AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1199250

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1199250 MtrunA17_Chr8g0368701 82.901 655 38 7 1 635 1 601 0.0 644
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 194 sgRNAs with CRISPR-Local

Find 496 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTTGTGGGGTGGTGGTTC+TGG 0.203685 8_1:-51181703 None:intergenic
CTGTTGTTTGTTTGTATTAC+TGG 0.204393 8_1:-51180411 None:intergenic
GAAGGAACTGGTGATGATTT+TGG 0.235505 8_1:-51181604 None:intergenic
AGGGATTATAGTTGGTAATT+TGG 0.235922 8_1:-51180744 None:intergenic
TGCTGGTGCTGGTGCTTCTT+TGG 0.270949 8_1:-51181500 None:intergenic
TTACAATGGCTGCAGTGTTT+TGG 0.286689 8_1:+51180081 None:intergenic
TGAAGTTGTACTTGGCAAAT+TGG 0.303149 8_1:-51180174 None:intergenic
TTGGCCGGTGCTGGTGCTTT+TGG 0.306406 8_1:-51181481 None:intergenic
CTTAATGCTGGTGTAACCTT+TGG 0.322879 8_1:-51181298 None:intergenic
AGCTGCCGTAACTGTGGTTA+TGG 0.323092 8_1:-51180552 None:intergenic
GGTTTCACAGGAGAAGGTTT+TGG 0.326918 8_1:-51181223 None:intergenic
GGTGATGGTGGGAGAATTGC+TGG 0.332216 8_1:-51181628 None:intergenic
ACCGTTGGAGTTGCAACTTT+TGG 0.332924 8_1:-51181073 None:intergenic
ATAAAATTATTTCATATGTA+TGG 0.335009 8_1:+51182287 Msa1199250:three_prime_UTR
GATGTTGGAGTTGTAGCTTT+TGG 0.341303 8_1:-51181163 None:intergenic
GGTGCTTCTTTGGCCGGTGC+TGG 0.344916 8_1:-51181490 None:intergenic
TCAAGTTACACATAACAAAA+TGG 0.346881 8_1:-51182181 None:intergenic
ATAGGCTGTTGTTTGTATAA+TGG 0.354379 8_1:-51180326 None:intergenic
GGTGCGGGAGCTTTCGGAAC+TGG 0.359424 8_1:-51181202 None:intergenic
GCAGGTGCTGGTGATACCTT+TGG 0.361778 8_1:-51181451 None:intergenic
GCTGTTGGAGTTGTAACTTT+AGG 0.364940 8_1:-51181118 None:intergenic
TTTGGTACCTTTGCAGGTGC+TGG 0.365683 8_1:-51181463 None:intergenic
GGTGCTGGTGTGTCTATTGT+AGG 0.366893 8_1:-51181661 None:intergenic
ATTGTTGAACTTGAACTTGT+AGG 0.370326 8_1:-51181790 None:intergenic
TTAATGCTGGTGTAACCTTT+GGG 0.371919 8_1:-51181297 None:intergenic
CAGAAGATGCTATATATATC+AGG 0.376730 8_1:+51182211 Msa1199250:three_prime_UTR
GGTTCTGGTGCATCATCTTC+AGG 0.377101 8_1:-51181688 None:intergenic
CGAAGCTGCTGTTGGCAACT+TGG 0.377529 8_1:-51180777 None:intergenic
GCAGGAGTTGCCGCCACAAT+AGG 0.378335 8_1:-51180389 None:intergenic
GCTGTTGGAGTCGTAGCTTT+TGG 0.378998 8_1:-51181028 None:intergenic
TCTTTGTCTGGTGCGGGTGC+TGG 0.381750 8_1:-51181544 None:intergenic
GATGTTGGAGTCGCGACTTT+GGG 0.385779 8_1:-51180983 None:intergenic
TCATCAGCTAGTGGTGGTGC+TGG 0.387208 8_1:-51181829 None:intergenic
CTCTTGTGCTTGTGGGGTGG+TGG 0.387724 8_1:-51181709 None:intergenic
GGTGCCGGTGTTTCTTTGTC+TGG 0.389256 8_1:-51181556 None:intergenic
ACAGGAGTTGCTGCCACAAT+AGG 0.390855 8_1:-51180641 None:intergenic
GAACTTGAACTTGTAGGTTC+TGG 0.392200 8_1:-51181784 None:intergenic
CAAGTTCAACAATCATTAGA+AGG 0.392890 8_1:+51181800 Msa1199250:CDS
GCAGGAGTTGCCGCCACAAT+AGG 0.398464 8_1:-51180434 None:intergenic
GCAGGAGTTGCTGCCACAAT+AGG 0.401887 8_1:-51180344 None:intergenic
GGTAATGGTGGAAGTGAAAC+AGG 0.402661 8_1:-51181406 None:intergenic
GGTGCTGGTGCTTCTTTGGC+CGG 0.404875 8_1:-51181496 None:intergenic
GCAGGAGTTGCCGCCACAAT+AGG 0.406498 8_1:-51180479 None:intergenic
GATAATGGTGGTAAAGAAAC+AGG 0.407824 8_1:-51181376 None:intergenic
GGCAACTTGGAAGGTGCGGC+AGG 0.411164 8_1:-51180764 None:intergenic
AGATATTACCGCACTAGGAC+TGG 0.411786 8_1:-51181893 None:intergenic
GGTGTTGGTGCAGGTGATGG+TGG 0.414784 8_1:-51181640 None:intergenic
CATCAGCTAGTGGTGGTGCT+GGG 0.417438 8_1:-51181828 None:intergenic
AGCTGCCGTGACCGTGGCTG+TGG 0.419087 8_1:-51180255 None:intergenic
GCTGCCGTAACTGTGGTTAT+GGG 0.424442 8_1:-51180551 None:intergenic
TCATCTTCAGGTGCTGGTGC+TGG 0.431144 8_1:-51181676 None:intergenic
GATGCTGGAGACGTAACTTT+AGG 0.431586 8_1:-51180938 None:intergenic
TGCTGCTGAGATCGTGGTCG+AGG 0.438663 8_1:-51180714 None:intergenic
GGTTGGTTGTTTGCTAGACA+AGG 0.438663 8_1:-51180858 None:intergenic
GTTATGGGTTTGTTAGAAGT+AGG 0.442540 8_1:-51180536 None:intergenic
GAAACAGGCGGTATAGATAA+TGG 0.444645 8_1:-51181391 None:intergenic
TTTGGAACTGGTGGTTTCAC+AGG 0.447447 8_1:-51181235 None:intergenic
TTGGGGACAGGTGACTTCAC+AGG 0.448425 8_1:-51180965 None:intergenic
GGAGAAGTTGCTGCTACAAC+AGG 0.450503 8_1:-51180218 None:intergenic
GGTGCATCATCTTCAGGTGC+TGG 0.451679 8_1:-51181682 None:intergenic
AGAATTGCTGGGGAAGGAAC+TGG 0.457371 8_1:-51181616 None:intergenic
GGTTTCACAGGTGCAGCTGT+TGG 0.463863 8_1:-51181133 None:intergenic
TTGTGTGTAGGTGCTGGTGC+TGG 0.464570 8_1:-51181511 None:intergenic
AGATGTTGGAGTCGCGACTT+TGG 0.466079 8_1:-51180984 None:intergenic
TGCAAACCAAGTAACATCTT+CGG 0.467941 8_1:-51182259 None:intergenic
TTGTGTGTTGGTGCTGGTGC+CGG 0.470899 8_1:-51181571 None:intergenic
ATTCATCCGAAGATGTTACT+TGG 0.473079 8_1:+51182253 Msa1199250:three_prime_UTR
TGTTTATTTGTACTACTAGC+AGG 0.474859 8_1:-51180362 None:intergenic
TTGTATAATGGCAGTGTTGA+AGG 0.479559 8_1:-51180314 None:intergenic
ACCTTTGGTGGTTTAGAAGC+TGG 0.479939 8_1:-51181436 None:intergenic
TTTGGAACTGGTGGTTTCAC+AGG 0.480404 8_1:-51181055 None:intergenic
GTAGGTGTTGGTGCAGGTGA+TGG 0.481502 8_1:-51181643 None:intergenic
TGTTTGTTTGTATTACTAGC+AGG 0.482983 8_1:-51180497 None:intergenic
GGTGTTTCTTTGTCTGGTGC+GGG 0.485076 8_1:-51181550 None:intergenic
TGTTTGTTTGTATTGCTAGC+AGG 0.486872 8_1:-51180452 None:intergenic
CAATACAATGAAAGAACAAA+AGG 0.489477 8_1:-51182351 None:intergenic
GGTTTCACAGGAGAGGCTGT+TGG 0.490275 8_1:-51181043 None:intergenic
GACTTCACAGGGGAAGATGC+TGG 0.490421 8_1:-51180953 None:intergenic
TGAAGGGTCCGATGGATTTG+TGG 0.492048 8_1:-51180297 None:intergenic
GGAGACGTAACTTTAGGAAC+TGG 0.493413 8_1:-51180932 None:intergenic
TTCGGAACTGGTGGTTTCAA+AGG 0.494847 8_1:-51181190 None:intergenic
ATCAGCTAGTGGTGGTGCTG+GGG 0.494871 8_1:-51181827 None:intergenic
GGTTGTTGTTTCGCTACAAA+CGG 0.496927 8_1:-51180197 None:intergenic
TTTGGAACCAGTGGTTTCAC+AGG 0.497212 8_1:-51181145 None:intergenic
TTTGGAACTGGTGACTTCAC+GGG 0.497698 8_1:-51181010 None:intergenic
ATTATAGTTGGTAATTTGGA+TGG 0.497793 8_1:-51180740 None:intergenic
TTTGGGACTGGTGATTTGAC+AGG 0.503667 8_1:-51181280 None:intergenic
TGGGGACAGGTGACTTCACA+GGG 0.509083 8_1:-51180964 None:intergenic
CGGTGTTTCTTTGTCTGGTG+CGG 0.510168 8_1:-51181551 None:intergenic
GTGTTGGTGCAGGTGATGGT+GGG 0.510337 8_1:-51181639 None:intergenic
TGTTTGTTTGTATTACTGGC+AGG 0.510981 8_1:-51180407 None:intergenic
CTCAATCAATGCTCAATCAC+AGG 0.513096 8_1:+51180139 Msa1199250:CDS
ACTGGTGGTTTCACAGGAGA+AGG 0.515088 8_1:-51181229 None:intergenic
TGGAGAAAGATGTTGTCAAC+CGG 0.516475 8_1:+51182144 Msa1199250:CDS
TTTGTTCTTTCATTGTATTG+TGG 0.517068 8_1:+51182354 Msa1199250:three_prime_UTR
CTAGGACTGGGTGCTGGTGA+TGG 0.517224 8_1:-51181880 None:intergenic
GGTTTCAAAGGCGCAGATGT+TGG 0.519485 8_1:-51181178 None:intergenic
CAGGCTCATATGACAAAACA+TGG 0.521551 8_1:+51182230 Msa1199250:three_prime_UTR
GGAGTCGCGACTTTGGGGAC+AGG 0.526763 8_1:-51180977 None:intergenic
GGTGCTGGTGATACCTTTGG+TGG 0.527139 8_1:-51181448 None:intergenic
GCAGATGGTGTACTAGAAGT+TGG 0.527732 8_1:-51180800 None:intergenic
GAAGTAGGAGAAGTTGCTGC+AGG 0.532877 8_1:-51180521 None:intergenic
GACTTCACGGGAGCAGATGT+TGG 0.535590 8_1:-51180998 None:intergenic
TCAGCTAGTGGTGGTGCTGG+GGG 0.540058 8_1:-51181826 None:intergenic
TTGACAGGAGCAGCTGTTGG+AGG 0.540364 8_1:-51181265 None:intergenic
TTTCTCTTGTGCTTGTGGGG+TGG 0.542270 8_1:-51181712 None:intergenic
GGGTTTGTTAGAAGTAGGAG+AGG 0.542804 8_1:-51180693 None:intergenic
GGTGTGTCTATTGTAGGTGT+TGG 0.547086 8_1:-51181655 None:intergenic
GGCAGTGTTGAAGGGTCCGA+TGG 0.550562 8_1:-51180305 None:intergenic
GGTGCGGCAGGGATTATAGT+TGG 0.553825 8_1:-51180752 None:intergenic
GTTGGTTGTTTGCTAGACAA+GGG 0.553964 8_1:-51180857 None:intergenic
CACAATCTTACCATGTGCAA+TGG 0.554836 8_1:+51182124 Msa1199250:CDS
GGTACCAAAAGCACCAGCAC+CGG 0.557719 8_1:+51181477 Msa1199250:CDS
CAAACCCATAACCACAGTTA+CGG 0.558224 8_1:+51180547 Msa1199250:CDS
TATATATAGCATCTTCTGCA+TGG 0.560144 8_1:-51182206 None:intergenic
GCTGTGGGTTTGTTAGAAGT+AGG 0.560234 8_1:-51180239 None:intergenic
GCGGGAGCTTTCGGAACTGG+TGG 0.563819 8_1:-51181199 None:intergenic
TTTGTGGTTGGCAACTTCGA+TGG 0.564553 8_1:-51180281 None:intergenic
CTGTGATTGAGCATTGATTG+AGG 0.564994 8_1:-51180138 None:intergenic
GAAGCTGGTGGCAATGGTAA+TGG 0.565289 8_1:-51181421 None:intergenic
GAAGTAGGAGAGGTTGCTGC+TGG 0.566340 8_1:-51180683 None:intergenic
TTCGTGGTTGGCAACTTCGA+TGG 0.567282 8_1:-51180578 None:intergenic
TCTATTGTAGGTGTTGGTGC+AGG 0.569333 8_1:-51181649 None:intergenic
AGCTGCACCTGTGAAACCAC+TGG 0.570651 8_1:+51181138 Msa1199250:CDS
TTGTCTAGTGGCAATGTGGA+AGG 0.571611 8_1:-51180611 None:intergenic
GTCGAGGGTTTGTTAGAAGT+AGG 0.572486 8_1:-51180698 None:intergenic
GCAGGCGGTTGAGTGGTGGT+TGG 0.573828 8_1:-51180875 None:intergenic
GCTGCCGTGACCGTGGCTGT+GGG 0.573904 8_1:-51180254 None:intergenic
CGCACCAGACAAAGAAACAC+CGG 0.574209 8_1:+51181552 Msa1199250:CDS
GCTGCTGAGATCGTGGTCGA+GGG 0.574789 8_1:-51180713 None:intergenic
AACTGGTGGTTTCACAGGAG+AGG 0.575160 8_1:-51181050 None:intergenic
ACAAACGGTGAAGTTGTACT+TGG 0.576267 8_1:-51180182 None:intergenic
TCCAAAAGTTGCAACTCCAA+CGG 0.576649 8_1:+51181072 Msa1199250:CDS
GGCAATGTGGAAGGTGCAGA+TGG 0.577063 8_1:-51180602 None:intergenic
GAGCATTGATTGAGGCTAGA+GGG 0.579571 8_1:-51180130 None:intergenic
GGTGGGAGAATTGCTGGGGA+AGG 0.580187 8_1:-51181622 None:intergenic
GCTGCTGTTGGCAACTTGGA+AGG 0.580282 8_1:-51180773 None:intergenic
AGCTGCAGGCGGTTGAGTGG+TGG 0.580923 8_1:-51180879 None:intergenic
GATTTGACAGGAGCAGCTGT+TGG 0.581655 8_1:-51181268 None:intergenic
GGTTGCACCTGCAAAACCAC+TGG 0.581757 8_1:+51181093 Msa1199250:CDS
GGGGAAGTTGCTACCACAGT+AGG 0.582185 8_1:-51180836 None:intergenic
GAAGTTGGCGAAGCTGCTGT+TGG 0.582733 8_1:-51180785 None:intergenic
GTGATGGTGGGAGAATTGCT+GGG 0.585483 8_1:-51181627 None:intergenic
GGTGCAGATGGATTCGTGGT+TGG 0.586259 8_1:-51180590 None:intergenic
TGTATAATGGCAGTGTTGAA+GGG 0.595029 8_1:-51180313 None:intergenic
GTTGTAACTTTAGGAACCAG+TGG 0.598613 8_1:-51181109 None:intergenic
TTCTAACAAACCCACAGCCA+CGG 0.599602 8_1:+51180244 Msa1199250:CDS
GGTTTAGAAGCTGGTGGCAA+TGG 0.600418 8_1:-51181427 None:intergenic
GATATTACCGCACTAGGACT+GGG 0.602120 8_1:-51181892 None:intergenic
TGGTGCTGCTGCTGAGATCG+TGG 0.602747 8_1:-51180720 None:intergenic
AAATAAACAACAGCCTATTG+TGG 0.603463 8_1:+51180376 Msa1199250:CDS
ACCGCACTAGGACTGGGTGC+TGG 0.604435 8_1:-51181886 None:intergenic
TTGAGGCTAGAGGGTAGCAT+AGG 0.606074 8_1:-51180121 None:intergenic
GCTGGTGTAACCTTTGGGAC+TGG 0.606322 8_1:-51181292 None:intergenic
TGCAGCTGCAGGCGGTTGAG+TGG 0.607510 8_1:-51180882 None:intergenic
TACTACAGTGAGTTCAGATG+AGG 0.608314 8_1:+51181855 Msa1199250:CDS
GGTATCACCAGCACCTGCAA+AGG 0.614130 8_1:+51181456 Msa1199250:CDS
ATGTTGGAGTCGCGACTTTG+GGG 0.616046 8_1:-51180982 None:intergenic
AAACAAACAACAGCCTATTG+TGG 0.620655 8_1:+51180421 Msa1199250:CDS
AAACAAACAACAGCCTATTG+TGG 0.620655 8_1:+51180466 Msa1199250:CDS
ACATCTTTCTCCATTGCACA+TGG 0.621382 8_1:-51182134 None:intergenic
GAAGTTGCTACCACAGTAGG+TGG 0.621383 8_1:-51180833 None:intergenic
GGAAGGTGCAGATGGATTCG+TGG 0.623437 8_1:-51180594 None:intergenic
TGTCAAATCACCAGTCCCAA+AGG 0.624125 8_1:+51181282 Msa1199250:CDS
GGGTCCGATGGATTTGTGGT+TGG 0.624838 8_1:-51180293 None:intergenic
ACCAGCTTCTAAACCACCAA+AGG 0.625434 8_1:+51181435 Msa1199250:CDS
GCAACTTGGAAGGTGCGGCA+GGG 0.627474 8_1:-51180763 None:intergenic
GTTGTACTTGGCAAATTGGA+AGG 0.633363 8_1:-51180170 None:intergenic
TTGGTTGTTTGCTAGACAAG+GGG 0.634527 8_1:-51180856 None:intergenic
ACTACAGTGAGTTCAGATGA+GGG 0.637655 8_1:+51181856 Msa1199250:CDS
TGAGCATTGATTGAGGCTAG+AGG 0.640763 8_1:-51180131 None:intergenic
ACCAGCACCCAGTCCTAGTG+CGG 0.642251 8_1:+51181885 Msa1199250:CDS
ATACAAACAACAGCCTATTG+TGG 0.642615 8_1:+51180331 Msa1199250:CDS
TTTGGTGGTTTAGAAGCTGG+TGG 0.642888 8_1:-51181433 None:intergenic
GCTGGTGGCAATGGTAATGG+TGG 0.643492 8_1:-51181418 None:intergenic
GTAGTATTATCATCAGCTAG+TGG 0.646596 8_1:-51181838 None:intergenic
GTAGGAGAGGTTGCTGCTGG+TGG 0.649813 8_1:-51180680 None:intergenic
GTTGCCAACCACAAATCCAT+CGG 0.651630 8_1:+51180289 Msa1199250:CDS
TAAACAACAGCCTATTGTGG+CGG 0.657290 8_1:+51180379 Msa1199250:CDS
TGGTGCAGCTGCCGTGACCG+TGG 0.659686 8_1:-51180261 None:intergenic
GTATTATCATCAGCTAGTGG+TGG 0.662925 8_1:-51181835 None:intergenic
TTGTTTGTCTAGTGGCAATG+TGG 0.664510 8_1:-51180615 None:intergenic
TGTTGGCAACTTGGAAGGTG+CGG 0.669544 8_1:-51180768 None:intergenic
CAAACAACAGCCTATTGTGG+CGG 0.674147 8_1:+51180424 Msa1199250:CDS
CAAACAACAGCCTATTGTGG+CGG 0.674147 8_1:+51180469 Msa1199250:CDS
TGGTGCAGCTGCCGTAACTG+TGG 0.678692 8_1:-51180558 None:intergenic
AGACAAACAAAAGCCTATTG+TGG 0.680059 8_1:+51180628 Msa1199250:CDS
TGGTTGTTTGCTAGACAAGG+GGG 0.699788 8_1:-51180855 None:intergenic
CAAACCCACAGCCACGGTCA+CGG 0.711372 8_1:+51180250 Msa1199250:CDS
TGATGGTGGGAGAATTGCTG+GGG 0.713120 8_1:-51181626 None:intergenic
ACAGGCGGTATAGATAATGG+TGG 0.715534 8_1:-51181388 None:intergenic
AATGGCAATAGCAAGTACAC+CGG 0.725580 8_1:-51182163 None:intergenic
AATGGTGGAAGTGAAACAGG+CGG 0.734383 8_1:-51181403 None:intergenic
GGGGACAGGTGACTTCACAG+GGG 0.779622 8_1:-51180963 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGTTACAATTATATATTTA+TGG + chr8_1:51181932-51181951 Msa1199250:intron 10.0%
!! ATAAAATTATTTCATATGTA+TGG + chr8_1:51182287-51182306 Msa1199250:three_prime_UTR 10.0%
!! AAGTTACAATTATATATTTA+TGG + chr8_1:51181932-51181951 Msa1199250:intron 10.0%
!! ATAAAATTATTTCATATGTA+TGG + chr8_1:51182287-51182306 Msa1199250:three_prime_UTR 10.0%
!! AATTGTAACTTAAAGTAAAA+TGG - chr8_1:51181923-51181942 None:intergenic 15.0%
!! AAACATAAAATCATAAGATT+TGG - chr8_1:51182092-51182111 None:intergenic 15.0%
!! AATTGTAACTTAAAGTAAAA+TGG - chr8_1:51181923-51181942 None:intergenic 15.0%
!! AAACATAAAATCATAAGATT+TGG - chr8_1:51182092-51182111 None:intergenic 15.0%
!!! ATTATAGTTGGTAATTTGGA+TGG - chr8_1:51180743-51180762 None:intergenic 25.0%
! TATATATTTATGGACCTCTT+TGG + chr8_1:51181942-51181961 Msa1199250:intron 25.0%
!!! ATTGCATGAATTTGTTAATG+CGG - chr8_1:51181979-51181998 None:intergenic 25.0%
!! TGATTTTATGTTTCACAGAA+TGG + chr8_1:51182099-51182118 Msa1199250:intron 25.0%
! TCAAGTTACACATAACAAAA+TGG - chr8_1:51182184-51182203 None:intergenic 25.0%
! CAATACAATGAAAGAACAAA+AGG - chr8_1:51182354-51182373 None:intergenic 25.0%
! TTTGTTCTTTCATTGTATTG+TGG + chr8_1:51182354-51182373 Msa1199250:three_prime_UTR 25.0%
!!! ATTATAGTTGGTAATTTGGA+TGG - chr8_1:51180743-51180762 None:intergenic 25.0%
! TATATATTTATGGACCTCTT+TGG + chr8_1:51181942-51181961 Msa1199250:intron 25.0%
!!! ATTGCATGAATTTGTTAATG+CGG - chr8_1:51181979-51181998 None:intergenic 25.0%
!! TGATTTTATGTTTCACAGAA+TGG + chr8_1:51182099-51182118 Msa1199250:intron 25.0%
! TCAAGTTACACATAACAAAA+TGG - chr8_1:51182184-51182203 None:intergenic 25.0%
! CAATACAATGAAAGAACAAA+AGG - chr8_1:51182354-51182373 None:intergenic 25.0%
! TTTGTTCTTTCATTGTATTG+TGG + chr8_1:51182354-51182373 Msa1199250:three_prime_UTR 25.0%
! ATAGGCTGTTGTTTGTATAA+TGG - chr8_1:51180329-51180348 None:intergenic 30.0%
TGTTTATTTGTACTACTAGC+AGG - chr8_1:51180365-51180384 None:intergenic 30.0%
AAATAAACAACAGCCTATTG+TGG + chr8_1:51180376-51180395 Msa1199250:CDS 30.0%
! CTGTTGTTTGTTTGTATTAC+TGG - chr8_1:51180414-51180433 None:intergenic 30.0%
TGTTTGTTTGTATTACTAGC+AGG - chr8_1:51180500-51180519 None:intergenic 30.0%
!! AGGGATTATAGTTGGTAATT+TGG - chr8_1:51180747-51180766 None:intergenic 30.0%
!!! AAAGAAACAGGTGCTTTTTT+GGG - chr8_1:51181367-51181386 None:intergenic 30.0%
!!! TAAAGAAACAGGTGCTTTTT+TGG - chr8_1:51181368-51181387 None:intergenic 30.0%
!!! GGTTTTTTCTTTTTGTGTGT+TGG - chr8_1:51181586-51181605 None:intergenic 30.0%
!!! TTTTTTTCTCTTGTGCTTGT+GGG - chr8_1:51181719-51181738 None:intergenic 30.0%
ATTGTTGAACTTGAACTTGT+AGG - chr8_1:51181793-51181812 None:intergenic 30.0%
CAAGTTCAACAATCATTAGA+AGG + chr8_1:51181800-51181819 Msa1199250:CDS 30.0%
TATATATAGCATCTTCTGCA+TGG - chr8_1:51182209-51182228 None:intergenic 30.0%
CAGAAGATGCTATATATATC+AGG + chr8_1:51182211-51182230 Msa1199250:three_prime_UTR 30.0%
! ATAGGCTGTTGTTTGTATAA+TGG - chr8_1:51180329-51180348 None:intergenic 30.0%
TGTTTATTTGTACTACTAGC+AGG - chr8_1:51180365-51180384 None:intergenic 30.0%
AAATAAACAACAGCCTATTG+TGG + chr8_1:51180376-51180395 Msa1199250:CDS 30.0%
! CTGTTGTTTGTTTGTATTAC+TGG - chr8_1:51180414-51180433 None:intergenic 30.0%
TGTTTGTTTGTATTACTAGC+AGG - chr8_1:51180500-51180519 None:intergenic 30.0%
!! AGGGATTATAGTTGGTAATT+TGG - chr8_1:51180747-51180766 None:intergenic 30.0%
!!! AAAGAAACAGGTGCTTTTTT+GGG - chr8_1:51181367-51181386 None:intergenic 30.0%
!!! TAAAGAAACAGGTGCTTTTT+TGG - chr8_1:51181368-51181387 None:intergenic 30.0%
!!! GGTTTTTTCTTTTTGTGTGT+TGG - chr8_1:51181586-51181605 None:intergenic 30.0%
!!! TTTTTTTCTCTTGTGCTTGT+GGG - chr8_1:51181719-51181738 None:intergenic 30.0%
ATTGTTGAACTTGAACTTGT+AGG - chr8_1:51181793-51181812 None:intergenic 30.0%
CAAGTTCAACAATCATTAGA+AGG + chr8_1:51181800-51181819 Msa1199250:CDS 30.0%
TATATATAGCATCTTCTGCA+TGG - chr8_1:51182209-51182228 None:intergenic 30.0%
CAGAAGATGCTATATATATC+AGG + chr8_1:51182211-51182230 Msa1199250:three_prime_UTR 30.0%
TGAAGTTGTACTTGGCAAAT+TGG - chr8_1:51180177-51180196 None:intergenic 35.0%
! TGTATAATGGCAGTGTTGAA+GGG - chr8_1:51180316-51180335 None:intergenic 35.0%
! TTGTATAATGGCAGTGTTGA+AGG - chr8_1:51180317-51180336 None:intergenic 35.0%
ATACAAACAACAGCCTATTG+TGG + chr8_1:51180331-51180350 Msa1199250:CDS 35.0%
TGTTTGTTTGTATTACTGGC+AGG - chr8_1:51180410-51180429 None:intergenic 35.0%
AAACAAACAACAGCCTATTG+TGG + chr8_1:51180421-51180440 Msa1199250:CDS 35.0%
TGTTTGTTTGTATTGCTAGC+AGG - chr8_1:51180455-51180474 None:intergenic 35.0%
AAACAAACAACAGCCTATTG+TGG + chr8_1:51180421-51180440 Msa1199250:CDS 35.0%
!! GTTATGGGTTTGTTAGAAGT+AGG - chr8_1:51180539-51180558 None:intergenic 35.0%
!! ATAGGCTTTTGTTTGTCTAG+TGG - chr8_1:51180626-51180645 None:intergenic 35.0%
AGACAAACAAAAGCCTATTG+TGG + chr8_1:51180628-51180647 Msa1199250:CDS 35.0%
!! GGTTGTTTTGTACTACTAAC+AGG - chr8_1:51180662-51180681 None:intergenic 35.0%
! TAGGAACTGGTGATTTTACA+GGG - chr8_1:51180922-51180941 None:intergenic 35.0%
! TTAGGAACTGGTGATTTTAC+AGG - chr8_1:51180923-51180942 None:intergenic 35.0%
TTAATGCTGGTGTAACCTTT+GGG - chr8_1:51181300-51181319 None:intergenic 35.0%
! GATAATGGTGGTAAAGAAAC+AGG - chr8_1:51181379-51181398 None:intergenic 35.0%
!!! TTTTTTCTCTTGTGCTTGTG+GGG - chr8_1:51181718-51181737 None:intergenic 35.0%
!!! GTTTTTTTCTCTTGTGCTTG+TGG - chr8_1:51181720-51181739 None:intergenic 35.0%
GTAGTATTATCATCAGCTAG+TGG - chr8_1:51181841-51181860 None:intergenic 35.0%
GAAAAAGATATTACCGCACT+AGG - chr8_1:51181901-51181920 None:intergenic 35.0%
ATACAGATTGTACTCTGACT+TGG + chr8_1:51182003-51182022 Msa1199250:intron 35.0%
ATTCATCCGAAGATGTTACT+TGG + chr8_1:51182253-51182272 Msa1199250:three_prime_UTR 35.0%
TGCAAACCAAGTAACATCTT+CGG - chr8_1:51182262-51182281 None:intergenic 35.0%
TGAAGTTGTACTTGGCAAAT+TGG - chr8_1:51180177-51180196 None:intergenic 35.0%
! TGTATAATGGCAGTGTTGAA+GGG - chr8_1:51180316-51180335 None:intergenic 35.0%
! TTGTATAATGGCAGTGTTGA+AGG - chr8_1:51180317-51180336 None:intergenic 35.0%
ATACAAACAACAGCCTATTG+TGG + chr8_1:51180331-51180350 Msa1199250:CDS 35.0%
TGTTTGTTTGTATTACTGGC+AGG - chr8_1:51180410-51180429 None:intergenic 35.0%
AAACAAACAACAGCCTATTG+TGG + chr8_1:51180421-51180440 Msa1199250:CDS 35.0%
TGTTTGTTTGTATTGCTAGC+AGG - chr8_1:51180455-51180474 None:intergenic 35.0%
AAACAAACAACAGCCTATTG+TGG + chr8_1:51180421-51180440 Msa1199250:CDS 35.0%
!! GTTATGGGTTTGTTAGAAGT+AGG - chr8_1:51180539-51180558 None:intergenic 35.0%
!! ATAGGCTTTTGTTTGTCTAG+TGG - chr8_1:51180626-51180645 None:intergenic 35.0%
AGACAAACAAAAGCCTATTG+TGG + chr8_1:51180628-51180647 Msa1199250:CDS 35.0%
!! GGTTGTTTTGTACTACTAAC+AGG - chr8_1:51180662-51180681 None:intergenic 35.0%
! TAGGAACTGGTGATTTTACA+GGG - chr8_1:51180922-51180941 None:intergenic 35.0%
! TTAGGAACTGGTGATTTTAC+AGG - chr8_1:51180923-51180942 None:intergenic 35.0%
TTAATGCTGGTGTAACCTTT+GGG - chr8_1:51181300-51181319 None:intergenic 35.0%
! GATAATGGTGGTAAAGAAAC+AGG - chr8_1:51181379-51181398 None:intergenic 35.0%
!!! TTTTTTCTCTTGTGCTTGTG+GGG - chr8_1:51181718-51181737 None:intergenic 35.0%
!!! GTTTTTTTCTCTTGTGCTTG+TGG - chr8_1:51181720-51181739 None:intergenic 35.0%
GTAGTATTATCATCAGCTAG+TGG - chr8_1:51181841-51181860 None:intergenic 35.0%
GAAAAAGATATTACCGCACT+AGG - chr8_1:51181901-51181920 None:intergenic 35.0%
ATACAGATTGTACTCTGACT+TGG + chr8_1:51182003-51182022 Msa1199250:intron 35.0%
ATTCATCCGAAGATGTTACT+TGG + chr8_1:51182253-51182272 Msa1199250:three_prime_UTR 35.0%
TGCAAACCAAGTAACATCTT+CGG - chr8_1:51182262-51182281 None:intergenic 35.0%
!! CTGTGATTGAGCATTGATTG+AGG - chr8_1:51180141-51180160 None:intergenic 40.0%
CTCAATCAATGCTCAATCAC+AGG + chr8_1:51180139-51180158 Msa1199250:CDS 40.0%
GTTGTACTTGGCAAATTGGA+AGG - chr8_1:51180173-51180192 None:intergenic 40.0%
ACAAACGGTGAAGTTGTACT+TGG - chr8_1:51180185-51180204 None:intergenic 40.0%
!! GGTTGTTGTTTCGCTACAAA+CGG - chr8_1:51180200-51180219 None:intergenic 40.0%
TAAACAACAGCCTATTGTGG+CGG + chr8_1:51180379-51180398 Msa1199250:CDS 40.0%
CAAACCCATAACCACAGTTA+CGG + chr8_1:51180547-51180566 Msa1199250:CDS 40.0%
TTGTTTGTCTAGTGGCAATG+TGG - chr8_1:51180618-51180637 None:intergenic 40.0%
TGCTAAAAAACCACCTACTG+TGG + chr8_1:51180823-51180842 Msa1199250:CDS 40.0%
! TTGGTTGTTTGCTAGACAAG+GGG - chr8_1:51180859-51180878 None:intergenic 40.0%
! GTTGGTTGTTTGCTAGACAA+GGG - chr8_1:51180860-51180879 None:intergenic 40.0%
!!! TTTTGGAACTGGTGACTTCA+CGG - chr8_1:51181014-51181033 None:intergenic 40.0%
TCCAAAAGTTGCAACTCCAA+CGG + chr8_1:51181072-51181091 Msa1199250:CDS 40.0%
! GTTGTAACTTTAGGAACCAG+TGG - chr8_1:51181112-51181131 None:intergenic 40.0%
GCTGTTGGAGTTGTAACTTT+AGG - chr8_1:51181121-51181140 None:intergenic 40.0%
! GATGTTGGAGTTGTAGCTTT+TGG - chr8_1:51181166-51181185 None:intergenic 40.0%
!!! GGTTTTGATTTTGGAACTGG+TGG - chr8_1:51181247-51181266 None:intergenic 40.0%
!!! GGAGGTTTTGATTTTGGAAC+TGG - chr8_1:51181250-51181269 None:intergenic 40.0%
!!! GCTGTTGGAGGTTTTGATTT+TGG - chr8_1:51181256-51181275 None:intergenic 40.0%
CTTAATGCTGGTGTAACCTT+TGG - chr8_1:51181301-51181320 None:intergenic 40.0%
!! TTTTAGGGGATGGGGATTTT+GGG - chr8_1:51181324-51181343 None:intergenic 40.0%
!! ATTTTAGGGGATGGGGATTT+TGG - chr8_1:51181325-51181344 None:intergenic 40.0%
!! TGGTTGAATTTTAGGGGATG+GGG - chr8_1:51181332-51181351 None:intergenic 40.0%
!! GTGGTTGAATTTTAGGGGAT+GGG - chr8_1:51181333-51181352 None:intergenic 40.0%
!!! TGGTGGTGGTTGAATTTTAG+GGG - chr8_1:51181338-51181357 None:intergenic 40.0%
!!! GTGGTGGTGGTTGAATTTTA+GGG - chr8_1:51181339-51181358 None:intergenic 40.0%
!!! TGTGGTGGTGGTTGAATTTT+AGG - chr8_1:51181340-51181359 None:intergenic 40.0%
GAAACAGGCGGTATAGATAA+TGG - chr8_1:51181394-51181413 None:intergenic 40.0%
! TTCTTTTTGTGTGTAGGTGC+TGG - chr8_1:51181520-51181539 None:intergenic 40.0%
! GGTGCTTTCTTTTTGTGTGT+AGG - chr8_1:51181526-51181545 None:intergenic 40.0%
!! TTCTTTTTGTGTGTTGGTGC+TGG - chr8_1:51181580-51181599 None:intergenic 40.0%
!! GAAGGAACTGGTGATGATTT+TGG - chr8_1:51181607-51181626 None:intergenic 40.0%
GAACTTGAACTTGTAGGTTC+TGG - chr8_1:51181787-51181806 None:intergenic 40.0%
GTATTATCATCAGCTAGTGG+TGG - chr8_1:51181838-51181857 None:intergenic 40.0%
TACTACAGTGAGTTCAGATG+AGG + chr8_1:51181855-51181874 Msa1199250:CDS 40.0%
ACTACAGTGAGTTCAGATGA+GGG + chr8_1:51181856-51181875 Msa1199250:CDS 40.0%
CACAATCTTACCATGTGCAA+TGG + chr8_1:51182124-51182143 Msa1199250:CDS 40.0%
ACATCTTTCTCCATTGCACA+TGG - chr8_1:51182137-51182156 None:intergenic 40.0%
TGGAGAAAGATGTTGTCAAC+CGG + chr8_1:51182144-51182163 Msa1199250:CDS 40.0%
AATGGCAATAGCAAGTACAC+CGG - chr8_1:51182166-51182185 None:intergenic 40.0%
CAGGCTCATATGACAAAACA+TGG + chr8_1:51182230-51182249 Msa1199250:three_prime_UTR 40.0%
!! CTGTGATTGAGCATTGATTG+AGG - chr8_1:51180141-51180160 None:intergenic 40.0%
CTCAATCAATGCTCAATCAC+AGG + chr8_1:51180139-51180158 Msa1199250:CDS 40.0%
GTTGTACTTGGCAAATTGGA+AGG - chr8_1:51180173-51180192 None:intergenic 40.0%
ACAAACGGTGAAGTTGTACT+TGG - chr8_1:51180185-51180204 None:intergenic 40.0%
!! GGTTGTTGTTTCGCTACAAA+CGG - chr8_1:51180200-51180219 None:intergenic 40.0%
TAAACAACAGCCTATTGTGG+CGG + chr8_1:51180379-51180398 Msa1199250:CDS 40.0%
CAAACCCATAACCACAGTTA+CGG + chr8_1:51180547-51180566 Msa1199250:CDS 40.0%
TTGTTTGTCTAGTGGCAATG+TGG - chr8_1:51180618-51180637 None:intergenic 40.0%
TGCTAAAAAACCACCTACTG+TGG + chr8_1:51180823-51180842 Msa1199250:CDS 40.0%
! TTGGTTGTTTGCTAGACAAG+GGG - chr8_1:51180859-51180878 None:intergenic 40.0%
! GTTGGTTGTTTGCTAGACAA+GGG - chr8_1:51180860-51180879 None:intergenic 40.0%
!!! TTTTGGAACTGGTGACTTCA+CGG - chr8_1:51181014-51181033 None:intergenic 40.0%
TCCAAAAGTTGCAACTCCAA+CGG + chr8_1:51181072-51181091 Msa1199250:CDS 40.0%
! GTTGTAACTTTAGGAACCAG+TGG - chr8_1:51181112-51181131 None:intergenic 40.0%
GCTGTTGGAGTTGTAACTTT+AGG - chr8_1:51181121-51181140 None:intergenic 40.0%
! GATGTTGGAGTTGTAGCTTT+TGG - chr8_1:51181166-51181185 None:intergenic 40.0%
!!! GGTTTTGATTTTGGAACTGG+TGG - chr8_1:51181247-51181266 None:intergenic 40.0%
!!! GGAGGTTTTGATTTTGGAAC+TGG - chr8_1:51181250-51181269 None:intergenic 40.0%
!!! GCTGTTGGAGGTTTTGATTT+TGG - chr8_1:51181256-51181275 None:intergenic 40.0%
CTTAATGCTGGTGTAACCTT+TGG - chr8_1:51181301-51181320 None:intergenic 40.0%
!! TTTTAGGGGATGGGGATTTT+GGG - chr8_1:51181324-51181343 None:intergenic 40.0%
!! ATTTTAGGGGATGGGGATTT+TGG - chr8_1:51181325-51181344 None:intergenic 40.0%
!! TGGTTGAATTTTAGGGGATG+GGG - chr8_1:51181332-51181351 None:intergenic 40.0%
!! GTGGTTGAATTTTAGGGGAT+GGG - chr8_1:51181333-51181352 None:intergenic 40.0%
!!! TGGTGGTGGTTGAATTTTAG+GGG - chr8_1:51181338-51181357 None:intergenic 40.0%
!!! GTGGTGGTGGTTGAATTTTA+GGG - chr8_1:51181339-51181358 None:intergenic 40.0%
!!! TGTGGTGGTGGTTGAATTTT+AGG - chr8_1:51181340-51181359 None:intergenic 40.0%
GAAACAGGCGGTATAGATAA+TGG - chr8_1:51181394-51181413 None:intergenic 40.0%
! TTCTTTTTGTGTGTAGGTGC+TGG - chr8_1:51181520-51181539 None:intergenic 40.0%
! GGTGCTTTCTTTTTGTGTGT+AGG - chr8_1:51181526-51181545 None:intergenic 40.0%
!! TTCTTTTTGTGTGTTGGTGC+TGG - chr8_1:51181580-51181599 None:intergenic 40.0%
!! GAAGGAACTGGTGATGATTT+TGG - chr8_1:51181607-51181626 None:intergenic 40.0%
GAACTTGAACTTGTAGGTTC+TGG - chr8_1:51181787-51181806 None:intergenic 40.0%
GTATTATCATCAGCTAGTGG+TGG - chr8_1:51181838-51181857 None:intergenic 40.0%
TACTACAGTGAGTTCAGATG+AGG + chr8_1:51181855-51181874 Msa1199250:CDS 40.0%
ACTACAGTGAGTTCAGATGA+GGG + chr8_1:51181856-51181875 Msa1199250:CDS 40.0%
CACAATCTTACCATGTGCAA+TGG + chr8_1:51182124-51182143 Msa1199250:CDS 40.0%
ACATCTTTCTCCATTGCACA+TGG - chr8_1:51182137-51182156 None:intergenic 40.0%
TGGAGAAAGATGTTGTCAAC+CGG + chr8_1:51182144-51182163 Msa1199250:CDS 40.0%
AATGGCAATAGCAAGTACAC+CGG - chr8_1:51182166-51182185 None:intergenic 40.0%
CAGGCTCATATGACAAAACA+TGG + chr8_1:51182230-51182249 Msa1199250:three_prime_UTR 40.0%
!! GAGCATTGATTGAGGCTAGA+GGG - chr8_1:51180133-51180152 None:intergenic 45.0%
!! TGAGCATTGATTGAGGCTAG+AGG - chr8_1:51180134-51180153 None:intergenic 45.0%
!! GCTGTGGGTTTGTTAGAAGT+AGG - chr8_1:51180242-51180261 None:intergenic 45.0%
TTCTAACAAACCCACAGCCA+CGG + chr8_1:51180244-51180263 Msa1199250:CDS 45.0%
TTTGTGGTTGGCAACTTCGA+TGG - chr8_1:51180284-51180303 None:intergenic 45.0%
GTTGCCAACCACAAATCCAT+CGG + chr8_1:51180289-51180308 Msa1199250:CDS 45.0%
CAAACAACAGCCTATTGTGG+CGG + chr8_1:51180334-51180353 Msa1199250:CDS 45.0%
CAAACAACAGCCTATTGTGG+CGG + chr8_1:51180334-51180353 Msa1199250:CDS 45.0%
TTGTCTAGTGGCAATGTGGA+AGG - chr8_1:51180614-51180633 None:intergenic 45.0%
!! GGGTTTGTTAGAAGTAGGAG+AGG - chr8_1:51180237-51180256 None:intergenic 45.0%
!! GTCGAGGGTTTGTTAGAAGT+AGG - chr8_1:51180701-51180720 None:intergenic 45.0%
GCAGATGGTGTACTAGAAGT+TGG - chr8_1:51180803-51180822 None:intergenic 45.0%
!!! GGTGGTTTTTTAGCAGCAGA+TGG - chr8_1:51180818-51180837 None:intergenic 45.0%
! TGGTTGTTTGCTAGACAAGG+GGG - chr8_1:51180858-51180877 None:intergenic 45.0%
! GGTTGGTTGTTTGCTAGACA+AGG - chr8_1:51180861-51180880 None:intergenic 45.0%
! ACTGGTGATTTTACAGGGCT+TGG - chr8_1:51180917-51180936 None:intergenic 45.0%
! GGAGACGTAACTTTAGGAAC+TGG - chr8_1:51180935-51180954 None:intergenic 45.0%
GATGCTGGAGACGTAACTTT+AGG - chr8_1:51180941-51180960 None:intergenic 45.0%
! TTTGGAACTGGTGACTTCAC+GGG - chr8_1:51181013-51181032 None:intergenic 45.0%
! TTTGGAACTGGTGGTTTCAC+AGG - chr8_1:51181058-51181077 None:intergenic 45.0%
!!! GTTGCAACTTTTGGAACTGG+TGG - chr8_1:51181067-51181086 None:intergenic 45.0%
!!! GGAGTTGCAACTTTTGGAAC+TGG - chr8_1:51181070-51181089 None:intergenic 45.0%
! ACCGTTGGAGTTGCAACTTT+TGG - chr8_1:51181076-51181095 None:intergenic 45.0%
!! TTAGGAACCAGTGGTTTTGC+AGG - chr8_1:51181103-51181122 None:intergenic 45.0%
! TTTGGAACCAGTGGTTTCAC+AGG - chr8_1:51181148-51181167 None:intergenic 45.0%
!!! GTTGTAGCTTTTGGAACCAG+TGG - chr8_1:51181157-51181176 None:intergenic 45.0%
TTCGGAACTGGTGGTTTCAA+AGG - chr8_1:51181193-51181212 None:intergenic 45.0%
! GGTTTCACAGGAGAAGGTTT+TGG - chr8_1:51181226-51181245 None:intergenic 45.0%
! TTTGGAACTGGTGGTTTCAC+AGG - chr8_1:51181058-51181077 None:intergenic 45.0%
! TTTGGGACTGGTGATTTGAC+AGG - chr8_1:51181283-51181302 None:intergenic 45.0%
TGTCAAATCACCAGTCCCAA+AGG + chr8_1:51181282-51181301 Msa1199250:CDS 45.0%
!! GGTGGTTGAATTTTAGGGGA+TGG - chr8_1:51181334-51181353 None:intergenic 45.0%
!!! GAAACAGGTGCTTTTTTGGG+TGG - chr8_1:51181364-51181383 None:intergenic 45.0%
! ACAGGCGGTATAGATAATGG+TGG - chr8_1:51181391-51181410 None:intergenic 45.0%
! AATGGTGGAAGTGAAACAGG+CGG - chr8_1:51181406-51181425 None:intergenic 45.0%
! GGTAATGGTGGAAGTGAAAC+AGG - chr8_1:51181409-51181428 None:intergenic 45.0%
! TTTGGTGGTTTAGAAGCTGG+TGG - chr8_1:51181436-51181455 None:intergenic 45.0%
ACCAGCTTCTAAACCACCAA+AGG + chr8_1:51181435-51181454 Msa1199250:CDS 45.0%
! ACCTTTGGTGGTTTAGAAGC+TGG - chr8_1:51181439-51181458 None:intergenic 45.0%
!! TCTATTGTAGGTGTTGGTGC+AGG - chr8_1:51181652-51181671 None:intergenic 45.0%
GGTGTGTCTATTGTAGGTGT+TGG - chr8_1:51181658-51181677 None:intergenic 45.0%
GATATTACCGCACTAGGACT+GGG - chr8_1:51181895-51181914 None:intergenic 45.0%
AGATATTACCGCACTAGGAC+TGG - chr8_1:51181896-51181915 None:intergenic 45.0%
CGGCATAATCAAGACCAAAG+AGG - chr8_1:51181959-51181978 None:intergenic 45.0%
!! GAGCATTGATTGAGGCTAGA+GGG - chr8_1:51180133-51180152 None:intergenic 45.0%
!! TGAGCATTGATTGAGGCTAG+AGG - chr8_1:51180134-51180153 None:intergenic 45.0%
!! GCTGTGGGTTTGTTAGAAGT+AGG - chr8_1:51180242-51180261 None:intergenic 45.0%
TTCTAACAAACCCACAGCCA+CGG + chr8_1:51180244-51180263 Msa1199250:CDS 45.0%
TTTGTGGTTGGCAACTTCGA+TGG - chr8_1:51180284-51180303 None:intergenic 45.0%
GTTGCCAACCACAAATCCAT+CGG + chr8_1:51180289-51180308 Msa1199250:CDS 45.0%
CAAACAACAGCCTATTGTGG+CGG + chr8_1:51180334-51180353 Msa1199250:CDS 45.0%
CAAACAACAGCCTATTGTGG+CGG + chr8_1:51180334-51180353 Msa1199250:CDS 45.0%
TTGTCTAGTGGCAATGTGGA+AGG - chr8_1:51180614-51180633 None:intergenic 45.0%
!! GGGTTTGTTAGAAGTAGGAG+AGG - chr8_1:51180237-51180256 None:intergenic 45.0%
!! GTCGAGGGTTTGTTAGAAGT+AGG - chr8_1:51180701-51180720 None:intergenic 45.0%
GCAGATGGTGTACTAGAAGT+TGG - chr8_1:51180803-51180822 None:intergenic 45.0%
!!! GGTGGTTTTTTAGCAGCAGA+TGG - chr8_1:51180818-51180837 None:intergenic 45.0%
! TGGTTGTTTGCTAGACAAGG+GGG - chr8_1:51180858-51180877 None:intergenic 45.0%
! GGTTGGTTGTTTGCTAGACA+AGG - chr8_1:51180861-51180880 None:intergenic 45.0%
! ACTGGTGATTTTACAGGGCT+TGG - chr8_1:51180917-51180936 None:intergenic 45.0%
! GGAGACGTAACTTTAGGAAC+TGG - chr8_1:51180935-51180954 None:intergenic 45.0%
GATGCTGGAGACGTAACTTT+AGG - chr8_1:51180941-51180960 None:intergenic 45.0%
! TTTGGAACTGGTGACTTCAC+GGG - chr8_1:51181013-51181032 None:intergenic 45.0%
! TTTGGAACTGGTGGTTTCAC+AGG - chr8_1:51181058-51181077 None:intergenic 45.0%
!!! GTTGCAACTTTTGGAACTGG+TGG - chr8_1:51181067-51181086 None:intergenic 45.0%
!!! GGAGTTGCAACTTTTGGAAC+TGG - chr8_1:51181070-51181089 None:intergenic 45.0%
! ACCGTTGGAGTTGCAACTTT+TGG - chr8_1:51181076-51181095 None:intergenic 45.0%
!! TTAGGAACCAGTGGTTTTGC+AGG - chr8_1:51181103-51181122 None:intergenic 45.0%
! TTTGGAACCAGTGGTTTCAC+AGG - chr8_1:51181148-51181167 None:intergenic 45.0%
!!! GTTGTAGCTTTTGGAACCAG+TGG - chr8_1:51181157-51181176 None:intergenic 45.0%
TTCGGAACTGGTGGTTTCAA+AGG - chr8_1:51181193-51181212 None:intergenic 45.0%
! GGTTTCACAGGAGAAGGTTT+TGG - chr8_1:51181226-51181245 None:intergenic 45.0%
! TTTGGAACTGGTGGTTTCAC+AGG - chr8_1:51181058-51181077 None:intergenic 45.0%
! TTTGGGACTGGTGATTTGAC+AGG - chr8_1:51181283-51181302 None:intergenic 45.0%
TGTCAAATCACCAGTCCCAA+AGG + chr8_1:51181282-51181301 Msa1199250:CDS 45.0%
!! GGTGGTTGAATTTTAGGGGA+TGG - chr8_1:51181334-51181353 None:intergenic 45.0%
!!! GAAACAGGTGCTTTTTTGGG+TGG - chr8_1:51181364-51181383 None:intergenic 45.0%
! ACAGGCGGTATAGATAATGG+TGG - chr8_1:51181391-51181410 None:intergenic 45.0%
! AATGGTGGAAGTGAAACAGG+CGG - chr8_1:51181406-51181425 None:intergenic 45.0%
! GGTAATGGTGGAAGTGAAAC+AGG - chr8_1:51181409-51181428 None:intergenic 45.0%
! TTTGGTGGTTTAGAAGCTGG+TGG - chr8_1:51181436-51181455 None:intergenic 45.0%
ACCAGCTTCTAAACCACCAA+AGG + chr8_1:51181435-51181454 Msa1199250:CDS 45.0%
! ACCTTTGGTGGTTTAGAAGC+TGG - chr8_1:51181439-51181458 None:intergenic 45.0%
!! TCTATTGTAGGTGTTGGTGC+AGG - chr8_1:51181652-51181671 None:intergenic 45.0%
GGTGTGTCTATTGTAGGTGT+TGG - chr8_1:51181658-51181677 None:intergenic 45.0%
GATATTACCGCACTAGGACT+GGG - chr8_1:51181895-51181914 None:intergenic 45.0%
AGATATTACCGCACTAGGAC+TGG - chr8_1:51181896-51181915 None:intergenic 45.0%
CGGCATAATCAAGACCAAAG+AGG - chr8_1:51181959-51181978 None:intergenic 45.0%
TTGAGGCTAGAGGGTAGCAT+AGG - chr8_1:51180124-51180143 None:intergenic 50.0%
GGAGAAGTTGCTGCTACAAC+AGG - chr8_1:51180221-51180240 None:intergenic 50.0%
! TGAAGGGTCCGATGGATTTG+TGG - chr8_1:51180300-51180319 None:intergenic 50.0%
GAAGTAGGAGAAGTTGCTGC+AGG - chr8_1:51180227-51180246 None:intergenic 50.0%
GCTGCCGTAACTGTGGTTAT+GGG - chr8_1:51180554-51180573 None:intergenic 50.0%
AGCTGCCGTAACTGTGGTTA+TGG - chr8_1:51180555-51180574 None:intergenic 50.0%
TTCGTGGTTGGCAACTTCGA+TGG - chr8_1:51180581-51180600 None:intergenic 50.0%
ACAGGAGTTGCTGCCACAAT+AGG - chr8_1:51180644-51180663 None:intergenic 50.0%
TGTTGGCAACTTGGAAGGTG+CGG - chr8_1:51180771-51180790 None:intergenic 50.0%
GAAGTTGCTACCACAGTAGG+TGG - chr8_1:51180836-51180855 None:intergenic 50.0%
! GATGATTTTGCAGCTGCAGG+CGG - chr8_1:51180893-51180912 None:intergenic 50.0%
! GGAGATGATTTTGCAGCTGC+AGG - chr8_1:51180896-51180915 None:intergenic 50.0%
ATGTTGGAGTCGCGACTTTG+GGG - chr8_1:51180985-51181004 None:intergenic 50.0%
GATGTTGGAGTCGCGACTTT+GGG - chr8_1:51180986-51181005 None:intergenic 50.0%
AGATGTTGGAGTCGCGACTT+TGG - chr8_1:51180987-51181006 None:intergenic 50.0%
!!! GGAGTCGTAGCTTTTGGAAC+TGG - chr8_1:51181025-51181044 None:intergenic 50.0%
! GCTGTTGGAGTCGTAGCTTT+TGG - chr8_1:51181031-51181050 None:intergenic 50.0%
AACTGGTGGTTTCACAGGAG+AGG - chr8_1:51181053-51181072 None:intergenic 50.0%
! GGTTTCAAAGGCGCAGATGT+TGG - chr8_1:51181181-51181200 None:intergenic 50.0%
!! ACAGGAGAAGGTTTTGGTGC+GGG - chr8_1:51181220-51181239 None:intergenic 50.0%
!! CACAGGAGAAGGTTTTGGTG+CGG - chr8_1:51181221-51181240 None:intergenic 50.0%
ACTGGTGGTTTCACAGGAGA+AGG - chr8_1:51181052-51181071 None:intergenic 50.0%
GATTTGACAGGAGCAGCTGT+TGG - chr8_1:51181271-51181290 None:intergenic 50.0%
! GGGGATTTTGGGCTTAATGC+TGG - chr8_1:51181313-51181332 None:intergenic 50.0%
!!! TTTTTGGGTGGATGTGGTGG+TGG - chr8_1:51181352-51181371 None:intergenic 50.0%
!!! GCTTTTTTGGGTGGATGTGG+TGG - chr8_1:51181355-51181374 None:intergenic 50.0%
!!! GGTGCTTTTTTGGGTGGATG+TGG - chr8_1:51181358-51181377 None:intergenic 50.0%
GAAGCTGGTGGCAATGGTAA+TGG - chr8_1:51181424-51181443 None:intergenic 50.0%
GGTTTAGAAGCTGGTGGCAA+TGG - chr8_1:51181430-51181449 None:intergenic 50.0%
TTTGGTACCTTTGCAGGTGC+TGG - chr8_1:51181466-51181485 None:intergenic 50.0%
! GGTGCTTTTGGTACCTTTGC+AGG - chr8_1:51181472-51181491 None:intergenic 50.0%
GGTGTTTCTTTGTCTGGTGC+GGG - chr8_1:51181553-51181572 None:intergenic 50.0%
CGGTGTTTCTTTGTCTGGTG+CGG - chr8_1:51181554-51181573 None:intergenic 50.0%
CGCACCAGACAAAGAAACAC+CGG + chr8_1:51181552-51181571 Msa1199250:CDS 50.0%
AGAATTGCTGGGGAAGGAAC+TGG - chr8_1:51181619-51181638 None:intergenic 50.0%
!! TGATGGTGGGAGAATTGCTG+GGG - chr8_1:51181629-51181648 None:intergenic 50.0%
!! GTGATGGTGGGAGAATTGCT+GGG - chr8_1:51181630-51181649 None:intergenic 50.0%
!! GGTGCTGGTGTGTCTATTGT+AGG - chr8_1:51181664-51181683 None:intergenic 50.0%
! GGTTCTGGTGCATCATCTTC+AGG - chr8_1:51181691-51181710 None:intergenic 50.0%
TTTCTCTTGTGCTTGTGGGG+TGG - chr8_1:51181715-51181734 None:intergenic 50.0%
TTGAGGCTAGAGGGTAGCAT+AGG - chr8_1:51180124-51180143 None:intergenic 50.0%
GGAGAAGTTGCTGCTACAAC+AGG - chr8_1:51180221-51180240 None:intergenic 50.0%
! TGAAGGGTCCGATGGATTTG+TGG - chr8_1:51180300-51180319 None:intergenic 50.0%
GAAGTAGGAGAAGTTGCTGC+AGG - chr8_1:51180227-51180246 None:intergenic 50.0%
GCTGCCGTAACTGTGGTTAT+GGG - chr8_1:51180554-51180573 None:intergenic 50.0%
AGCTGCCGTAACTGTGGTTA+TGG - chr8_1:51180555-51180574 None:intergenic 50.0%
TTCGTGGTTGGCAACTTCGA+TGG - chr8_1:51180581-51180600 None:intergenic 50.0%
ACAGGAGTTGCTGCCACAAT+AGG - chr8_1:51180644-51180663 None:intergenic 50.0%
TGTTGGCAACTTGGAAGGTG+CGG - chr8_1:51180771-51180790 None:intergenic 50.0%
GAAGTTGCTACCACAGTAGG+TGG - chr8_1:51180836-51180855 None:intergenic 50.0%
! GATGATTTTGCAGCTGCAGG+CGG - chr8_1:51180893-51180912 None:intergenic 50.0%
! GGAGATGATTTTGCAGCTGC+AGG - chr8_1:51180896-51180915 None:intergenic 50.0%
ATGTTGGAGTCGCGACTTTG+GGG - chr8_1:51180985-51181004 None:intergenic 50.0%
GATGTTGGAGTCGCGACTTT+GGG - chr8_1:51180986-51181005 None:intergenic 50.0%
AGATGTTGGAGTCGCGACTT+TGG - chr8_1:51180987-51181006 None:intergenic 50.0%
!!! GGAGTCGTAGCTTTTGGAAC+TGG - chr8_1:51181025-51181044 None:intergenic 50.0%
! GCTGTTGGAGTCGTAGCTTT+TGG - chr8_1:51181031-51181050 None:intergenic 50.0%
AACTGGTGGTTTCACAGGAG+AGG - chr8_1:51181053-51181072 None:intergenic 50.0%
! GGTTTCAAAGGCGCAGATGT+TGG - chr8_1:51181181-51181200 None:intergenic 50.0%
!! ACAGGAGAAGGTTTTGGTGC+GGG - chr8_1:51181220-51181239 None:intergenic 50.0%
!! CACAGGAGAAGGTTTTGGTG+CGG - chr8_1:51181221-51181240 None:intergenic 50.0%
ACTGGTGGTTTCACAGGAGA+AGG - chr8_1:51181052-51181071 None:intergenic 50.0%
GATTTGACAGGAGCAGCTGT+TGG - chr8_1:51181271-51181290 None:intergenic 50.0%
! GGGGATTTTGGGCTTAATGC+TGG - chr8_1:51181313-51181332 None:intergenic 50.0%
!!! TTTTTGGGTGGATGTGGTGG+TGG - chr8_1:51181352-51181371 None:intergenic 50.0%
!!! GCTTTTTTGGGTGGATGTGG+TGG - chr8_1:51181355-51181374 None:intergenic 50.0%
!!! GGTGCTTTTTTGGGTGGATG+TGG - chr8_1:51181358-51181377 None:intergenic 50.0%
GAAGCTGGTGGCAATGGTAA+TGG - chr8_1:51181424-51181443 None:intergenic 50.0%
GGTTTAGAAGCTGGTGGCAA+TGG - chr8_1:51181430-51181449 None:intergenic 50.0%
TTTGGTACCTTTGCAGGTGC+TGG - chr8_1:51181466-51181485 None:intergenic 50.0%
! GGTGCTTTTGGTACCTTTGC+AGG - chr8_1:51181472-51181491 None:intergenic 50.0%
GGTGTTTCTTTGTCTGGTGC+GGG - chr8_1:51181553-51181572 None:intergenic 50.0%
CGGTGTTTCTTTGTCTGGTG+CGG - chr8_1:51181554-51181573 None:intergenic 50.0%
CGCACCAGACAAAGAAACAC+CGG + chr8_1:51181552-51181571 Msa1199250:CDS 50.0%
AGAATTGCTGGGGAAGGAAC+TGG - chr8_1:51181619-51181638 None:intergenic 50.0%
!! TGATGGTGGGAGAATTGCTG+GGG - chr8_1:51181629-51181648 None:intergenic 50.0%
!! GTGATGGTGGGAGAATTGCT+GGG - chr8_1:51181630-51181649 None:intergenic 50.0%
!! GGTGCTGGTGTGTCTATTGT+AGG - chr8_1:51181664-51181683 None:intergenic 50.0%
! GGTTCTGGTGCATCATCTTC+AGG - chr8_1:51181691-51181710 None:intergenic 50.0%
TTTCTCTTGTGCTTGTGGGG+TGG - chr8_1:51181715-51181734 None:intergenic 50.0%
!! GGCTGCAGTGTTTTGGGCAT+TGG + chr8_1:51180088-51180107 Msa1199250:CDS 55.0%
! GGGTCCGATGGATTTGTGGT+TGG - chr8_1:51180296-51180315 None:intergenic 55.0%
GCAGGAGTTGCTGCCACAAT+AGG - chr8_1:51180347-51180366 None:intergenic 55.0%
! GGTGCAGATGGATTCGTGGT+TGG - chr8_1:51180593-51180612 None:intergenic 55.0%
! GGAAGGTGCAGATGGATTCG+TGG - chr8_1:51180597-51180616 None:intergenic 55.0%
! GGCAATGTGGAAGGTGCAGA+TGG - chr8_1:51180605-51180624 None:intergenic 55.0%
GAAGTAGGAGAGGTTGCTGC+TGG - chr8_1:51180686-51180705 None:intergenic 55.0%
GGTGCGGCAGGGATTATAGT+TGG - chr8_1:51180755-51180774 None:intergenic 55.0%
GCTGCTGTTGGCAACTTGGA+AGG - chr8_1:51180776-51180795 None:intergenic 55.0%
CGAAGCTGCTGTTGGCAACT+TGG - chr8_1:51180780-51180799 None:intergenic 55.0%
GAAGTTGGCGAAGCTGCTGT+TGG - chr8_1:51180788-51180807 None:intergenic 55.0%
GGGGAAGTTGCTACCACAGT+AGG - chr8_1:51180839-51180858 None:intergenic 55.0%
GACTTCACAGGGGAAGATGC+TGG - chr8_1:51180956-51180975 None:intergenic 55.0%
TGGGGACAGGTGACTTCACA+GGG - chr8_1:51180967-51180986 None:intergenic 55.0%
TTGGGGACAGGTGACTTCAC+AGG - chr8_1:51180968-51180987 None:intergenic 55.0%
GACTTCACGGGAGCAGATGT+TGG - chr8_1:51181001-51181020 None:intergenic 55.0%
GGTTTCACAGGAGAGGCTGT+TGG - chr8_1:51181046-51181065 None:intergenic 55.0%
! GGTTTTGCAGGTGCAACCGT+TGG - chr8_1:51181091-51181110 None:intergenic 55.0%
GGTTGCACCTGCAAAACCAC+TGG + chr8_1:51181093-51181112 Msa1199250:CDS 55.0%
GGTTTCACAGGTGCAGCTGT+TGG - chr8_1:51181136-51181155 None:intergenic 55.0%
AGCTGCACCTGTGAAACCAC+TGG + chr8_1:51181138-51181157 Msa1199250:CDS 55.0%
!! GGTTTTGGTGCGGGAGCTTT+CGG - chr8_1:51181211-51181230 None:intergenic 55.0%
TTGACAGGAGCAGCTGTTGG+AGG - chr8_1:51181268-51181287 None:intergenic 55.0%
!! GCTGGTGTAACCTTTGGGAC+TGG - chr8_1:51181295-51181314 None:intergenic 55.0%
!! GCTGGTGGCAATGGTAATGG+TGG - chr8_1:51181421-51181440 None:intergenic 55.0%
!! GGTGCTGGTGATACCTTTGG+TGG - chr8_1:51181451-51181470 None:intergenic 55.0%
!! GCAGGTGCTGGTGATACCTT+TGG - chr8_1:51181454-51181473 None:intergenic 55.0%
GGTATCACCAGCACCTGCAA+AGG + chr8_1:51181456-51181475 Msa1199250:CDS 55.0%
!! GGTACCAAAAGCACCAGCAC+CGG + chr8_1:51181477-51181496 Msa1199250:CDS 55.0%
!! TGCTGGTGCTGGTGCTTCTT+TGG - chr8_1:51181503-51181522 None:intergenic 55.0%
!! TTGTGTGTAGGTGCTGGTGC+TGG - chr8_1:51181514-51181533 None:intergenic 55.0%
!! GGTGCCGGTGTTTCTTTGTC+TGG - chr8_1:51181559-51181578 None:intergenic 55.0%
!! TTGTGTGTTGGTGCTGGTGC+CGG - chr8_1:51181574-51181593 None:intergenic 55.0%
!! GGTGATGGTGGGAGAATTGC+TGG - chr8_1:51181631-51181650 None:intergenic 55.0%
! GTGTTGGTGCAGGTGATGGT+GGG - chr8_1:51181642-51181661 None:intergenic 55.0%
!! GTAGGTGTTGGTGCAGGTGA+TGG - chr8_1:51181646-51181665 None:intergenic 55.0%
!! TCATCTTCAGGTGCTGGTGC+TGG - chr8_1:51181679-51181698 None:intergenic 55.0%
GGTGCATCATCTTCAGGTGC+TGG - chr8_1:51181685-51181704 None:intergenic 55.0%
! ATCAGCTAGTGGTGGTGCTG+GGG - chr8_1:51181830-51181849 None:intergenic 55.0%
! CATCAGCTAGTGGTGGTGCT+GGG - chr8_1:51181831-51181850 None:intergenic 55.0%
! TCATCAGCTAGTGGTGGTGC+TGG - chr8_1:51181832-51181851 None:intergenic 55.0%
!! GGCTGCAGTGTTTTGGGCAT+TGG + chr8_1:51180088-51180107 Msa1199250:CDS 55.0%
! GGGTCCGATGGATTTGTGGT+TGG - chr8_1:51180296-51180315 None:intergenic 55.0%
GCAGGAGTTGCTGCCACAAT+AGG - chr8_1:51180347-51180366 None:intergenic 55.0%
! GGTGCAGATGGATTCGTGGT+TGG - chr8_1:51180593-51180612 None:intergenic 55.0%
! GGAAGGTGCAGATGGATTCG+TGG - chr8_1:51180597-51180616 None:intergenic 55.0%
! GGCAATGTGGAAGGTGCAGA+TGG - chr8_1:51180605-51180624 None:intergenic 55.0%
GAAGTAGGAGAGGTTGCTGC+TGG - chr8_1:51180686-51180705 None:intergenic 55.0%
GGTGCGGCAGGGATTATAGT+TGG - chr8_1:51180755-51180774 None:intergenic 55.0%
GCTGCTGTTGGCAACTTGGA+AGG - chr8_1:51180776-51180795 None:intergenic 55.0%
CGAAGCTGCTGTTGGCAACT+TGG - chr8_1:51180780-51180799 None:intergenic 55.0%
GAAGTTGGCGAAGCTGCTGT+TGG - chr8_1:51180788-51180807 None:intergenic 55.0%
GGGGAAGTTGCTACCACAGT+AGG - chr8_1:51180839-51180858 None:intergenic 55.0%
GACTTCACAGGGGAAGATGC+TGG - chr8_1:51180956-51180975 None:intergenic 55.0%
TGGGGACAGGTGACTTCACA+GGG - chr8_1:51180967-51180986 None:intergenic 55.0%
TTGGGGACAGGTGACTTCAC+AGG - chr8_1:51180968-51180987 None:intergenic 55.0%
GACTTCACGGGAGCAGATGT+TGG - chr8_1:51181001-51181020 None:intergenic 55.0%
GGTTTCACAGGAGAGGCTGT+TGG - chr8_1:51181046-51181065 None:intergenic 55.0%
! GGTTTTGCAGGTGCAACCGT+TGG - chr8_1:51181091-51181110 None:intergenic 55.0%
GGTTGCACCTGCAAAACCAC+TGG + chr8_1:51181093-51181112 Msa1199250:CDS 55.0%
GGTTTCACAGGTGCAGCTGT+TGG - chr8_1:51181136-51181155 None:intergenic 55.0%
AGCTGCACCTGTGAAACCAC+TGG + chr8_1:51181138-51181157 Msa1199250:CDS 55.0%
!! GGTTTTGGTGCGGGAGCTTT+CGG - chr8_1:51181211-51181230 None:intergenic 55.0%
TTGACAGGAGCAGCTGTTGG+AGG - chr8_1:51181268-51181287 None:intergenic 55.0%
!! GCTGGTGTAACCTTTGGGAC+TGG - chr8_1:51181295-51181314 None:intergenic 55.0%
!! GCTGGTGGCAATGGTAATGG+TGG - chr8_1:51181421-51181440 None:intergenic 55.0%
!! GGTGCTGGTGATACCTTTGG+TGG - chr8_1:51181451-51181470 None:intergenic 55.0%
!! GCAGGTGCTGGTGATACCTT+TGG - chr8_1:51181454-51181473 None:intergenic 55.0%
GGTATCACCAGCACCTGCAA+AGG + chr8_1:51181456-51181475 Msa1199250:CDS 55.0%
!! GGTACCAAAAGCACCAGCAC+CGG + chr8_1:51181477-51181496 Msa1199250:CDS 55.0%
!! TGCTGGTGCTGGTGCTTCTT+TGG - chr8_1:51181503-51181522 None:intergenic 55.0%
!! TTGTGTGTAGGTGCTGGTGC+TGG - chr8_1:51181514-51181533 None:intergenic 55.0%
!! GGTGCCGGTGTTTCTTTGTC+TGG - chr8_1:51181559-51181578 None:intergenic 55.0%
!! TTGTGTGTTGGTGCTGGTGC+CGG - chr8_1:51181574-51181593 None:intergenic 55.0%
!! GGTGATGGTGGGAGAATTGC+TGG - chr8_1:51181631-51181650 None:intergenic 55.0%
! GTGTTGGTGCAGGTGATGGT+GGG - chr8_1:51181642-51181661 None:intergenic 55.0%
!! GTAGGTGTTGGTGCAGGTGA+TGG - chr8_1:51181646-51181665 None:intergenic 55.0%
!! TCATCTTCAGGTGCTGGTGC+TGG - chr8_1:51181679-51181698 None:intergenic 55.0%
GGTGCATCATCTTCAGGTGC+TGG - chr8_1:51181685-51181704 None:intergenic 55.0%
! ATCAGCTAGTGGTGGTGCTG+GGG - chr8_1:51181830-51181849 None:intergenic 55.0%
! CATCAGCTAGTGGTGGTGCT+GGG - chr8_1:51181831-51181850 None:intergenic 55.0%
! TCATCAGCTAGTGGTGGTGC+TGG - chr8_1:51181832-51181851 None:intergenic 55.0%
CAAACCCACAGCCACGGTCA+CGG + chr8_1:51180250-51180269 Msa1199250:CDS 60.0%
! GGCAGTGTTGAAGGGTCCGA+TGG - chr8_1:51180308-51180327 None:intergenic 60.0%
GCAGGAGTTGCCGCCACAAT+AGG - chr8_1:51180392-51180411 None:intergenic 60.0%
GCAGGAGTTGCCGCCACAAT+AGG - chr8_1:51180392-51180411 None:intergenic 60.0%
GCAGGAGTTGCCGCCACAAT+AGG - chr8_1:51180392-51180411 None:intergenic 60.0%
TGGTGCAGCTGCCGTAACTG+TGG - chr8_1:51180561-51180580 None:intergenic 60.0%
GTAGGAGAGGTTGCTGCTGG+TGG - chr8_1:51180683-51180702 None:intergenic 60.0%
GCTGCTGAGATCGTGGTCGA+GGG - chr8_1:51180716-51180735 None:intergenic 60.0%
TGCTGCTGAGATCGTGGTCG+AGG - chr8_1:51180717-51180736 None:intergenic 60.0%
!! TGGTGCTGCTGCTGAGATCG+TGG - chr8_1:51180723-51180742 None:intergenic 60.0%
! GCAACTTGGAAGGTGCGGCA+GGG - chr8_1:51180766-51180785 None:intergenic 60.0%
GGGGACAGGTGACTTCACAG+GGG - chr8_1:51180966-51180985 None:intergenic 60.0%
!!! TTGGCCGGTGCTGGTGCTTT+TGG - chr8_1:51181484-51181503 None:intergenic 60.0%
!! GGTGCTGGTGCTTCTTTGGC+CGG - chr8_1:51181499-51181518 None:intergenic 60.0%
TCTTTGTCTGGTGCGGGTGC+TGG - chr8_1:51181547-51181566 None:intergenic 60.0%
GGTGGGAGAATTGCTGGGGA+AGG - chr8_1:51181625-51181644 None:intergenic 60.0%
!! GGTGTTGGTGCAGGTGATGG+TGG - chr8_1:51181643-51181662 None:intergenic 60.0%
! TGCTTGTGGGGTGGTGGTTC+TGG - chr8_1:51181706-51181725 None:intergenic 60.0%
CTCTTGTGCTTGTGGGGTGG+TGG - chr8_1:51181712-51181731 None:intergenic 60.0%
! TCAGCTAGTGGTGGTGCTGG+GGG - chr8_1:51181829-51181848 None:intergenic 60.0%
!! CTAGGACTGGGTGCTGGTGA+TGG - chr8_1:51181883-51181902 None:intergenic 60.0%
ACCAGCACCCAGTCCTAGTG+CGG + chr8_1:51181885-51181904 Msa1199250:CDS 60.0%
CAAACCCACAGCCACGGTCA+CGG + chr8_1:51180250-51180269 Msa1199250:CDS 60.0%
! GGCAGTGTTGAAGGGTCCGA+TGG - chr8_1:51180308-51180327 None:intergenic 60.0%
GCAGGAGTTGCCGCCACAAT+AGG - chr8_1:51180392-51180411 None:intergenic 60.0%
GCAGGAGTTGCCGCCACAAT+AGG - chr8_1:51180392-51180411 None:intergenic 60.0%
GCAGGAGTTGCCGCCACAAT+AGG - chr8_1:51180392-51180411 None:intergenic 60.0%
TGGTGCAGCTGCCGTAACTG+TGG - chr8_1:51180561-51180580 None:intergenic 60.0%
GTAGGAGAGGTTGCTGCTGG+TGG - chr8_1:51180683-51180702 None:intergenic 60.0%
GCTGCTGAGATCGTGGTCGA+GGG - chr8_1:51180716-51180735 None:intergenic 60.0%
TGCTGCTGAGATCGTGGTCG+AGG - chr8_1:51180717-51180736 None:intergenic 60.0%
!! TGGTGCTGCTGCTGAGATCG+TGG - chr8_1:51180723-51180742 None:intergenic 60.0%
! GCAACTTGGAAGGTGCGGCA+GGG - chr8_1:51180766-51180785 None:intergenic 60.0%
GGGGACAGGTGACTTCACAG+GGG - chr8_1:51180966-51180985 None:intergenic 60.0%
!!! TTGGCCGGTGCTGGTGCTTT+TGG - chr8_1:51181484-51181503 None:intergenic 60.0%
!! GGTGCTGGTGCTTCTTTGGC+CGG - chr8_1:51181499-51181518 None:intergenic 60.0%
TCTTTGTCTGGTGCGGGTGC+TGG - chr8_1:51181547-51181566 None:intergenic 60.0%
GGTGGGAGAATTGCTGGGGA+AGG - chr8_1:51181625-51181644 None:intergenic 60.0%
!! GGTGTTGGTGCAGGTGATGG+TGG - chr8_1:51181643-51181662 None:intergenic 60.0%
! TGCTTGTGGGGTGGTGGTTC+TGG - chr8_1:51181706-51181725 None:intergenic 60.0%
CTCTTGTGCTTGTGGGGTGG+TGG - chr8_1:51181712-51181731 None:intergenic 60.0%
! TCAGCTAGTGGTGGTGCTGG+GGG - chr8_1:51181829-51181848 None:intergenic 60.0%
!! CTAGGACTGGGTGCTGGTGA+TGG - chr8_1:51181883-51181902 None:intergenic 60.0%
ACCAGCACCCAGTCCTAGTG+CGG + chr8_1:51181885-51181904 Msa1199250:CDS 60.0%
! GGCAACTTGGAAGGTGCGGC+AGG - chr8_1:51180767-51180786 None:intergenic 65.0%
GCAGGCGGTTGAGTGGTGGT+TGG - chr8_1:51180878-51180897 None:intergenic 65.0%
AGCTGCAGGCGGTTGAGTGG+TGG - chr8_1:51180882-51180901 None:intergenic 65.0%
TGCAGCTGCAGGCGGTTGAG+TGG - chr8_1:51180885-51180904 None:intergenic 65.0%
! GGAGTCGCGACTTTGGGGAC+AGG - chr8_1:51180980-51180999 None:intergenic 65.0%
GCGGGAGCTTTCGGAACTGG+TGG - chr8_1:51181202-51181221 None:intergenic 65.0%
GGTGCGGGAGCTTTCGGAAC+TGG - chr8_1:51181205-51181224 None:intergenic 65.0%
GGTGCTTCTTTGGCCGGTGC+TGG - chr8_1:51181493-51181512 None:intergenic 65.0%
ACCGCACTAGGACTGGGTGC+TGG - chr8_1:51181889-51181908 None:intergenic 65.0%
! GGCAACTTGGAAGGTGCGGC+AGG - chr8_1:51180767-51180786 None:intergenic 65.0%
GCAGGCGGTTGAGTGGTGGT+TGG - chr8_1:51180878-51180897 None:intergenic 65.0%
AGCTGCAGGCGGTTGAGTGG+TGG - chr8_1:51180882-51180901 None:intergenic 65.0%
TGCAGCTGCAGGCGGTTGAG+TGG - chr8_1:51180885-51180904 None:intergenic 65.0%
! GGAGTCGCGACTTTGGGGAC+AGG - chr8_1:51180980-51180999 None:intergenic 65.0%
GCGGGAGCTTTCGGAACTGG+TGG - chr8_1:51181202-51181221 None:intergenic 65.0%
GGTGCGGGAGCTTTCGGAAC+TGG - chr8_1:51181205-51181224 None:intergenic 65.0%
GGTGCTTCTTTGGCCGGTGC+TGG - chr8_1:51181493-51181512 None:intergenic 65.0%
ACCGCACTAGGACTGGGTGC+TGG - chr8_1:51181889-51181908 None:intergenic 65.0%
GCTGCCGTGACCGTGGCTGT+GGG - chr8_1:51180257-51180276 None:intergenic 70.0%
AGCTGCCGTGACCGTGGCTG+TGG - chr8_1:51180258-51180277 None:intergenic 70.0%
TGGTGCAGCTGCCGTGACCG+TGG - chr8_1:51180264-51180283 None:intergenic 70.0%
GCTGCCGTGACCGTGGCTGT+GGG - chr8_1:51180257-51180276 None:intergenic 70.0%
AGCTGCCGTGACCGTGGCTG+TGG - chr8_1:51180258-51180277 None:intergenic 70.0%
TGGTGCAGCTGCCGTGACCG+TGG - chr8_1:51180264-51180283 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 51180086 51182412 51180086 ID=Msa1199250;Name=Msa1199250
chr8_1 mRNA 51180086 51182412 51180086 ID=Msa1199250-mRNA-1;Parent=Msa1199250;Name=Msa1199250-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|1|0.5|1|1|1|2|209|635
chr8_1 exon 51180086 51181906 51180086 ID=Msa1199250-mRNA-1:exon:16180;Parent=Msa1199250-mRNA-1
chr8_1 exon 51182117 51182412 51182117 ID=Msa1199250-mRNA-1:exon:16181;Parent=Msa1199250-mRNA-1
chr8_1 CDS 51180086 51181906 51180086 ID=Msa1199250-mRNA-1:cds;Parent=Msa1199250-mRNA-1
chr8_1 CDS 51182117 51182203 51182117 ID=Msa1199250-mRNA-1:cds;Parent=Msa1199250-mRNA-1
chr8_1 three_prime_UTR 51182204 51182412 51182204 ID=Msa1199250-mRNA-1:three_prime_utr;Parent=Msa1199250-mRNA-1
Gene Sequence

>Msa1199250

ATGGCTGCAGTGTTTTGGGCATTGGCTTTAGCAAGCCTATGCTACCCTCTAGCCTCAATCAATGCTCAATCACAGGCAGCTTCACCTTCCAATTTGCCAAGTACAACTTCACCGTTTGTAGCGAAACAACAACCTGTTGTAGCAGCAACTTCTCCTACTTCTAACAAACCCACAGCCACGGTCACGGCAGCTGCACCATCGAAGTTGCCAACCACAAATCCATCGGACCCTTCAACACTGCCATTATACAAACAACAGCCTATTGTGGCAGCAACTCCTGCTAGTAGTACAAATAAACAACAGCCTATTGTGGCGGCAACTCCTGCCAGTAATACAAACAAACAACAGCCTATTGTGGCGGCAACTCCTGCTAGCAATACAAACAAACAACAGCCTATTGTGGCGGCAACTCCTGCTAGTAATACAAACAAACAACCTGCAGCAACTTCTCCTACTTCTAACAAACCCATAACCACAGTTACGGCAGCTGCACCATCGAAGTTGCCAACCACGAATCCATCTGCACCTTCCACATTGCCACTAGACAAACAAAAGCCTATTGTGGCAGCAACTCCTGTTAGTAGTACAAAACAACCACCAGCAGCAACCTCTCCTACTTCTAACAAACCCTCGACCACGATCTCAGCAGCAGCACCATCCAAATTACCAACTATAATCCCTGCCGCACCTTCCAAGTTGCCAACAGCAGCTTCGCCAACTTCTAGTACACCATCTGCTGCTAAAAAACCACCTACTGTGGTAGCAACTTCCCCCTTGTCTAGCAAACAACCAACCACCACTCAACCGCCTGCAGCTGCAAAATCATCTCCAAGCCCTGTAAAATCACCAGTTCCTAAAGTTACGTCTCCAGCATCTTCCCCTGTGAAGTCACCTGTCCCCAAAGTCGCGACTCCAACATCTGCTCCCGTGAAGTCACCAGTTCCAAAAGCTACGACTCCAACAGCCTCTCCTGTGAAACCACCAGTTCCAAAAGTTGCAACTCCAACGGTTGCACCTGCAAAACCACTGGTTCCTAAAGTTACAACTCCAACAGCTGCACCTGTGAAACCACTGGTTCCAAAAGCTACAACTCCAACATCTGCGCCTTTGAAACCACCAGTTCCGAAAGCTCCCGCACCAAAACCTTCTCCTGTGAAACCACCAGTTCCAAAATCAAAACCTCCAACAGCTGCTCCTGTCAAATCACCAGTCCCAAAGGTTACACCAGCATTAAGCCCAAAATCCCCATCCCCTAAAATTCAACCACCACCACATCCACCCAAAAAAGCACCTGTTTCTTTACCACCATTATCTATACCGCCTGTTTCACTTCCACCATTACCATTGCCACCAGCTTCTAAACCACCAAAGGTATCACCAGCACCTGCAAAGGTACCAAAAGCACCAGCACCGGCCAAAGAAGCACCAGCACCAGCACCTACACACAAAAAGAAAGCACCAGCACCCGCACCAGACAAAGAAACACCGGCACCAGCACCAACACACAAAAAGAAAAAACCAAAATCATCACCAGTTCCTTCCCCAGCAATTCTCCCACCATCACCTGCACCAACACCTACAATAGACACACCAGCACCAGCACCTGAAGATGATGCACCAGAACCACCACCCCACAAGCACAAGAGAAAAAAACACAAGCATAGTAAGCATAAGAAACATCACGCACTAGCTCTAGCACCAGAACCTACAAGTTCAAGTTCAACAATCATTAGAAGGAGTCCCCCAGCACCACCACTAGCTGATGATAATACTACAGTGAGTTCAGATGAGGGACCATCACCAGCACCCAGTCCTAGTGCGAATGGTGCACAATCTTACCATGTGCAATGGAGAAAGATGTTGTCAACCGGTGTACTTGCTATTGCCATTTTGTTATGTGTAACTTGA
Protein sequence

>Msa1199250

MAAVFWALALASLCYPLASINAQSQAASPSNLPSTTSPFVAKQQPVVAATSPTSNKPTATVTAAAPSKLPTTNPSDPSTLPLYKQQPIVAATPASSTNKQQPIVAATPASNTNKQQPIVAATPASNTNKQQPIVAATPASNTNKQPAATSPTSNKPITTVTAAAPSKLPTTNPSAPSTLPLDKQKPIVAATPVSSTKQPPAATSPTSNKPSTTISAAAPSKLPTIIPAAPSKLPTAASPTSSTPSAAKKPPTVVATSPLSSKQPTTTQPPAAAKSSPSPVKSPVPKVTSPASSPVKSPVPKVATPTSAPVKSPVPKATTPTASPVKPPVPKVATPTVAPAKPLVPKVTTPTAAPVKPLVPKATTPTSAPLKPPVPKAPAPKPSPVKPPVPKSKPPTAAPVKSPVPKVTPALSPKSPSPKIQPPPHPPKKAPVSLPPLSIPPVSLPPLPLPPASKPPKVSPAPAKVPKAPAPAKEAPAPAPTHKKKAPAPAPDKETPAPAPTHKKKKPKSSPVPSPAILPPSPAPTPTIDTPAPAPEDDAPEPPPHKHKRKKHKHSKHKKHHALALAPEPTSSSSTIIRRSPPAPPLADDNTTVSSDEGPSPAPSPSANGAQSYHVQWRKMLSTGVLAIAILLCVT*