Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0708510 | XP_003629841.1 | 48.913 | 184 | 75 | 7 | 31 | 196 | 51 | 233 | 1.08e-33 | 143 |
Msa0708510 | XP_003629841.1 | 92.958 | 213 | 6 | 3 | 231 | 434 | 104 | 316 | 5.99e-109 | 344 |
Msa0708510 | XP_003629841.1 | 95.469 | 309 | 13 | 1 | 433 | 740 | 8 | 316 | 3.48e-173 | 509 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0708510 | sp|Q8LEJ6|FLA11_ARATH | 51.579 | 190 | 81 | 6 | 496 | 683 | 18 | 198 | 6.00e-49 | 175 |
Msa0708510 | sp|Q8LEJ6|FLA11_ARATH | 49.682 | 157 | 64 | 6 | 231 | 377 | 47 | 198 | 3.88e-34 | 134 |
Msa0708510 | sp|Q8LEJ6|FLA11_ARATH | 41.463 | 164 | 77 | 4 | 50 | 204 | 27 | 180 | 4.60e-28 | 116 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0708510 | G7L794 | 48.913 | 184 | 75 | 7 | 31 | 196 | 51 | 233 | 5.14e-34 | 143 |
Msa0708510 | G7L794 | 92.958 | 213 | 6 | 3 | 231 | 434 | 104 | 316 | 2.86e-109 | 344 |
Msa0708510 | G7L794 | 95.469 | 309 | 13 | 1 | 433 | 740 | 8 | 316 | 1.66e-173 | 509 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0618050 | Msa0708510 | 0.891278 | 4.596459e-74 | -8.615850e-47 |
Msa0618600 | Msa0708510 | 0.943499 | 1.077543e-102 | -8.615850e-47 |
Msa0643240 | Msa0708510 | 0.931011 | 7.084584e-94 | -8.615850e-47 |
Msa0657380 | Msa0708510 | 0.976708 | 2.406806e-142 | -8.615850e-47 |
Msa0682920 | Msa0708510 | 0.925457 | 1.789240e-90 | -8.615850e-47 |
Msa0708510 | Msa0792190 | 0.901343 | 2.949773e-78 | -8.615850e-47 |
Msa0708510 | Msa1035290 | 0.878636 | 2.392015e-69 | -8.615850e-47 |
Msa0708510 | Msa1075380 | 0.893612 | 5.343609e-75 | -8.615850e-47 |
Msa0708510 | Msa1116460 | 0.894042 | 3.576668e-75 | -8.615850e-47 |
Msa0708510 | Msa1162860 | 0.820055 | 8.395198e-53 | -8.615850e-47 |
Msa0708510 | Msa1199250 | 0.945664 | 1.996659e-104 | -8.615850e-47 |
Msa0708510 | Msa1199260 | 0.861271 | 1.153607e-63 | -8.615850e-47 |
Msa0708510 | Msa1252480 | 0.932120 | 1.370105e-94 | -8.615850e-47 |
Msa0708510 | Msa1267350 | 0.897915 | 8.845582e-77 | -8.615850e-47 |
Msa0708510 | Msa1290460 | 0.810929 | 9.025684e-51 | -8.615850e-47 |
Msa0708510 | Msa1293220 | 0.934469 | 3.846112e-96 | -8.615850e-47 |
Msa0708510 | Msa1421310 | 0.895824 | 6.639569e-76 | -8.615850e-47 |
Msa0142380 | Msa0708510 | 0.901226 | 3.318102e-78 | -8.615850e-47 |
Msa0194000 | Msa0708510 | 0.930536 | 1.419964e-93 | -8.615850e-47 |
Msa0221820 | Msa0708510 | 0.884393 | 1.992367e-71 | -8.615850e-47 |
Msa0221830 | Msa0708510 | 0.819559 | 1.089930e-52 | -8.615850e-47 |
Msa0235870 | Msa0708510 | 0.908275 | 2.042534e-81 | -8.615850e-47 |
Msa0250450 | Msa0708510 | 0.875277 | 3.496534e-68 | -8.615850e-47 |
Msa0263440 | Msa0708510 | 0.954423 | 3.058814e-112 | -8.615850e-47 |
Msa0269380 | Msa0708510 | 0.900530 | 6.677924e-78 | -8.615850e-47 |
Msa0288900 | Msa0708510 | 0.931245 | 5.021340e-94 | -8.615850e-47 |
Msa0289060 | Msa0708510 | 0.864430 | 1.222909e-64 | -8.615850e-47 |
Msa0289100 | Msa0708510 | 0.866223 | 3.336694e-65 | -8.615850e-47 |
Msa0301030 | Msa0708510 | 0.958563 | 1.730414e-116 | -8.615850e-47 |
Msa0314220 | Msa0708510 | 0.947293 | 8.916707e-106 | -8.615850e-47 |
Msa0314330 | Msa0708510 | 0.906197 | 1.918947e-80 | -8.615850e-47 |
Msa0327020 | Msa0708510 | 0.885832 | 5.786731e-72 | -8.615850e-47 |
Msa0338580 | Msa0708510 | 0.919459 | 4.385094e-87 | -8.615850e-47 |
Msa0485970 | Msa0708510 | 0.904739 | 8.954004e-80 | -8.615850e-47 |
Msa0547390 | Msa0708510 | 0.924612 | 5.583168e-90 | -8.615850e-47 |
Msa0564950 | Msa0708510 | 0.860608 | 1.835188e-63 | -8.615850e-47 |
Msa0565260 | Msa0708510 | 0.925362 | 2.033556e-90 | -8.615850e-47 |
Msa0580580 | Msa0708510 | 0.883822 | 3.239922e-71 | -8.615850e-47 |
Msa0602110 | Msa0708510 | 0.928724 | 1.924045e-92 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0708510 | MtrunA17_Chr8g0379631 | 95.469 | 309 | 13 | 1 | 433 | 740 | 8 | 316 | 3.20e-177 | 509 |
Msa0708510 | MtrunA17_Chr8g0379631 | 92.958 | 213 | 6 | 3 | 231 | 434 | 104 | 316 | 5.51e-113 | 344 |
Msa0708510 | MtrunA17_Chr8g0379631 | 48.913 | 184 | 75 | 7 | 31 | 196 | 51 | 233 | 9.91e-38 | 143 |
Msa0708510 | MtrunA17_Chr8g0379621 | 94.175 | 309 | 17 | 1 | 433 | 740 | 8 | 316 | 1.19e-174 | 502 |
Msa0708510 | MtrunA17_Chr8g0379621 | 92.488 | 213 | 7 | 3 | 231 | 434 | 104 | 316 | 5.73e-114 | 347 |
Msa0708510 | MtrunA17_Chr8g0379621 | 48.370 | 184 | 78 | 6 | 25 | 196 | 55 | 233 | 2.40e-38 | 145 |
Msa0708510 | MtrunA17_Chr8g0379611 | 89.302 | 215 | 4 | 2 | 1 | 196 | 1 | 215 | 2.89e-123 | 371 |
Msa0708510 | MtrunA17_Chr8g0379611 | 43.729 | 295 | 142 | 10 | 447 | 739 | 16 | 288 | 1.39e-51 | 182 |
Msa0708510 | MtrunA17_Chr8g0379611 | 43.805 | 226 | 104 | 9 | 231 | 445 | 88 | 301 | 1.01e-37 | 143 |
Msa0708510 | MtrunA17_Chr2g0284451 | 61.165 | 309 | 77 | 8 | 440 | 737 | 15 | 291 | 3.14e-100 | 310 |
Msa0708510 | MtrunA17_Chr2g0284451 | 64.732 | 224 | 50 | 8 | 231 | 435 | 82 | 295 | 3.17e-68 | 226 |
Msa0708510 | MtrunA17_Chr2g0284451 | 44.762 | 210 | 91 | 7 | 6 | 196 | 12 | 215 | 1.61e-39 | 147 |
Msa0708510 | MtrunA17_Chr2g0284431 | 66.047 | 215 | 45 | 4 | 1 | 196 | 22 | 227 | 2.41e-71 | 234 |
Msa0708510 | MtrunA17_Chr2g0284431 | 52.232 | 224 | 90 | 5 | 518 | 740 | 89 | 296 | 5.60e-57 | 196 |
Msa0708510 | MtrunA17_Chr2g0284431 | 46.262 | 214 | 90 | 7 | 231 | 435 | 100 | 297 | 1.46e-42 | 156 |
Msa0708510 | MtrunA17_Chr2g0284411 | 81.818 | 132 | 16 | 1 | 73 | 196 | 75 | 206 | 1.30e-65 | 219 |
Msa0708510 | MtrunA17_Chr2g0284411 | 59.563 | 183 | 65 | 5 | 518 | 699 | 68 | 242 | 3.57e-57 | 196 |
Msa0708510 | MtrunA17_Chr2g0284411 | 46.948 | 213 | 82 | 8 | 231 | 428 | 79 | 275 | 1.61e-42 | 155 |
Msa0708510 | MtrunA17_Chr4g0029501 | 50.185 | 271 | 103 | 9 | 433 | 694 | 6 | 253 | 4.22e-64 | 215 |
Msa0708510 | MtrunA17_Chr4g0029501 | 57.233 | 159 | 48 | 3 | 58 | 196 | 53 | 211 | 5.90e-50 | 177 |
Msa0708510 | MtrunA17_Chr4g0029501 | 56.044 | 182 | 59 | 8 | 222 | 388 | 78 | 253 | 5.05e-49 | 174 |
Msa0708510 | MtrunA17_Chr4g0029441 | 49.402 | 251 | 101 | 9 | 496 | 740 | 53 | 283 | 1.47e-61 | 208 |
Msa0708510 | MtrunA17_Chr4g0029441 | 55.975 | 159 | 50 | 3 | 58 | 196 | 53 | 211 | 7.05e-49 | 174 |
Msa0708510 | MtrunA17_Chr4g0029441 | 56.886 | 167 | 53 | 7 | 222 | 375 | 78 | 238 | 2.39e-48 | 172 |
Msa0708510 | MtrunA17_Chr4g0026611 | 51.172 | 256 | 99 | 9 | 440 | 690 | 16 | 250 | 1.54e-61 | 208 |
Msa0708510 | MtrunA17_Chr4g0026611 | 49.545 | 220 | 75 | 5 | 2 | 196 | 7 | 215 | 3.97e-49 | 174 |
Msa0708510 | MtrunA17_Chr4g0026611 | 58.683 | 167 | 52 | 7 | 231 | 384 | 88 | 250 | 1.16e-47 | 171 |
Msa0708510 | MtrunA17_Chr4g0029331 | 62.011 | 179 | 58 | 5 | 492 | 669 | 41 | 210 | 5.41e-57 | 195 |
Msa0708510 | MtrunA17_Chr4g0029331 | 61.268 | 142 | 42 | 5 | 231 | 363 | 73 | 210 | 2.07e-42 | 155 |
Msa0708510 | MtrunA17_Chr4g0029331 | 42.439 | 205 | 80 | 5 | 1 | 196 | 24 | 199 | 1.11e-37 | 142 |
Msa0708510 | MtrunA17_Chr2g0326411 | 42.623 | 305 | 144 | 8 | 438 | 737 | 10 | 288 | 1.00e-56 | 195 |
Msa0708510 | MtrunA17_Chr2g0326411 | 46.445 | 211 | 73 | 6 | 10 | 196 | 13 | 207 | 7.46e-47 | 168 |
Msa0708510 | MtrunA17_Chr2g0326411 | 44.393 | 214 | 101 | 8 | 231 | 431 | 80 | 288 | 1.42e-40 | 150 |
Msa0708510 | MtrunA17_Chr2g0326421 | 43.945 | 289 | 125 | 8 | 419 | 706 | 1 | 253 | 1.12e-54 | 189 |
Msa0708510 | MtrunA17_Chr2g0326421 | 46.948 | 213 | 90 | 5 | 1 | 196 | 1 | 207 | 1.50e-48 | 172 |
Msa0708510 | MtrunA17_Chr2g0326421 | 50.838 | 179 | 74 | 6 | 231 | 400 | 80 | 253 | 4.01e-39 | 146 |
Msa0708510 | MtrunA17_Chr2g0326431 | 57.222 | 180 | 72 | 3 | 491 | 669 | 14 | 189 | 1.31e-53 | 185 |
Msa0708510 | MtrunA17_Chr2g0326431 | 57.746 | 142 | 47 | 5 | 231 | 363 | 52 | 189 | 7.90e-41 | 150 |
Msa0708510 | MtrunA17_Chr2g0326431 | 50.758 | 132 | 56 | 2 | 73 | 196 | 48 | 178 | 6.19e-35 | 133 |
Msa0708510 | MtrunA17_Chr4g0029431 | 57.921 | 202 | 68 | 8 | 467 | 667 | 29 | 214 | 8.18e-53 | 184 |
Msa0708510 | MtrunA17_Chr4g0029431 | 52.332 | 193 | 66 | 5 | 21 | 196 | 22 | 205 | 3.21e-49 | 174 |
Msa0708510 | MtrunA17_Chr4g0029431 | 57.857 | 140 | 47 | 5 | 231 | 361 | 78 | 214 | 4.06e-34 | 132 |
Msa0708510 | MtrunA17_Chr7g0263981 | 51.266 | 158 | 70 | 4 | 512 | 667 | 35 | 187 | 4.64e-42 | 154 |
Msa0708510 | MtrunA17_Chr7g0263981 | 47.518 | 141 | 60 | 5 | 231 | 361 | 51 | 187 | 1.21e-28 | 115 |
Msa0708510 | MtrunA17_Chr7g0263981 | 40.645 | 155 | 75 | 4 | 51 | 196 | 32 | 178 | 1.41e-26 | 109 |
Msa0708510 | MtrunA17_Chr2g0325021 | 42.458 | 179 | 93 | 6 | 491 | 667 | 14 | 184 | 7.82e-28 | 112 |
Msa0708510 | MtrunA17_Chr2g0325021 | 40.645 | 155 | 76 | 3 | 50 | 196 | 29 | 175 | 7.99e-18 | 84.0 |
Msa0708510 | MtrunA17_Chr2g0325021 | 33.503 | 197 | 103 | 6 | 231 | 403 | 49 | 241 | 4.24e-15 | 75.9 |
Msa0708510 | MtrunA17_Chr5g0448001 | 31.977 | 172 | 113 | 2 | 517 | 688 | 47 | 214 | 5.53e-18 | 84.7 |
Msa0708510 | MtrunA17_Chr5g0448001 | 30.625 | 160 | 99 | 4 | 231 | 382 | 59 | 214 | 4.19e-11 | 64.3 |
Msa0708510 | MtrunA17_Chr7g0246041 | 32.812 | 192 | 106 | 6 | 499 | 680 | 165 | 343 | 1.02e-15 | 80.1 |
Msa0708510 | MtrunA17_Chr2g0296571 | 30.769 | 156 | 97 | 4 | 517 | 667 | 194 | 343 | 3.49e-13 | 72.4 |
Msa0708510 | MtrunA17_Chr5g0448211 | 30.978 | 184 | 103 | 7 | 501 | 680 | 188 | 351 | 1.36e-11 | 67.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0708510 | AT5G03170.1 | 51.579 | 190 | 81 | 6 | 496 | 683 | 18 | 198 | 6.10e-50 | 175 |
Msa0708510 | AT5G03170.1 | 49.682 | 157 | 64 | 6 | 231 | 377 | 47 | 198 | 3.94e-35 | 134 |
Msa0708510 | AT5G03170.1 | 41.463 | 164 | 77 | 4 | 50 | 204 | 27 | 180 | 4.68e-29 | 116 |
Msa0708510 | AT5G60490.1 | 57.718 | 149 | 57 | 3 | 518 | 664 | 39 | 183 | 6.28e-46 | 164 |
Msa0708510 | AT5G60490.1 | 53.788 | 132 | 50 | 4 | 231 | 355 | 50 | 177 | 2.67e-32 | 126 |
Msa0708510 | AT5G60490.1 | 51.128 | 133 | 55 | 3 | 73 | 196 | 46 | 177 | 8.50e-32 | 124 |
Msa0708510 | AT2G20520.1 | 41.451 | 193 | 103 | 6 | 491 | 680 | 15 | 200 | 4.97e-30 | 119 |
Msa0708510 | AT2G20520.1 | 40.764 | 157 | 79 | 5 | 229 | 374 | 47 | 200 | 3.19e-19 | 88.2 |
Msa0708510 | AT2G20520.1 | 43.411 | 129 | 61 | 4 | 77 | 194 | 49 | 176 | 3.47e-17 | 82.4 |
Msa0708510 | AT5G44130.1 | 40.719 | 167 | 92 | 4 | 517 | 680 | 35 | 197 | 1.25e-26 | 109 |
Msa0708510 | AT5G44130.1 | 42.105 | 133 | 66 | 3 | 72 | 194 | 42 | 173 | 1.52e-20 | 92.0 |
Msa0708510 | AT5G44130.1 | 38.710 | 155 | 80 | 7 | 231 | 374 | 47 | 197 | 3.27e-17 | 82.4 |
Msa0708510 | AT1G03870.1 | 34.842 | 221 | 123 | 6 | 517 | 735 | 38 | 239 | 2.42e-26 | 108 |
Msa0708510 | AT1G03870.1 | 39.394 | 132 | 70 | 3 | 72 | 194 | 45 | 175 | 3.27e-17 | 82.4 |
Msa0708510 | AT1G03870.1 | 34.066 | 182 | 102 | 8 | 231 | 398 | 50 | 227 | 1.04e-15 | 78.2 |
Msa0708510 | AT3G46550.1 | 30.811 | 185 | 117 | 4 | 505 | 684 | 194 | 372 | 9.02e-17 | 84.0 |
Msa0708510 | AT3G60900.1 | 30.928 | 194 | 119 | 4 | 504 | 695 | 180 | 360 | 8.30e-13 | 71.6 |
Msa0708510 | AT2G04780.1 | 31.333 | 150 | 95 | 4 | 517 | 664 | 45 | 188 | 6.65e-11 | 63.9 |
Msa0708510 | AT2G04780.2 | 31.333 | 150 | 95 | 4 | 517 | 664 | 45 | 188 | 6.65e-11 | 63.9 |
Find 177 sgRNAs with CRISPR-Local
Find 536 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATGTCAATGGTGGGTCCTTT+TGG | 0.235120 | 4_4:+82075562 | None:intergenic |
GCCTCTTGATCTTGTTCTTC+CGG | 0.272392 | 4_4:-82075107 | Msa0708510:CDS |
GCCTCTTGATCTTGTTCTTC+CGG | 0.272392 | 4_4:-82078417 | Msa0708510:CDS |
TAGCAAACTTGCTATTTATC+AGG | 0.275231 | 4_4:-82075146 | Msa0708510:CDS |
TAGCAAACTTGCTATTTATC+AGG | 0.275231 | 4_4:-82078456 | Msa0708510:intron |
TTCGAACTTGATACATATTC+AGG | 0.279696 | 4_4:+82081458 | None:intergenic |
GAATTCTCTTTCTCAGCTTT+AGG | 0.296501 | 4_4:+82081194 | None:intergenic |
CAGATTAATGTGACTGCATA+TGG | 0.308276 | 4_4:-82081377 | Msa0708510:CDS |
GGTGCTGTTGCTGTTGTTGC+TGG | 0.314474 | 4_4:+82075658 | None:intergenic |
CCTGCTGATGTTTCTGCTGC+AGG | 0.329762 | 4_4:-82078269 | Msa0708510:CDS |
GGTGCTGGAGCAGGTGTTGA+AGG | 0.331645 | 4_4:+82081773 | None:intergenic |
GTTGCTGTTGTTGCTGGTAA+TGG | 0.333085 | 4_4:+82075664 | None:intergenic |
GAGGAACCCTGCTTTGAGTT+TGG | 0.336926 | 4_4:+82075387 | None:intergenic |
GAGGAACCCTGCTTTGAGTT+TGG | 0.336926 | 4_4:+82078697 | None:intergenic |
TCTTGGTTTCCTGACGAATC+AGG | 0.343060 | 4_4:+82081704 | None:intergenic |
AGAGTTGGGCTAATGTGGTT+GGG | 0.351783 | 4_4:+82075752 | None:intergenic |
GCAGTTAATGCTACCGTTAC+TGG | 0.358591 | 4_4:-82075184 | Msa0708510:CDS |
TTGGAGAATGCAGAATCTTC+TGG | 0.359282 | 4_4:+82075406 | None:intergenic |
TTGGAGAATGCAGAATCTTC+TGG | 0.359282 | 4_4:+82078716 | None:intergenic |
GTTGGTGGAGTTGTTCTATA+AGG | 0.359667 | 4_4:-82074893 | None:intergenic |
CCTGCTGATGTTTCTGCTGC+AGG | 0.360987 | 4_4:-82074959 | Msa0708510:CDS |
TTTGGCTCCTGCACCGGCTA+AGG | 0.362528 | 4_4:-82075071 | Msa0708510:CDS |
CAGTGGCAATCAAGTTAGTA+TGG | 0.363282 | 4_4:-82075215 | Msa0708510:CDS |
TCCGGCTAAGGCTCCAGCTT+TGG | 0.363612 | 4_4:-82075089 | Msa0708510:CDS |
GCAGTTAATGCTACCGTTAC+CGG | 0.364782 | 4_4:-82078494 | Msa0708510:CDS |
TCACCGGCTTGTGTTTGAAC+AGG | 0.366430 | 4_4:+82075271 | None:intergenic |
TCACCGGCTTGTGTTTGAAC+AGG | 0.366430 | 4_4:+82078581 | None:intergenic |
GAGAGTTGGGCTAATGTGGT+TGG | 0.368809 | 4_4:+82075751 | None:intergenic |
GTTAACCCTCCTGAACTTGA+TGG | 0.380393 | 4_4:+82078749 | None:intergenic |
GGTTTGAATTGGTGAGAGTT+GGG | 0.383872 | 4_4:+82075738 | None:intergenic |
CGGTGGCAGTCAAGTTAGTA+TGG | 0.391071 | 4_4:-82078525 | Msa0708510:CDS |
GGGTTTGAATTGGTGAGAGT+TGG | 0.392657 | 4_4:+82075737 | None:intergenic |
TCTGGCTCCGGCGCCAGCTA+AGG | 0.394000 | 4_4:-82078381 | Msa0708510:CDS |
TGCTATTTATCAGGTTGATA+AGG | 0.394299 | 4_4:-82075137 | Msa0708510:CDS |
AATTAGAACGGAGAACCTTT+TGG | 0.395304 | 4_4:+82075519 | None:intergenic |
AGCAGGTTACTTCAACTCCT+TGG | 0.397163 | 4_4:-82081522 | Msa0708510:intron |
GTGAGGGTGATGATATTGTT+GGG | 0.400745 | 4_4:+82075716 | None:intergenic |
TTTGGAATGGGTTTGGTTGG+TGG | 0.406116 | 4_4:-82074908 | Msa0708510:CDS |
TGTGGTAATGCTGGGACTAA+TGG | 0.407871 | 4_4:+82081743 | None:intergenic |
GATTAGTGTGTTGAATGATT+TGG | 0.407894 | 4_4:+82081658 | None:intergenic |
TGCTGCAGGGTCTGTGATGT+GGG | 0.418106 | 4_4:-82078255 | Msa0708510:CDS |
GGTGCACCAGTTGGTGTTGT+TGG | 0.418778 | 4_4:+82075604 | None:intergenic |
TGATCTTGTTCTTCCGGCTA+AGG | 0.420269 | 4_4:-82075101 | Msa0708510:CDS |
TGATCTTGTTCTTCCGGCTA+AGG | 0.420269 | 4_4:-82078411 | Msa0708510:CDS |
GTATCATCGCCATCAAGTTC+AGG | 0.420444 | 4_4:-82078758 | Msa0708510:CDS |
TCCGGCTAAGGCTCCATCTC+TGG | 0.421914 | 4_4:-82078399 | Msa0708510:CDS |
GGTGAGGGTGATGATATTGT+TGG | 0.425491 | 4_4:+82075715 | None:intergenic |
GATATTGTTGGGGTTTGAAT+TGG | 0.430089 | 4_4:+82075727 | None:intergenic |
GCCTTAGCAAGAGCTGGTGC+TGG | 0.431209 | 4_4:+82081218 | None:intergenic |
GCCGGTGCAGGAGCCAAAGC+TGG | 0.431263 | 4_4:+82075076 | None:intergenic |
TGTTTGAACAGGGTTGGTTA+AGG | 0.439720 | 4_4:+82075282 | None:intergenic |
TGTTTGAACAGGGTTGGTTA+AGG | 0.439720 | 4_4:+82078592 | None:intergenic |
TCTGAAAAGGCACCATCATC+TGG | 0.442423 | 4_4:+82081551 | None:intergenic |
CTGCTGCAGGATCTGTGCAT+TGG | 0.442652 | 4_4:-82074946 | Msa0708510:CDS |
GTGCTGGAGCAGGTGTTGAA+GGG | 0.442970 | 4_4:+82081774 | None:intergenic |
AAGGGTTTGTTGCCTAAGGC+TGG | 0.443081 | 4_4:-82075052 | Msa0708510:CDS |
AAGGGTTTGTTGCCTAAGGC+TGG | 0.443081 | 4_4:-82078362 | Msa0708510:CDS |
GTATCATCACCATCAGGTTC+AGG | 0.443291 | 4_4:-82075448 | Msa0708510:CDS |
CTTGTTCCAACAACACCAAC+TGG | 0.444147 | 4_4:-82075610 | Msa0708510:CDS |
GGTGGTGATGCTGTTGTTGA+TGG | 0.445870 | 4_4:+82075685 | None:intergenic |
AGAAGATAGAGGCAAGTAGT+AGG | 0.446057 | 4_4:+82081885 | None:intergenic |
TGATGCTGTTGTTGATGGTA+AGG | 0.449757 | 4_4:+82075690 | None:intergenic |
GGAGCAGGTGTTGAAGGGGT+TGG | 0.451921 | 4_4:+82081779 | None:intergenic |
CTGGCTCCGGCGCCAGCTAA+GGG | 0.452323 | 4_4:-82078380 | Msa0708510:CDS |
CTGCTGCAGGGTCTGTGATG+TGG | 0.454235 | 4_4:-82078256 | Msa0708510:CDS |
AAGAATGTTGATTATGTCAA+TGG | 0.455371 | 4_4:+82075549 | None:intergenic |
GCAGGTTACTTCAACTCCTT+GGG | 0.455965 | 4_4:-82081521 | Msa0708510:intron |
AACAGTGTGAATATTTCAAC+TGG | 0.459076 | 4_4:-82081353 | Msa0708510:CDS |
CAACTGAACGTCACTACTTA+CGG | 0.460289 | 4_4:-82078545 | Msa0708510:CDS |
AGCTAAGGGTTTGTTGCCTA+AGG | 0.460321 | 4_4:-82078366 | Msa0708510:CDS |
TTGGCTCCTGCACCGGCTAA+GGG | 0.463641 | 4_4:-82075070 | Msa0708510:CDS |
AACAAACCCTTAGCCGGTGC+AGG | 0.463951 | 4_4:+82075064 | None:intergenic |
GTAGGTGATTGTGGTAATGC+TGG | 0.464029 | 4_4:+82081734 | None:intergenic |
GCATTCTCCAAACTCAAAGC+AGG | 0.466381 | 4_4:-82075394 | Msa0708510:CDS |
GCATTCTCCAAACTCAAAGC+AGG | 0.466381 | 4_4:-82078704 | Msa0708510:CDS |
GGCTAAGGGTTTGTTGCCTA+AGG | 0.468336 | 4_4:-82075056 | Msa0708510:CDS |
AATTCTTCGGTTGTAGATGA+TGG | 0.470488 | 4_4:-82075022 | Msa0708510:CDS |
GACGAATCAGGATTTGTTGT+AGG | 0.471829 | 4_4:+82081716 | None:intergenic |
GAGTTGGGCTAATGTGGTTG+GGG | 0.472510 | 4_4:+82075753 | None:intergenic |
GTAGATGATGGTAGCGGTGC+TGG | 0.479324 | 4_4:-82075010 | Msa0708510:CDS |
CATTAATCTGAAATCCTTGT+GGG | 0.483229 | 4_4:+82081390 | None:intergenic |
CTGCTGATGTTTCTGCTGCA+GGG | 0.487153 | 4_4:-82078268 | Msa0708510:CDS |
TCCAGCTTTGGCTCCTGCAC+CGG | 0.487588 | 4_4:-82075077 | Msa0708510:CDS |
TTAGGTGCCTTAGCAAGAGC+TGG | 0.489973 | 4_4:+82081212 | None:intergenic |
TTAGGCAACAAACCCTTAGC+TGG | 0.492766 | 4_4:+82078368 | None:intergenic |
GTCTATCAGTGAGGGAGTTG+AGG | 0.498053 | 4_4:+82075368 | None:intergenic |
GTCTATCAGTGAGGGAGTTG+AGG | 0.498053 | 4_4:+82078678 | None:intergenic |
TGAGGGTGATGATATTGTTG+GGG | 0.500322 | 4_4:+82075717 | None:intergenic |
AACAAACCCTTAGCTGGCGC+CGG | 0.504015 | 4_4:+82078374 | None:intergenic |
AGCGGAACTGTGCTTAATCC+TGG | 0.504963 | 4_4:+82075631 | None:intergenic |
TGGTGAGAGTTGGGCTAATG+TGG | 0.506138 | 4_4:+82075747 | None:intergenic |
GGCTTGTGTTTGAACAGGGT+TGG | 0.506531 | 4_4:+82075276 | None:intergenic |
GGCTTGTGTTTGAACAGGGT+TGG | 0.506531 | 4_4:+82078586 | None:intergenic |
GTTGATGGTAAGGGTGGTGA+GGG | 0.507310 | 4_4:+82075700 | None:intergenic |
CACCGGCTTGTGTTTGAACA+GGG | 0.508119 | 4_4:+82075272 | None:intergenic |
CACCGGCTTGTGTTTGAACA+GGG | 0.508119 | 4_4:+82078582 | None:intergenic |
GTAGACGATGGCAGTGGTGC+TGG | 0.509847 | 4_4:-82078320 | Msa0708510:CDS |
GGATTTGTTGTAGGTGATTG+TGG | 0.513333 | 4_4:+82081725 | None:intergenic |
ACAATTCTTGCACCAGATGA+TGG | 0.514841 | 4_4:-82081563 | Msa0708510:intron |
GCCAAAGCTGGAGCCTTAGC+CGG | 0.517768 | 4_4:+82075088 | None:intergenic |
GCCAGAGATGGAGCCTTAGC+CGG | 0.520251 | 4_4:+82078398 | None:intergenic |
GCTGGCGCCGGAGCCAGAGA+TGG | 0.521879 | 4_4:+82078386 | None:intergenic |
AACGGTAGCATTAACTGCTC+CGG | 0.527378 | 4_4:+82075189 | None:intergenic |
TGTTGATGGTAAGGGTGGTG+AGG | 0.528646 | 4_4:+82075699 | None:intergenic |
CAGCTAGTATCATCACCATC+AGG | 0.530331 | 4_4:-82075454 | Msa0708510:CDS |
TAAGGCTCCATCTCTGGCTC+CGG | 0.530879 | 4_4:-82078393 | Msa0708510:CDS |
AGTGGTGATTGAGAAGATAG+AGG | 0.531658 | 4_4:+82081874 | None:intergenic |
CCCACCAAAGCAATCCCAAA+AGG | 0.532318 | 4_4:-82075577 | Msa0708510:CDS |
TTTGTGTTGTCTTGAGCAAA+CGG | 0.534377 | 4_4:+82081636 | None:intergenic |
AACGGTAGCATTAACTGCTC+CGG | 0.540707 | 4_4:+82078499 | None:intergenic |
AAATAGAAACAAACGAAGCA+AGG | 0.540997 | 4_4:+82075317 | None:intergenic |
TCCAGCACCAGCTCTTGCTA+AGG | 0.542557 | 4_4:-82081219 | Msa0708510:CDS |
AGCGTAAACGATTCCAGTGA+TGG | 0.545525 | 4_4:+82081316 | None:intergenic |
TTTGGAATGAGTTTGGTTGG+TGG | 0.550464 | 4_4:-82078218 | Msa0708510:CDS |
TTACAAGCTGTGCATTGACT+TGG | 0.551173 | 4_4:+82081606 | None:intergenic |
AGTGGTGCTGGTAGTGATGA+TGG | 0.554877 | 4_4:-82078308 | Msa0708510:CDS |
TGCTGGAGCAGGTGTTGAAG+GGG | 0.559876 | 4_4:+82081775 | None:intergenic |
AGCGGTGCTGGCAGTGATGA+TGG | 0.560075 | 4_4:-82074998 | Msa0708510:CDS |
TTAGGCAACAAACCCTTAGC+CGG | 0.560846 | 4_4:+82075058 | None:intergenic |
ATAAATAGCAAGTTTGCTAT+CGG | 0.562446 | 4_4:+82075150 | None:intergenic |
ATAAATAGCAAGTTTGCTAT+CGG | 0.562446 | 4_4:+82078460 | None:intergenic |
ATACTAGCTGCGAGTTGAGT+TGG | 0.564006 | 4_4:+82075467 | None:intergenic |
ATACTAGCTGCGAGTTGAGT+TGG | 0.564006 | 4_4:+82078777 | None:intergenic |
GGTATAAACAGTACCGGTAA+CGG | 0.565166 | 4_4:+82078481 | None:intergenic |
GTTGGTGTTGTTGGAACAAG+CGG | 0.574823 | 4_4:+82075613 | None:intergenic |
ACATTAATCTGAAATCCTTG+TGG | 0.574915 | 4_4:+82081389 | None:intergenic |
AACCCTGTTCAAACACAAGC+CGG | 0.576254 | 4_4:-82075274 | Msa0708510:CDS |
AACCCTGTTCAAACACAAGC+CGG | 0.576254 | 4_4:-82078584 | Msa0708510:CDS |
AATTGCTAGAAGAAAGAATG+AGG | 0.576326 | 4_4:+82075786 | None:intergenic |
AGCTGGTGATTGAGCTAAAG+TGG | 0.578327 | 4_4:+82081856 | None:intergenic |
GCTGTTGTTGATGGTAAGGG+TGG | 0.581658 | 4_4:+82075694 | None:intergenic |
GCTGTTGTTGCTGGTAATGG+TGG | 0.582499 | 4_4:+82075667 | None:intergenic |
TAGGTGATTGTGGTAATGCT+GGG | 0.582717 | 4_4:+82081735 | None:intergenic |
CACAAGCCGGTGATGATGCT+AGG | 0.584174 | 4_4:-82075261 | Msa0708510:CDS |
CACAAGCCGGTGATGATGCT+AGG | 0.584174 | 4_4:-82078571 | Msa0708510:CDS |
TCGGTTGTAGACGATGGCAG+TGG | 0.591876 | 4_4:-82078326 | Msa0708510:CDS |
GTTGTTGATACAACCATCAC+TGG | 0.593007 | 4_4:-82081329 | Msa0708510:CDS |
AATCAAGTTAGTATGGCTAC+CGG | 0.593663 | 4_4:-82075208 | Msa0708510:CDS |
TCGGTTGTAGATGATGGTAG+CGG | 0.599850 | 4_4:-82075016 | Msa0708510:CDS |
ACAGCAACAGCACCATCACC+AGG | 0.599988 | 4_4:-82075649 | Msa0708510:CDS |
AGTCAAGTTAGTATGGCTAC+CGG | 0.601147 | 4_4:-82078518 | Msa0708510:CDS |
GATGCTGTTGTTGATGGTAA+GGG | 0.606751 | 4_4:+82075691 | None:intergenic |
GCTATCGGTATAAACAGTAC+CGG | 0.606873 | 4_4:+82078475 | None:intergenic |
CTAGCTAGTGATAGCCCACA+AGG | 0.607212 | 4_4:-82081404 | Msa0708510:CDS |
CCTGCAGCAGAAACATCAGC+AGG | 0.607919 | 4_4:+82074959 | None:intergenic |
TCATCACCATCAGGTTCAGG+AGG | 0.610251 | 4_4:-82075445 | Msa0708510:CDS |
CATTCTCCAAACTCAAAGCA+GGG | 0.610410 | 4_4:-82075393 | Msa0708510:CDS |
CATTCTCCAAACTCAAAGCA+GGG | 0.610410 | 4_4:-82078703 | Msa0708510:CDS |
TTTGAGAAGACGAATTAGAA+CGG | 0.612652 | 4_4:+82075507 | None:intergenic |
GCCGGAAGAACAAGATCAAG+AGG | 0.613702 | 4_4:+82075106 | None:intergenic |
GCCGGAAGAACAAGATCAAG+AGG | 0.613702 | 4_4:+82078416 | None:intergenic |
CCTGCAGCAGAAACATCAGC+AGG | 0.614736 | 4_4:+82078269 | None:intergenic |
AATGTTGATTATGTCAATGG+TGG | 0.616748 | 4_4:+82075552 | None:intergenic |
AATAGAAACAAACGAAGCAA+GGG | 0.620497 | 4_4:+82075318 | None:intergenic |
TTGAAGCCTAGCATCATCAC+CGG | 0.621788 | 4_4:+82075255 | None:intergenic |
TTGAAGCCTAGCATCATCAC+CGG | 0.621788 | 4_4:+82078565 | None:intergenic |
TGCTAGAAGAAAGAATGAGG+TGG | 0.621900 | 4_4:+82075789 | None:intergenic |
TCATCGCCATCAAGTTCAGG+AGG | 0.622735 | 4_4:-82078755 | Msa0708510:CDS |
TGATCAGACTCAGGCACACA+AGG | 0.622744 | 4_4:-82081156 | Msa0708510:CDS |
AGATGATGATGATCAGACTC+AGG | 0.626792 | 4_4:-82081165 | Msa0708510:CDS |
CAGTGATGATGGTGATGGAA+AGG | 0.627687 | 4_4:-82074987 | Msa0708510:CDS |
ACTGTGCTTAATCCTGGTGA+TGG | 0.634396 | 4_4:+82075637 | None:intergenic |
AAATCGAAACGAATGAAGCG+AGG | 0.637672 | 4_4:+82078627 | None:intergenic |
GGTATAAACAGTACCAGTAA+CGG | 0.640082 | 4_4:+82075171 | None:intergenic |
GCTGGCAGTGATGATGGTGA+TGG | 0.645590 | 4_4:-82074992 | Msa0708510:CDS |
CACTAGCTAGTGTCAACACA+GGG | 0.648522 | 4_4:+82081417 | None:intergenic |
AATCGAAACGAATGAAGCGA+GGG | 0.648536 | 4_4:+82078628 | None:intergenic |
GTTAACCCTCCTGAACCTGA+TGG | 0.664853 | 4_4:+82075439 | None:intergenic |
TAGTGATGATGGTGATGGCA+AGG | 0.668905 | 4_4:-82078297 | Msa0708510:CDS |
AATTCATCGGTTGTAGACGA+TGG | 0.674617 | 4_4:-82078332 | Msa0708510:CDS |
GCTGGTAGTGATGATGGTGA+TGG | 0.674633 | 4_4:-82078302 | Msa0708510:CDS |
CTGAACGTCACTACTTACAG+TGG | 0.677815 | 4_4:-82075232 | Msa0708510:CDS |
ATGTTGATTATGTCAATGGT+GGG | 0.681774 | 4_4:+82075553 | None:intergenic |
TCACTAGCTAGTGTCAACAC+AGG | 0.685638 | 4_4:+82081416 | None:intergenic |
CATCACCATCAGGTTCAGGA+GGG | 0.700637 | 4_4:-82075444 | Msa0708510:CDS |
CATCGCCATCAAGTTCAGGA+GGG | 0.702614 | 4_4:-82078754 | Msa0708510:CDS |
CTGAACGTCACTACTTACGG+TGG | 0.722980 | 4_4:-82078542 | Msa0708510:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATATCATTACTTTTAAAAAT+TGG | - | chr4_4:82076615-82076634 | Msa0708510:intron | 10.0% |
!!! | TTAAGAATTAATTTCAATTT+TGG | + | chr4_4:82076996-82077015 | None:intergenic | 10.0% |
!!! | TGATCATTTTTTTTTTTTTA+AGG | + | chr4_4:82078961-82078980 | None:intergenic | 10.0% |
!! | AGTTTATGAATAAATTAAAT+TGG | - | chr4_4:82079716-82079735 | Msa0708510:intron | 10.0% |
!!! | TTACTTATATTTTGTAAAGA+GGG | + | chr4_4:82076113-82076132 | None:intergenic | 15.0% |
!!! | TTTACTTATATTTTGTAAAG+AGG | + | chr4_4:82076114-82076133 | None:intergenic | 15.0% |
!!! | TATTTCTTTTAAGTTGAAAT+AGG | + | chr4_4:82076724-82076743 | None:intergenic | 15.0% |
!! | CTTAAAAGAAATATTACTTA+CGG | - | chr4_4:82076731-82076750 | Msa0708510:intron | 15.0% |
!! | TAATGATAATATAATATGGT+TGG | + | chr4_4:82077298-82077317 | None:intergenic | 15.0% |
!!! | AAATTAATGATTGGTTAATT+AGG | + | chr4_4:82077537-82077556 | None:intergenic | 15.0% |
!!! | TGTAATTTGTATTTCTTTTA+TGG | - | chr4_4:82078823-82078842 | Msa0708510:CDS | 15.0% |
!! | CAAAATTTATTGATAAAAAG+AGG | + | chr4_4:82079671-82079690 | None:intergenic | 15.0% |
!! | ATCTTATTAAGATATCAATT+TGG | - | chr4_4:82080181-82080200 | Msa0708510:intron | 15.0% |
!!! | AAATTAATGATTGGTTAATT+AGG | + | chr4_4:82077537-82077556 | None:intergenic | 15.0% |
!!! | ACTATTTTGTGACAATATTT+GGG | + | chr4_4:82076589-82076608 | None:intergenic | 20.0% |
!! | AATCTTAATGAAATAGTCAA+AGG | - | chr4_4:82076920-82076939 | Msa0708510:intron | 20.0% |
!! | TCATTGTAATTGTTAATCAA+AGG | + | chr4_4:82077025-82077044 | None:intergenic | 20.0% |
!!! | AAAAATCACTATTACTGTTT+TGG | - | chr4_4:82077084-82077103 | Msa0708510:intron | 20.0% |
!! | AATCTAAGAAACTTTATATC+TGG | - | chr4_4:82077138-82077157 | Msa0708510:intron | 20.0% |
!!! | TCAATATAATTTAGTTCCAT+AGG | + | chr4_4:82077213-82077232 | None:intergenic | 20.0% |
!! | TAATATAATATGGTTGGAAA+GGG | + | chr4_4:82077292-82077311 | None:intergenic | 20.0% |
!! | ATAATATAATATGGTTGGAA+AGG | + | chr4_4:82077293-82077312 | None:intergenic | 20.0% |
!! | CATAAAAAAAACCAAAAATG+AGG | - | chr4_4:82077659-82077678 | Msa0708510:intron | 20.0% |
!!! | TTTTTTTAGTTGTGATTTTG+AGG | - | chr4_4:82078663-82078682 | Msa0708510:intron | 20.0% |
!!! | GTATTTCTTTTATGGATTAT+TGG | - | chr4_4:82078831-82078850 | Msa0708510:intron | 20.0% |
!! | AAAAAAAAAATGATCAAGCA+TGG | - | chr4_4:82078965-82078984 | Msa0708510:intron | 20.0% |
!! | AAAATGAAAATCTACAAAGA+TGG | - | chr4_4:82079442-82079461 | Msa0708510:intron | 20.0% |
!!! | TTGGTTTTTAGGTAAAAATT+CGG | - | chr4_4:82079502-82079521 | Msa0708510:intron | 20.0% |
!!! | ATAGAGTTAGAACTAAATTT+TGG | - | chr4_4:82079583-82079602 | Msa0708510:intron | 20.0% |
!! | AAATCATTGAACTTAACTAT+GGG | - | chr4_4:82079914-82079933 | Msa0708510:intron | 20.0% |
!! | TCCTAATTTGACATAATTTA+TGG | - | chr4_4:82080277-82080296 | Msa0708510:intron | 20.0% |
!!! | ATCATAATTAGATAACTTGT+CGG | + | chr4_4:82080444-82080463 | None:intergenic | 20.0% |
!!! | TTGATTTCTTCTTTTATTTC+AGG | - | chr4_4:82080491-82080510 | Msa0708510:intron | 20.0% |
!! | TACATATTAATACACCTTAT+AGG | - | chr4_4:82080680-82080699 | Msa0708510:intron | 20.0% |
!!! | GCATCATATTTTTCATTTTT+GGG | + | chr4_4:82080982-82081001 | None:intergenic | 20.0% |
!!! | TGCATCATATTTTTCATTTT+TGG | + | chr4_4:82080983-82081002 | None:intergenic | 20.0% |
! | TTAGAATCTTGATTATGTCT+TGG | + | chr4_4:82075122-82075141 | None:intergenic | 25.0% |
! | TGCTATATATCATGTGAATA+AGG | - | chr4_4:82075524-82075543 | Msa0708510:CDS | 25.0% |
! | ATGTGACCTTAAATTTGATT+GGG | + | chr4_4:82076226-82076245 | None:intergenic | 25.0% |
! | TTTAAAAGTTGCGCTAAAAA+TGG | + | chr4_4:82076519-82076538 | None:intergenic | 25.0% |
!!! | TTTTTAGCGCAACTTTTAAA+CGG | - | chr4_4:82076519-82076538 | Msa0708510:intron | 25.0% |
!! | CACTATTTTGTGACAATATT+TGG | + | chr4_4:82076590-82076609 | None:intergenic | 25.0% |
! | AGCGTATTATATTGTTACAA+TGG | + | chr4_4:82076652-82076671 | None:intergenic | 25.0% |
!!! | TGAAACTTTTTCCTTTCAAA+TGG | + | chr4_4:82076691-82076710 | None:intergenic | 25.0% |
!! | GTATTAATTAAAGAGCACAA+CGG | + | chr4_4:82076762-82076781 | None:intergenic | 25.0% |
! | TTAATGAAATAGTCAAAGGA+GGG | - | chr4_4:82076924-82076943 | Msa0708510:intron | 25.0% |
! | GAAACTTTATATCTGGTATT+AGG | - | chr4_4:82077145-82077164 | Msa0708510:intron | 25.0% |
!! | GTTTAGTATTTCTATCAACT+TGG | + | chr4_4:82077249-82077268 | None:intergenic | 25.0% |
! | AATATAATATGGTTGGAAAG+GGG | + | chr4_4:82077291-82077310 | None:intergenic | 25.0% |
! | TGTAAGATTTGTGAATGATT+AGG | + | chr4_4:82077433-82077452 | None:intergenic | 25.0% |
!! | TATGTGTTGTTAGAAATTGT+TGG | + | chr4_4:82077643-82077662 | None:intergenic | 25.0% |
!! | AAGAATGTTGATTATGTCAA+TGG | + | chr4_4:82077950-82077969 | None:intergenic | 25.0% |
!! | AATTAGAACAGAAAACCTTT+TGG | + | chr4_4:82077980-82077999 | None:intergenic | 25.0% |
!! | AAAGGTTTTCTGTTCTAATT+CGG | - | chr4_4:82077980-82077999 | Msa0708510:intron | 25.0% |
!!! | ATAAATAGCAAGTTTGCTAT+CGG | + | chr4_4:82078349-82078368 | None:intergenic | 25.0% |
! | GGATGAATAAACAATATTGA+TGG | - | chr4_4:82078627-82078646 | Msa0708510:CDS | 25.0% |
!! | TGCTATTTGTTTGTAGAATA+GGG | - | chr4_4:82078736-82078755 | Msa0708510:CDS | 25.0% |
! | ATTACAAGTTACCAAACAAA+AGG | + | chr4_4:82078809-82078828 | None:intergenic | 25.0% |
! | ATAAAGATAAAAGGAGATCA+CGG | + | chr4_4:82079028-82079047 | None:intergenic | 25.0% |
! | GTTGCTAAGATAAAGATAAA+AGG | + | chr4_4:82079037-82079056 | None:intergenic | 25.0% |
! | TTATCTTTATCTTAGCAACA+AGG | - | chr4_4:82079038-82079057 | Msa0708510:intron | 25.0% |
!!! | GATTTTTTCTTGTAGAAAGA+TGG | + | chr4_4:82079167-82079186 | None:intergenic | 25.0% |
! | TATGAAAATTTCAAATGCCT+TGG | - | chr4_4:82079274-82079293 | Msa0708510:intron | 25.0% |
!! | ATATTGACTATTTGGGAAAT+TGG | - | chr4_4:82079390-82079409 | Msa0708510:intron | 25.0% |
!!! | TGGTTTTTAGGTAAAAATTC+GGG | - | chr4_4:82079503-82079522 | Msa0708510:intron | 25.0% |
! | TTCCAATAGATTATATGCTA+AGG | - | chr4_4:82079558-82079577 | Msa0708510:intron | 25.0% |
!!! | TAGAACTAAATTTTGGTTGA+AGG | - | chr4_4:82079590-82079609 | Msa0708510:intron | 25.0% |
! | GAAATCATTGAACTTAACTA+TGG | - | chr4_4:82079913-82079932 | Msa0708510:intron | 25.0% |
! | AATCATTGAACTTAACTATG+GGG | - | chr4_4:82079915-82079934 | Msa0708510:intron | 25.0% |
! | TTAATGTCCCTATTTAACAT+TGG | - | chr4_4:82080108-82080127 | Msa0708510:intron | 25.0% |
! | TAATGTCCCTATTTAACATT+GGG | - | chr4_4:82080109-82080128 | Msa0708510:intron | 25.0% |
! | TTATTCCCCAATGTTAAATA+GGG | + | chr4_4:82080118-82080137 | None:intergenic | 25.0% |
! | TTTATTCCCCAATGTTAAAT+AGG | + | chr4_4:82080119-82080138 | None:intergenic | 25.0% |
! | ACTAACATAATGAAGAATTG+AGG | - | chr4_4:82080142-82080161 | Msa0708510:intron | 25.0% |
! | GCCATAAATTATGTCAAATT+AGG | + | chr4_4:82080281-82080300 | None:intergenic | 25.0% |
! | TGAATGTGATTATACATTGA+TGG | - | chr4_4:82080302-82080321 | Msa0708510:intron | 25.0% |
! | ACAATTCAGAAAAACTTTCA+AGG | + | chr4_4:82080357-82080376 | None:intergenic | 25.0% |
! | ATTAGAAGATGCGTTTAATT+AGG | + | chr4_4:82080546-82080565 | None:intergenic | 25.0% |
! | ATAGTATTGTAACTGATAAG+TGG | + | chr4_4:82080746-82080765 | None:intergenic | 25.0% |
!! | AAGAATGTTGATTATGTCAA+TGG | + | chr4_4:82077950-82077969 | None:intergenic | 25.0% |
!!! | ATAAATAGCAAGTTTGCTAT+CGG | + | chr4_4:82078349-82078368 | None:intergenic | 25.0% |
!!! | AATGTTGTTGTTTTTGGAAT+GGG | - | chr4_4:82078576-82078595 | Msa0708510:CDS | 25.0% |
GATTAGTGTGTTGAATGATT+TGG | + | chr4_4:82075151-82075170 | None:intergenic | 30.0% | |
CAGCTTGTAACTACAAAAAA+TGG | - | chr4_4:82075213-82075232 | Msa0708510:CDS | 30.0% | |
CTTGTAACTACAAAAAATGG+AGG | - | chr4_4:82075216-82075235 | Msa0708510:CDS | 30.0% | |
TTCGAACTTGATACATATTC+AGG | + | chr4_4:82075351-82075370 | None:intergenic | 30.0% | |
! | CATTAATCTGAAATCCTTGT+GGG | + | chr4_4:82075419-82075438 | None:intergenic | 30.0% |
! | ACATTAATCTGAAATCCTTG+TGG | + | chr4_4:82075420-82075439 | None:intergenic | 30.0% |
AACAGTGTGAATATTTCAAC+TGG | - | chr4_4:82075453-82075472 | Msa0708510:CDS | 30.0% | |
GAATAAGGTTCTTATTCCTT+TGG | - | chr4_4:82075539-82075558 | Msa0708510:CDS | 30.0% | |
TTAGGCTTAACAAAATCCAA+AGG | + | chr4_4:82075558-82075577 | None:intergenic | 30.0% | |
ATGCATGTTATTCAAGCTAA+TGG | + | chr4_4:82075688-82075707 | None:intergenic | 30.0% | |
! | ATTAGCTTGAATAACATGCA+TGG | - | chr4_4:82075687-82075706 | Msa0708510:CDS | 30.0% |
!! | TCATTCTTGTTCTGGAAATA+TGG | + | chr4_4:82075808-82075827 | None:intergenic | 30.0% |
TGCTTATCTTTCTTTCTTCT+TGG | - | chr4_4:82075847-82075866 | Msa0708510:intron | 30.0% | |
! | AAATGCATAAAGTTTAGCTC+AGG | + | chr4_4:82076018-82076037 | None:intergenic | 30.0% |
AATGTTCAGAATCTTAGTCT+GGG | - | chr4_4:82076048-82076067 | Msa0708510:intron | 30.0% | |
GATGTGACCTTAAATTTGAT+TGG | + | chr4_4:82076227-82076246 | None:intergenic | 30.0% | |
TTTAGCATGTGAGTATGAAT+TGG | + | chr4_4:82076474-82076493 | None:intergenic | 30.0% | |
CTTAATGAAATAGTCAAAGG+AGG | - | chr4_4:82076923-82076942 | Msa0708510:intron | 30.0% | |
TTCAAACTTGAGAGTGATAA+TGG | + | chr4_4:82077061-82077080 | None:intergenic | 30.0% | |
! | TAGTATTTCTATCAACTTGG+AGG | + | chr4_4:82077246-82077265 | None:intergenic | 30.0% |
TGTTACAACTTACAATCAGT+TGG | + | chr4_4:82077335-82077354 | None:intergenic | 30.0% | |
CATAGTGTGATAATTAGTGA+GGG | + | chr4_4:82077457-82077476 | None:intergenic | 30.0% | |
TCATAGTGTGATAATTAGTG+AGG | + | chr4_4:82077458-82077477 | None:intergenic | 30.0% | |
! | ATCTTATTTGCCTATCATGA+AGG | + | chr4_4:82077491-82077510 | None:intergenic | 30.0% |
!! | GTGCAATGTTTTTATCAGAA+AGG | + | chr4_4:82077515-82077534 | None:intergenic | 30.0% |
GGAGATGGAAAATTAATGAT+TGG | + | chr4_4:82077546-82077565 | None:intergenic | 30.0% | |
! | TGCATGATATTCCTCATTTT+TGG | + | chr4_4:82077673-82077692 | None:intergenic | 30.0% |
AATTGCTAGAAGAAGAAATG+AGG | + | chr4_4:82077713-82077732 | None:intergenic | 30.0% | |
! | ATGTTGATTATGTCAATGGT+GGG | + | chr4_4:82077946-82077965 | None:intergenic | 30.0% |
! | AATGTTGATTATGTCAATGG+TGG | + | chr4_4:82077947-82077966 | None:intergenic | 30.0% |
ACATTCTTCAAAAAGCCAAA+AGG | - | chr4_4:82077962-82077981 | Msa0708510:intron | 30.0% | |
! | AACTTTTTGTCTATCAGTGA+GGG | + | chr4_4:82078139-82078158 | None:intergenic | 30.0% |
!! | TAGCAAACTTGCTATTTATC+AGG | - | chr4_4:82078350-82078369 | Msa0708510:CDS | 30.0% |
!! | TGCTATTTATCAGGTTGATA+AGG | - | chr4_4:82078359-82078378 | Msa0708510:CDS | 30.0% |
!!! | TGTTGTTTTTGGAATGAGTT+TGG | - | chr4_4:82078581-82078600 | Msa0708510:CDS | 30.0% |
! | CTGCTATTTGTTTGTAGAAT+AGG | - | chr4_4:82078735-82078754 | Msa0708510:CDS | 30.0% |
! | TCCTATTTGTTCCTTTTGTT+TGG | - | chr4_4:82078795-82078814 | Msa0708510:CDS | 30.0% |
ACCAAACAAAAGGAACAAAT+AGG | + | chr4_4:82078799-82078818 | None:intergenic | 30.0% | |
! | TATAACCGAATTTTGTGACT+CGG | + | chr4_4:82079079-82079098 | None:intergenic | 30.0% |
ACAAAATTCGGTTATAGCAA+AGG | - | chr4_4:82079083-82079102 | Msa0708510:intron | 30.0% | |
! | GTTAACCTTTTCTTAGCAAT+TGG | - | chr4_4:82079134-82079153 | Msa0708510:intron | 30.0% |
CATAACCAATTGCTAAGAAA+AGG | + | chr4_4:82079142-82079161 | None:intergenic | 30.0% | |
TTTACTAGCAAAATCACAAG+TGG | + | chr4_4:82079248-82079267 | None:intergenic | 30.0% | |
! | AGTTTGGCATATTGACTATT+TGG | - | chr4_4:82079382-82079401 | Msa0708510:intron | 30.0% |
! | GTTTGGCATATTGACTATTT+GGG | - | chr4_4:82079383-82079402 | Msa0708510:intron | 30.0% |
ATGAAAATCTACAAAGATGG+CGG | - | chr4_4:82079445-82079464 | Msa0708510:intron | 30.0% | |
ACTCGATAAAAGGTTTATCT+TGG | - | chr4_4:82079477-82079496 | Msa0708510:intron | 30.0% | |
! | TAAAAGGTTTATCTTGGTGT+TGG | - | chr4_4:82079483-82079502 | Msa0708510:intron | 30.0% |
!!! | TTATCTTGGTGTTGGTTTTT+AGG | - | chr4_4:82079491-82079510 | Msa0708510:intron | 30.0% |
AGTCATGTCATTACTATGAA+GGG | - | chr4_4:82079528-82079547 | Msa0708510:intron | 30.0% | |
TGCCTTAGCATATAATCTAT+TGG | + | chr4_4:82079563-82079582 | None:intergenic | 30.0% | |
AAGTGGTACTAAATTTCCAT+GGG | + | chr4_4:82079638-82079657 | None:intergenic | 30.0% | |
ACAATGAAGAAGAAGAATGA+AGG | - | chr4_4:82080013-82080032 | Msa0708510:intron | 30.0% | |
CAATGAAGAAGAAGAATGAA+GGG | - | chr4_4:82080014-82080033 | Msa0708510:intron | 30.0% | |
! | ATGAAGGGTTTCTTTCATTT+TGG | - | chr4_4:82080029-82080048 | Msa0708510:intron | 30.0% |
AATGTCCCTATTTAACATTG+GGG | - | chr4_4:82080110-82080129 | Msa0708510:intron | 30.0% | |
!!! | ACTTTTTGAGACTAAAACGT+TGG | - | chr4_4:82080215-82080234 | Msa0708510:intron | 30.0% |
TTTACTCACATCTTCAAAGA+CGG | - | chr4_4:82080407-82080426 | Msa0708510:intron | 30.0% | |
AGGTAAGATTTGTGTATGAT+AGG | + | chr4_4:82080717-82080736 | None:intergenic | 30.0% | |
! | TGCAATGCTTTTATCAGAAA+TGG | + | chr4_4:82080823-82080842 | None:intergenic | 30.0% |
! | CATTTTATATCTTAGGAGGA+TGG | + | chr4_4:82080869-82080888 | None:intergenic | 30.0% |
! | GTTGCATTTTATATCTTAGG+AGG | + | chr4_4:82080873-82080892 | None:intergenic | 30.0% |
TTTGAACCGTTGTTTAGAAA+TGG | + | chr4_4:82080956-82080975 | None:intergenic | 30.0% | |
AATTGCTAGAAGAAAGAATG+AGG | + | chr4_4:82081023-82081042 | None:intergenic | 30.0% | |
! | ATGTTGATTATGTCAATGGT+GGG | + | chr4_4:82077946-82077965 | None:intergenic | 30.0% |
! | AATGTTGATTATGTCAATGG+TGG | + | chr4_4:82077947-82077966 | None:intergenic | 30.0% |
ACATTCTTCAAAAAGCCAAA+AGG | - | chr4_4:82077962-82077981 | Msa0708510:intron | 30.0% | |
TTTGAGAAGACGAATTAGAA+CGG | + | chr4_4:82081302-82081321 | None:intergenic | 30.0% | |
! | AACTTTTTGTCTATCAGTGA+GGG | + | chr4_4:82078139-82078158 | None:intergenic | 30.0% |
AATAGAAACAAACGAAGCAA+GGG | + | chr4_4:82081491-82081510 | None:intergenic | 30.0% | |
AAATAGAAACAAACGAAGCA+AGG | + | chr4_4:82081492-82081511 | None:intergenic | 30.0% | |
!! | TAGCAAACTTGCTATTTATC+AGG | - | chr4_4:82078350-82078369 | Msa0708510:CDS | 30.0% |
!! | TGCTATTTATCAGGTTGATA+AGG | - | chr4_4:82078359-82078378 | Msa0708510:CDS | 30.0% |
!!! | GAATGTTGTTGTTTTTGGAA+TGG | - | chr4_4:82078575-82078594 | Msa0708510:CDS | 30.0% |
TTTGTGTTGTCTTGAGCAAA+CGG | + | chr4_4:82075173-82075192 | None:intergenic | 35.0% | |
!! | TTTTTGTTGTCTTTCTCCCA+AGG | + | chr4_4:82075304-82075323 | None:intergenic | 35.0% |
CAGATTAATGTGACTGCATA+TGG | - | chr4_4:82075429-82075448 | Msa0708510:CDS | 35.0% | |
GAATTCTCTTTCTCAGCTTT+AGG | + | chr4_4:82075615-82075634 | None:intergenic | 35.0% | |
! | GGCTTGTTTATTCATTGTGT+AGG | - | chr4_4:82075868-82075887 | Msa0708510:intron | 35.0% |
CAATGTTCAGAATCTTAGTC+TGG | - | chr4_4:82076047-82076066 | Msa0708510:intron | 35.0% | |
CAAATGAACTTACCAACACA+GGG | + | chr4_4:82076159-82076178 | None:intergenic | 35.0% | |
!! | GTGTTGGTTTCATGCAAAAA+AGG | - | chr4_4:82076184-82076203 | Msa0708510:intron | 35.0% |
GTCTTAGTGTCATGACTTTA+AGG | - | chr4_4:82076277-82076296 | Msa0708510:intron | 35.0% | |
ACTCATATCTTGTTACTCGT+TGG | + | chr4_4:82076317-82076336 | None:intergenic | 35.0% | |
ACATACTAAACGACATGTAC+CGG | + | chr4_4:82076434-82076453 | None:intergenic | 35.0% | |
!!! | ACTGTTTTGGTAGCTATCAA+TGG | - | chr4_4:82077097-82077116 | Msa0708510:intron | 35.0% |
! | TTGTCTGAAACAGATAGGAA+AGG | + | chr4_4:82077179-82077198 | None:intergenic | 35.0% |
! | TGCAATTGTCTGAAACAGAT+AGG | + | chr4_4:82077184-82077203 | None:intergenic | 35.0% |
TTATTTGCCTATCATGAAGG+TGG | + | chr4_4:82077488-82077507 | None:intergenic | 35.0% | |
! | GCTTTTATAGTTTAGGGAGA+TGG | + | chr4_4:82077561-82077580 | None:intergenic | 35.0% |
!!! | GGGTTGGCTTTTATAGTTTA+GGG | + | chr4_4:82077567-82077586 | None:intergenic | 35.0% |
!!! | AGGGTTGGCTTTTATAGTTT+AGG | + | chr4_4:82077568-82077587 | None:intergenic | 35.0% |
! | CAACTTTTTGTCTATCAGTG+AGG | + | chr4_4:82078140-82078159 | None:intergenic | 35.0% |
!!! | GAATTAGTTTTTCCAGCCTT+AGG | + | chr4_4:82078459-82078478 | None:intergenic | 35.0% |
GGCTGGAAAAACTAATTCAT+CGG | - | chr4_4:82078461-82078480 | Msa0708510:CDS | 35.0% | |
!!! | TGGGTGAATGTTGTTGTTTT+TGG | - | chr4_4:82078570-82078589 | Msa0708510:CDS | 35.0% |
!!! | GTTTTTGGAATGAGTTTGGT+TGG | - | chr4_4:82078585-82078604 | Msa0708510:CDS | 35.0% |
! | GTTGGTGGAATTGTTCTATA+AGG | - | chr4_4:82078603-82078622 | Msa0708510:CDS | 35.0% |
AGGAACGCTCGATTATTATA+CGG | + | chr4_4:82078941-82078960 | None:intergenic | 35.0% | |
ATTCGGTTATAGCAAAGGTA+TGG | - | chr4_4:82079088-82079107 | Msa0708510:intron | 35.0% | |
! | TTCGGTTATAGCAAAGGTAT+GGG | - | chr4_4:82079089-82079108 | Msa0708510:intron | 35.0% |
! | CTCTTTAAGAGTTGAGTGAT+AGG | - | chr4_4:82079186-82079205 | Msa0708510:intron | 35.0% |
AGTTGAGTGATAGGTGAATT+AGG | - | chr4_4:82079195-82079214 | Msa0708510:intron | 35.0% | |
AAATTTCAAATGCCTTGGTG+TGG | - | chr4_4:82079279-82079298 | Msa0708510:intron | 35.0% | |
! | AGATTTTTCCACCTTTGATC+CGG | - | chr4_4:82079330-82079349 | Msa0708510:intron | 35.0% |
! | TATTTTCCTTTCCGGATCAA+AGG | + | chr4_4:82079344-82079363 | None:intergenic | 35.0% |
! | CCTTCTCATATTTTCCTTTC+CGG | + | chr4_4:82079352-82079371 | None:intergenic | 35.0% |
! | AGAAGGTGATGATGTTAGTT+TGG | - | chr4_4:82079366-82079385 | Msa0708510:intron | 35.0% |
TGACTATTTGGGAAATTGGA+AGG | - | chr4_4:82079394-82079413 | Msa0708510:intron | 35.0% | |
ACGAATGATAGAATCTGCAA+CGG | - | chr4_4:82079419-82079438 | Msa0708510:intron | 35.0% | |
GAGTCATGTCATTACTATGA+AGG | - | chr4_4:82079527-82079546 | Msa0708510:intron | 35.0% | |
ATTTCCATGGGAATAAGTAC+AGG | + | chr4_4:82079626-82079645 | None:intergenic | 35.0% | |
CAAGTGGTACTAAATTTCCA+TGG | + | chr4_4:82079639-82079658 | None:intergenic | 35.0% | |
AAAGAGGAACTAAGTACAAG+TGG | + | chr4_4:82079655-82079674 | None:intergenic | 35.0% | |
TTTGGATGAAATTCTCAGGA+TGG | - | chr4_4:82079823-82079842 | Msa0708510:intron | 35.0% | |
GAGTAAACAAGAATCACATC+TGG | + | chr4_4:82080394-82080413 | None:intergenic | 35.0% | |
! | CGTACTTTTAGCCGTAAAAA+AGG | - | chr4_4:82080619-82080638 | Msa0708510:intron | 35.0% |
! | ACTTTTAGCCGTAAAAAAGG+TGG | - | chr4_4:82080622-82080641 | Msa0708510:intron | 35.0% |
! | CTTTTAGCCGTAAAAAAGGT+GGG | - | chr4_4:82080623-82080642 | Msa0708510:intron | 35.0% |
!!! | GTTAGAACCCACCTTTTTTA+CGG | + | chr4_4:82080633-82080652 | None:intergenic | 35.0% |
TTGTAACTGATAAGTGGTGA+GGG | + | chr4_4:82080740-82080759 | None:intergenic | 35.0% | |
ATTGTAACTGATAAGTGGTG+AGG | + | chr4_4:82080741-82080760 | None:intergenic | 35.0% | |
CAAATCTTCTTTGTCTGTCA+TGG | + | chr4_4:82080783-82080802 | None:intergenic | 35.0% | |
GGAGGATGGAAATTAATGAT+TGG | + | chr4_4:82080855-82080874 | None:intergenic | 35.0% | |
! | GGGGTTGCATTTTATATCTT+AGG | + | chr4_4:82080876-82080895 | None:intergenic | 35.0% |
TACTAGTGCTTATTCTTGCT+TGG | + | chr4_4:82080925-82080944 | None:intergenic | 35.0% | |
AACCGTTGTTTAGAAATGGT+GGG | + | chr4_4:82080952-82080971 | None:intergenic | 35.0% | |
GATATTGTTGGGGTTTGAAT+TGG | + | chr4_4:82081082-82081101 | None:intergenic | 35.0% | |
! | AATTAGAACGGAGAACCTTT+TGG | + | chr4_4:82081290-82081309 | None:intergenic | 35.0% |
AGAATCTTCTGGTGCAAAAA+TGG | + | chr4_4:82081392-82081411 | None:intergenic | 35.0% | |
! | CAACTTTTTGTCTATCAGTG+AGG | + | chr4_4:82078140-82078159 | None:intergenic | 35.0% |
AATCAAGTTAGTATGGCTAC+CGG | - | chr4_4:82081598-82081617 | Msa0708510:CDS | 35.0% | |
GGTATAAACAGTACCAGTAA+CGG | + | chr4_4:82081638-82081657 | None:intergenic | 35.0% | |
!! | GAATTTGTTTTTCCAGCCTT+AGG | + | chr4_4:82081769-82081788 | None:intergenic | 35.0% |
GGCTGGAAAAACAAATTCTT+CGG | - | chr4_4:82081771-82081790 | Msa0708510:CDS | 35.0% | |
AATTCTTCGGTTGTAGATGA+TGG | - | chr4_4:82081784-82081803 | Msa0708510:CDS | 35.0% | |
!!! | TGGCTGAATGTTGTTGTTTT+TGG | - | chr4_4:82081880-82081899 | Msa0708510:CDS | 35.0% |
!!! | TGTTGTTTTTGGAATGGGTT+TGG | - | chr4_4:82081891-82081910 | Msa0708510:CDS | 35.0% |
AGAAGATAGAGGCAAGTAGT+AGG | + | chr4_4:82074924-82074943 | None:intergenic | 40.0% | |
AGTGGTGATTGAGAAGATAG+AGG | + | chr4_4:82074935-82074954 | None:intergenic | 40.0% | |
!!! | TTTGTAGGTGCTGGTTTTTC+TGG | + | chr4_4:82074991-82075010 | None:intergenic | 40.0% |
!!! | TTGAAGGGGTTGGTTTTGTA+GGG | + | chr4_4:82075020-82075039 | None:intergenic | 40.0% |
! | TAGGTGATTGTGGTAATGCT+GGG | + | chr4_4:82075074-82075093 | None:intergenic | 40.0% |
!! | GGATTTGTTGTAGGTGATTG+TGG | + | chr4_4:82075084-82075103 | None:intergenic | 40.0% |
!! | GACGAATCAGGATTTGTTGT+AGG | + | chr4_4:82075093-82075112 | None:intergenic | 40.0% |
! | ACAACAAATCCTGATTCGTC+AGG | - | chr4_4:82075093-82075112 | Msa0708510:CDS | 40.0% |
!! | TTACAAGCTGTGCATTGACT+TGG | + | chr4_4:82075203-82075222 | None:intergenic | 40.0% |
ACAATTCTTGCACCAGATGA+TGG | - | chr4_4:82075243-82075262 | Msa0708510:CDS | 40.0% | |
!! | ACCTGCTTTGAGTTCTGAAA+AGG | + | chr4_4:82075271-82075290 | None:intergenic | 40.0% |
GTTGTTGATACAACCATCAC+TGG | - | chr4_4:82075477-82075496 | Msa0708510:CDS | 40.0% | |
! | AGATGATGATGATCAGACTC+AGG | - | chr4_4:82075641-82075660 | Msa0708510:CDS | 40.0% |
CATGCATGGAATATCAGTGT+TGG | - | chr4_4:82075701-82075720 | Msa0708510:CDS | 40.0% | |
!! | ATATCAGTGTTGGTTTCCCT+TGG | - | chr4_4:82075711-82075730 | Msa0708510:CDS | 40.0% |
TGCAAGCAGAGAAATTCCAA+GGG | + | chr4_4:82075730-82075749 | None:intergenic | 40.0% | |
CAACAGCATCATTCTTGTTC+TGG | + | chr4_4:82075816-82075835 | None:intergenic | 40.0% | |
! | CAAGAATGATGCTGTTGCTT+TGG | - | chr4_4:82075819-82075838 | Msa0708510:intron | 40.0% |
AATGACAGAGCAGAACAGAA+CGG | + | chr4_4:82075930-82075949 | None:intergenic | 40.0% | |
CCAAATGAACTTACCAACAC+AGG | + | chr4_4:82076160-82076179 | None:intergenic | 40.0% | |
! | CCTGTGTTGGTAAGTTCATT+TGG | - | chr4_4:82076157-82076176 | Msa0708510:intron | 40.0% |
AAGTTCATTTGGACACGTGT+TGG | - | chr4_4:82076168-82076187 | Msa0708510:intron | 40.0% | |
ACCTTAAATTTGATTGGGCG+AGG | + | chr4_4:82076221-82076240 | None:intergenic | 40.0% | |
TAGTAGACAAGCAACACACA+CGG | + | chr4_4:82076360-82076379 | None:intergenic | 40.0% | |
! | CAAAGGAGGGAGTATAAGAT+TGG | - | chr4_4:82076937-82076956 | Msa0708510:intron | 40.0% |
!! | GTTTTGGTAGCTATCAATGG+TGG | - | chr4_4:82077100-82077119 | Msa0708510:intron | 40.0% |
AACAGATAGGAAAGGATGGA+GGG | + | chr4_4:82077171-82077190 | None:intergenic | 40.0% | |
AAACAGATAGGAAAGGATGG+AGG | + | chr4_4:82077172-82077191 | None:intergenic | 40.0% | |
CTGAAACAGATAGGAAAGGA+TGG | + | chr4_4:82077175-82077194 | None:intergenic | 40.0% | |
GACAATTGCAATGCAACCTA+TGG | - | chr4_4:82077194-82077213 | Msa0708510:intron | 40.0% | |
GGGACGATTCGTTTGTATAT+AGG | + | chr4_4:82077271-82077290 | None:intergenic | 40.0% | |
! | CAAATGTGTGTTGTGTTGCT+TGG | + | chr4_4:82077616-82077635 | None:intergenic | 40.0% |
TGCTAGAAGAAGAAATGAGG+TGG | + | chr4_4:82077710-82077729 | None:intergenic | 40.0% | |
TGATGGAGATGATGTTGTAG+GGG | + | chr4_4:82077782-82077801 | None:intergenic | 40.0% | |
! | GTGATGGAGATGATGTTGTA+GGG | + | chr4_4:82077783-82077802 | None:intergenic | 40.0% |
!! | GATGCTGTTGTTGATGGTAA+GGG | + | chr4_4:82077808-82077827 | None:intergenic | 40.0% |
!! | TGATGCTGTTGTTGATGGTA+AGG | + | chr4_4:82077809-82077828 | None:intergenic | 40.0% |
TTGGAGAATGCAGAATCTTC+TGG | + | chr4_4:82078093-82078112 | None:intergenic | 40.0% | |
CATTCTCCAAACTCAAAGCA+GGG | - | chr4_4:82078103-82078122 | Msa0708510:intron | 40.0% | |
AATCGAAACGAATGAAGCGA+GGG | + | chr4_4:82078181-82078200 | None:intergenic | 40.0% | |
AAATCGAAACGAATGAAGCG+AGG | + | chr4_4:82078182-82078201 | None:intergenic | 40.0% | |
!! | TGTTTGAACAGGGTTGGTTA+AGG | + | chr4_4:82078217-82078236 | None:intergenic | 40.0% |
CAACTGAACGTCACTACTTA+CGG | - | chr4_4:82078261-82078280 | Msa0708510:CDS | 40.0% | |
AGTCAAGTTAGTATGGCTAC+CGG | - | chr4_4:82078288-82078307 | Msa0708510:CDS | 40.0% | |
!! | GGTATAAACAGTACCGGTAA+CGG | + | chr4_4:82078328-82078347 | None:intergenic | 40.0% |
GCTATCGGTATAAACAGTAC+CGG | + | chr4_4:82078334-82078353 | None:intergenic | 40.0% | |
! | AATTCATCGGTTGTAGACGA+TGG | - | chr4_4:82078474-82078493 | Msa0708510:CDS | 40.0% |
! | TTTGGAATGAGTTTGGTTGG+TGG | - | chr4_4:82078588-82078607 | Msa0708510:CDS | 40.0% |
GGTGGAATTGTTCTATAAGG+TGG | - | chr4_4:82078606-82078625 | Msa0708510:CDS | 40.0% | |
GGAACGCTCGATTATTATAC+GGG | + | chr4_4:82078940-82078959 | None:intergenic | 40.0% | |
TGATCAAGCATGGTTATGCT+AGG | - | chr4_4:82078975-82078994 | Msa0708510:intron | 40.0% | |
GATCAAGCATGGTTATGCTA+GGG | - | chr4_4:82078976-82078995 | Msa0708510:intron | 40.0% | |
ATAAAAGGAGATCACGGAGA+AGG | + | chr4_4:82079022-82079041 | None:intergenic | 40.0% | |
GTCTTCCGAGTCACAAAATT+CGG | - | chr4_4:82079071-82079090 | Msa0708510:intron | 40.0% | |
! | TCGGTTATAGCAAAGGTATG+GGG | - | chr4_4:82079090-82079109 | Msa0708510:intron | 40.0% |
GTGATAGGTGAATTAGGACA+TGG | - | chr4_4:82079201-82079220 | Msa0708510:intron | 40.0% | |
GTAACACTATTACCACACCA+AGG | + | chr4_4:82079294-82079313 | None:intergenic | 40.0% | |
TGGTGTGGTAATAGTGTTAC+CGG | - | chr4_4:82079294-82079313 | Msa0708510:intron | 40.0% | |
AAATCTCTAGCAATGTTCCC+CGG | + | chr4_4:82079316-82079335 | None:intergenic | 40.0% | |
CCGGAAAGGAAAATATGAGA+AGG | - | chr4_4:82079349-82079368 | Msa0708510:intron | 40.0% | |
! | AAAATCTACAAAGATGGCGG+AGG | - | chr4_4:82079448-82079467 | Msa0708510:intron | 40.0% |
ACTACCTGTACTTATTCCCA+TGG | - | chr4_4:82079619-82079638 | Msa0708510:intron | 40.0% | |
TGAGTGACGTTTAGAGAAGT+AGG | - | chr4_4:82079768-82079787 | Msa0708510:intron | 40.0% | |
AGAGAAGTAGGATTGAGATG+TGG | - | chr4_4:82079780-82079799 | Msa0708510:intron | 40.0% | |
AAGTAGGATTGAGATGTGGA+GGG | - | chr4_4:82079784-82079803 | Msa0708510:intron | 40.0% | |
! | ACGGTTTGGATGAAATTCTC+AGG | - | chr4_4:82079819-82079838 | Msa0708510:intron | 40.0% |
CATTGAACTTAACTATGGGG+CGG | - | chr4_4:82079918-82079937 | Msa0708510:intron | 40.0% | |
AGGTCTGTATTTCCTTCACA+TGG | + | chr4_4:82079979-82079998 | None:intergenic | 40.0% | |
GGAAATACAGACCTGAAACA+AGG | - | chr4_4:82079985-82080004 | Msa0708510:intron | 40.0% | |
! | CATTGTGAGTTCCTTGTTTC+AGG | + | chr4_4:82079999-82080018 | None:intergenic | 40.0% |
AAACTGAGACTCGAATGAGA+AGG | + | chr4_4:82080077-82080096 | None:intergenic | 40.0% | |
TGCTAGCTCATCAAGATACA+AGG | + | chr4_4:82080597-82080616 | None:intergenic | 40.0% | |
GTTCTAACACTTCATGCAGA+TGG | - | chr4_4:82080645-82080664 | Msa0708510:intron | 40.0% | |
AGGTAGTGTTAGAGCCTATA+AGG | + | chr4_4:82080697-82080716 | None:intergenic | 40.0% | |
CTTCTTTGTCTGTCATGGAA+AGG | + | chr4_4:82080778-82080797 | None:intergenic | 40.0% | |
!! | ATTCTTGCTTGGTGATGTTG+TGG | + | chr4_4:82080914-82080933 | None:intergenic | 40.0% |
CTCCCACCATTTCTAAACAA+CGG | - | chr4_4:82080947-82080966 | Msa0708510:intron | 40.0% | |
GAACCGTTGTTTAGAAATGG+TGG | + | chr4_4:82080953-82080972 | None:intergenic | 40.0% | |
TGCTAGAAGAAAGAATGAGG+TGG | + | chr4_4:82081020-82081039 | None:intergenic | 40.0% | |
GGTTTGAATTGGTGAGAGTT+GGG | + | chr4_4:82081071-82081090 | None:intergenic | 40.0% | |
TGAGGGTGATGATATTGTTG+GGG | + | chr4_4:82081092-82081111 | None:intergenic | 40.0% | |
GTGAGGGTGATGATATTGTT+GGG | + | chr4_4:82081093-82081112 | None:intergenic | 40.0% | |
!! | GATGCTGTTGTTGATGGTAA+GGG | + | chr4_4:82077808-82077827 | None:intergenic | 40.0% |
!! | TGATGCTGTTGTTGATGGTA+AGG | + | chr4_4:82077809-82077828 | None:intergenic | 40.0% |
TTGGAGAATGCAGAATCTTC+TGG | + | chr4_4:82078093-82078112 | None:intergenic | 40.0% | |
CATTCTCCAAACTCAAAGCA+GGG | - | chr4_4:82078103-82078122 | Msa0708510:intron | 40.0% | |
!! | TGTTTGAACAGGGTTGGTTA+AGG | + | chr4_4:82078217-82078236 | None:intergenic | 40.0% |
CAGTGGCAATCAAGTTAGTA+TGG | - | chr4_4:82081591-82081610 | Msa0708510:CDS | 40.0% | |
!!! | GTTTTTGGAATGGGTTTGGT+TGG | - | chr4_4:82081895-82081914 | Msa0708510:CDS | 40.0% |
AGCTGGTGATTGAGCTAAAG+TGG | + | chr4_4:82074953-82074972 | None:intergenic | 45.0% | |
!!! | GCTGGTTTTTCTGGTGCTTT+TGG | + | chr4_4:82074982-82075001 | None:intergenic | 45.0% |
!!! | TTTGTAGGGGCTGGTTTTGT+AGG | + | chr4_4:82075006-82075025 | None:intergenic | 45.0% |
!!! | TGAAGGGGTTGGTTTTGTAG+GGG | + | chr4_4:82075019-82075038 | None:intergenic | 45.0% |
!!! | GTTGAAGGGGTTGGTTTTGT+AGG | + | chr4_4:82075021-82075040 | None:intergenic | 45.0% |
!! | ACTAATGGTTTTGCTGGTGC+TGG | + | chr4_4:82075051-82075070 | None:intergenic | 45.0% |
! | TGTGGTAATGCTGGGACTAA+TGG | + | chr4_4:82075066-82075085 | None:intergenic | 45.0% |
! | GTAGGTGATTGTGGTAATGC+TGG | + | chr4_4:82075075-82075094 | None:intergenic | 45.0% |
TCTTGGTTTCCTGACGAATC+AGG | + | chr4_4:82075105-82075124 | None:intergenic | 45.0% | |
!! | TCTGAAAAGGCACCATCATC+TGG | + | chr4_4:82075258-82075277 | None:intergenic | 45.0% |
! | GCCTTTTCAGAACTCAAAGC+AGG | - | chr4_4:82075267-82075286 | Msa0708510:CDS | 45.0% |
AGCAGGTTACTTCAACTCCT+TGG | - | chr4_4:82075284-82075303 | Msa0708510:CDS | 45.0% | |
GCAGGTTACTTCAACTCCTT+GGG | - | chr4_4:82075285-82075304 | Msa0708510:CDS | 45.0% | |
CACTAGCTAGTGTCAACACA+GGG | + | chr4_4:82075392-82075411 | None:intergenic | 45.0% | |
TCACTAGCTAGTGTCAACAC+AGG | + | chr4_4:82075393-82075412 | None:intergenic | 45.0% | |
AGCGTAAACGATTCCAGTGA+TGG | + | chr4_4:82075493-82075512 | None:intergenic | 45.0% | |
CTGCAAGCAGAGAAATTCCA+AGG | + | chr4_4:82075731-82075750 | None:intergenic | 45.0% | |
AATTTGATTGGGCGAGGCTA+AGG | + | chr4_4:82076215-82076234 | None:intergenic | 45.0% | |
GCCTCGCCCAATCAAATTTA+AGG | - | chr4_4:82076217-82076236 | Msa0708510:intron | 45.0% | |
GAGGAGGGAGTAAGATTTAC+CGG | - | chr4_4:82076412-82076431 | Msa0708510:intron | 45.0% | |
TTCAAATGGATCGCACACGA+AGG | + | chr4_4:82076677-82076696 | None:intergenic | 45.0% | |
TCGTGTGCGATCCATTTGAA+AGG | - | chr4_4:82076677-82076696 | Msa0708510:intron | 45.0% | |
! | TTGGTAGCTATCAATGGTGG+AGG | - | chr4_4:82077103-82077122 | Msa0708510:intron | 45.0% |
TGATGCACCACCTTCATGAT+AGG | - | chr4_4:82077478-82077497 | Msa0708510:intron | 45.0% | |
!! | TGTGTTGCTTGGTAGTGTTG+TGG | + | chr4_4:82077605-82077624 | None:intergenic | 45.0% |
GATGGAGATGATGTTGTAGG+GGG | + | chr4_4:82077781-82077800 | None:intergenic | 45.0% | |
!! | GGTGATGGAGATGATGTTGT+AGG | + | chr4_4:82077784-82077803 | None:intergenic | 45.0% |
! | GTTGCTGTTGTTGCTGGTAA+TGG | + | chr4_4:82077835-82077854 | None:intergenic | 45.0% |
ACTGTGCTTAATCCTGGTGA+TGG | + | chr4_4:82077862-82077881 | None:intergenic | 45.0% | |
AGTGGAACTGTGCTTAATCC+TGG | + | chr4_4:82077868-82077887 | None:intergenic | 45.0% | |
!! | GTTGGTGTTGTTGGAACAAG+TGG | + | chr4_4:82077886-82077905 | None:intergenic | 45.0% |
CTTGTTCCAACAACACCAAC+TGG | - | chr4_4:82077886-82077905 | Msa0708510:intron | 45.0% | |
!!! | CCTTTTGGGACTGTTATGGT+GGG | + | chr4_4:82077922-82077941 | None:intergenic | 45.0% |
!!! | TCCTTTTGGGACTGTTATGG+TGG | + | chr4_4:82077923-82077942 | None:intergenic | 45.0% |
!!! | TGTCAATGGTGGGTCCTTTT+GGG | + | chr4_4:82077936-82077955 | None:intergenic | 45.0% |
!!! | ATGTCAATGGTGGGTCCTTT+TGG | + | chr4_4:82077937-82077956 | None:intergenic | 45.0% |
! | ATACTAGCTGCGAGTTGAGT+TGG | + | chr4_4:82078032-82078051 | None:intergenic | 45.0% |
GTATCATCGCCATCAAGTTC+AGG | - | chr4_4:82078048-82078067 | Msa0708510:intron | 45.0% | |
GTTAACCCTCCTGAACTTGA+TGG | + | chr4_4:82078060-82078079 | None:intergenic | 45.0% | |
GCATTCTCCAAACTCAAAGC+AGG | - | chr4_4:82078102-82078121 | Msa0708510:intron | 45.0% | |
AACCCTGTTCAAACACAAGC+CGG | - | chr4_4:82078222-82078241 | Msa0708510:CDS | 45.0% | |
TTGAAGCCTAGCATCATCAC+CGG | + | chr4_4:82078244-82078263 | None:intergenic | 45.0% | |
AACGGTAGCATTAACTGCTC+CGG | + | chr4_4:82078310-82078329 | None:intergenic | 45.0% | |
GCAGTTAATGCTACCGTTAC+CGG | - | chr4_4:82078312-82078331 | Msa0708510:CDS | 45.0% | |
GCCTCTTGATCTTGTTCTTC+CGG | - | chr4_4:82078389-82078408 | Msa0708510:CDS | 45.0% | |
TGATCTTGTTCTTCCGGCTA+AGG | - | chr4_4:82078395-82078414 | Msa0708510:CDS | 45.0% | |
TTAGGCAACAAACCCTTAGC+TGG | + | chr4_4:82078441-82078460 | None:intergenic | 45.0% | |
!! | AGCTAAGGGTTTGTTGCCTA+AGG | - | chr4_4:82078440-82078459 | Msa0708510:intron | 45.0% |
!! | TAGTGATGATGGTGATGGCA+AGG | - | chr4_4:82078509-82078528 | Msa0708510:CDS | 45.0% |
! | TTTGTGACTCGGAAGACAGA+GGG | + | chr4_4:82079068-82079087 | None:intergenic | 45.0% |
!! | TTTTGTGACTCGGAAGACAG+AGG | + | chr4_4:82079069-82079088 | None:intergenic | 45.0% |
GAATTAGGACATGGAAACCG+AGG | - | chr4_4:82079210-82079229 | Msa0708510:intron | 45.0% | |
AGTGGTAAACAAGCGATCCT+CGG | + | chr4_4:82079230-82079249 | None:intergenic | 45.0% | |
GGTGTGGTAATAGTGTTACC+GGG | - | chr4_4:82079295-82079314 | Msa0708510:intron | 45.0% | |
GTGTGGTAATAGTGTTACCG+GGG | - | chr4_4:82079296-82079315 | Msa0708510:intron | 45.0% | |
TTTCCACCTTTGATCCGGAA+AGG | - | chr4_4:82079335-82079354 | Msa0708510:intron | 45.0% | |
TTTCCTTTCCGGATCAAAGG+TGG | + | chr4_4:82079341-82079360 | None:intergenic | 45.0% | |
!! | GAGGTGGTTGACTCGATAAA+AGG | - | chr4_4:82079467-82079486 | Msa0708510:intron | 45.0% |
GAAGTAGGATTGAGATGTGG+AGG | - | chr4_4:82079783-82079802 | Msa0708510:intron | 45.0% | |
CTCAGGATGGAATCTGACAT+TGG | - | chr4_4:82079836-82079855 | Msa0708510:intron | 45.0% | |
AATCTGACATTGGAGCCTCA+CGG | - | chr4_4:82079846-82079865 | Msa0708510:intron | 45.0% | |
TCACGAATCTTGCAAGTCAG+AGG | + | chr4_4:82079950-82079969 | None:intergenic | 45.0% | |
ATGAGAAGGACCAAATGACG+TGG | + | chr4_4:82080063-82080082 | None:intergenic | 45.0% | |
TAACTGATAAGTGGTGAGGG+AGG | + | chr4_4:82080737-82080756 | None:intergenic | 45.0% | |
CTTTGTCTGTCATGGAAAGG+TGG | + | chr4_4:82080775-82080794 | None:intergenic | 45.0% | |
GTGATGTTGTGGATGAAGAG+GGG | + | chr4_4:82080903-82080922 | None:intergenic | 45.0% | |
GGTGATGTTGTGGATGAAGA+GGG | + | chr4_4:82080904-82080923 | None:intergenic | 45.0% | |
! | TGGTGATGTTGTGGATGAAG+AGG | + | chr4_4:82080905-82080924 | None:intergenic | 45.0% |
AGAGTTGGGCTAATGTGGTT+GGG | + | chr4_4:82081057-82081076 | None:intergenic | 45.0% | |
GGGTTTGAATTGGTGAGAGT+TGG | + | chr4_4:82081072-82081091 | None:intergenic | 45.0% | |
GGTGAGGGTGATGATATTGT+TGG | + | chr4_4:82081094-82081113 | None:intergenic | 45.0% | |
! | GTTGCTGTTGTTGCTGGTAA+TGG | + | chr4_4:82077835-82077854 | None:intergenic | 45.0% |
ACTGTGCTTAATCCTGGTGA+TGG | + | chr4_4:82077862-82077881 | None:intergenic | 45.0% | |
!! | GTTGGTGTTGTTGGAACAAG+CGG | + | chr4_4:82077886-82077905 | None:intergenic | 45.0% |
CTTGTTCCAACAACACCAAC+TGG | - | chr4_4:82077886-82077905 | Msa0708510:intron | 45.0% | |
!!! | TTTTGGGATTGCTTTGGTGG+GGG | + | chr4_4:82081230-82081249 | None:intergenic | 45.0% |
!!! | CTTTTGGGATTGCTTTGGTG+GGG | + | chr4_4:82081231-82081250 | None:intergenic | 45.0% |
!!! | CCTTTTGGGATTGCTTTGGT+GGG | + | chr4_4:82081232-82081251 | None:intergenic | 45.0% |
!!! | TCCTTTTGGGATTGCTTTGG+TGG | + | chr4_4:82081233-82081252 | None:intergenic | 45.0% |
!!! | TGTCAATGGTGGGTCCTTTT+GGG | + | chr4_4:82077936-82077955 | None:intergenic | 45.0% |
!!! | ATGTCAATGGTGGGTCCTTT+TGG | + | chr4_4:82077937-82077956 | None:intergenic | 45.0% |
! | ATACTAGCTGCGAGTTGAGT+TGG | + | chr4_4:82078032-82078051 | None:intergenic | 45.0% |
CAGCTAGTATCATCACCATC+AGG | - | chr4_4:82081352-82081371 | Msa0708510:CDS | 45.0% | |
GTATCATCACCATCAGGTTC+AGG | - | chr4_4:82081358-82081377 | Msa0708510:CDS | 45.0% | |
GCATTCTCCAAACTCAAAGC+AGG | - | chr4_4:82078102-82078121 | Msa0708510:intron | 45.0% | |
AACCCTGTTCAAACACAAGC+CGG | - | chr4_4:82078222-82078241 | Msa0708510:CDS | 45.0% | |
TTGAAGCCTAGCATCATCAC+CGG | + | chr4_4:82078244-82078263 | None:intergenic | 45.0% | |
CTGAACGTCACTACTTACAG+TGG | - | chr4_4:82081574-82081593 | Msa0708510:CDS | 45.0% | |
AACGGTAGCATTAACTGCTC+CGG | + | chr4_4:82078310-82078329 | None:intergenic | 45.0% | |
GCAGTTAATGCTACCGTTAC+TGG | - | chr4_4:82078312-82078331 | Msa0708510:CDS | 45.0% | |
GCCTCTTGATCTTGTTCTTC+CGG | - | chr4_4:82078389-82078408 | Msa0708510:CDS | 45.0% | |
TGATCTTGTTCTTCCGGCTA+AGG | - | chr4_4:82078395-82078414 | Msa0708510:CDS | 45.0% | |
TTAGGCAACAAACCCTTAGC+CGG | + | chr4_4:82078441-82078460 | None:intergenic | 45.0% | |
! | TCGGTTGTAGATGATGGTAG+CGG | - | chr4_4:82081790-82081809 | Msa0708510:CDS | 45.0% |
!! | CAGTGATGATGGTGATGGAA+AGG | - | chr4_4:82081819-82081838 | Msa0708510:CDS | 45.0% |
! | TTTGGAATGGGTTTGGTTGG+TGG | - | chr4_4:82081898-82081917 | Msa0708510:CDS | 45.0% |
!!! | ATTTTAATGATAATATAATA+TGG | + | chr4_4:82077302-82077321 | None:intergenic | 5.0% |
!! | GCTGGGACTAATGGTTTTGC+TGG | + | chr4_4:82075057-82075076 | None:intergenic | 50.0% |
CTAGCTAGTGATAGCCCACA+AGG | - | chr4_4:82075402-82075421 | Msa0708510:CDS | 50.0% | |
!! | GGTGCTGGAGCTTTAGCTTT+AGG | + | chr4_4:82075576-82075595 | None:intergenic | 50.0% |
TTAGGTGCCTTAGCAAGAGC+TGG | + | chr4_4:82075597-82075616 | None:intergenic | 50.0% | |
TGATCAGACTCAGGCACACA+AGG | - | chr4_4:82075650-82075669 | Msa0708510:CDS | 50.0% | |
ACTACCATTGCACCCTGTGT+TGG | - | chr4_4:82076144-82076163 | Msa0708510:intron | 50.0% | |
CTTACCAACACAGGGTGCAA+TGG | + | chr4_4:82076151-82076170 | None:intergenic | 50.0% | |
TGTACTCTACATAGCACGCG+AGG | - | chr4_4:82076255-82076274 | Msa0708510:intron | 50.0% | |
ACTCCCTCCTCCCACAATAA+CGG | + | chr4_4:82076403-82076422 | None:intergenic | 50.0% | |
TGTGGAGGAAGAGGGAGAAA+GGG | + | chr4_4:82077587-82077606 | None:intergenic | 50.0% | |
TTGTGGAGGAAGAGGGAGAA+AGG | + | chr4_4:82077588-82077607 | None:intergenic | 50.0% | |
GGTAGTGTTGTGGAGGAAGA+GGG | + | chr4_4:82077595-82077614 | None:intergenic | 50.0% | |
! | TGGTAGTGTTGTGGAGGAAG+AGG | + | chr4_4:82077596-82077615 | None:intergenic | 50.0% |
!! | GTTGCTTGGTAGTGTTGTGG+AGG | + | chr4_4:82077602-82077621 | None:intergenic | 50.0% |
TGAGAGTTGGGCTAAAGTGG+TGG | + | chr4_4:82077749-82077768 | None:intergenic | 50.0% | |
TGGTGAGAGTTGGGCTAAAG+TGG | + | chr4_4:82077752-82077771 | None:intergenic | 50.0% | |
GGGTGGAATTGGTGAGAGTT+GGG | + | chr4_4:82077761-82077780 | None:intergenic | 50.0% | |
GATGTTGTAGGGGGTGGAAT+TGG | + | chr4_4:82077772-82077791 | None:intergenic | 50.0% | |
!! | GTTGATGGTAAGGGTGGTGA+TGG | + | chr4_4:82077799-82077818 | None:intergenic | 50.0% |
!! | GCTGTTGTTGATGGTAAGGG+TGG | + | chr4_4:82077805-82077824 | None:intergenic | 50.0% |
! | GGTGGTGATGCTGTTGTTGA+TGG | + | chr4_4:82077814-82077833 | None:intergenic | 50.0% |
!! | GCTGTTGTTGCTGGTAATGG+TGG | + | chr4_4:82077832-82077851 | None:intergenic | 50.0% |
CCCACCATAACAGTCCCAAA+AGG | - | chr4_4:82077919-82077938 | Msa0708510:intron | 50.0% | |
!!! | GGGTCCTTTTGGGACTGTTA+TGG | + | chr4_4:82077926-82077945 | None:intergenic | 50.0% |
TCATCGCCATCAAGTTCAGG+AGG | - | chr4_4:82078051-82078070 | Msa0708510:intron | 50.0% | |
CATCGCCATCAAGTTCAGGA+GGG | - | chr4_4:82078052-82078071 | Msa0708510:intron | 50.0% | |
! | GAGGAACCCTGCTTTGAGTT+TGG | + | chr4_4:82078112-82078131 | None:intergenic | 50.0% |
GTCTATCAGTGAGGGAGTTG+AGG | + | chr4_4:82078131-82078150 | None:intergenic | 50.0% | |
GGCTTGTGTTTGAACAGGGT+TGG | + | chr4_4:82078223-82078242 | None:intergenic | 50.0% | |
!! | CACCGGCTTGTGTTTGAACA+GGG | + | chr4_4:82078227-82078246 | None:intergenic | 50.0% |
!! | TCACCGGCTTGTGTTTGAAC+AGG | + | chr4_4:82078228-82078247 | None:intergenic | 50.0% |
CTGAACGTCACTACTTACGG+TGG | - | chr4_4:82078264-82078283 | Msa0708510:CDS | 50.0% | |
CGGTGGCAGTCAAGTTAGTA+TGG | - | chr4_4:82078281-82078300 | Msa0708510:CDS | 50.0% | |
GCCGGAAGAACAAGATCAAG+AGG | + | chr4_4:82078393-82078412 | None:intergenic | 50.0% | |
!! | AAGGGTTTGTTGCCTAAGGC+TGG | - | chr4_4:82078444-82078463 | Msa0708510:intron | 50.0% |
!! | AGTGGTGCTGGTAGTGATGA+TGG | - | chr4_4:82078498-82078517 | Msa0708510:CDS | 50.0% |
!! | GCTGGTAGTGATGATGGTGA+TGG | - | chr4_4:82078504-82078523 | Msa0708510:CDS | 50.0% |
! | CTGCTGATGTTTCTGCTGCA+GGG | - | chr4_4:82078538-82078557 | Msa0708510:CDS | 50.0% |
!! | ATCTACAAAGATGGCGGAGG+TGG | - | chr4_4:82079451-82079470 | Msa0708510:intron | 50.0% |
GGATTGAGATGTGGAGGGAA+CGG | - | chr4_4:82079789-82079808 | Msa0708510:intron | 50.0% | |
TGGAGGGAACGGAACTGTAA+CGG | - | chr4_4:82079800-82079819 | Msa0708510:intron | 50.0% | |
GGAACGGAACTGTAACGGTT+TGG | - | chr4_4:82079805-82079824 | Msa0708510:intron | 50.0% | |
ATTGGAGCCTCACGGAAATG+TGG | - | chr4_4:82079854-82079873 | Msa0708510:intron | 50.0% | |
GTCTTGTCCACATTTCCGTG+AGG | + | chr4_4:82079864-82079883 | None:intergenic | 50.0% | |
TCGTGAGCACTACCATGTGA+AGG | - | chr4_4:82079964-82079983 | Msa0708510:intron | 50.0% | |
GGTCCATGTACCACGTCATT+TGG | - | chr4_4:82080050-82080069 | Msa0708510:intron | 50.0% | |
GGACCAAATGACGTGGTACA+TGG | + | chr4_4:82080056-82080075 | None:intergenic | 50.0% | |
TGTGGATGAAGAGGGGAGAA+GGG | + | chr4_4:82080896-82080915 | None:intergenic | 50.0% | |
TTGTGGATGAAGAGGGGAGA+AGG | + | chr4_4:82080897-82080916 | None:intergenic | 50.0% | |
GAGTTGGGCTAATGTGGTTG+GGG | + | chr4_4:82081056-82081075 | None:intergenic | 50.0% | |
GAGAGTTGGGCTAATGTGGT+TGG | + | chr4_4:82081058-82081077 | None:intergenic | 50.0% | |
TGGTGAGAGTTGGGCTAATG+TGG | + | chr4_4:82081062-82081081 | None:intergenic | 50.0% | |
!! | GTTGATGGTAAGGGTGGTGA+GGG | + | chr4_4:82077799-82077818 | None:intergenic | 50.0% |
!! | TGTTGATGGTAAGGGTGGTG+AGG | + | chr4_4:82077800-82077819 | None:intergenic | 50.0% |
!! | GCTGTTGTTGATGGTAAGGG+TGG | + | chr4_4:82077805-82077824 | None:intergenic | 50.0% |
! | GGTGGTGATGCTGTTGTTGA+TGG | + | chr4_4:82077814-82077833 | None:intergenic | 50.0% |
!! | GCTGTTGTTGCTGGTAATGG+TGG | + | chr4_4:82077832-82077851 | None:intergenic | 50.0% |
AGCGGAACTGTGCTTAATCC+TGG | + | chr4_4:82081178-82081197 | None:intergenic | 50.0% | |
CCCACCAAAGCAATCCCAAA+AGG | - | chr4_4:82081229-82081248 | Msa0708510:CDS | 50.0% | |
!!! | GGGTCCTTTTGGGATTGCTT+TGG | + | chr4_4:82081236-82081255 | None:intergenic | 50.0% |
TCATCACCATCAGGTTCAGG+AGG | - | chr4_4:82081361-82081380 | Msa0708510:CDS | 50.0% | |
CATCACCATCAGGTTCAGGA+GGG | - | chr4_4:82081362-82081381 | Msa0708510:CDS | 50.0% | |
GTTAACCCTCCTGAACCTGA+TGG | + | chr4_4:82081370-82081389 | None:intergenic | 50.0% | |
! | GAGGAACCCTGCTTTGAGTT+TGG | + | chr4_4:82078112-82078131 | None:intergenic | 50.0% |
GTCTATCAGTGAGGGAGTTG+AGG | + | chr4_4:82078131-82078150 | None:intergenic | 50.0% | |
GGCTTGTGTTTGAACAGGGT+TGG | + | chr4_4:82078223-82078242 | None:intergenic | 50.0% | |
!! | CACCGGCTTGTGTTTGAACA+GGG | + | chr4_4:82078227-82078246 | None:intergenic | 50.0% |
!! | TCACCGGCTTGTGTTTGAAC+AGG | + | chr4_4:82078228-82078247 | None:intergenic | 50.0% |
GCCGGAAGAACAAGATCAAG+AGG | + | chr4_4:82078393-82078412 | None:intergenic | 50.0% | |
!! | GGCTAAGGGTTTGTTGCCTA+AGG | - | chr4_4:82081750-82081769 | Msa0708510:CDS | 50.0% |
!! | AAGGGTTTGTTGCCTAAGGC+TGG | - | chr4_4:82078444-82078463 | Msa0708510:intron | 50.0% |
!! | TGCTGGAGCAGGTGTTGAAG+GGG | + | chr4_4:82075034-82075053 | None:intergenic | 55.0% |
!! | GTGCTGGAGCAGGTGTTGAA+GGG | + | chr4_4:82075035-82075054 | None:intergenic | 55.0% |
TCCAGCACCAGCTCTTGCTA+AGG | - | chr4_4:82075587-82075606 | Msa0708510:CDS | 55.0% | |
! | TGTGAGCACCGCCGTTATTG+TGG | - | chr4_4:82076389-82076408 | Msa0708510:intron | 55.0% |
! | GTGAGCACCGCCGTTATTGT+GGG | - | chr4_4:82076390-82076409 | Msa0708510:intron | 55.0% |
GAGGAAGAGGGAGAAAGGGT+TGG | + | chr4_4:82077583-82077602 | None:intergenic | 55.0% | |
GAGTTGGGCTAAAGTGGTGG+AGG | + | chr4_4:82077746-82077765 | None:intergenic | 55.0% | |
GGGGTGGAATTGGTGAGAGT+TGG | + | chr4_4:82077762-82077781 | None:intergenic | 55.0% | |
GGAGATGATGTTGTAGGGGG+TGG | + | chr4_4:82077778-82077797 | None:intergenic | 55.0% | |
!! | GGTGCTGTTGCTGTTGTTGC+TGG | + | chr4_4:82077841-82077860 | None:intergenic | 55.0% |
ACAGCAACAGCACCATCACC+AGG | - | chr4_4:82077847-82077866 | Msa0708510:intron | 55.0% | |
!! | GGTGCACCAGTTGGTGTTGT+TGG | + | chr4_4:82077895-82077914 | None:intergenic | 55.0% |
!! | GGGACTGTTATGGTGGGTGA+TGG | + | chr4_4:82077916-82077935 | None:intergenic | 55.0% |
! | CACAAGCCGGTGATGATGCT+AGG | - | chr4_4:82078235-82078254 | Msa0708510:CDS | 55.0% |
! | TAAGGCTCCATCTCTGGCTC+CGG | - | chr4_4:82078413-82078432 | Msa0708510:CDS | 55.0% |
AACAAACCCTTAGCTGGCGC+CGG | + | chr4_4:82078435-82078454 | None:intergenic | 55.0% | |
TCGGTTGTAGACGATGGCAG+TGG | - | chr4_4:82078480-82078499 | Msa0708510:CDS | 55.0% | |
CCTGCAGCAGAAACATCAGC+AGG | + | chr4_4:82078540-82078559 | None:intergenic | 55.0% | |
! | CCTGCTGATGTTTCTGCTGC+AGG | - | chr4_4:82078537-82078556 | Msa0708510:CDS | 55.0% |
TGCTGCAGGGTCTGTGATGT+GGG | - | chr4_4:82078551-82078570 | Msa0708510:CDS | 55.0% | |
GTGGATGAAGAGGGGAGAAG+GGG | + | chr4_4:82080895-82080914 | None:intergenic | 55.0% | |
!! | GGTGCTGTTGCTGTTGTTGC+TGG | + | chr4_4:82077841-82077860 | None:intergenic | 55.0% |
ACAGCAACAGCACCATCACC+AGG | - | chr4_4:82077847-82077866 | Msa0708510:intron | 55.0% | |
!! | GGTGCACCAGTTGGTGTTGT+TGG | + | chr4_4:82077895-82077914 | None:intergenic | 55.0% |
! | CACAAGCCGGTGATGATGCT+AGG | - | chr4_4:82078235-82078254 | Msa0708510:CDS | 55.0% |
AACAAACCCTTAGCCGGTGC+AGG | + | chr4_4:82081745-82081764 | None:intergenic | 55.0% | |
!! | GTAGATGATGGTAGCGGTGC+TGG | - | chr4_4:82081796-82081815 | Msa0708510:CDS | 55.0% |
!! | GCTGGCAGTGATGATGGTGA+TGG | - | chr4_4:82081814-82081833 | Msa0708510:CDS | 55.0% |
CCTGCAGCAGAAACATCAGC+AGG | + | chr4_4:82078540-82078559 | None:intergenic | 55.0% | |
! | CCTGCTGATGTTTCTGCTGC+AGG | - | chr4_4:82078537-82078556 | Msa0708510:CDS | 55.0% |
CTGCTGCAGGATCTGTGCAT+TGG | - | chr4_4:82081860-82081879 | Msa0708510:CDS | 55.0% | |
!!! | GGTGCTTTTGGTGCTGCAGC+TGG | + | chr4_4:82074970-82074989 | None:intergenic | 60.0% |
!!! | GGGGCTGGTTTTGTAGGTGC+TGG | + | chr4_4:82075000-82075019 | None:intergenic | 60.0% |
!!! | GGGGTTGGTTTTGTAGGGGC+TGG | + | chr4_4:82075015-82075034 | None:intergenic | 60.0% |
!! | GGAGCAGGTGTTGAAGGGGT+TGG | + | chr4_4:82075030-82075049 | None:intergenic | 60.0% |
!! | GGTGCTGGAGCAGGTGTTGA+AGG | + | chr4_4:82075036-82075055 | None:intergenic | 60.0% |
!! | GGTTTTGCTGGTGCTGGAGC+AGG | + | chr4_4:82075045-82075064 | None:intergenic | 60.0% |
GCCTTAGCAAGAGCTGGTGC+TGG | + | chr4_4:82075591-82075610 | None:intergenic | 60.0% | |
AGCACCGCCGTTATTGTGGG+AGG | - | chr4_4:82076393-82076412 | Msa0708510:intron | 60.0% | |
ACCGCCGTTATTGTGGGAGG+AGG | - | chr4_4:82076396-82076415 | Msa0708510:intron | 60.0% | |
CCCTCCTCCCACAATAACGG+CGG | + | chr4_4:82076400-82076419 | None:intergenic | 60.0% | |
CCGCCGTTATTGTGGGAGGA+GGG | - | chr4_4:82076397-82076416 | Msa0708510:intron | 60.0% | |
! | GTGGGTGATGGTGCACCAGT+TGG | + | chr4_4:82077904-82077923 | None:intergenic | 60.0% |
TCCGGCTAAGGCTCCATCTC+TGG | - | chr4_4:82078407-82078426 | Msa0708510:CDS | 60.0% | |
GCCAGAGATGGAGCCTTAGC+CGG | + | chr4_4:82078411-82078430 | None:intergenic | 60.0% | |
GTAGACGATGGCAGTGGTGC+TGG | - | chr4_4:82078486-82078505 | Msa0708510:CDS | 60.0% | |
CTGCTGCAGGGTCTGTGATG+TGG | - | chr4_4:82078550-82078569 | Msa0708510:CDS | 60.0% | |
GGGATTGCTTTGGTGGGGGA+TGG | + | chr4_4:82081226-82081245 | None:intergenic | 60.0% | |
TCCGGCTAAGGCTCCAGCTT+TGG | - | chr4_4:82081717-82081736 | Msa0708510:intron | 60.0% | |
GCCAAAGCTGGAGCCTTAGC+CGG | + | chr4_4:82081721-82081740 | None:intergenic | 60.0% | |
! | TCCAGCTTTGGCTCCTGCAC+CGG | - | chr4_4:82081729-82081748 | Msa0708510:CDS | 60.0% |
!! | TTTGGCTCCTGCACCGGCTA+AGG | - | chr4_4:82081735-82081754 | Msa0708510:CDS | 60.0% |
!! | TTGGCTCCTGCACCGGCTAA+GGG | - | chr4_4:82081736-82081755 | Msa0708510:CDS | 60.0% |
!! | AGCGGTGCTGGCAGTGATGA+TGG | - | chr4_4:82081808-82081827 | Msa0708510:CDS | 60.0% |
GTGGGGGATGGTGCACCAGT+TGG | + | chr4_4:82081214-82081233 | None:intergenic | 65.0% | |
! | TCTGGCTCCGGCGCCAGCTA+AGG | - | chr4_4:82078425-82078444 | Msa0708510:CDS | 70.0% |
CTGGCTCCGGCGCCAGCTAA+GGG | - | chr4_4:82078426-82078445 | Msa0708510:CDS | 70.0% | |
GCCGGTGCAGGAGCCAAAGC+TGG | + | chr4_4:82081733-82081752 | None:intergenic | 70.0% | |
! | GCTGGCGCCGGAGCCAGAGA+TGG | + | chr4_4:82078423-82078442 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_4 | gene | 82074895 | 82081933 | 82074895 | ID=Msa0708510;Name=Msa0708510 |
chr4_4 | mRNA | 82074895 | 82081933 | 82074895 | ID=Msa0708510-mRNA-1;Parent=Msa0708510;Name=Msa0708510-mRNA-1;_AED=0.10;_eAED=0.15;_QI=0|0|0|1|0|0.22|9|0|740 |
chr4_4 | exon | 82081719 | 82081933 | 82081719 | ID=Msa0708510-mRNA-1:exon:27021;Parent=Msa0708510-mRNA-1 |
chr4_4 | exon | 82081564 | 82081685 | 82081564 | ID=Msa0708510-mRNA-1:exon:27020;Parent=Msa0708510-mRNA-1 |
chr4_4 | exon | 82081292 | 82081539 | 82081292 | ID=Msa0708510-mRNA-1:exon:27019;Parent=Msa0708510-mRNA-1 |
chr4_4 | exon | 82081153 | 82081248 | 82081153 | ID=Msa0708510-mRNA-1:exon:27018;Parent=Msa0708510-mRNA-1 |
chr4_4 | exon | 82078940 | 82078947 | 82078940 | ID=Msa0708510-mRNA-1:exon:27017;Parent=Msa0708510-mRNA-1 |
chr4_4 | exon | 82078673 | 82078844 | 82078673 | ID=Msa0708510-mRNA-1:exon:27016;Parent=Msa0708510-mRNA-1 |
chr4_4 | exon | 82078457 | 82078657 | 82078457 | ID=Msa0708510-mRNA-1:exon:27015;Parent=Msa0708510-mRNA-1 |
chr4_4 | exon | 82078214 | 82078447 | 82078214 | ID=Msa0708510-mRNA-1:exon:27014;Parent=Msa0708510-mRNA-1 |
chr4_4 | exon | 82074895 | 82075821 | 82074895 | ID=Msa0708510-mRNA-1:exon:27013;Parent=Msa0708510-mRNA-1 |
chr4_4 | CDS | 82081719 | 82081933 | 82081719 | ID=Msa0708510-mRNA-1:cds;Parent=Msa0708510-mRNA-1 |
chr4_4 | CDS | 82081564 | 82081685 | 82081564 | ID=Msa0708510-mRNA-1:cds;Parent=Msa0708510-mRNA-1 |
chr4_4 | CDS | 82081292 | 82081539 | 82081292 | ID=Msa0708510-mRNA-1:cds;Parent=Msa0708510-mRNA-1 |
chr4_4 | CDS | 82081153 | 82081248 | 82081153 | ID=Msa0708510-mRNA-1:cds;Parent=Msa0708510-mRNA-1 |
chr4_4 | CDS | 82078940 | 82078947 | 82078940 | ID=Msa0708510-mRNA-1:cds;Parent=Msa0708510-mRNA-1 |
chr4_4 | CDS | 82078673 | 82078844 | 82078673 | ID=Msa0708510-mRNA-1:cds;Parent=Msa0708510-mRNA-1 |
chr4_4 | CDS | 82078457 | 82078657 | 82078457 | ID=Msa0708510-mRNA-1:cds;Parent=Msa0708510-mRNA-1 |
chr4_4 | CDS | 82078214 | 82078447 | 82078214 | ID=Msa0708510-mRNA-1:cds;Parent=Msa0708510-mRNA-1 |
chr4_4 | CDS | 82074895 | 82075821 | 82074895 | ID=Msa0708510-mRNA-1:cds;Parent=Msa0708510-mRNA-1 |
Gene Sequence |
Protein sequence |