Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0327020 | XP_013464108.1 | 98.182 | 440 | 8 | 0 | 14 | 453 | 3 | 442 | 0.0 | 907 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0327020 | sp|Q9LFW3|COBL4_ARATH | 70.476 | 420 | 118 | 3 | 33 | 452 | 18 | 431 | 0.0 | 647 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0250450 | Msa0327020 | 0.925463 | 1.773587e-90 | -8.615850e-47 |
| Msa0263440 | Msa0327020 | 0.857228 | 1.883031e-62 | -8.615850e-47 |
| Msa0289060 | Msa0327020 | 0.893133 | 8.343055e-75 | -8.615850e-47 |
| Msa0289100 | Msa0327020 | 0.895023 | 1.419774e-75 | -8.615850e-47 |
| Msa0301030 | Msa0327020 | 0.874504 | 6.412893e-68 | -8.615850e-47 |
| Msa0314220 | Msa0327020 | 0.824931 | 6.175729e-54 | -8.615850e-47 |
| Msa0327020 | Msa0338580 | 0.805836 | 1.101381e-49 | -8.615850e-47 |
| Msa0327020 | Msa0485970 | 0.869013 | 4.253496e-66 | -8.615850e-47 |
| Msa0327020 | Msa0547390 | 0.841225 | 5.405200e-58 | -8.615850e-47 |
| Msa0327020 | Msa0564950 | 0.841982 | 3.413721e-58 | -8.615850e-47 |
| Msa0327020 | Msa0565260 | 0.864065 | 1.589831e-64 | -8.615850e-47 |
| Msa0327020 | Msa0580580 | 0.861032 | 1.363699e-63 | -8.615850e-47 |
| Msa0327020 | Msa0602110 | 0.844433 | 7.582032e-59 | -8.615850e-47 |
| Msa0327020 | Msa0618050 | 0.861650 | 8.836519e-64 | -8.615850e-47 |
| Msa0327020 | Msa0618600 | 0.870325 | 1.588737e-66 | -8.615850e-47 |
| Msa0327020 | Msa0643240 | 0.839680 | 1.370677e-57 | -8.615850e-47 |
| Msa0327020 | Msa0657380 | 0.834674 | 2.614122e-56 | -8.615850e-47 |
| Msa0327020 | Msa0682920 | 0.828771 | 7.469044e-55 | -8.615850e-47 |
| Msa0327020 | Msa0708510 | 0.885832 | 5.786731e-72 | -8.615850e-47 |
| Msa0327020 | Msa1035290 | 0.806624 | 7.514658e-50 | -8.615850e-47 |
| Msa0327020 | Msa1075380 | 0.841837 | 3.730290e-58 | -8.615850e-47 |
| Msa0327020 | Msa1116460 | 0.832888 | 7.308102e-56 | -8.615850e-47 |
| Msa0327020 | Msa1162860 | 0.826944 | 2.053721e-54 | -8.615850e-47 |
| Msa0327020 | Msa1199250 | 0.840478 | 8.486957e-58 | -8.615850e-47 |
| Msa0327020 | Msa1199260 | 0.802198 | 6.287416e-49 | -8.615850e-47 |
| Msa0327020 | Msa1252480 | 0.831581 | 1.538960e-55 | -8.615850e-47 |
| Msa0327020 | Msa1293220 | 0.823327 | 1.470297e-53 | -8.615850e-47 |
| Msa0327020 | Msa1421310 | 0.953062 | 6.254683e-111 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0327020 | MtrunA17_Chr2g0308371 | 98.182 | 440 | 8 | 0 | 14 | 453 | 3 | 442 | 0.0 | 907 |
| Msa0327020 | MtrunA17_Chr6g0455411 | 69.082 | 414 | 124 | 1 | 17 | 430 | 1 | 410 | 0.0 | 642 |
| Msa0327020 | MtrunA17_Chr7g0219931 | 66.434 | 429 | 137 | 2 | 17 | 445 | 1 | 422 | 0.0 | 636 |
| Msa0327020 | MtrunA17_Chr2g0308381 | 60.092 | 436 | 166 | 3 | 19 | 451 | 18 | 448 | 0.0 | 584 |
| Msa0327020 | MtrunA17_Chr7g0219921 | 59.540 | 435 | 165 | 4 | 25 | 453 | 17 | 446 | 0.0 | 574 |
| Msa0327020 | MtrunA17_Chr6g0455401 | 57.428 | 451 | 176 | 5 | 1 | 447 | 1 | 439 | 0.0 | 559 |
| Msa0327020 | MtrunA17_Chr6g0455391 | 57.855 | 401 | 154 | 4 | 33 | 429 | 25 | 414 | 2.32e-179 | 507 |
| Msa0327020 | MtrunA17_Chr2g0333731 | 50.714 | 420 | 196 | 4 | 34 | 446 | 27 | 442 | 6.73e-173 | 492 |
| Msa0327020 | MtrunA17_Chr3g0145441 | 40.233 | 430 | 239 | 9 | 27 | 444 | 32 | 455 | 1.05e-117 | 352 |
| Msa0327020 | MtrunA17_Chr2g0294901 | 28.998 | 469 | 272 | 22 | 30 | 451 | 197 | 651 | 4.80e-35 | 137 |
| Msa0327020 | MtrunA17_Chr4g0068011 | 28.416 | 461 | 269 | 21 | 4 | 418 | 173 | 618 | 1.22e-34 | 136 |
| Msa0327020 | MtrunA17_Chr5g0394101 | 28.266 | 421 | 245 | 18 | 43 | 418 | 26 | 434 | 7.15e-34 | 132 |
| Msa0327020 | MtrunA17_Chr2g0319581 | 27.273 | 418 | 253 | 18 | 43 | 419 | 226 | 633 | 1.67e-29 | 121 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0327020 | AT5G15630.1 | 70.476 | 420 | 118 | 3 | 33 | 452 | 18 | 431 | 0.0 | 647 |
| Msa0327020 | AT5G15630.3 | 70.324 | 401 | 113 | 3 | 52 | 452 | 1 | 395 | 0.0 | 612 |
| Msa0327020 | AT5G15630.4 | 70.207 | 386 | 109 | 3 | 67 | 452 | 3 | 382 | 0.0 | 589 |
| Msa0327020 | AT5G15630.2 | 70.207 | 386 | 109 | 3 | 67 | 452 | 3 | 382 | 0.0 | 589 |
| Msa0327020 | AT5G60920.1 | 61.305 | 429 | 154 | 4 | 20 | 438 | 15 | 441 | 0.0 | 589 |
| Msa0327020 | AT3G02210.1 | 58.391 | 435 | 170 | 4 | 19 | 450 | 22 | 448 | 0.0 | 566 |
| Msa0327020 | AT5G60920.2 | 63.384 | 396 | 139 | 3 | 47 | 438 | 1 | 394 | 0.0 | 563 |
| Msa0327020 | AT3G29810.1 | 59.569 | 418 | 157 | 4 | 34 | 446 | 27 | 437 | 0.0 | 557 |
| Msa0327020 | AT5G15630.5 | 69.725 | 327 | 95 | 2 | 33 | 359 | 18 | 340 | 2.13e-180 | 508 |
| Msa0327020 | AT1G09790.2 | 48.792 | 414 | 201 | 6 | 17 | 427 | 7 | 412 | 1.13e-141 | 413 |
| Msa0327020 | AT1G09790.1 | 47.765 | 425 | 200 | 7 | 17 | 427 | 7 | 423 | 6.46e-139 | 406 |
| Msa0327020 | AT5G60950.1 | 49.171 | 181 | 84 | 2 | 43 | 223 | 30 | 202 | 8.77e-58 | 189 |
| Msa0327020 | AT4G16120.1 | 28.673 | 422 | 247 | 19 | 43 | 418 | 217 | 630 | 1.97e-39 | 150 |
| Msa0327020 | AT5G49270.1 | 27.586 | 464 | 280 | 21 | 36 | 453 | 210 | 663 | 8.29e-39 | 149 |
| Msa0327020 | AT4G27110.1 | 27.473 | 455 | 276 | 18 | 43 | 451 | 219 | 665 | 4.30e-34 | 135 |
| Msa0327020 | AT3G16860.1 | 28.043 | 460 | 266 | 24 | 43 | 453 | 210 | 653 | 1.43e-32 | 131 |
| Msa0327020 | AT3G20580.1 | 28.043 | 460 | 265 | 21 | 43 | 453 | 229 | 671 | 4.34e-32 | 129 |
Find 116 sgRNAs with CRISPR-Local
Find 204 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCCCATATGATTTCTTTCT+TGG | 0.151399 | 2_4:-38466277 | None:intergenic |
| TCAACTTCAGGCATGGAATT+TGG | 0.180595 | 2_4:+38465324 | Msa0327020:exon |
| CCAAGAAGGGTATACTTTAA+TGG | 0.194580 | 2_4:+38468383 | Msa0327020:CDS |
| TATTTCCAGCAACCTCTTTC+AGG | 0.198489 | 2_4:-38467566 | None:intergenic |
| CCATTAAAGTATACCCTTCT+TGG | 0.215939 | 2_4:-38468383 | None:intergenic |
| AACACAACAGCTTGGGTTCT+TGG | 0.235897 | 2_4:-38467084 | None:intergenic |
| AAGACAATTATAAGGATTAT+TGG | 0.240557 | 2_4:+38467676 | Msa0327020:CDS |
| GGTAGCCTTTGAGCAGAATT+TGG | 0.247873 | 2_4:-38468449 | None:intergenic |
| ATAACAATTTGGTGATTTCT+TGG | 0.256668 | 2_4:+38465297 | None:intergenic |
| AACTGTCTTGTTAGTCCTTC+CGG | 0.267626 | 2_4:-38466514 | None:intergenic |
| TGGCGTGTGCATTGCAATAA+AGG | 0.319433 | 2_4:-38467621 | None:intergenic |
| AAATGATGCAATAATCAAAT+AGG | 0.319444 | 2_4:-38468495 | None:intergenic |
| ATTCTACAATGATTTAATAA+TGG | 0.323384 | 2_4:+38468274 | Msa0327020:CDS |
| GCATATAAAAGACAATTATA+AGG | 0.345227 | 2_4:+38467668 | Msa0327020:CDS |
| TTTCTTGGAACTTCAACTTC+AGG | 0.356954 | 2_4:+38465312 | Msa0327020:five_prime_UTR |
| GTGCATTGCAATAAAGGTTT+TGG | 0.357973 | 2_4:-38467615 | None:intergenic |
| GGGTAACATTACTGAGATTA+GGG | 0.358595 | 2_4:-38467770 | None:intergenic |
| TAATGGAAGCTGGGGCTAAA+GGG | 0.368160 | 2_4:+38468291 | Msa0327020:CDS |
| CAAGTTGTTGACTTATTACC+TGG | 0.372283 | 2_4:+38466381 | Msa0327020:CDS |
| GATGACACAGGAATGTTCTA+TGG | 0.385600 | 2_4:+38468245 | Msa0327020:intron |
| TGTTGCTTGCGCTCCCATCA+TGG | 0.386890 | 2_4:-38466298 | None:intergenic |
| ATGGACATCAGATGGTTATA+TGG | 0.392606 | 2_4:+38465606 | Msa0327020:CDS |
| ATGAACCCGGGATGGACATT+AGG | 0.394711 | 2_4:+38466243 | Msa0327020:CDS |
| ATCCCGGGTTCATAATGTTT+CGG | 0.395348 | 2_4:-38466233 | None:intergenic |
| AGGTGGTGTGCTAACATCTT+GGG | 0.396771 | 2_4:+38466440 | Msa0327020:CDS |
| TGGGTAACATTACTGAGATT+AGG | 0.404033 | 2_4:-38467771 | None:intergenic |
| TTTGATCCATTGGATCCAAC+TGG | 0.408485 | 2_4:+38465553 | Msa0327020:CDS |
| GGGCCAAGAAAGAAATCATA+TGG | 0.421488 | 2_4:+38466274 | Msa0327020:CDS |
| TAGACTTAATTACACACAAT+GGG | 0.421709 | 2_4:+38467731 | Msa0327020:CDS |
| TGAGCAGAATTTGGCAAGAA+AGG | 0.426117 | 2_4:-38468440 | None:intergenic |
| ATATGCCAATGCACACGAAC+AGG | 0.426620 | 2_4:-38467651 | None:intergenic |
| ATAATGGAAGCTGGGGCTAA+AGG | 0.427586 | 2_4:+38468290 | Msa0327020:CDS |
| TCTTGGGGACAGGACCCTTC+AGG | 0.429022 | 2_4:+38466456 | Msa0327020:CDS |
| AACTTACTTATGGCTTCATA+AGG | 0.429069 | 2_4:-38467825 | None:intergenic |
| GGCAAGAAAGGGTATGAATC+AGG | 0.435645 | 2_4:-38468428 | None:intergenic |
| TGTAGAGGCATTTGATCCAT+TGG | 0.442199 | 2_4:+38465543 | Msa0327020:intron |
| AATGATTTAATAATGGAAGC+TGG | 0.446216 | 2_4:+38468281 | Msa0327020:CDS |
| TCTGTAAGAATAACAGTTGA+AGG | 0.452263 | 2_4:-38466606 | None:intergenic |
| AAGATCCTGAAAGAGGTTGC+TGG | 0.460769 | 2_4:+38467561 | Msa0327020:CDS |
| AAATTGCTTGGACCGGGAGC+AGG | 0.463331 | 2_4:+38466555 | Msa0327020:CDS |
| GAGCAGAATTTGGCAAGAAA+GGG | 0.471958 | 2_4:-38468439 | None:intergenic |
| AGAAATCATATGGGCCATGA+TGG | 0.480849 | 2_4:+38466284 | Msa0327020:CDS |
| ATGATTTAATAATGGAAGCT+GGG | 0.480905 | 2_4:+38468282 | Msa0327020:CDS |
| ATAAAGAAACACAACAGCTT+GGG | 0.481011 | 2_4:-38467091 | None:intergenic |
| GTCCATCCTAATGTCCATCC+CGG | 0.482281 | 2_4:-38466249 | None:intergenic |
| TCTGTCCTGTTCGTGTGCAT+TGG | 0.486426 | 2_4:+38467646 | Msa0327020:CDS |
| TGCAATCTCGGCATTTCAGA+TGG | 0.490026 | 2_4:+38466479 | Msa0327020:CDS |
| GGACTTCTCTTGCAACTATG+AGG | 0.491344 | 2_4:-38466357 | None:intergenic |
| TCAGGCATGGAATTTGGTAA+TGG | 0.494974 | 2_4:+38465330 | Msa0327020:exon |
| CATTTACACTCAAGCAAGGA+TGG | 0.495829 | 2_4:+38468354 | Msa0327020:CDS |
| ATAAGTACATGTCACATTCC+AGG | 0.497470 | 2_4:-38467045 | None:intergenic |
| GATAAAGAAACACAACAGCT+TGG | 0.498328 | 2_4:-38467092 | None:intergenic |
| AGCAGGATATTCATGTGGTC+CGG | 0.500729 | 2_4:+38466572 | Msa0327020:CDS |
| ACATTCCCAGTTGGATCCAA+TGG | 0.502942 | 2_4:-38465559 | None:intergenic |
| CTGGGAATGTGACAATAAGA+TGG | 0.503167 | 2_4:+38465572 | Msa0327020:CDS |
| GGACCCTTCAGGTGCAATCT+CGG | 0.506260 | 2_4:+38466467 | Msa0327020:CDS |
| TGGAACTTCAACTTCAGGCA+TGG | 0.508911 | 2_4:+38465317 | Msa0327020:exon |
| CAAGACAGTTAAACTACCTC+AGG | 0.509450 | 2_4:+38466527 | Msa0327020:CDS |
| GTCATCATTACAACACTTGT+TGG | 0.509754 | 2_4:-38468470 | None:intergenic |
| CAGATGGGTGTAGGACTCTC+CGG | 0.515620 | 2_4:+38466495 | Msa0327020:CDS |
| ATCTGAGGTGCTTATGAAGA+AGG | 0.516290 | 2_4:+38468322 | Msa0327020:CDS |
| AAGGTGGTGTGCTAACATCT+TGG | 0.517435 | 2_4:+38466439 | Msa0327020:CDS |
| ACAACAGCTTGGGTTCTTGG+AGG | 0.528958 | 2_4:-38467081 | None:intergenic |
| CTTATTGTCACATTCCCAGT+TGG | 0.532085 | 2_4:-38465568 | None:intergenic |
| TGTATTCAAAACTATAGACT+TGG | 0.537143 | 2_4:-38467791 | None:intergenic |
| GCTTGTCCAACTTGTGCTTG+TGG | 0.548007 | 2_4:+38467140 | Msa0327020:CDS |
| CTCATTCTTATATCTCCAGC+TGG | 0.550563 | 2_4:+38465414 | Msa0327020:CDS |
| TCTTGCCAAATTCTGCTCAA+AGG | 0.554568 | 2_4:+38468444 | Msa0327020:CDS |
| GGTAATAAGTCAACAACTTG+AGG | 0.555852 | 2_4:-38466378 | None:intergenic |
| TACATTTAGAGAGCTGAAGT+TGG | 0.560296 | 2_4:+38465371 | Msa0327020:CDS |
| TGCATATTGTAAGATGCTCC+AGG | 0.567353 | 2_4:-38466399 | None:intergenic |
| GAAATCATATGGGCCATGAT+GGG | 0.570678 | 2_4:+38466285 | Msa0327020:CDS |
| TGTGCTAACATCTTGGGGAC+AGG | 0.571959 | 2_4:+38466446 | Msa0327020:CDS |
| TACACAAACTGTTGCAAAGG+TGG | 0.573020 | 2_4:+38466423 | Msa0327020:CDS |
| ATGCCGAGATTGCACCTGAA+GGG | 0.577152 | 2_4:-38466470 | None:intergenic |
| TTGCTGGAAATAACAAGACT+AGG | 0.578763 | 2_4:+38467577 | Msa0327020:CDS |
| CCACATGAATATCCTGCTCC+CGG | 0.579683 | 2_4:-38466567 | None:intergenic |
| GTTGAAGGAACTCTCTTAGC+CGG | 0.580085 | 2_4:-38466591 | None:intergenic |
| GGAGCGCAAGCAACAGAACA+AGG | 0.580360 | 2_4:+38466306 | Msa0327020:CDS |
| CAATACACAAACTGTTGCAA+AGG | 0.581528 | 2_4:+38466420 | Msa0327020:CDS |
| TCGGCATTTCAGATGGGTGT+AGG | 0.583929 | 2_4:+38466486 | Msa0327020:CDS |
| TGATTTAATAATGGAAGCTG+GGG | 0.584574 | 2_4:+38468283 | Msa0327020:CDS |
| TGACAACCACAAGCACAAGT+TGG | 0.585659 | 2_4:-38467146 | None:intergenic |
| AAAGGGTATGAATCAGGAGG+TGG | 0.587392 | 2_4:-38468422 | None:intergenic |
| TGGGAATGTGACAATAAGAT+GGG | 0.590389 | 2_4:+38465573 | Msa0327020:CDS |
| ATGGCTTCATAAGGAAGAAG+TGG | 0.591100 | 2_4:-38467816 | None:intergenic |
| TCCATCCTAATGTCCATCCC+GGG | 0.595187 | 2_4:-38466248 | None:intergenic |
| AGATTCAAAGATCCTGAAAG+AGG | 0.596172 | 2_4:+38467554 | Msa0327020:CDS |
| AAGTTGGACAAGCTGTGACT+TGG | 0.597255 | 2_4:-38467130 | None:intergenic |
| AATGCCGAGATTGCACCTGA+AGG | 0.597959 | 2_4:-38466471 | None:intergenic |
| GGCCAAGAAAGAAATCATAT+GGG | 0.602816 | 2_4:+38466275 | Msa0327020:CDS |
| ATTATGTCATGGACATCAGA+TGG | 0.603721 | 2_4:+38465598 | Msa0327020:CDS |
| ATTTACACTCAAGCAAGGAT+GGG | 0.604012 | 2_4:+38468355 | Msa0327020:CDS |
| GATGGACATTAGGATGGACA+TGG | 0.605342 | 2_4:+38466253 | Msa0327020:CDS |
| GTATTCAAAACTATAGACTT+GGG | 0.605359 | 2_4:-38467790 | None:intergenic |
| ATACCGAAACATTATGAACC+CGG | 0.606089 | 2_4:+38466230 | Msa0327020:CDS |
| GCAATCTCGGCATTTCAGAT+GGG | 0.606491 | 2_4:+38466480 | Msa0327020:CDS |
| ACCCGGGATGGACATTAGGA+TGG | 0.607366 | 2_4:+38466247 | Msa0327020:CDS |
| TACCGAAACATTATGAACCC+GGG | 0.608883 | 2_4:+38466231 | Msa0327020:CDS |
| TTATTCTTACAGATGATCGT+AGG | 0.609804 | 2_4:+38466616 | Msa0327020:CDS |
| TTGATCCATTGGATCCAACT+GGG | 0.610985 | 2_4:+38465554 | Msa0327020:CDS |
| ATAGACTTAATTACACACAA+TGG | 0.611670 | 2_4:+38467730 | Msa0327020:CDS |
| GAAACATTATGAACCCGGGA+TGG | 0.613102 | 2_4:+38466235 | Msa0327020:CDS |
| TAAGATGGGATATTATGTCA+TGG | 0.615769 | 2_4:+38465587 | Msa0327020:CDS |
| GGTGGTGTGCTAACATCTTG+GGG | 0.624710 | 2_4:+38466441 | Msa0327020:CDS |
| AACACATTTACACTCAAGCA+AGG | 0.626909 | 2_4:+38468350 | Msa0327020:CDS |
| TAAAGGGAATGTGCAATCTG+AGG | 0.631122 | 2_4:+38468307 | Msa0327020:CDS |
| CCAAGCAATTTAAAATCCTG+AGG | 0.636131 | 2_4:-38466543 | None:intergenic |
| TGGGTGTAGGACTCTCCGGA+AGG | 0.662739 | 2_4:+38466499 | Msa0327020:CDS |
| GCACACGAACAGGACAGAGG+TGG | 0.678067 | 2_4:-38467641 | None:intergenic |
| CCGGGAGCAGGATATTCATG+TGG | 0.685860 | 2_4:+38466567 | Msa0327020:CDS |
| AAGAAAGGGTATGAATCAGG+AGG | 0.687329 | 2_4:-38468425 | None:intergenic |
| ATGGACATTAGGATGGACAT+GGG | 0.698791 | 2_4:+38466254 | Msa0327020:CDS |
| AATGCACACGAACAGGACAG+AGG | 0.710542 | 2_4:-38467644 | None:intergenic |
| AGACTTAATTACACACAATG+GGG | 0.720594 | 2_4:+38467732 | Msa0327020:CDS |
| ATTGTGTATGCAGATGACAC+AGG | 0.753079 | 2_4:+38468233 | Msa0327020:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTGATAATTTTATTCTTT+TGG | - | chr2_4:38465762-38465781 | None:intergenic | 10.0% |
| !! | AAATAATGTTATAACTTATA+AGG | - | chr2_4:38467487-38467506 | None:intergenic | 10.0% |
| !! | TTATAAGTTATAACATTATT+TGG | + | chr2_4:38467486-38467505 | Msa0327020:intron | 10.0% |
| !! | GATTGAAAAAATAAATAAAT+TGG | - | chr2_4:38468044-38468063 | None:intergenic | 10.0% |
| !! | GAATTACAAACATAAATTAA+CGG | + | chr2_4:38467885-38467904 | Msa0327020:intron | 15.0% |
| !! | ATTCTACAATGATTTAATAA+TGG | + | chr2_4:38468274-38468293 | Msa0327020:CDS | 15.0% |
| !! | TTGCATATATGAAAAAACAT+AGG | + | chr2_4:38465446-38465465 | Msa0327020:intron | 20.0% |
| !!! | ATTTTATTTTATGCTTGTAG+AGG | + | chr2_4:38465528-38465547 | Msa0327020:intron | 20.0% |
| !! | TTAATATTCGCATAATAACA+CGG | + | chr2_4:38465942-38465961 | Msa0327020:intron | 20.0% |
| !!! | CGAAAAACATATTTTCAAAA+TGG | + | chr2_4:38466028-38466047 | Msa0327020:intron | 20.0% |
| !! | TAATAGTACATTTGTATTCA+AGG | - | chr2_4:38466985-38467004 | None:intergenic | 20.0% |
| !!! | AAGACTAATAATCATGATTT+TGG | - | chr2_4:38467377-38467396 | None:intergenic | 20.0% |
| !! | GCATATAAAAGACAATTATA+AGG | + | chr2_4:38467668-38467687 | Msa0327020:CDS | 20.0% |
| !! | AAGACAATTATAAGGATTAT+TGG | + | chr2_4:38467676-38467695 | Msa0327020:CDS | 20.0% |
| !! | ATATTTGAAGAACTTACTTA+TGG | - | chr2_4:38467838-38467857 | None:intergenic | 20.0% |
| !! | TCAAGTAAACAAAATATAGA+CGG | - | chr2_4:38467867-38467886 | None:intergenic | 20.0% |
| !!! | AAATAAATTGGCTTGAAATT+TGG | - | chr2_4:38468032-38468051 | None:intergenic | 20.0% |
| !! | ATAGGGATATTATATGTATT+TGG | - | chr2_4:38468158-38468177 | None:intergenic | 20.0% |
| !! | AAATGATGCAATAATCAAAT+AGG | - | chr2_4:38468498-38468517 | None:intergenic | 20.0% |
| !!! | TTATTGCATCATTTTTCATT+TGG | + | chr2_4:38468504-38468523 | Msa0327020:CDS | 20.0% |
| !!! | CATCATTTTTGGAAACATTT+TGG | - | chr2_4:38465716-38465735 | None:intergenic | 25.0% |
| ! | CTAGAAAAGGATTTGAATAA+TGG | + | chr2_4:38465850-38465869 | Msa0327020:intron | 25.0% |
| !! | TTATGTGTTGTTACTATATC+AGG | - | chr2_4:38465892-38465911 | None:intergenic | 25.0% |
| ! | AGTAACTGAGATTCATTTAA+AGG | - | chr2_4:38466059-38466078 | None:intergenic | 25.0% |
| !! | GATACTATGATGTCAAATTT+TGG | + | chr2_4:38466175-38466194 | Msa0327020:intron | 25.0% |
| ! | CTATTTGCAATATACTCAAA+GGG | - | chr2_4:38466676-38466695 | None:intergenic | 25.0% |
| ! | ACTATTTGCAATATACTCAA+AGG | - | chr2_4:38466677-38466696 | None:intergenic | 25.0% |
| ! | GAGTATATTGCAAATAGTTA+TGG | + | chr2_4:38466679-38466698 | Msa0327020:intron | 25.0% |
| ! | TATTAGATAATACCATTTCC+AGG | - | chr2_4:38466907-38466926 | None:intergenic | 25.0% |
| ! | TAATGTGGAAGTAGAAATTA+AGG | - | chr2_4:38467201-38467220 | None:intergenic | 25.0% |
| ! | TTAAAAGTTGGCTAATAATG+TGG | - | chr2_4:38467216-38467235 | None:intergenic | 25.0% |
| ! | GTTGCATCATAATCATTTAT+AGG | + | chr2_4:38467248-38467267 | Msa0327020:intron | 25.0% |
| ! | GAAATTCAGTCAAATACAAT+TGG | + | chr2_4:38467275-38467294 | Msa0327020:intron | 25.0% |
| !! | AATAATCATGATTTTGGACA+CGG | - | chr2_4:38467371-38467390 | None:intergenic | 25.0% |
| !!! | GATTATTAGTCTTAACCATA+TGG | + | chr2_4:38467384-38467403 | Msa0327020:intron | 25.0% |
| !!! | CACAATATAAAAGGTTTTAG+AGG | - | chr2_4:38467431-38467450 | None:intergenic | 25.0% |
| !!! | CTCTAAAACCTTTTATATTG+TGG | + | chr2_4:38467429-38467448 | Msa0327020:intron | 25.0% |
| ! | ATAGACTTAATTACACACAA+TGG | + | chr2_4:38467730-38467749 | Msa0327020:CDS | 25.0% |
| ! | TAGACTTAATTACACACAAT+GGG | + | chr2_4:38467731-38467750 | Msa0327020:CDS | 25.0% |
| ! | GTATTCAAAACTATAGACTT+GGG | - | chr2_4:38467793-38467812 | None:intergenic | 25.0% |
| ! | TGTATTCAAAACTATAGACT+TGG | - | chr2_4:38467794-38467813 | None:intergenic | 25.0% |
| ! | AAAATACCAAGCTTGAAATA+TGG | + | chr2_4:38468065-38468084 | Msa0327020:intron | 25.0% |
| ! | ATGAAACTCTATGCATTATA+GGG | - | chr2_4:38468175-38468194 | None:intergenic | 25.0% |
| !!! | GTTTTTTTAACTTTTGTGCA+TGG | + | chr2_4:38468206-38468225 | Msa0327020:intron | 25.0% |
| !! | AATGATTTAATAATGGAAGC+TGG | + | chr2_4:38468281-38468300 | Msa0327020:CDS | 25.0% |
| !! | ATGATTTAATAATGGAAGCT+GGG | + | chr2_4:38468282-38468301 | Msa0327020:CDS | 25.0% |
| TAAGATGGGATATTATGTCA+TGG | + | chr2_4:38465587-38465606 | Msa0327020:CDS | 30.0% | |
| ! | CTGATCATGCTATTCTTTTA+AGG | + | chr2_4:38465650-38465669 | Msa0327020:intron | 30.0% |
| TCCAAAAATGATGAAATCAC+TGG | + | chr2_4:38465723-38465742 | Msa0327020:intron | 30.0% | |
| ! | ACCAGTGATTTCATCATTTT+TGG | - | chr2_4:38465727-38465746 | None:intergenic | 30.0% |
| GAAAAGGATTTGAATAATGG+TGG | + | chr2_4:38465853-38465872 | Msa0327020:intron | 30.0% | |
| TTAATCTCCATAATTACACG+TGG | + | chr2_4:38466087-38466106 | Msa0327020:intron | 30.0% | |
| TCTGTAAGAATAACAGTTGA+AGG | - | chr2_4:38466609-38466628 | None:intergenic | 30.0% | |
| TTATTCTTACAGATGATCGT+AGG | + | chr2_4:38466616-38466635 | Msa0327020:CDS | 30.0% | |
| TTTAATACTGCCGAGAATTA+TGG | + | chr2_4:38466741-38466760 | Msa0327020:intron | 30.0% | |
| CTACATTTGACCATAATTCT+CGG | - | chr2_4:38466754-38466773 | None:intergenic | 30.0% | |
| ACTGCATAGGAAAAAAATAC+AGG | - | chr2_4:38467023-38467042 | None:intergenic | 30.0% | |
| ATAAAGAAACACAACAGCTT+GGG | - | chr2_4:38467094-38467113 | None:intergenic | 30.0% | |
| ATTTGTCATTATGCAAATGC+AGG | + | chr2_4:38467529-38467548 | Msa0327020:intron | 30.0% | |
| AGACTTAATTACACACAATG+GGG | + | chr2_4:38467732-38467751 | Msa0327020:CDS | 30.0% | |
| AACTTACTTATGGCTTCATA+AGG | - | chr2_4:38467828-38467847 | None:intergenic | 30.0% | |
| ! | GTTGTCTTATTAAGATCAGA+CGG | - | chr2_4:38468092-38468111 | None:intergenic | 30.0% |
| ATGTATTTGGATTGCATATG+TGG | - | chr2_4:38468145-38468164 | None:intergenic | 30.0% | |
| CATGAAACTCTATGCATTAT+AGG | - | chr2_4:38468176-38468195 | None:intergenic | 30.0% | |
| ! | TGATTTAATAATGGAAGCTG+GGG | + | chr2_4:38468283-38468302 | Msa0327020:CDS | 30.0% |
| TTTCTTGGAACTTCAACTTC+AGG | + | chr2_4:38465312-38465331 | Msa0327020:five_prime_UTR | 35.0% | |
| TACATTTAGAGAGCTGAAGT+TGG | + | chr2_4:38465371-38465390 | Msa0327020:CDS | 35.0% | |
| ATGCAAAGTAATTTACCAGC+TGG | - | chr2_4:38465432-38465451 | None:intergenic | 35.0% | |
| TGGGAATGTGACAATAAGAT+GGG | + | chr2_4:38465573-38465592 | Msa0327020:CDS | 35.0% | |
| ATTATGTCATGGACATCAGA+TGG | + | chr2_4:38465598-38465617 | Msa0327020:CDS | 35.0% | |
| ATGGACATCAGATGGTTATA+TGG | + | chr2_4:38465606-38465625 | Msa0327020:CDS | 35.0% | |
| TAGCATGATCAGACAAAGTT+TGG | - | chr2_4:38465642-38465661 | None:intergenic | 35.0% | |
| TAGATTCGAGAAGCTAGAAA+AGG | + | chr2_4:38465837-38465856 | Msa0327020:intron | 35.0% | |
| GTGTAACACACATAGATGTT+TGG | + | chr2_4:38465964-38465983 | Msa0327020:intron | 35.0% | |
| !! | ATATGTTTTTCGATACGCAC+TGG | - | chr2_4:38466020-38466039 | None:intergenic | 35.0% |
| AATGAATCTCAGTTACTTCG+AGG | + | chr2_4:38466062-38466081 | Msa0327020:intron | 35.0% | |
| ATGAATCTCAGTTACTTCGA+GGG | + | chr2_4:38466063-38466082 | Msa0327020:intron | 35.0% | |
| CTATCATCCACGTGTAATTA+TGG | - | chr2_4:38466097-38466116 | None:intergenic | 35.0% | |
| !! | CTATGATGTCAAATTTTGGC+AGG | + | chr2_4:38466179-38466198 | Msa0327020:intron | 35.0% |
| ATACCGAAACATTATGAACC+CGG | + | chr2_4:38466230-38466249 | Msa0327020:CDS | 35.0% | |
| GGCCAAGAAAGAAATCATAT+GGG | + | chr2_4:38466275-38466294 | Msa0327020:CDS | 35.0% | |
| GGTAATAAGTCAACAACTTG+AGG | - | chr2_4:38466381-38466400 | None:intergenic | 35.0% | |
| !! | CAAGTTGTTGACTTATTACC+TGG | + | chr2_4:38466381-38466400 | Msa0327020:CDS | 35.0% |
| CAATACACAAACTGTTGCAA+AGG | + | chr2_4:38466420-38466439 | Msa0327020:CDS | 35.0% | |
| ! | CCAAGCAATTTAAAATCCTG+AGG | - | chr2_4:38466546-38466565 | None:intergenic | 35.0% |
| ! | CCTCAGGATTTTAAATTGCT+TGG | + | chr2_4:38466543-38466562 | Msa0327020:CDS | 35.0% |
| ! | GGATTTTAAATTGCTTGGAC+CGG | + | chr2_4:38466548-38466567 | Msa0327020:CDS | 35.0% |
| ! | GATTTTAAATTGCTTGGACC+GGG | + | chr2_4:38466549-38466568 | Msa0327020:CDS | 35.0% |
| AGGATCTGCAATTACAATCA+AGG | - | chr2_4:38466839-38466858 | None:intergenic | 35.0% | |
| ! | ATCCTTTTCGAAAACCTTGA+TGG | + | chr2_4:38466854-38466873 | Msa0327020:intron | 35.0% |
| ! | AACCATCAAGGTTTTCGAAA+AGG | - | chr2_4:38466859-38466878 | None:intergenic | 35.0% |
| TAAAGAAACTGTCCTGGAAA+TGG | + | chr2_4:38466892-38466911 | Msa0327020:intron | 35.0% | |
| ATAAGTACATGTCACATTCC+AGG | - | chr2_4:38467048-38467067 | None:intergenic | 35.0% | |
| GATAAAGAAACACAACAGCT+TGG | - | chr2_4:38467095-38467114 | None:intergenic | 35.0% | |
| AGATTCAAAGATCCTGAAAG+AGG | + | chr2_4:38467554-38467573 | Msa0327020:CDS | 35.0% | |
| TTGCTGGAAATAACAAGACT+AGG | + | chr2_4:38467577-38467596 | Msa0327020:CDS | 35.0% | |
| ! | GTGCATTGCAATAAAGGTTT+TGG | - | chr2_4:38467618-38467637 | None:intergenic | 35.0% |
| GGGTAACATTACTGAGATTA+GGG | - | chr2_4:38467773-38467792 | None:intergenic | 35.0% | |
| TGGGTAACATTACTGAGATT+AGG | - | chr2_4:38467774-38467793 | None:intergenic | 35.0% | |
| CGACGTCTCTAATACAAATT+CGG | + | chr2_4:38467937-38467956 | Msa0327020:intron | 35.0% | |
| CATTGCAATCAACATGTTTG+TGG | + | chr2_4:38467983-38468002 | Msa0327020:intron | 35.0% | |
| AACACATTTACACTCAAGCA+AGG | + | chr2_4:38468350-38468369 | Msa0327020:CDS | 35.0% | |
| ATTTACACTCAAGCAAGGAT+GGG | + | chr2_4:38468355-38468374 | Msa0327020:CDS | 35.0% | |
| CCATTAAAGTATACCCTTCT+TGG | - | chr2_4:38468386-38468405 | None:intergenic | 35.0% | |
| ! | CCAAGAAGGGTATACTTTAA+TGG | + | chr2_4:38468383-38468402 | Msa0327020:CDS | 35.0% |
| GTCATCATTACAACACTTGT+TGG | - | chr2_4:38468473-38468492 | None:intergenic | 35.0% | |
| TCAACTTCAGGCATGGAATT+TGG | + | chr2_4:38465324-38465343 | Msa0327020:exon | 40.0% | |
| TCAGGCATGGAATTTGGTAA+TGG | + | chr2_4:38465330-38465349 | Msa0327020:exon | 40.0% | |
| CTCATTCTTATATCTCCAGC+TGG | + | chr2_4:38465414-38465433 | Msa0327020:CDS | 40.0% | |
| !! | TGTAGAGGCATTTGATCCAT+TGG | + | chr2_4:38465543-38465562 | Msa0327020:intron | 40.0% |
| TTTGATCCATTGGATCCAAC+TGG | + | chr2_4:38465553-38465572 | Msa0327020:CDS | 40.0% | |
| TTGATCCATTGGATCCAACT+GGG | + | chr2_4:38465554-38465573 | Msa0327020:CDS | 40.0% | |
| CTTATTGTCACATTCCCAGT+TGG | - | chr2_4:38465571-38465590 | None:intergenic | 40.0% | |
| CTGGGAATGTGACAATAAGA+TGG | + | chr2_4:38465572-38465591 | Msa0327020:CDS | 40.0% | |
| TGTTTGGATCCCTTAACCAT+AGG | + | chr2_4:38465980-38465999 | Msa0327020:intron | 40.0% | |
| ACACGAACTCCTATGGTTAA+GGG | - | chr2_4:38465992-38466011 | None:intergenic | 40.0% | |
| TGAATCTCAGTTACTTCGAG+GGG | + | chr2_4:38466064-38466083 | Msa0327020:intron | 40.0% | |
| TACCGAAACATTATGAACCC+GGG | + | chr2_4:38466231-38466250 | Msa0327020:CDS | 40.0% | |
| ATCCCGGGTTCATAATGTTT+CGG | - | chr2_4:38466236-38466255 | None:intergenic | 40.0% | |
| ATGGACATTAGGATGGACAT+GGG | + | chr2_4:38466254-38466273 | Msa0327020:CDS | 40.0% | |
| GGGCCAAGAAAGAAATCATA+TGG | + | chr2_4:38466274-38466293 | Msa0327020:CDS | 40.0% | |
| GGCCCATATGATTTCTTTCT+TGG | - | chr2_4:38466280-38466299 | None:intergenic | 40.0% | |
| AGAAATCATATGGGCCATGA+TGG | + | chr2_4:38466284-38466303 | Msa0327020:CDS | 40.0% | |
| GAAATCATATGGGCCATGAT+GGG | + | chr2_4:38466285-38466304 | Msa0327020:CDS | 40.0% | |
| TGCATATTGTAAGATGCTCC+AGG | - | chr2_4:38466402-38466421 | None:intergenic | 40.0% | |
| TACACAAACTGTTGCAAAGG+TGG | + | chr2_4:38466423-38466442 | Msa0327020:CDS | 40.0% | |
| ! | AACTGTCTTGTTAGTCCTTC+CGG | - | chr2_4:38466517-38466536 | None:intergenic | 40.0% |
| CAAGACAGTTAAACTACCTC+AGG | + | chr2_4:38466527-38466546 | Msa0327020:CDS | 40.0% | |
| !! | AGCGTTGATTGTAACCATCA+AGG | - | chr2_4:38466871-38466890 | None:intergenic | 40.0% |
| !! | ACGCTTTAAAGAAACTGTCC+TGG | + | chr2_4:38466886-38466905 | Msa0327020:intron | 40.0% |
| !!! | TTTTTTCCTATGCAGTGTCC+TGG | + | chr2_4:38467027-38467046 | Msa0327020:intron | 40.0% |
| CTCGACAGCAGTTTAAAAGT+TGG | - | chr2_4:38467228-38467247 | None:intergenic | 40.0% | |
| ! | CAACTTTTAAACTGCTGTCG+AGG | + | chr2_4:38467226-38467245 | Msa0327020:intron | 40.0% |
| TAACTGCTATTGCAGCCATA+TGG | - | chr2_4:38467402-38467421 | None:intergenic | 40.0% | |
| AACTGCGGCCACAATATAAA+AGG | - | chr2_4:38467440-38467459 | None:intergenic | 40.0% | |
| TATTTCCAGCAACCTCTTTC+AGG | - | chr2_4:38467569-38467588 | None:intergenic | 40.0% | |
| ATGGCTTCATAAGGAAGAAG+TGG | - | chr2_4:38467819-38467838 | None:intergenic | 40.0% | |
| AAGATCAGACTGCACATATG+TGG | - | chr2_4:38468114-38468133 | None:intergenic | 40.0% | |
| TTGGATTGCATATGTGGTTG+TGG | - | chr2_4:38468139-38468158 | None:intergenic | 40.0% | |
| ATTGTGTATGCAGATGACAC+AGG | + | chr2_4:38468233-38468252 | Msa0327020:intron | 40.0% | |
| GATGACACAGGAATGTTCTA+TGG | + | chr2_4:38468245-38468264 | Msa0327020:intron | 40.0% | |
| TAAAGGGAATGTGCAATCTG+AGG | + | chr2_4:38468307-38468326 | Msa0327020:CDS | 40.0% | |
| ! | ATCTGAGGTGCTTATGAAGA+AGG | + | chr2_4:38468322-38468341 | Msa0327020:CDS | 40.0% |
| CATTTACACTCAAGCAAGGA+TGG | + | chr2_4:38468354-38468373 | Msa0327020:CDS | 40.0% | |
| ! | AAGAAAGGGTATGAATCAGG+AGG | - | chr2_4:38468428-38468447 | None:intergenic | 40.0% |
| GAGCAGAATTTGGCAAGAAA+GGG | - | chr2_4:38468442-38468461 | None:intergenic | 40.0% | |
| TGAGCAGAATTTGGCAAGAA+AGG | - | chr2_4:38468443-38468462 | None:intergenic | 40.0% | |
| TCTTGCCAAATTCTGCTCAA+AGG | + | chr2_4:38468444-38468463 | Msa0327020:CDS | 40.0% | |
| TGGAACTTCAACTTCAGGCA+TGG | + | chr2_4:38465317-38465336 | Msa0327020:exon | 45.0% | |
| ACATTCCCAGTTGGATCCAA+TGG | - | chr2_4:38465562-38465581 | None:intergenic | 45.0% | |
| GACACGAACTCCTATGGTTA+AGG | - | chr2_4:38465993-38466012 | None:intergenic | 45.0% | |
| AACCATAGGAGTTCGTGTCA+TGG | + | chr2_4:38465994-38466013 | Msa0327020:intron | 45.0% | |
| GAAACATTATGAACCCGGGA+TGG | + | chr2_4:38466235-38466254 | Msa0327020:CDS | 45.0% | |
| GATGGACATTAGGATGGACA+TGG | + | chr2_4:38466253-38466272 | Msa0327020:CDS | 45.0% | |
| GGACTTCTCTTGCAACTATG+AGG | - | chr2_4:38466360-38466379 | None:intergenic | 45.0% | |
| AAGGTGGTGTGCTAACATCT+TGG | + | chr2_4:38466439-38466458 | Msa0327020:CDS | 45.0% | |
| AGGTGGTGTGCTAACATCTT+GGG | + | chr2_4:38466440-38466459 | Msa0327020:CDS | 45.0% | |
| TGCAATCTCGGCATTTCAGA+TGG | + | chr2_4:38466479-38466498 | Msa0327020:CDS | 45.0% | |
| GCAATCTCGGCATTTCAGAT+GGG | + | chr2_4:38466480-38466499 | Msa0327020:CDS | 45.0% | |
| AGCAGGATATTCATGTGGTC+CGG | + | chr2_4:38466572-38466591 | Msa0327020:CDS | 45.0% | |
| GTTGAAGGAACTCTCTTAGC+CGG | - | chr2_4:38466594-38466613 | None:intergenic | 45.0% | |
| AACACAACAGCTTGGGTTCT+TGG | - | chr2_4:38467087-38467106 | None:intergenic | 45.0% | |
| AAGTTGGACAAGCTGTGACT+TGG | - | chr2_4:38467133-38467152 | None:intergenic | 45.0% | |
| TGACAACCACAAGCACAAGT+TGG | - | chr2_4:38467149-38467168 | None:intergenic | 45.0% | |
| AAGATCCTGAAAGAGGTTGC+TGG | + | chr2_4:38467561-38467580 | Msa0327020:CDS | 45.0% | |
| TGGCGTGTGCATTGCAATAA+AGG | - | chr2_4:38467624-38467643 | None:intergenic | 45.0% | |
| ATATGCCAATGCACACGAAC+AGG | - | chr2_4:38467654-38467673 | None:intergenic | 45.0% | |
| GACGGTCCATATTTCAAGCT+TGG | - | chr2_4:38468074-38468093 | None:intergenic | 45.0% | |
| ! | ATAATGGAAGCTGGGGCTAA+AGG | + | chr2_4:38468290-38468309 | Msa0327020:CDS | 45.0% |
| TAATGGAAGCTGGGGCTAAA+GGG | + | chr2_4:38468291-38468310 | Msa0327020:CDS | 45.0% | |
| !! | AAGGATGGGCTTTTCCAAGA+AGG | + | chr2_4:38468369-38468388 | Msa0327020:CDS | 45.0% |
| !! | AGGATGGGCTTTTCCAAGAA+GGG | + | chr2_4:38468370-38468389 | Msa0327020:CDS | 45.0% |
| ! | AAAGGGTATGAATCAGGAGG+TGG | - | chr2_4:38468425-38468444 | None:intergenic | 45.0% |
| ! | GGCAAGAAAGGGTATGAATC+AGG | - | chr2_4:38468431-38468450 | None:intergenic | 45.0% |
| GGTAGCCTTTGAGCAGAATT+TGG | - | chr2_4:38468452-38468471 | None:intergenic | 45.0% | |
| ATGAACCCGGGATGGACATT+AGG | + | chr2_4:38466243-38466262 | Msa0327020:CDS | 50.0% | |
| TCCATCCTAATGTCCATCCC+GGG | - | chr2_4:38466251-38466270 | None:intergenic | 50.0% | |
| GTCCATCCTAATGTCCATCC+CGG | - | chr2_4:38466252-38466271 | None:intergenic | 50.0% | |
| GGTGGTGTGCTAACATCTTG+GGG | + | chr2_4:38466441-38466460 | Msa0327020:CDS | 50.0% | |
| TGTGCTAACATCTTGGGGAC+AGG | + | chr2_4:38466446-38466465 | Msa0327020:CDS | 50.0% | |
| ATGCCGAGATTGCACCTGAA+GGG | - | chr2_4:38466473-38466492 | None:intergenic | 50.0% | |
| AATGCCGAGATTGCACCTGA+AGG | - | chr2_4:38466474-38466493 | None:intergenic | 50.0% | |
| TCGGCATTTCAGATGGGTGT+AGG | + | chr2_4:38466486-38466505 | Msa0327020:CDS | 50.0% | |
| CCACATGAATATCCTGCTCC+CGG | - | chr2_4:38466570-38466589 | None:intergenic | 50.0% | |
| CTGCAATACGACTGAGACTG+AGG | - | chr2_4:38466786-38466805 | None:intergenic | 50.0% | |
| CACAAAGCGACGATCACTAC+AGG | + | chr2_4:38466953-38466972 | Msa0327020:intron | 50.0% | |
| CACATTCCAGGACACTGCAT+AGG | - | chr2_4:38467036-38467055 | None:intergenic | 50.0% | |
| ACAACAGCTTGGGTTCTTGG+AGG | - | chr2_4:38467084-38467103 | None:intergenic | 50.0% | |
| GCTTGTCCAACTTGTGCTTG+TGG | + | chr2_4:38467140-38467159 | Msa0327020:CDS | 50.0% | |
| AATGCACACGAACAGGACAG+AGG | - | chr2_4:38467647-38467666 | None:intergenic | 50.0% | |
| TCTGTCCTGTTCGTGTGCAT+TGG | + | chr2_4:38467646-38467665 | Msa0327020:CDS | 50.0% | |
| GGCCATGACACGAACTCCTA+TGG | - | chr2_4:38465999-38466018 | None:intergenic | 55.0% | |
| ACCCGGGATGGACATTAGGA+TGG | + | chr2_4:38466247-38466266 | Msa0327020:CDS | 55.0% | |
| ! | TGTTGCTTGCGCTCCCATCA+TGG | - | chr2_4:38466301-38466320 | None:intergenic | 55.0% |
| GGAGCGCAAGCAACAGAACA+AGG | + | chr2_4:38466306-38466325 | Msa0327020:CDS | 55.0% | |
| GGACCCTTCAGGTGCAATCT+CGG | + | chr2_4:38466467-38466486 | Msa0327020:CDS | 55.0% | |
| CAGATGGGTGTAGGACTCTC+CGG | + | chr2_4:38466495-38466514 | Msa0327020:CDS | 55.0% | |
| AAATTGCTTGGACCGGGAGC+AGG | + | chr2_4:38466555-38466574 | Msa0327020:CDS | 55.0% | |
| CCGGGAGCAGGATATTCATG+TGG | + | chr2_4:38466567-38466586 | Msa0327020:CDS | 55.0% | |
| TCTTGGGGACAGGACCCTTC+AGG | + | chr2_4:38466456-38466475 | Msa0327020:CDS | 60.0% | |
| TGGGTGTAGGACTCTCCGGA+AGG | + | chr2_4:38466499-38466518 | Msa0327020:CDS | 60.0% | |
| GCGTCCTGTGACTGCAACTG+CGG | - | chr2_4:38467455-38467474 | None:intergenic | 60.0% | |
| GCACACGAACAGGACAGAGG+TGG | - | chr2_4:38467644-38467663 | None:intergenic | 60.0% | |
| GTGGCCGCAGTTGCAGTCAC+AGG | + | chr2_4:38467448-38467467 | Msa0327020:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 38465306 | 38468532 | 38465306 | ID=Msa0327020;Name=Msa0327020 |
| chr2_4 | mRNA | 38465306 | 38468532 | 38465306 | ID=Msa0327020-mRNA-1;Parent=Msa0327020;Name=Msa0327020-mRNA-1;_AED=0.08;_eAED=0.08;_QI=30|1|0.83|1|1|1|6|0|453 |
| chr2_4 | exon | 38465306 | 38465435 | 38465306 | ID=Msa0327020-mRNA-1:exon:11516;Parent=Msa0327020-mRNA-1 |
| chr2_4 | exon | 38465548 | 38465627 | 38465548 | ID=Msa0327020-mRNA-1:exon:11517;Parent=Msa0327020-mRNA-1 |
| chr2_4 | exon | 38466201 | 38466657 | 38466201 | ID=Msa0327020-mRNA-1:exon:11518;Parent=Msa0327020-mRNA-1 |
| chr2_4 | exon | 38467042 | 38467189 | 38467042 | ID=Msa0327020-mRNA-1:exon:11519;Parent=Msa0327020-mRNA-1 |
| chr2_4 | exon | 38467551 | 38467840 | 38467551 | ID=Msa0327020-mRNA-1:exon:11520;Parent=Msa0327020-mRNA-1 |
| chr2_4 | exon | 38468246 | 38468532 | 38468246 | ID=Msa0327020-mRNA-1:exon:11521;Parent=Msa0327020-mRNA-1 |
| chr2_4 | five_prime_UTR | 38465306 | 38465335 | 38465306 | ID=Msa0327020-mRNA-1:five_prime_utr;Parent=Msa0327020-mRNA-1 |
| chr2_4 | CDS | 38465336 | 38465435 | 38465336 | ID=Msa0327020-mRNA-1:cds;Parent=Msa0327020-mRNA-1 |
| chr2_4 | CDS | 38465548 | 38465627 | 38465548 | ID=Msa0327020-mRNA-1:cds;Parent=Msa0327020-mRNA-1 |
| chr2_4 | CDS | 38466201 | 38466657 | 38466201 | ID=Msa0327020-mRNA-1:cds;Parent=Msa0327020-mRNA-1 |
| chr2_4 | CDS | 38467042 | 38467189 | 38467042 | ID=Msa0327020-mRNA-1:cds;Parent=Msa0327020-mRNA-1 |
| chr2_4 | CDS | 38467551 | 38467840 | 38467551 | ID=Msa0327020-mRNA-1:cds;Parent=Msa0327020-mRNA-1 |
| chr2_4 | CDS | 38468246 | 38468532 | 38468246 | ID=Msa0327020-mRNA-1:cds;Parent=Msa0327020-mRNA-1 |
| Gene Sequence |
| Protein sequence |
