | None:intergenic |
| TCAACTTCAGGCATGGAATT+TGG | 0.180595 | 2_2:-39147924 | Msa0250450:exon |
| CCTAGAAGGGTATACTTTAA+TGG | 0.184050 | 2_2:-39144873 | Msa0250450:CDS |
| TATTTCCAGCAACCTCTTTC+AGG | 0.198489 | 2_2:+39145695 | None:intergenic |
| AAGATAATTATAAGGATTAT+TGG | 0.226624 | 2_2:-39145585 | Msa0250450:CDS |
| AACACAACAGCTTGGGTTCT+TGG | 0.235897 | 2_2:+39146177 | None:intergenic |
| GGTAGCCTTTGAGCAGAATT+TGG | 0.247873 | 2_2:+39144807 | None:intergenic |
| ATAACAATTTGGTGATTTCT+TGG | 0.256668 | 2_2:-39147951 | None:intergenic |
| CCATTAAAGTATACCCTTCT+AGG | 0.259971 | 2_2:+39144873 | None:intergenic |
| AACTGTCTTGTTAGTCCTTC+CGG | 0.267626 | 2_2:+39146747 | None:intergenic |
| TGGCGTGTGCATTGCAATAA+AGG | 0.319433 | 2_2:+39145640 | None:intergenic |
| ATTCTACAATGATTTAATAA+TGG | 0.323384 | 2_2:-39144982 | Msa0250450:CDS |
| GCATATAAAAGATAATTATA+AGG | 0.335357 | 2_2:-39145593 | Msa0250450:CDS |
| TTTCTTGGAACTTCAACTTC+AGG | 0.356954 | 2_2:-39147936 | Msa0250450:five_prime_UTR |
| GTGCATTGCAATAAAGGTTT+TGG | 0.357973 | 2_2:+39145646 | None:intergenic |
| GGGTAACATTACTGAGATTA+GGG | 0.358595 | 2_2:+39145491 | None:intergenic |
| TAATGGAAGCTGGGGCTAAA+GGG | 0.368160 | 2_2:-39144965 | Msa0250450:CDS |
| GATGACACAGGAATGTTCTA+TGG | 0.385600 | 2_2:-39145011 | Msa0250450:CDS |
| TGTTGCTTGCGCTCCCATCA+TGG | 0.386890 | 2_2:+39146963 | None:intergenic |
| ATGGACATCAGATGGTTATA+TGG | 0.392606 | 2_2:-39147652 | Msa0250450:intron |
| ATGAACCCGGGATGGACATT+AGG | 0.394711 | 2_2:-39147018 | Msa0250450:CDS |
| ATCCCGGGTTCATAATGTTT+CGG | 0.395348 | 2_2:+39147028 | None:intergenic |
| AGGTGGTGTGCTAACATCTT+GGG | 0.396771 | 2_2:-39146821 | Msa0250450:CDS |
| TGGGTAACATTACTGAGATT+AGG | 0.404033 | 2_2:+39145490 | None:intergenic |
| TTTGATCCATTGGATCCAAC+TGG | 0.408485 | 2_2:-39147705 | Msa0250450:CDS |
| CAAGTAGTTGACTTATTACC+TGG | 0.416180 | 2_2:-39146880 | Msa0250450:CDS |
| GGGCCAAGAAAGAAATCATA+TGG | 0.421488 | 2_2:-39146987 | Msa0250450:CDS |
| TGAGCAGAATTTGGCAAGAA+AGG | 0.426117 | 2_2:+39144816 | None:intergenic |
| TAGAATGAATTACACACAAT+GGG | 0.426364 | 2_2:-39145530 | Msa0250450:CDS |
| ATATGCCAATGCACACGAAC+AGG | 0.426620 | 2_2:+39145610 | None:intergenic |
| ATAATGGAAGCTGGGGCTAA+AGG | 0.427586 | 2_2:-39144966 | Msa0250450:CDS |
| TCTTGGGGACAGGACCCTTC+AGG | 0.429022 | 2_2:-39146805 | Msa0250450:CDS |
| AACTTACTTATGGCTTCATA+AGG | 0.429069 | 2_2:+39145436 | None:intergenic |
| GGCAAGAAAGGGTATGAATC+AGG | 0.435645 | 2_2:+39144828 | None:intergenic |
| TGTAGAGGCATTTGATCCAT+TGG | 0.442199 | 2_2:-39147715 | Msa0250450:intron |
| AATGATTTAATAATGGAAGC+TGG | 0.446216 | 2_2:-39144975 | Msa0250450:CDS |
| TCTGTAAGAATAACAGTTGA+AGG | 0.452263 | 2_2:+39146655 | None:intergenic |
| AAGATCCTGAAAGAGGTTGC+TGG | 0.460769 | 2_2:-39145700 | Msa0250450:CDS |
| AAATTGCTTGGACCGGGAGC+AGG | 0.463331 | 2_2:-39146706 | Msa0250450:CDS |
| GAGCAGAATTTGGCAAGAAA+GGG | 0.471958 | 2_2:+39144817 | None:intergenic |
| AGAAATCATATGGGCCATGA+TGG | 0.480849 | 2_2:-39146977 | Msa0250450:CDS |
| ATGATTTAATAATGGAAGCT+GGG | 0.480905 | 2_2:-39144974 | Msa0250450:CDS |
| ATAAAGAAACACAACAGCTT+GGG | 0.481011 | 2_2:+39146170 | None:intergenic |
| GTCCATCCTAATGTCCATCC+CGG | 0.482281 | 2_2:+39147012 | None:intergenic |
| TTTGTCCTGTTCGTGTGCAT+TGG | 0.488987 | 2_2:-39145615 | Msa0250450:CDS |
| TGCAATCTCGGCATTTCAGA+TGG | 0.490026 | 2_2:-39146782 | Msa0250450:CDS |
| GGACTTCTCTTGCAACTATG+AGG | 0.491344 | 2_2:+39146904 | None:intergenic |
| TCAGGCATGGAATTTGGTAA+TGG | 0.494974 | 2_2:-39147918 | Msa0250450:exon |
| ATAAGTACATGTCACATTCC+AGG | 0.497470 | 2_2:+39146216 | None:intergenic |
| GATAAAGAAACACAACAGCT+TGG | 0.498328 | 2_2:+39146169 | None:intergenic |
| AGCAGGATATTCATGTGGTC+CGG | 0.500729 | 2_2:-39146689 | Msa0250450:CDS |
| ACATTCCCAGTTGGATCCAA+TGG | 0.502942 | 2_2:+39147699 | None:intergenic |
| CTGGGAATGTGACAATAAGA+TGG | 0.503167 | 2_2:-39147686 | Msa0250450:CDS |
| GGACCCTTCAGGTGCAATCT+CGG | 0.506260 | 2_2:-39146794 | Msa0250450:CDS |
| TGGAACTTCAACTTCAGGCA+TGG | 0.508911 | 2_2:-39147931 | Msa0250450:exon |
| CAAGACAGTTAAACTACCTC+AGG | 0.509450 | 2_2:-39146734 | Msa0250450:CDS |
| CAGATGGGTGTAGGACTCTC+CGG | 0.515620 | 2_2:-39146766 | Msa0250450:CDS |
| ATCTGAGGTGCTTATGAAGA+AGG | 0.516290 | 2_2:-39144934 | Msa0250450:CDS |
| AAGGTGGTGTGCTAACATCT+TGG | 0.517435 | 2_2:-39146822 | Msa0250450:CDS |
| GTCATCATTACAACACTTGT+AGG | 0.519462 | 2_2:+39144786 | None:intergenic |
| CATTTACACTAAAGCAAGGA+TGG | 0.523081 | 2_2:-39144902 | Msa0250450:CDS |
| ACAACAGCTTGGGTTCTTGG+AGG | 0.528958 | 2_2:+39146180 | None:intergenic |
| CTTATTGTCACATTCCCAGT+TGG | 0.532085 | 2_2:+39147690 | None:intergenic |
| TGTATTCAAAACTATAGACT+TGG | 0.537143 | 2_2:+39145470 | None:intergenic |
| GCTTGTCCAACTTGTGCTTG+TGG | 0.548007 | 2_2:-39146121 | Msa0250450:CDS |
| GGTAATAAGTCAACTACTTG+AGG | 0.550335 | 2_2:+39146883 | None:intergenic |
| CTCATTCTTATATCTCCAGC+TGG | 0.550563 | 2_2:-39147834 | Msa0250450:intron |
| TCTTGCCAAATTCTGCTCAA+AGG | 0.554568 | 2_2:-39144812 | Msa0250450:CDS |
| TACATTTAGAGAGCTGAAGT+TGG | 0.560296 | 2_2:-39147877 | Msa0250450:CDS |
| AAATGATGCAATAATCACAT+AGG | 0.564180 | 2_2:+39144761 | None:intergenic |
| TGCATATTGTAAGATGCTCC+AGG | 0.567353 | 2_2:+39146862 | None:intergenic |
| GAAATCATATGGGCCATGAT+GGG | 0.570678 | 2_2:-39146976 | Msa0250450:CDS |
| TGTGCTAACATCTTGGGGAC+AGG | 0.571959 | 2_2:-39146815 | Msa0250450:CDS |
| TACACAAACTGTTGCAAAGG+TGG | 0.573020 | 2_2:-39146838 | Msa0250450:CDS |
| ATGCCGAGATTGCACCTGAA+GGG | 0.577152 | 2_2:+39146791 | None:intergenic |
| TTGCTGGAAATAACAAGACT+AGG | 0.578763 | 2_2:-39145684 | Msa0250450:CDS |
| CCACATGAATATCCTGCTCC+CGG | 0.579683 | 2_2:+39146694 | None:intergenic |
| GTTGAAGGAACTCTCTTAGC+CGG | 0.580085 | 2_2:+39146670 | None:intergenic |
| GGAGCGCAAGCAACAGAACA+AGG | 0.580360 | 2_2:-39146955 | Msa0250450:CDS |
| CAATACACAAACTGTTGCAA+AGG | 0.581528 | 2_2:-39146841 | Msa0250450:CDS |
| TCGGCATTTCAGATGGGTGT+AGG | 0.583929 | 2_2:-39146775 | Msa0250450:CDS |
| TGATTTAATAATGGAAGCTG+GGG | 0.584574 | 2_2:-39144973 | Msa0250450:CDS |
| TGACAACCACAAGCACAAGT+TGG | 0.585659 | 2_2:+39146115 | None:intergenic |
| TGGGAATGTGACAATAAGAT+GGG | 0.590389 | 2_2:-39147685 | Msa0250450:CDS |
| ATGGCTTCATAAGGAAGAAG+TGG | 0.591100 | 2_2:+39145445 | None:intergenic |
| TCCATCCTAATGTCCATCCC+GGG | 0.595187 | 2_2:+39147013 | None:intergenic |
| AGATTCAAAGATCCTGAAAG+AGG | 0.596172 | 2_2:-39145707 | Msa0250450:CDS |
| AAGTTGGACAAGCTGTGACT+TGG | 0.597255 | 2_2:+39146131 | None:intergenic |
| AATGCCGAGATTGCACCTGA+AGG | 0.597959 | 2_2:+39146790 | None:intergenic |
| AAAGGGTATGAATCAGGAGG+TGG | 0.602047 | 2_2:+39144834 | None:intergenic |
| GGCCAAGAAAGAAATCATAT+GGG | 0.602816 | 2_2:-39146986 | Msa0250450:CDS |
| ATTATGTCATGGACATCAGA+TGG | 0.603721 | 2_2:-39147660 | Msa0250450:CDS |
| GATGGACATTAGGATGGACA+TGG | 0.605342 | 2_2:-39147008 | Msa0250450:CDS |
| GTATTCAAAACTATAGACTT+GGG | 0.605359 | 2_2:+39145471 | None:intergenic |
| AACACATTTACACTAAAGCA+AGG | 0.605862 | 2_2:-39144906 | Msa0250450:CDS |
| ATACCGAAACATTATGAACC+CGG | 0.606089 | 2_2:-39147031 | Msa0250450:CDS |
| GCAATCTCGGCATTTCAGAT+GGG | 0.606491 | 2_2:-39146781 | Msa0250450:CDS |
| ACCCGGGATGGACATTAGGA+TGG | 0.607366 | 2_2:-39147014 | Msa0250450:CDS |
| TACCGAAACATTATGAACCC+GGG | 0.608883 | 2_2:-39147030 | Msa0250450:CDS |
| ATTTACACTAAAGCAAGGAT+GGG | 0.609581 | 2_2:-39144901 | Msa0250450:CDS |
| TTATTCTTACAGATGATCGT+AGG | 0.609804 | 2_2:-39146645 | Msa0250450:CDS |
| TTGATCCATTGGATCCAACT+GGG | 0.610985 | 2_2:-39147704 | Msa0250450:CDS |
| GAAACATTATGAACCCGGGA+TGG | 0.613102 | 2_2:-39147026 | Msa0250450:CDS |
| TAAGATGGGATATTATGTCA+TGG | 0.615769 | 2_2:-39147671 | Msa0250450:CDS |
| GGTGGTGTGCTAACATCTTG+GGG | 0.624710 | 2_2:-39146820 | Msa0250450:CDS |
| ATAGAATGAATTACACACAA+TGG | 0.628977 | 2_2:-39145531 | Msa0250450:CDS |
| TAAAGGGAATGTGCAATCTG+AGG | 0.631122 | 2_2:-39144949 | Msa0250450:CDS |
| CCAAGCAATTTAAAATCCTG+AGG | 0.636131 | 2_2:+39146718 | None:intergenic |
| TGGGTGTAGGACTCTCCGGA+AGG | 0.662739 | 2_2:-39146762 | Msa0250450:CDS |
| AATGCACACGAACAGGACAA+AGG | 0.669891 | 2_2:+39145617 | None:intergenic |
| CCGGGAGCAGGATATTCATG+TGG | 0.685860 | 2_2:-39146694 | Msa0250450:CDS |
| GCACACGAACAGGACAAAGG+TGG | 0.685930 | 2_2:+39145620 | None:intergenic |
| AAGAAAGGGTATGAATCAGG+AGG | 0.687329 | 2_2:+39144831 | None:intergenic |
| ATGGACATTAGGATGGACAT+GGG | 0.698791 | 2_2:-39147007 | Msa0250450:CDS |
| AGAATGAATTACACACAATG+GGG | 0.725776 | 2_2:-39145529 | Msa0250450:CDS |
| ATTGTGTATGCAGATGACAC+AGG | 0.753079 | 2_2:-39145023 | Msa0250450:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTGATAATTTTATTCTTT+TGG | + | chr2_2:39145192-39145211 | None:intergenic | 10.0% |
| !! | AAATAATGTTATAACTTATA+AGG | + | chr2_2:39146914-39146933 | None:intergenic | 10.0% |
| !! | TTATAAGTTATAACATTATT+TGG | - | chr2_2:39146913-39146932 | Msa0250450:CDS | 10.0% |
| !! | GCATATAAAAGATAATTATA+AGG | - | chr2_2:39147095-39147114 | Msa0250450:intron | 15.0% |
| !! | AAGATAATTATAAGGATTAT+TGG | - | chr2_2:39147103-39147122 | Msa0250450:intron | 15.0% |
| !! | ATTCTACAATGATTTAATAA+TGG | - | chr2_2:39147706-39147725 | Msa0250450:CDS | 15.0% |
| !! | TTGCATATATGAAAAAACAT+AGG | - | chr2_2:39144886-39144905 | Msa0250450:CDS | 20.0% |
| !!! | ATTTTATTTTATGCTTGTAG+AGG | - | chr2_2:39144958-39144977 | Msa0250450:CDS | 20.0% |
| !!! | TTATTATGTGTTACTATATC+AGG | + | chr2_2:39145322-39145341 | None:intergenic | 20.0% |
| !! | TTAATATTCGCATAATAACA+CGG | - | chr2_2:39145369-39145388 | Msa0250450:intron | 20.0% |
| !!! | CGAAAAACATATTTTCAAAA+TGG | - | chr2_2:39145455-39145474 | Msa0250450:CDS | 20.0% |
| !! | TATTAGATAATACTATTTCC+AGG | + | chr2_2:39146334-39146353 | None:intergenic | 20.0% |
| !! | TAATAGTACATTTGTATTCA+AGG | + | chr2_2:39146412-39146431 | None:intergenic | 20.0% |
| !!! | AAGACTAATAATCATGATTT+TGG | + | chr2_2:39146804-39146823 | None:intergenic | 20.0% |
| !! | ATATTTGAAGAACTTACTTA+TGG | + | chr2_2:39147265-39147284 | None:intergenic | 20.0% |
| !! | TCAAGTAAACAAAATATAGA+CGG | + | chr2_2:39147294-39147313 | None:intergenic | 20.0% |
| !!! | AAATAAATTGGCTTGAAATT+TGG | + | chr2_2:39147459-39147478 | None:intergenic | 20.0% |
| !! | ATAGGGATATTATATGTATT+TGG | + | chr2_2:39147590-39147609 | None:intergenic | 20.0% |
| !!! | TTATTGCATCATTTTTCATT+TGG | - | chr2_2:39147936-39147955 | Msa0250450:five_prime_UTR | 20.0% |
| !!! | CATCATTTTTGGAAACATTT+TGG | + | chr2_2:39145146-39145165 | None:intergenic | 25.0% |
| ! | CTAGAAAAGGATTTGAATAA+TGG | - | chr2_2:39145280-39145299 | Msa0250450:intron | 25.0% |
| ! | AGTAACTGAGATTCATTTAA+AGG | + | chr2_2:39145486-39145505 | None:intergenic | 25.0% |
| !! | GATACTATGATGTCAAATTT+TGG | - | chr2_2:39145602-39145621 | Msa0250450:CDS | 25.0% |
| ! | CTATTTGCAATATACTCAAA+GGG | + | chr2_2:39146103-39146122 | None:intergenic | 25.0% |
| ! | ACTATTTGCAATATACTCAA+AGG | + | chr2_2:39146104-39146123 | None:intergenic | 25.0% |
| ! | GAGTATATTGCAAATAGTTA+TGG | - | chr2_2:39146106-39146125 | Msa0250450:CDS | 25.0% |
| ! | TAATGTGGAAGTAGAAATTA+AGG | + | chr2_2:39146628-39146647 | None:intergenic | 25.0% |
| ! | TTAAAAGTTGGCTAATAATG+TGG | + | chr2_2:39146643-39146662 | None:intergenic | 25.0% |
| ! | GTTGCATCATAATCATTTAT+AGG | - | chr2_2:39146675-39146694 | Msa0250450:CDS | 25.0% |
| ! | GAAATTCAGTCAAATACAAT+TGG | - | chr2_2:39146702-39146721 | Msa0250450:CDS | 25.0% |
| !! | AATAATCATGATTTTGGACA+CGG | + | chr2_2:39146798-39146817 | None:intergenic | 25.0% |
| !!! | GATTATTAGTCTTAACCATA+TGG | - | chr2_2:39146811-39146830 | Msa0250450:CDS | 25.0% |
| !!! | CACAATATAAAAGGTTTTAG+AGG | + | chr2_2:39146858-39146877 | None:intergenic | 25.0% |
| !!! | CTCTAAAACCTTTTATATTG+TGG | - | chr2_2:39146856-39146875 | Msa0250450:CDS | 25.0% |
| ! | ATAGAATGAATTACACACAA+TGG | - | chr2_2:39147157-39147176 | Msa0250450:intron | 25.0% |
| ! | TAGAATGAATTACACACAAT+GGG | - | chr2_2:39147158-39147177 | Msa0250450:intron | 25.0% |
| ! | GTATTCAAAACTATAGACTT+GGG | + | chr2_2:39147220-39147239 | None:intergenic | 25.0% |
| ! | TGTATTCAAAACTATAGACT+TGG | + | chr2_2:39147221-39147240 | None:intergenic | 25.0% |
| ! | TTGGATTGTACGATATTAAT+CGG | + | chr2_2:39147440-39147459 | None:intergenic | 25.0% |
| !!! | GTTTTTTTAACTTTTGTGCA+TGG | - | chr2_2:39147638-39147657 | Msa0250450:intron | 25.0% |
| !! | AATGATTTAATAATGGAAGC+TGG | - | chr2_2:39147713-39147732 | Msa0250450:CDS | 25.0% |
| !! | ATGATTTAATAATGGAAGCT+GGG | - | chr2_2:39147714-39147733 | Msa0250450:intron | 25.0% |
| ! | AAATGATGCAATAATCACAT+AGG | + | chr2_2:39147930-39147949 | None:intergenic | 25.0% |
| TAAGATGGGATATTATGTCA+TGG | - | chr2_2:39145017-39145036 | Msa0250450:intron | 30.0% | |
| ! | CTGATCATGCTATTCTTTTA+AGG | - | chr2_2:39145080-39145099 | Msa0250450:intron | 30.0% |
| TCCAAAAATGATGAAATCAC+TGG | - | chr2_2:39145153-39145172 | Msa0250450:intron | 30.0% | |
| ! | ACCAGTGATTTCATCATTTT+TGG | + | chr2_2:39145157-39145176 | None:intergenic | 30.0% |
| GAAAAGGATTTGAATAATGG+TGG | - | chr2_2:39145283-39145302 | Msa0250450:intron | 30.0% | |
| TCTGTAAGAATAACAGTTGA+AGG | + | chr2_2:39146036-39146055 | None:intergenic | 30.0% | |
| TTATTCTTACAGATGATCGT+AGG | - | chr2_2:39146043-39146062 | Msa0250450:intron | 30.0% | |
| TTTAATACTGCCGAGAATTA+TGG | - | chr2_2:39146168-39146187 | Msa0250450:CDS | 30.0% | |
| CTACATTTGACCATAATTCT+CGG | + | chr2_2:39146181-39146200 | None:intergenic | 30.0% | |
| ACTGCATAGGAAAAAAATAC+AGG | + | chr2_2:39146450-39146469 | None:intergenic | 30.0% | |
| ATAAAGAAACACAACAGCTT+GGG | + | chr2_2:39146521-39146540 | None:intergenic | 30.0% | |
| ATTTGTCATTATGCAAATGC+AGG | - | chr2_2:39146956-39146975 | Msa0250450:CDS | 30.0% | |
| AGAATGAATTACACACAATG+GGG | - | chr2_2:39147159-39147178 | Msa0250450:intron | 30.0% | |
| AACTTACTTATGGCTTCATA+AGG | + | chr2_2:39147255-39147274 | None:intergenic | 30.0% | |
| TGACGTCTCTAATACAAATT+CGG | - | chr2_2:39147364-39147383 | Msa0250450:intron | 30.0% | |
| AAAATACCAAGCTTGAAATC+TGG | - | chr2_2:39147492-39147511 | Msa0250450:intron | 30.0% | |
| ! | GTTGTCTTATTAAGATCAGA+CGG | + | chr2_2:39147519-39147538 | None:intergenic | 30.0% |
| ATGTGACTCTATGCATTATA+GGG | + | chr2_2:39147607-39147626 | None:intergenic | 30.0% | |
| ! | TGATTTAATAATGGAAGCTG+GGG | - | chr2_2:39147715-39147734 | Msa0250450:intron | 30.0% |
| AACACATTTACACTAAAGCA+AGG | - | chr2_2:39147782-39147801 | Msa0250450:intron | 30.0% | |
| ATTTACACTAAAGCAAGGAT+GGG | - | chr2_2:39147787-39147806 | Msa0250450:intron | 30.0% | |
| TTTCTTGGAACTTCAACTTC+AGG | - | chr2_2:39144752-39144771 | Msa0250450:CDS | 35.0% | |
| TACATTTAGAGAGCTGAAGT+TGG | - | chr2_2:39144811-39144830 | Msa0250450:CDS | 35.0% | |
| ATGCAAAGTAATTTACCAGC+TGG | + | chr2_2:39144872-39144891 | None:intergenic | 35.0% | |
| TGGGAATGTGACAATAAGAT+GGG | - | chr2_2:39145003-39145022 | Msa0250450:CDS | 35.0% | |
| ATTATGTCATGGACATCAGA+TGG | - | chr2_2:39145028-39145047 | Msa0250450:intron | 35.0% | |
| ATGGACATCAGATGGTTATA+TGG | - | chr2_2:39145036-39145055 | Msa0250450:intron | 35.0% | |
| TAGCATGATCAGACAAAGTT+TGG | + | chr2_2:39145072-39145091 | None:intergenic | 35.0% | |
| TAGATTCGAGAAGCTAGAAA+AGG | - | chr2_2:39145267-39145286 | Msa0250450:intron | 35.0% | |
| GTGTAACACACATAGATGTT+TGG | - | chr2_2:39145391-39145410 | Msa0250450:intron | 35.0% | |
| !! | ATATGTTTTTCGATACGCAC+TGG | + | chr2_2:39145447-39145466 | None:intergenic | 35.0% |
| AATGAATCTCAGTTACTTCG+AGG | - | chr2_2:39145489-39145508 | Msa0250450:CDS | 35.0% | |
| ATGAATCTCAGTTACTTCGA+GGG | - | chr2_2:39145490-39145509 | Msa0250450:CDS | 35.0% | |
| TTAATCTCCACAATTACACG+TGG | - | chr2_2:39145514-39145533 | Msa0250450:CDS | 35.0% | |
| !! | CTATGATGTCAAATTTTGGC+AGG | - | chr2_2:39145606-39145625 | Msa0250450:CDS | 35.0% |
| ATACCGAAACATTATGAACC+CGG | - | chr2_2:39145657-39145676 | Msa0250450:CDS | 35.0% | |
| GGCCAAGAAAGAAATCATAT+GGG | - | chr2_2:39145702-39145721 | Msa0250450:CDS | 35.0% | |
| GGTAATAAGTCAACTACTTG+AGG | + | chr2_2:39145808-39145827 | None:intergenic | 35.0% | |
| ! | CAAGTAGTTGACTTATTACC+TGG | - | chr2_2:39145808-39145827 | Msa0250450:intron | 35.0% |
| CAATACACAAACTGTTGCAA+AGG | - | chr2_2:39145847-39145866 | Msa0250450:intron | 35.0% | |
| ! | CCAAGCAATTTAAAATCCTG+AGG | + | chr2_2:39145973-39145992 | None:intergenic | 35.0% |
| ! | CCTCAGGATTTTAAATTGCT+TGG | - | chr2_2:39145970-39145989 | Msa0250450:intron | 35.0% |
| ! | GGATTTTAAATTGCTTGGAC+CGG | - | chr2_2:39145975-39145994 | Msa0250450:intron | 35.0% |
| ! | GATTTTAAATTGCTTGGACC+GGG | - | chr2_2:39145976-39145995 | Msa0250450:intron | 35.0% |
| AGGATCTGCAATTACAATCA+AGG | + | chr2_2:39146266-39146285 | None:intergenic | 35.0% | |
| ! | ATCCTTTTCGAAAACCTTGA+TGG | - | chr2_2:39146281-39146300 | Msa0250450:intron | 35.0% |
| ! | AACCATCAAGGTTTTCGAAA+AGG | + | chr2_2:39146286-39146305 | None:intergenic | 35.0% |
| ATAAGTACATGTCACATTCC+AGG | + | chr2_2:39146475-39146494 | None:intergenic | 35.0% | |
| GATAAAGAAACACAACAGCT+TGG | + | chr2_2:39146522-39146541 | None:intergenic | 35.0% | |
| AGATTCAAAGATCCTGAAAG+AGG | - | chr2_2:39146981-39147000 | Msa0250450:CDS | 35.0% | |
| TTGCTGGAAATAACAAGACT+AGG | - | chr2_2:39147004-39147023 | Msa0250450:CDS | 35.0% | |
| ! | GTGCATTGCAATAAAGGTTT+TGG | + | chr2_2:39147045-39147064 | None:intergenic | 35.0% |
| GGGTAACATTACTGAGATTA+GGG | + | chr2_2:39147200-39147219 | None:intergenic | 35.0% | |
| TGGGTAACATTACTGAGATT+AGG | + | chr2_2:39147201-39147220 | None:intergenic | 35.0% | |
| CATTGCAATCAACATGTTTG+TGG | - | chr2_2:39147410-39147429 | Msa0250450:intron | 35.0% | |
| CATGTGACTCTATGCATTAT+AGG | + | chr2_2:39147608-39147627 | None:intergenic | 35.0% | |
| CATTTACACTAAAGCAAGGA+TGG | - | chr2_2:39147786-39147805 | Msa0250450:intron | 35.0% | |
| CCATTAAAGTATACCCTTCT+AGG | + | chr2_2:39147818-39147837 | None:intergenic | 35.0% | |
| ! | CCTAGAAGGGTATACTTTAA+TGG | - | chr2_2:39147815-39147834 | Msa0250450:intron | 35.0% |
| GTCATCATTACAACACTTGT+AGG | + | chr2_2:39147905-39147924 | None:intergenic | 35.0% | |
| TCAACTTCAGGCATGGAATT+TGG | - | chr2_2:39144764-39144783 | Msa0250450:CDS | 40.0% | |
| TCAGGCATGGAATTTGGTAA+TGG | - | chr2_2:39144770-39144789 | Msa0250450:CDS | 40.0% | |
| CTCATTCTTATATCTCCAGC+TGG | - | chr2_2:39144854-39144873 | Msa0250450:CDS | 40.0% | |
| !! | TGTAGAGGCATTTGATCCAT+TGG | - | chr2_2:39144973-39144992 | Msa0250450:CDS | 40.0% |
| TTTGATCCATTGGATCCAAC+TGG | - | chr2_2:39144983-39145002 | Msa0250450:CDS | 40.0% | |
| TTGATCCATTGGATCCAACT+GGG | - | chr2_2:39144984-39145003 | Msa0250450:CDS | 40.0% | |
| CTTATTGTCACATTCCCAGT+TGG | + | chr2_2:39145001-39145020 | None:intergenic | 40.0% | |
| CTGGGAATGTGACAATAAGA+TGG | - | chr2_2:39145002-39145021 | Msa0250450:CDS | 40.0% | |
| TGTTTGGATCCCTTAACCAT+AGG | - | chr2_2:39145407-39145426 | Msa0250450:intron | 40.0% | |
| ACACGAACTCCTATGGTTAA+GGG | + | chr2_2:39145419-39145438 | None:intergenic | 40.0% | |
| TGAATCTCAGTTACTTCGAG+GGG | - | chr2_2:39145491-39145510 | Msa0250450:CDS | 40.0% | |
| CTATCATCCACGTGTAATTG+TGG | + | chr2_2:39145524-39145543 | None:intergenic | 40.0% | |
| TACCGAAACATTATGAACCC+GGG | - | chr2_2:39145658-39145677 | Msa0250450:CDS | 40.0% | |
| ATCCCGGGTTCATAATGTTT+CGG | + | chr2_2:39145663-39145682 | None:intergenic | 40.0% | |
| ATGGACATTAGGATGGACAT+GGG | - | chr2_2:39145681-39145700 | Msa0250450:CDS | 40.0% | |
| GGGCCAAGAAAGAAATCATA+TGG | - | chr2_2:39145701-39145720 | Msa0250450:CDS | 40.0% | |
| GGCCCATATGATTTCTTTCT+TGG | + | chr2_2:39145707-39145726 | None:intergenic | 40.0% | |
| AGAAATCATATGGGCCATGA+TGG | - | chr2_2:39145711-39145730 | Msa0250450:CDS | 40.0% | |
| GAAATCATATGGGCCATGAT+GGG | - | chr2_2:39145712-39145731 | Msa0250450:CDS | 40.0% | |
| TGCATATTGTAAGATGCTCC+AGG | + | chr2_2:39145829-39145848 | None:intergenic | 40.0% | |
| TACACAAACTGTTGCAAAGG+TGG | - | chr2_2:39145850-39145869 | Msa0250450:intron | 40.0% | |
| ! | AACTGTCTTGTTAGTCCTTC+CGG | + | chr2_2:39145944-39145963 | None:intergenic | 40.0% |
| CAAGACAGTTAAACTACCTC+AGG | - | chr2_2:39145954-39145973 | Msa0250450:intron | 40.0% | |
| !! | AGCGTTGATTGTAACCATCA+AGG | + | chr2_2:39146298-39146317 | None:intergenic | 40.0% |
| !! | ACGCTTTAAAGAAACTGTCC+TGG | - | chr2_2:39146313-39146332 | Msa0250450:intron | 40.0% |
| !!! | TTTTTTCCTATGCAGTGTCC+TGG | - | chr2_2:39146454-39146473 | Msa0250450:intron | 40.0% |
| CTCGACAGCAGTTTAAAAGT+TGG | + | chr2_2:39146655-39146674 | None:intergenic | 40.0% | |
| ! | CAACTTTTAAACTGCTGTCG+AGG | - | chr2_2:39146653-39146672 | Msa0250450:CDS | 40.0% |
| TAACTGCTATTGCAGCCATA+TGG | + | chr2_2:39146829-39146848 | None:intergenic | 40.0% | |
| AACTGCGGCCACAATATAAA+AGG | + | chr2_2:39146867-39146886 | None:intergenic | 40.0% | |
| TATTTCCAGCAACCTCTTTC+AGG | + | chr2_2:39146996-39147015 | None:intergenic | 40.0% | |
| ATGGCTTCATAAGGAAGAAG+TGG | + | chr2_2:39147246-39147265 | None:intergenic | 40.0% | |
| TTCATACAGTGGCACATATG+TGG | + | chr2_2:39147541-39147560 | None:intergenic | 40.0% | |
| AATTGCACGCATTCATACAG+TGG | + | chr2_2:39147552-39147571 | None:intergenic | 40.0% | |
| ATTGTGTATGCAGATGACAC+AGG | - | chr2_2:39147665-39147684 | Msa0250450:CDS | 40.0% | |
| GATGACACAGGAATGTTCTA+TGG | - | chr2_2:39147677-39147696 | Msa0250450:CDS | 40.0% | |
| TAAAGGGAATGTGCAATCTG+AGG | - | chr2_2:39147739-39147758 | Msa0250450:intron | 40.0% | |
| ! | ATCTGAGGTGCTTATGAAGA+AGG | - | chr2_2:39147754-39147773 | Msa0250450:intron | 40.0% |
| ! | AAGAAAGGGTATGAATCAGG+AGG | + | chr2_2:39147860-39147879 | None:intergenic | 40.0% |
| GAGCAGAATTTGGCAAGAAA+GGG | + | chr2_2:39147874-39147893 | None:intergenic | 40.0% | |
| TGAGCAGAATTTGGCAAGAA+AGG | + | chr2_2:39147875-39147894 | None:intergenic | 40.0% | |
| TCTTGCCAAATTCTGCTCAA+AGG | - | chr2_2:39147876-39147895 | Msa0250450:CDS | 40.0% | |
| TGGAACTTCAACTTCAGGCA+TGG | - | chr2_2:39144757-39144776 | Msa0250450:CDS | 45.0% | |
| ACATTCCCAGTTGGATCCAA+TGG | + | chr2_2:39144992-39145011 | None:intergenic | 45.0% | |
| GACACGAACTCCTATGGTTA+AGG | + | chr2_2:39145420-39145439 | None:intergenic | 45.0% | |
| AACCATAGGAGTTCGTGTCA+TGG | - | chr2_2:39145421-39145440 | Msa0250450:intron | 45.0% | |
| GAAACATTATGAACCCGGGA+TGG | - | chr2_2:39145662-39145681 | Msa0250450:CDS | 45.0% | |
| GATGGACATTAGGATGGACA+TGG | - | chr2_2:39145680-39145699 | Msa0250450:CDS | 45.0% | |
| GGACTTCTCTTGCAACTATG+AGG | + | chr2_2:39145787-39145806 | None:intergenic | 45.0% | |
| AAGGTGGTGTGCTAACATCT+TGG | - | chr2_2:39145866-39145885 | Msa0250450:intron | 45.0% | |
| AGGTGGTGTGCTAACATCTT+GGG | - | chr2_2:39145867-39145886 | Msa0250450:intron | 45.0% | |
| TGCAATCTCGGCATTTCAGA+TGG | - | chr2_2:39145906-39145925 | Msa0250450:intron | 45.0% | |
| GCAATCTCGGCATTTCAGAT+GGG | - | chr2_2:39145907-39145926 | Msa0250450:intron | 45.0% | |
| AGCAGGATATTCATGTGGTC+CGG | - | chr2_2:39145999-39146018 | Msa0250450:intron | 45.0% | |
| GTTGAAGGAACTCTCTTAGC+CGG | + | chr2_2:39146021-39146040 | None:intergenic | 45.0% | |
| AACACAACAGCTTGGGTTCT+TGG | + | chr2_2:39146514-39146533 | None:intergenic | 45.0% | |
| AAGTTGGACAAGCTGTGACT+TGG | + | chr2_2:39146560-39146579 | None:intergenic | 45.0% | |
| TGACAACCACAAGCACAAGT+TGG | + | chr2_2:39146576-39146595 | None:intergenic | 45.0% | |
| AAGATCCTGAAAGAGGTTGC+TGG | - | chr2_2:39146988-39147007 | Msa0250450:CDS | 45.0% | |
| TGGCGTGTGCATTGCAATAA+AGG | + | chr2_2:39147051-39147070 | None:intergenic | 45.0% | |
| AATGCACACGAACAGGACAA+AGG | + | chr2_2:39147074-39147093 | None:intergenic | 45.0% | |
| TTTGTCCTGTTCGTGTGCAT+TGG | - | chr2_2:39147073-39147092 | Msa0250450:intron | 45.0% | |
| ATATGCCAATGCACACGAAC+AGG | + | chr2_2:39147081-39147100 | None:intergenic | 45.0% | |
| ! | ATAATGGAAGCTGGGGCTAA+AGG | - | chr2_2:39147722-39147741 | Msa0250450:intron | 45.0% |
| TAATGGAAGCTGGGGCTAAA+GGG | - | chr2_2:39147723-39147742 | Msa0250450:intron | 45.0% | |
| !! | AAGGATGGGCTTTTCCTAGA+AGG | - | chr2_2:39147801-39147820 | Msa0250450:intron | 45.0% |
| !! | AGGATGGGCTTTTCCTAGAA+GGG | - | chr2_2:39147802-39147821 | Msa0250450:intron | 45.0% |
| ! | AAAGGGTATGAATCAGGAGG+TGG | + | chr2_2:39147857-39147876 | None:intergenic | 45.0% |
| ! | GGCAAGAAAGGGTATGAATC+AGG | + | chr2_2:39147863-39147882 | None:intergenic | 45.0% |
| GGTAGCCTTTGAGCAGAATT+TGG | + | chr2_2:39147884-39147903 | None:intergenic | 45.0% | |
| !! | GATTAAAAAAATAAATAAAT+TGG | + | chr2_2:39147471-39147490 | None:intergenic | 5.0% |
| ATGAACCCGGGATGGACATT+AGG | - | chr2_2:39145670-39145689 | Msa0250450:CDS | 50.0% | |
| TCCATCCTAATGTCCATCCC+GGG | + | chr2_2:39145678-39145697 | None:intergenic | 50.0% | |
| GTCCATCCTAATGTCCATCC+CGG | + | chr2_2:39145679-39145698 | None:intergenic | 50.0% | |
| GGTGGTGTGCTAACATCTTG+GGG | - | chr2_2:39145868-39145887 | Msa0250450:intron | 50.0% | |
| TGTGCTAACATCTTGGGGAC+AGG | - | chr2_2:39145873-39145892 | Msa0250450:intron | 50.0% | |
| ATGCCGAGATTGCACCTGAA+GGG | + | chr2_2:39145900-39145919 | None:intergenic | 50.0% | |
| AATGCCGAGATTGCACCTGA+AGG | + | chr2_2:39145901-39145920 | None:intergenic | 50.0% | |
| TCGGCATTTCAGATGGGTGT+AGG | - | chr2_2:39145913-39145932 | Msa0250450:intron | 50.0% | |
| CCACATGAATATCCTGCTCC+CGG | + | chr2_2:39145997-39146016 | None:intergenic | 50.0% | |
| CTGCAATACGACTGAGACTG+AGG | + | chr2_2:39146213-39146232 | None:intergenic | 50.0% | |
| CACAAAGCGACGATCACTAC+AGG | - | chr2_2:39146380-39146399 | Msa0250450:intron | 50.0% | |
| CACATTCCAGGACACTGCAT+AGG | + | chr2_2:39146463-39146482 | None:intergenic | 50.0% | |
| ACAACAGCTTGGGTTCTTGG+AGG | + | chr2_2:39146511-39146530 | None:intergenic | 50.0% | |
| GCTTGTCCAACTTGTGCTTG+TGG | - | chr2_2:39146567-39146586 | Msa0250450:intron | 50.0% | |
| GACGGTCCAGATTTCAAGCT+TGG | + | chr2_2:39147501-39147520 | None:intergenic | 50.0% | |
| GGCCATGACACGAACTCCTA+TGG | + | chr2_2:39145426-39145445 | None:intergenic | 55.0% | |
| ACCCGGGATGGACATTAGGA+TGG | - | chr2_2:39145674-39145693 | Msa0250450:CDS | 55.0% | |
| ! | TGTTGCTTGCGCTCCCATCA+TGG | + | chr2_2:39145728-39145747 | None:intergenic | 55.0% |
| GGAGCGCAAGCAACAGAACA+AGG | - | chr2_2:39145733-39145752 | Msa0250450:intron | 55.0% | |
| GGACCCTTCAGGTGCAATCT+CGG | - | chr2_2:39145894-39145913 | Msa0250450:intron | 55.0% | |
| CAGATGGGTGTAGGACTCTC+CGG | - | chr2_2:39145922-39145941 | Msa0250450:intron | 55.0% | |
| AAATTGCTTGGACCGGGAGC+AGG | - | chr2_2:39145982-39146001 | Msa0250450:intron | 55.0% | |
| CCGGGAGCAGGATATTCATG+TGG | - | chr2_2:39145994-39146013 | Msa0250450:intron | 55.0% | |
| GCACACGAACAGGACAAAGG+TGG | + | chr2_2:39147071-39147090 | None:intergenic | 55.0% | |
| TCTTGGGGACAGGACCCTTC+AGG | - | chr2_2:39145883-39145902 | Msa0250450:intron | 60.0% | |
| TGGGTGTAGGACTCTCCGGA+AGG | - | chr2_2:39145926-39145945 | Msa0250450:intron | 60.0% | |
| GCGTCCTGTGACTGCAACTG+CGG | + | chr2_2:39146882-39146901 | None:intergenic | 60.0% | |
| GTGGCCGCAGTTGCAGTCAC+AGG | - | chr2_2:39146875-39146894 | Msa0250450:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 39144746 | 39147964 | 39144746 | ID=Msa0250450;Name=Msa0250450 |
| chr2_2 | mRNA | 39144746 | 39147964 | 39144746 | ID=Msa0250450-mRNA-1;Parent=Msa0250450;Name=Msa0250450-mRNA-1;_AED=0.12;_eAED=0.12;_QI=30|1|0.83|1|1|1|6|0|453 |
| chr2_2 | exon | 39144746 | 39145032 | 39144746 | ID=Msa0250450-mRNA-1:exon:12161;Parent=Msa0250450-mRNA-1 |
| chr2_2 | exon | 39145443 | 39145732 | 39145443 | ID=Msa0250450-mRNA-1:exon:12160;Parent=Msa0250450-mRNA-1 |
| chr2_2 | exon | 39146094 | 39146241 | 39146094 | ID=Msa0250450-mRNA-1:exon:12159;Parent=Msa0250450-mRNA-1 |
| chr2_2 | exon | 39146626 | 39147082 | 39146626 | ID=Msa0250450-mRNA-1:exon:12158;Parent=Msa0250450-mRNA-1 |
| chr2_2 | exon | 39147653 | 39147732 | 39147653 | ID=Msa0250450-mRNA-1:exon:12157;Parent=Msa0250450-mRNA-1 |
| chr2_2 | exon | 39147835 | 39147964 | 39147835 | ID=Msa0250450-mRNA-1:exon:12156;Parent=Msa0250450-mRNA-1 |
| chr2_2 | five_prime_UTR | 39147935 | 39147964 | 39147935 | ID=Msa0250450-mRNA-1:five_prime_utr;Parent=Msa0250450-mRNA-1 |
| chr2_2 | CDS | 39147835 | 39147934 | 39147835 | ID=Msa0250450-mRNA-1:cds;Parent=Msa0250450-mRNA-1 |
| chr2_2 | CDS | 39147653 | 39147732 | 39147653 | ID=Msa0250450-mRNA-1:cds;Parent=Msa0250450-mRNA-1 |
| chr2_2 | CDS | 39146626 | 39147082 | 39146626 | ID=Msa0250450-mRNA-1:cds;Parent=Msa0250450-mRNA-1 |
| chr2_2 | CDS | 39146094 | 39146241 | 39146094 | ID=Msa0250450-mRNA-1:cds;Parent=Msa0250450-mRNA-1 |
| chr2_2 | CDS | 39145443 | 39145732 | 39145443 | ID=Msa0250450-mRNA-1:cds;Parent=Msa0250450-mRNA-1 |
| chr2_2 | CDS | 39144746 | 39145032 | 39144746 | ID=Msa0250450-mRNA-1:cds;Parent=Msa0250450-mRNA-1 |
| Gene Sequence |
| Protein sequence |
