Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1421310 | sp|Q9LFW3|COBL4_ARATH | 73.183 | 399 | 103 | 2 | 33 | 431 | 18 | 412 | 0.0 | 647 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1421310 | A0A072V9S0 | 98.182 | 440 | 8 | 0 | 14 | 453 | 3 | 442 | 0.0 | 909 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0618050 | Msa1421310 | 0.861465 | 1.006723e-63 | -8.615850e-47 |
| Msa0618600 | Msa1421310 | 0.871432 | 6.867116e-67 | -8.615850e-47 |
| Msa0643240 | Msa1421310 | 0.833034 | 6.724493e-56 | -8.615850e-47 |
| Msa0657380 | Msa1421310 | 0.846213 | 2.500861e-59 | -8.615850e-47 |
| Msa0682920 | Msa1421310 | 0.827848 | 1.247264e-54 | -8.615850e-47 |
| Msa0708510 | Msa1421310 | 0.895824 | 6.639569e-76 | -8.615850e-47 |
| Msa0792190 | Msa1421310 | 0.806327 | 8.680977e-50 | -8.615850e-47 |
| Msa0142380 | Msa1421310 | 0.801662 | 8.101334e-49 | -8.615850e-47 |
| Msa1252480 | Msa1421310 | 0.831679 | 1.455906e-55 | -8.615850e-47 |
| Msa1267350 | Msa1421310 | 0.803335 | 3.661341e-49 | -8.615850e-47 |
| Msa1290460 | Msa1421310 | 0.805696 | 1.178332e-49 | -8.615850e-47 |
| Msa1293220 | Msa1421310 | 0.827270 | 1.716160e-54 | -8.615850e-47 |
| Msa1035290 | Msa1421310 | 0.840357 | 9.130387e-58 | -8.615850e-47 |
| Msa1075380 | Msa1421310 | 0.866822 | 2.152807e-65 | -8.615850e-47 |
| Msa0250450 | Msa1421310 | 0.947645 | 4.497101e-106 | -8.615850e-47 |
| Msa0263440 | Msa1421310 | 0.879567 | 1.121843e-69 | -8.615850e-47 |
| Msa0269380 | Msa1421310 | 0.804315 | 2.291455e-49 | -8.615850e-47 |
| Msa0289060 | Msa1421310 | 0.937426 | 3.531473e-98 | -8.615850e-47 |
| Msa0289100 | Msa1421310 | 0.940460 | 2.246582e-100 | -8.615850e-47 |
| Msa0301030 | Msa1421310 | 0.898532 | 4.839113e-77 | -8.615850e-47 |
| Msa0314220 | Msa1421310 | 0.830700 | 2.533671e-55 | -8.615850e-47 |
| Msa0327020 | Msa1421310 | 0.953062 | 6.254683e-111 | -8.615850e-47 |
| Msa0338580 | Msa1421310 | 0.843357 | 1.472693e-58 | -8.615850e-47 |
| Msa1116460 | Msa1421310 | 0.864175 | 1.468618e-64 | -8.615850e-47 |
| Msa1162860 | Msa1421310 | 0.846406 | 2.216747e-59 | -8.615850e-47 |
| Msa1199250 | Msa1421310 | 0.853228 | 2.745930e-61 | -8.615850e-47 |
| Msa0485970 | Msa1421310 | 0.871205 | 8.162661e-67 | -8.615850e-47 |
| Msa0547390 | Msa1421310 | 0.851351 | 9.392875e-61 | -8.615850e-47 |
| Msa0564950 | Msa1421310 | 0.840780 | 7.074474e-58 | -8.615850e-47 |
| Msa0565260 | Msa1421310 | 0.837605 | 4.711163e-57 | -8.615850e-47 |
| Msa0580580 | Msa1421310 | 0.858898 | 6.004958e-63 | -8.615850e-47 |
| Msa0602110 | Msa1421310 | 0.837606 | 4.705898e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1421310 | MtrunA17_Chr2g0308371 | 98.182 | 440 | 8 | 0 | 14 | 453 | 3 | 442 | 0.0 | 909 |
| Msa1421310 | MtrunA17_Chr6g0455411 | 69.324 | 414 | 123 | 1 | 17 | 430 | 1 | 410 | 0.0 | 642 |
| Msa1421310 | MtrunA17_Chr7g0219931 | 65.967 | 429 | 139 | 2 | 17 | 445 | 1 | 422 | 0.0 | 634 |
| Msa1421310 | MtrunA17_Chr2g0308381 | 60.321 | 436 | 165 | 3 | 19 | 451 | 18 | 448 | 0.0 | 586 |
| Msa1421310 | MtrunA17_Chr7g0219921 | 59.908 | 434 | 163 | 4 | 25 | 452 | 17 | 445 | 0.0 | 574 |
| Msa1421310 | MtrunA17_Chr6g0455401 | 57.650 | 451 | 175 | 5 | 1 | 447 | 1 | 439 | 0.0 | 561 |
| Msa1421310 | MtrunA17_Chr6g0455391 | 58.105 | 401 | 153 | 4 | 33 | 429 | 25 | 414 | 6.60e-180 | 509 |
| Msa1421310 | MtrunA17_Chr2g0333731 | 50.714 | 420 | 196 | 4 | 34 | 446 | 27 | 442 | 4.45e-173 | 493 |
| Msa1421310 | MtrunA17_Chr3g0145441 | 40.233 | 430 | 239 | 9 | 27 | 444 | 32 | 455 | 4.11e-118 | 353 |
| Msa1421310 | MtrunA17_Chr2g0294901 | 28.875 | 471 | 274 | 22 | 30 | 453 | 197 | 653 | 2.63e-35 | 138 |
| Msa1421310 | MtrunA17_Chr4g0068011 | 28.416 | 461 | 269 | 21 | 4 | 418 | 173 | 618 | 1.08e-34 | 137 |
| Msa1421310 | MtrunA17_Chr5g0394101 | 28.266 | 421 | 245 | 18 | 43 | 418 | 26 | 434 | 9.91e-34 | 132 |
| Msa1421310 | MtrunA17_Chr2g0319581 | 27.273 | 418 | 253 | 18 | 43 | 419 | 226 | 633 | 1.48e-29 | 122 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1421310 | AT5G15630.1 | 73.183 | 399 | 103 | 2 | 33 | 431 | 18 | 412 | 0.0 | 647 |
| Msa1421310 | AT5G15630.3 | 73.158 | 380 | 98 | 2 | 52 | 431 | 1 | 376 | 0.0 | 613 |
| Msa1421310 | AT5G15630.4 | 73.151 | 365 | 94 | 2 | 67 | 431 | 3 | 363 | 0.0 | 590 |
| Msa1421310 | AT5G15630.2 | 73.151 | 365 | 94 | 2 | 67 | 431 | 3 | 363 | 0.0 | 590 |
| Msa1421310 | AT5G60920.1 | 61.072 | 429 | 155 | 4 | 20 | 438 | 15 | 441 | 0.0 | 587 |
| Msa1421310 | AT3G02210.1 | 58.391 | 435 | 170 | 4 | 19 | 450 | 22 | 448 | 0.0 | 566 |
| Msa1421310 | AT5G60920.2 | 63.131 | 396 | 140 | 3 | 47 | 438 | 1 | 394 | 0.0 | 563 |
| Msa1421310 | AT3G29810.1 | 59.330 | 418 | 158 | 4 | 34 | 446 | 27 | 437 | 0.0 | 555 |
| Msa1421310 | AT5G15630.5 | 70.031 | 327 | 94 | 2 | 33 | 359 | 18 | 340 | 0.0 | 509 |
| Msa1421310 | AT1G09790.2 | 48.792 | 414 | 201 | 6 | 17 | 427 | 7 | 412 | 9.11e-142 | 413 |
| Msa1421310 | AT1G09790.1 | 47.765 | 425 | 200 | 7 | 17 | 427 | 7 | 423 | 3.96e-139 | 407 |
| Msa1421310 | AT5G60950.1 | 49.171 | 181 | 84 | 2 | 43 | 223 | 30 | 202 | 9.65e-58 | 189 |
| Msa1421310 | AT4G16120.1 | 28.673 | 422 | 247 | 19 | 43 | 418 | 217 | 630 | 2.32e-39 | 150 |
| Msa1421310 | AT5G49270.1 | 28.438 | 429 | 254 | 19 | 36 | 418 | 210 | 631 | 2.70e-38 | 147 |
| Msa1421310 | AT4G27110.1 | 27.253 | 455 | 277 | 18 | 43 | 451 | 219 | 665 | 1.64e-33 | 134 |
| Msa1421310 | AT3G16860.1 | 27.948 | 458 | 265 | 24 | 43 | 451 | 210 | 651 | 1.65e-32 | 130 |
| Msa1421310 | AT3G20580.1 | 28.289 | 456 | 261 | 21 | 43 | 449 | 229 | 667 | 3.70e-32 | 130 |
Find 116 sgRNAs with CRISPR-Local
Find 204 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCCCATATGATTTCTTTCT+TGG | 0.151399 | tig0024927:-44709 | None:intergenic |
| TCAACTTCAGGCATGGAATT+TGG | 0.180595 | tig0024927:+43759 | Msa1421310:exon |
| CCTAGAAGGGTATACTTTAA+TGG | 0.184050 | tig0024927:+46815 | Msa1421310:CDS |
| TATTTCCAGCAACCTCTTTC+AGG | 0.198489 | tig0024927:-45998 | None:intergenic |
| AAGATAATTATAAGGATTAT+TGG | 0.226624 | tig0024927:+46108 | Msa1421310:CDS |
| AACACAACAGCTTGGGTTCT+TGG | 0.235897 | tig0024927:-45516 | None:intergenic |
| GGTAGCCTTTGAGCAGAATT+TGG | 0.247873 | tig0024927:-46881 | None:intergenic |
| ATAACAATTTGGTGATTTCT+TGG | 0.256668 | tig0024927:+43732 | None:intergenic |
| CCATTAAAGTATACCCTTCT+AGG | 0.259971 | tig0024927:-46815 | None:intergenic |
| AACTGTCTTGTTAGTCCTTC+CGG | 0.267626 | tig0024927:-44946 | None:intergenic |
| TGGCGTGTGCATTGCAATAA+AGG | 0.319433 | tig0024927:-46053 | None:intergenic |
| ATTCTACAATGATTTAATAA+TGG | 0.323384 | tig0024927:+46706 | Msa1421310:CDS |
| GCATATAAAAGATAATTATA+AGG | 0.335357 | tig0024927:+46100 | Msa1421310:CDS |
| TTTCTTGGAACTTCAACTTC+AGG | 0.356954 | tig0024927:+43747 | Msa1421310:five_prime_UTR |
| GTGCATTGCAATAAAGGTTT+TGG | 0.357973 | tig0024927:-46047 | None:intergenic |
| GGGTAACATTACTGAGATTA+GGG | 0.358595 | tig0024927:-46202 | None:intergenic |
| TAATGGAAGCTGGGGCTAAA+GGG | 0.368160 | tig0024927:+46723 | Msa1421310:CDS |
| CAAGTTGTTGACTTATTACC+TGG | 0.372283 | tig0024927:+44813 | Msa1421310:CDS |
| GATGACACAGGAATGTTCTA+TGG | 0.385600 | tig0024927:+46677 | Msa1421310:intron |
| TGTTGCTTGCGCTCCCATCA+TGG | 0.386890 | tig0024927:-44730 | None:intergenic |
| ATGGACATCAGATGGTTATA+TGG | 0.392606 | tig0024927:+44040 | Msa1421310:CDS |
| ATGAACCCGGGATGGACATT+AGG | 0.394711 | tig0024927:+44675 | Msa1421310:CDS |
| ATCCCGGGTTCATAATGTTT+CGG | 0.395348 | tig0024927:-44665 | None:intergenic |
| AGGTGGTGTGCTAACATCTT+GGG | 0.396771 | tig0024927:+44872 | Msa1421310:CDS |
| TGGGTAACATTACTGAGATT+AGG | 0.404033 | tig0024927:-46203 | None:intergenic |
| TTTGATCCATTGGATCCAAC+TGG | 0.408485 | tig0024927:+43987 | Msa1421310:CDS |
| GGGCCAAGAAAGAAATCATA+TGG | 0.421488 | tig0024927:+44706 | Msa1421310:CDS |
| TGAGCAGAATTTGGCAAGAA+AGG | 0.426117 | tig0024927:-46872 | None:intergenic |
| TAGAATGAATTACACACAAT+GGG | 0.426364 | tig0024927:+46163 | Msa1421310:CDS |
| ATATGCCAATGCACACGAAC+AGG | 0.426620 | tig0024927:-46083 | None:intergenic |
| ATAATGGAAGCTGGGGCTAA+AGG | 0.427586 | tig0024927:+46722 | Msa1421310:CDS |
| TCTTGGGGACAGGACCCTTC+AGG | 0.429022 | tig0024927:+44888 | Msa1421310:CDS |
| AACTTACTTATGGCTTCATA+AGG | 0.429069 | tig0024927:-46257 | None:intergenic |
| GGCAAGAAAGGGTATGAATC+AGG | 0.435645 | tig0024927:-46860 | None:intergenic |
| TGTAGAGGCATTTGATCCAT+TGG | 0.442199 | tig0024927:+43977 | Msa1421310:intron |
| AATGATTTAATAATGGAAGC+TGG | 0.446216 | tig0024927:+46713 | Msa1421310:CDS |
| TCTGTAAGAATAACAGTTGA+AGG | 0.452263 | tig0024927:-45038 | None:intergenic |
| AAGATCCTGAAAGAGGTTGC+TGG | 0.460769 | tig0024927:+45993 | Msa1421310:CDS |
| AAATTGCTTGGACCGGGAGC+AGG | 0.463331 | tig0024927:+44987 | Msa1421310:CDS |
| GAGCAGAATTTGGCAAGAAA+GGG | 0.471958 | tig0024927:-46871 | None:intergenic |
| AGAAATCATATGGGCCATGA+TGG | 0.480849 | tig0024927:+44716 | Msa1421310:CDS |
| ATGATTTAATAATGGAAGCT+GGG | 0.480905 | tig0024927:+46714 | Msa1421310:CDS |
| ATAAAGAAACACAACAGCTT+GGG | 0.481011 | tig0024927:-45523 | None:intergenic |
| GTCCATCCTAATGTCCATCC+CGG | 0.482281 | tig0024927:-44681 | None:intergenic |
| TTTGTCCTGTTCGTGTGCAT+TGG | 0.488987 | tig0024927:+46078 | Msa1421310:CDS |
| TGCAATCTCGGCATTTCAGA+TGG | 0.490026 | tig0024927:+44911 | Msa1421310:CDS |
| GGACTTCTCTTGCAACTATG+AGG | 0.491344 | tig0024927:-44789 | None:intergenic |
| TCAGGCATGGAATTTGGTAA+TGG | 0.494974 | tig0024927:+43765 | Msa1421310:exon |
| ATAAGTACATGTCACATTCC+AGG | 0.497470 | tig0024927:-45477 | None:intergenic |
| GATAAAGAAACACAACAGCT+TGG | 0.498328 | tig0024927:-45524 | None:intergenic |
| AGCAGGATATTCATGTGGTC+CGG | 0.500729 | tig0024927:+45004 | Msa1421310:CDS |
| ACATTCCCAGTTGGATCCAA+TGG | 0.502942 | tig0024927:-43993 | None:intergenic |
| CTGGGAATGTGACAATAAGA+TGG | 0.503167 | tig0024927:+44006 | Msa1421310:CDS |
| GGACCCTTCAGGTGCAATCT+CGG | 0.506260 | tig0024927:+44899 | Msa1421310:CDS |
| TGGAACTTCAACTTCAGGCA+TGG | 0.508911 | tig0024927:+43752 | Msa1421310:exon |
| CAAGACAGTTAAACTACCTC+AGG | 0.509450 | tig0024927:+44959 | Msa1421310:CDS |
| CAGATGGGTGTAGGACTCTC+CGG | 0.515620 | tig0024927:+44927 | Msa1421310:CDS |
| ATCTGAGGTGCTTATGAAGA+AGG | 0.516290 | tig0024927:+46754 | Msa1421310:CDS |
| AAGGTGGTGTGCTAACATCT+TGG | 0.517435 | tig0024927:+44871 | Msa1421310:CDS |
| GTCATCATTACAACACTTGT+AGG | 0.519462 | tig0024927:-46902 | None:intergenic |
| CATTTACACTAAAGCAAGGA+TGG | 0.523081 | tig0024927:+46786 | Msa1421310:CDS |
| ACAACAGCTTGGGTTCTTGG+AGG | 0.528958 | tig0024927:-45513 | None:intergenic |
| CTTATTGTCACATTCCCAGT+TGG | 0.532085 | tig0024927:-44002 | None:intergenic |
| TGTATTCAAAACTATAGACT+TGG | 0.537143 | tig0024927:-46223 | None:intergenic |
| GCTTGTCCAACTTGTGCTTG+TGG | 0.548007 | tig0024927:+45572 | Msa1421310:CDS |
| CTCATTCTTATATCTCCAGC+TGG | 0.550563 | tig0024927:+43849 | Msa1421310:CDS |
| TCTTGCCAAATTCTGCTCAA+AGG | 0.554568 | tig0024927:+46876 | Msa1421310:CDS |
| GGTAATAAGTCAACAACTTG+AGG | 0.555852 | tig0024927:-44810 | None:intergenic |
| TACATTTAGAGAGCTGAAGT+TGG | 0.560296 | tig0024927:+43806 | Msa1421310:CDS |
| AAATGATGCAATAATCACAT+AGG | 0.564180 | tig0024927:-46927 | None:intergenic |
| TGCATATTGTAAGATGCTCC+AGG | 0.567353 | tig0024927:-44831 | None:intergenic |
| GAAATCATATGGGCCATGAT+GGG | 0.570678 | tig0024927:+44717 | Msa1421310:CDS |
| TGTGCTAACATCTTGGGGAC+AGG | 0.571959 | tig0024927:+44878 | Msa1421310:CDS |
| TACACAAACTGTTGCAAAGG+TGG | 0.573020 | tig0024927:+44855 | Msa1421310:CDS |
| ATGCCGAGATTGCACCTGAA+GGG | 0.577152 | tig0024927:-44902 | None:intergenic |
| TTGCTGGAAATAACAAGACT+AGG | 0.578763 | tig0024927:+46009 | Msa1421310:CDS |
| CCACATGAATATCCTGCTCC+CGG | 0.579683 | tig0024927:-44999 | None:intergenic |
| GTTGAAGGAACTCTCTTAGC+CGG | 0.580085 | tig0024927:-45023 | None:intergenic |
| GGAGCGCAAGCAACAGAACA+AGG | 0.580360 | tig0024927:+44738 | Msa1421310:CDS |
| CAATACACAAACTGTTGCAA+AGG | 0.581528 | tig0024927:+44852 | Msa1421310:CDS |
| TCGGCATTTCAGATGGGTGT+AGG | 0.583929 | tig0024927:+44918 | Msa1421310:CDS |
| TGATTTAATAATGGAAGCTG+GGG | 0.584574 | tig0024927:+46715 | Msa1421310:CDS |
| TGACAACCACAAGCACAAGT+TGG | 0.585659 | tig0024927:-45578 | None:intergenic |
| TGGGAATGTGACAATAAGAT+GGG | 0.590389 | tig0024927:+44007 | Msa1421310:CDS |
| ATGGCTTCATAAGGAAGAAG+TGG | 0.591100 | tig0024927:-46248 | None:intergenic |
| TCCATCCTAATGTCCATCCC+GGG | 0.595187 | tig0024927:-44680 | None:intergenic |
| AGATTCAAAGATCCTGAAAG+AGG | 0.596172 | tig0024927:+45986 | Msa1421310:CDS |
| AAGTTGGACAAGCTGTGACT+TGG | 0.597255 | tig0024927:-45562 | None:intergenic |
| AATGCCGAGATTGCACCTGA+AGG | 0.597959 | tig0024927:-44903 | None:intergenic |
| AAAGGGTATGAATCAGGAGG+TGG | 0.602047 | tig0024927:-46854 | None:intergenic |
| GGCCAAGAAAGAAATCATAT+GGG | 0.602816 | tig0024927:+44707 | Msa1421310:CDS |
| ATTATGTCATGGACATCAGA+TGG | 0.603721 | tig0024927:+44032 | Msa1421310:CDS |
| GATGGACATTAGGATGGACA+TGG | 0.605342 | tig0024927:+44685 | Msa1421310:CDS |
| GTATTCAAAACTATAGACTT+GGG | 0.605359 | tig0024927:-46222 | None:intergenic |
| AACACATTTACACTAAAGCA+AGG | 0.605862 | tig0024927:+46782 | Msa1421310:CDS |
| ATACCGAAACATTATGAACC+CGG | 0.606089 | tig0024927:+44662 | Msa1421310:CDS |
| GCAATCTCGGCATTTCAGAT+GGG | 0.606491 | tig0024927:+44912 | Msa1421310:CDS |
| ACCCGGGATGGACATTAGGA+TGG | 0.607366 | tig0024927:+44679 | Msa1421310:CDS |
| TACCGAAACATTATGAACCC+GGG | 0.608883 | tig0024927:+44663 | Msa1421310:CDS |
| ATTTACACTAAAGCAAGGAT+GGG | 0.609581 | tig0024927:+46787 | Msa1421310:CDS |
| TTATTCTTACAGATGATCGT+AGG | 0.609804 | tig0024927:+45048 | Msa1421310:CDS |
| TTGATCCATTGGATCCAACT+GGG | 0.610985 | tig0024927:+43988 | Msa1421310:CDS |
| GAAACATTATGAACCCGGGA+TGG | 0.613102 | tig0024927:+44667 | Msa1421310:CDS |
| TAAGATGGGATATTATGTCA+TGG | 0.615769 | tig0024927:+44021 | Msa1421310:CDS |
| GGTGGTGTGCTAACATCTTG+GGG | 0.624710 | tig0024927:+44873 | Msa1421310:CDS |
| ATAGAATGAATTACACACAA+TGG | 0.628977 | tig0024927:+46162 | Msa1421310:CDS |
| TAAAGGGAATGTGCAATCTG+AGG | 0.631122 | tig0024927:+46739 | Msa1421310:CDS |
| CCAAGCAATTTAAAATCCTG+AGG | 0.636131 | tig0024927:-44975 | None:intergenic |
| TGGGTGTAGGACTCTCCGGA+AGG | 0.662739 | tig0024927:+44931 | Msa1421310:CDS |
| AATGCACACGAACAGGACAA+AGG | 0.669891 | tig0024927:-46076 | None:intergenic |
| CCGGGAGCAGGATATTCATG+TGG | 0.685860 | tig0024927:+44999 | Msa1421310:CDS |
| GCACACGAACAGGACAAAGG+TGG | 0.685930 | tig0024927:-46073 | None:intergenic |
| AAGAAAGGGTATGAATCAGG+AGG | 0.687329 | tig0024927:-46857 | None:intergenic |
| ATGGACATTAGGATGGACAT+GGG | 0.698791 | tig0024927:+44686 | Msa1421310:CDS |
| AGAATGAATTACACACAATG+GGG | 0.725776 | tig0024927:+46164 | Msa1421310:CDS |
| ATTGTGTATGCAGATGACAC+AGG | 0.753079 | tig0024927:+46665 | Msa1421310:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTGATAATTTTATTCTTT+TGG | - | tig0024927:44196-44215 | None:intergenic | 10.0% |
| !! | AAATAATGTTATAACTTATA+AGG | - | tig0024927:45919-45938 | None:intergenic | 10.0% |
| !! | TTATAAGTTATAACATTATT+TGG | + | tig0024927:45918-45937 | Msa1421310:intron | 10.0% |
| !! | GCATATAAAAGATAATTATA+AGG | + | tig0024927:46100-46119 | Msa1421310:CDS | 15.0% |
| !! | AAGATAATTATAAGGATTAT+TGG | + | tig0024927:46108-46127 | Msa1421310:CDS | 15.0% |
| !! | ATTCTACAATGATTTAATAA+TGG | + | tig0024927:46706-46725 | Msa1421310:CDS | 15.0% |
| !! | TTGCATATATGAAAAAACAT+AGG | + | tig0024927:43881-43900 | Msa1421310:intron | 20.0% |
| !!! | ATTTTATTTTATGCTTGTAG+AGG | + | tig0024927:43962-43981 | Msa1421310:intron | 20.0% |
| !! | TTAATATTCGCATAATAACA+CGG | + | tig0024927:44374-44393 | Msa1421310:intron | 20.0% |
| !!! | CGAAAAACATATTTTCAAAA+TGG | + | tig0024927:44460-44479 | Msa1421310:intron | 20.0% |
| !! | TATTAGATAATACTATTTCC+AGG | - | tig0024927:45339-45358 | None:intergenic | 20.0% |
| !! | TAATAGTACATTTGTATTCA+AGG | - | tig0024927:45417-45436 | None:intergenic | 20.0% |
| !!! | AAGACTAATAATCATGATTT+TGG | - | tig0024927:45809-45828 | None:intergenic | 20.0% |
| !! | ATATTTGAAGAACTTACTTA+TGG | - | tig0024927:46270-46289 | None:intergenic | 20.0% |
| !! | TCAAGTAAACAAAATATAGA+CGG | - | tig0024927:46299-46318 | None:intergenic | 20.0% |
| !!! | AAATAAATTGGCTTGAAATT+TGG | - | tig0024927:46464-46483 | None:intergenic | 20.0% |
| !! | ATAGGGATATTATATGTATT+TGG | - | tig0024927:46591-46610 | None:intergenic | 20.0% |
| !!! | TTATTGCATCATTTTTCATT+TGG | + | tig0024927:46936-46955 | Msa1421310:CDS | 20.0% |
| !!! | CATCATTTTTGGAAACATTT+TGG | - | tig0024927:44150-44169 | None:intergenic | 25.0% |
| ! | CTAGAAAAGGATTTGAATAA+TGG | + | tig0024927:44284-44303 | Msa1421310:intron | 25.0% |
| !! | TATATGTGTGTTACTATATC+AGG | - | tig0024927:44326-44345 | None:intergenic | 25.0% |
| ! | AGTAACTGAGATTCATTTAA+AGG | - | tig0024927:44491-44510 | None:intergenic | 25.0% |
| !! | GATACTATGATGTCAAATTT+TGG | + | tig0024927:44607-44626 | Msa1421310:intron | 25.0% |
| ! | CTATTTGCAATATACTCAAA+GGG | - | tig0024927:45108-45127 | None:intergenic | 25.0% |
| ! | ACTATTTGCAATATACTCAA+AGG | - | tig0024927:45109-45128 | None:intergenic | 25.0% |
| ! | GAGTATATTGCAAATAGTTA+TGG | + | tig0024927:45111-45130 | Msa1421310:intron | 25.0% |
| ! | TAATGTGGAAGTAGAAATTA+AGG | - | tig0024927:45633-45652 | None:intergenic | 25.0% |
| ! | TTAAAAGTTGGCTAATAATG+TGG | - | tig0024927:45648-45667 | None:intergenic | 25.0% |
| ! | GTTGCATCATAATCATTTAT+AGG | + | tig0024927:45680-45699 | Msa1421310:intron | 25.0% |
| ! | GAAATTCAGTCAAATACAAT+TGG | + | tig0024927:45707-45726 | Msa1421310:intron | 25.0% |
| !! | AATAATCATGATTTTGGACA+CGG | - | tig0024927:45803-45822 | None:intergenic | 25.0% |
| !!! | GATTATTAGTCTTAACCATA+TGG | + | tig0024927:45816-45835 | Msa1421310:intron | 25.0% |
| !!! | CACAATATAAAAGGTTTTAG+AGG | - | tig0024927:45863-45882 | None:intergenic | 25.0% |
| !!! | CTCTAAAACCTTTTATATTG+TGG | + | tig0024927:45861-45880 | Msa1421310:intron | 25.0% |
| ! | ATAGAATGAATTACACACAA+TGG | + | tig0024927:46162-46181 | Msa1421310:CDS | 25.0% |
| ! | TAGAATGAATTACACACAAT+GGG | + | tig0024927:46163-46182 | Msa1421310:CDS | 25.0% |
| ! | GTATTCAAAACTATAGACTT+GGG | - | tig0024927:46225-46244 | None:intergenic | 25.0% |
| ! | TGTATTCAAAACTATAGACT+TGG | - | tig0024927:46226-46245 | None:intergenic | 25.0% |
| ! | TTGGATTGTACGATATTAAT+CGG | - | tig0024927:46445-46464 | None:intergenic | 25.0% |
| !!! | GTTTTTTTAACTTTTGTGCA+TGG | + | tig0024927:46638-46657 | Msa1421310:intron | 25.0% |
| !! | AATGATTTAATAATGGAAGC+TGG | + | tig0024927:46713-46732 | Msa1421310:CDS | 25.0% |
| !! | ATGATTTAATAATGGAAGCT+GGG | + | tig0024927:46714-46733 | Msa1421310:CDS | 25.0% |
| ! | AAATGATGCAATAATCACAT+AGG | - | tig0024927:46930-46949 | None:intergenic | 25.0% |
| TAAGATGGGATATTATGTCA+TGG | + | tig0024927:44021-44040 | Msa1421310:CDS | 30.0% | |
| ! | CTGATCATGCTATTCTTTTA+AGG | + | tig0024927:44084-44103 | Msa1421310:intron | 30.0% |
| TCCAAAAATGATGAAATCAC+TGG | + | tig0024927:44157-44176 | Msa1421310:intron | 30.0% | |
| ! | ACCAGTGATTTCATCATTTT+TGG | - | tig0024927:44161-44180 | None:intergenic | 30.0% |
| GAAAAGGATTTGAATAATGG+TGG | + | tig0024927:44287-44306 | Msa1421310:intron | 30.0% | |
| TCTGTAAGAATAACAGTTGA+AGG | - | tig0024927:45041-45060 | None:intergenic | 30.0% | |
| TTATTCTTACAGATGATCGT+AGG | + | tig0024927:45048-45067 | Msa1421310:CDS | 30.0% | |
| TTTAATACTGCCGAGAATTA+TGG | + | tig0024927:45173-45192 | Msa1421310:intron | 30.0% | |
| CTACATTTGACCATAATTCT+CGG | - | tig0024927:45186-45205 | None:intergenic | 30.0% | |
| ACTGCATAGGAAAAAAATAC+AGG | - | tig0024927:45455-45474 | None:intergenic | 30.0% | |
| ATAAAGAAACACAACAGCTT+GGG | - | tig0024927:45526-45545 | None:intergenic | 30.0% | |
| ATTTGTCATTATGCAAATGC+AGG | + | tig0024927:45961-45980 | Msa1421310:intron | 30.0% | |
| AGAATGAATTACACACAATG+GGG | + | tig0024927:46164-46183 | Msa1421310:CDS | 30.0% | |
| AACTTACTTATGGCTTCATA+AGG | - | tig0024927:46260-46279 | None:intergenic | 30.0% | |
| AAAATACCAAGCTTGAAATC+TGG | + | tig0024927:46497-46516 | Msa1421310:intron | 30.0% | |
| ! | GTTGTCTTATTAAGATCAGA+CGG | - | tig0024927:46524-46543 | None:intergenic | 30.0% |
| ATGTATTTGGATTGCATATG+TGG | - | tig0024927:46578-46597 | None:intergenic | 30.0% | |
| ATGTGACTCTATGCATTATA+GGG | - | tig0024927:46608-46627 | None:intergenic | 30.0% | |
| ! | TGATTTAATAATGGAAGCTG+GGG | + | tig0024927:46715-46734 | Msa1421310:CDS | 30.0% |
| AACACATTTACACTAAAGCA+AGG | + | tig0024927:46782-46801 | Msa1421310:CDS | 30.0% | |
| ATTTACACTAAAGCAAGGAT+GGG | + | tig0024927:46787-46806 | Msa1421310:CDS | 30.0% | |
| TTTCTTGGAACTTCAACTTC+AGG | + | tig0024927:43747-43766 | Msa1421310:five_prime_UTR | 35.0% | |
| TACATTTAGAGAGCTGAAGT+TGG | + | tig0024927:43806-43825 | Msa1421310:CDS | 35.0% | |
| ATGCAAAGTAATTTACCAGC+TGG | - | tig0024927:43867-43886 | None:intergenic | 35.0% | |
| TGGGAATGTGACAATAAGAT+GGG | + | tig0024927:44007-44026 | Msa1421310:CDS | 35.0% | |
| ATTATGTCATGGACATCAGA+TGG | + | tig0024927:44032-44051 | Msa1421310:CDS | 35.0% | |
| ATGGACATCAGATGGTTATA+TGG | + | tig0024927:44040-44059 | Msa1421310:CDS | 35.0% | |
| TAGCATGATCAGACAAAGTT+TGG | - | tig0024927:44076-44095 | None:intergenic | 35.0% | |
| TAGATTCGAGAAGCTAGAAA+AGG | + | tig0024927:44271-44290 | Msa1421310:intron | 35.0% | |
| GTGTAACACACATAGATGTT+TGG | + | tig0024927:44396-44415 | Msa1421310:intron | 35.0% | |
| !! | ATATGTTTTTCGATACGCAC+TGG | - | tig0024927:44452-44471 | None:intergenic | 35.0% |
| AATGAATCTCAGTTACTTCG+AGG | + | tig0024927:44494-44513 | Msa1421310:intron | 35.0% | |
| ATGAATCTCAGTTACTTCGA+GGG | + | tig0024927:44495-44514 | Msa1421310:intron | 35.0% | |
| TTAATCTCCACAATTACACG+TGG | + | tig0024927:44519-44538 | Msa1421310:intron | 35.0% | |
| !! | CTATGATGTCAAATTTTGGC+AGG | + | tig0024927:44611-44630 | Msa1421310:intron | 35.0% |
| ATACCGAAACATTATGAACC+CGG | + | tig0024927:44662-44681 | Msa1421310:CDS | 35.0% | |
| GGCCAAGAAAGAAATCATAT+GGG | + | tig0024927:44707-44726 | Msa1421310:CDS | 35.0% | |
| GGTAATAAGTCAACAACTTG+AGG | - | tig0024927:44813-44832 | None:intergenic | 35.0% | |
| !! | CAAGTTGTTGACTTATTACC+TGG | + | tig0024927:44813-44832 | Msa1421310:CDS | 35.0% |
| CAATACACAAACTGTTGCAA+AGG | + | tig0024927:44852-44871 | Msa1421310:CDS | 35.0% | |
| ! | CCAAGCAATTTAAAATCCTG+AGG | - | tig0024927:44978-44997 | None:intergenic | 35.0% |
| ! | CCTCAGGATTTTAAATTGCT+TGG | + | tig0024927:44975-44994 | Msa1421310:CDS | 35.0% |
| ! | GGATTTTAAATTGCTTGGAC+CGG | + | tig0024927:44980-44999 | Msa1421310:CDS | 35.0% |
| ! | GATTTTAAATTGCTTGGACC+GGG | + | tig0024927:44981-45000 | Msa1421310:CDS | 35.0% |
| AGGATCTGCAATTACAATCA+AGG | - | tig0024927:45271-45290 | None:intergenic | 35.0% | |
| ! | ATCCTTTTCGAAAACCTTGA+TGG | + | tig0024927:45286-45305 | Msa1421310:intron | 35.0% |
| ! | AACCATCAAGGTTTTCGAAA+AGG | - | tig0024927:45291-45310 | None:intergenic | 35.0% |
| ATAAGTACATGTCACATTCC+AGG | - | tig0024927:45480-45499 | None:intergenic | 35.0% | |
| GATAAAGAAACACAACAGCT+TGG | - | tig0024927:45527-45546 | None:intergenic | 35.0% | |
| AGATTCAAAGATCCTGAAAG+AGG | + | tig0024927:45986-46005 | Msa1421310:CDS | 35.0% | |
| TTGCTGGAAATAACAAGACT+AGG | + | tig0024927:46009-46028 | Msa1421310:CDS | 35.0% | |
| ! | GTGCATTGCAATAAAGGTTT+TGG | - | tig0024927:46050-46069 | None:intergenic | 35.0% |
| GGGTAACATTACTGAGATTA+GGG | - | tig0024927:46205-46224 | None:intergenic | 35.0% | |
| TGGGTAACATTACTGAGATT+AGG | - | tig0024927:46206-46225 | None:intergenic | 35.0% | |
| CGACGTCTCTAATACAAATT+CGG | + | tig0024927:46369-46388 | Msa1421310:intron | 35.0% | |
| CATTGCAATCAACATGTTTG+TGG | + | tig0024927:46415-46434 | Msa1421310:intron | 35.0% | |
| CATGTGACTCTATGCATTAT+AGG | - | tig0024927:46609-46628 | None:intergenic | 35.0% | |
| CATTTACACTAAAGCAAGGA+TGG | + | tig0024927:46786-46805 | Msa1421310:CDS | 35.0% | |
| CCATTAAAGTATACCCTTCT+AGG | - | tig0024927:46818-46837 | None:intergenic | 35.0% | |
| ! | CCTAGAAGGGTATACTTTAA+TGG | + | tig0024927:46815-46834 | Msa1421310:CDS | 35.0% |
| GTCATCATTACAACACTTGT+AGG | - | tig0024927:46905-46924 | None:intergenic | 35.0% | |
| TCAACTTCAGGCATGGAATT+TGG | + | tig0024927:43759-43778 | Msa1421310:exon | 40.0% | |
| TCAGGCATGGAATTTGGTAA+TGG | + | tig0024927:43765-43784 | Msa1421310:exon | 40.0% | |
| CTCATTCTTATATCTCCAGC+TGG | + | tig0024927:43849-43868 | Msa1421310:CDS | 40.0% | |
| !! | TGTAGAGGCATTTGATCCAT+TGG | + | tig0024927:43977-43996 | Msa1421310:intron | 40.0% |
| TTTGATCCATTGGATCCAAC+TGG | + | tig0024927:43987-44006 | Msa1421310:CDS | 40.0% | |
| TTGATCCATTGGATCCAACT+GGG | + | tig0024927:43988-44007 | Msa1421310:CDS | 40.0% | |
| CTTATTGTCACATTCCCAGT+TGG | - | tig0024927:44005-44024 | None:intergenic | 40.0% | |
| CTGGGAATGTGACAATAAGA+TGG | + | tig0024927:44006-44025 | Msa1421310:CDS | 40.0% | |
| TGTTTGGATCCCTTAACCAT+AGG | + | tig0024927:44412-44431 | Msa1421310:intron | 40.0% | |
| ACACGAACTCCTATGGTTAA+GGG | - | tig0024927:44424-44443 | None:intergenic | 40.0% | |
| TGAATCTCAGTTACTTCGAG+GGG | + | tig0024927:44496-44515 | Msa1421310:intron | 40.0% | |
| CTATCATCCACGTGTAATTG+TGG | - | tig0024927:44529-44548 | None:intergenic | 40.0% | |
| TACCGAAACATTATGAACCC+GGG | + | tig0024927:44663-44682 | Msa1421310:CDS | 40.0% | |
| ATCCCGGGTTCATAATGTTT+CGG | - | tig0024927:44668-44687 | None:intergenic | 40.0% | |
| ATGGACATTAGGATGGACAT+GGG | + | tig0024927:44686-44705 | Msa1421310:CDS | 40.0% | |
| GGGCCAAGAAAGAAATCATA+TGG | + | tig0024927:44706-44725 | Msa1421310:CDS | 40.0% | |
| GGCCCATATGATTTCTTTCT+TGG | - | tig0024927:44712-44731 | None:intergenic | 40.0% | |
| AGAAATCATATGGGCCATGA+TGG | + | tig0024927:44716-44735 | Msa1421310:CDS | 40.0% | |
| GAAATCATATGGGCCATGAT+GGG | + | tig0024927:44717-44736 | Msa1421310:CDS | 40.0% | |
| TGCATATTGTAAGATGCTCC+AGG | - | tig0024927:44834-44853 | None:intergenic | 40.0% | |
| TACACAAACTGTTGCAAAGG+TGG | + | tig0024927:44855-44874 | Msa1421310:CDS | 40.0% | |
| ! | AACTGTCTTGTTAGTCCTTC+CGG | - | tig0024927:44949-44968 | None:intergenic | 40.0% |
| CAAGACAGTTAAACTACCTC+AGG | + | tig0024927:44959-44978 | Msa1421310:CDS | 40.0% | |
| !! | AGCGTTGATTGTAACCATCA+AGG | - | tig0024927:45303-45322 | None:intergenic | 40.0% |
| !! | ACGCTTTAAAGAAACTGTCC+TGG | + | tig0024927:45318-45337 | Msa1421310:intron | 40.0% |
| !!! | TTTTTTCCTATGCAGTGTCC+TGG | + | tig0024927:45459-45478 | Msa1421310:intron | 40.0% |
| CTCGACAGCAGTTTAAAAGT+TGG | - | tig0024927:45660-45679 | None:intergenic | 40.0% | |
| ! | CAACTTTTAAACTGCTGTCG+AGG | + | tig0024927:45658-45677 | Msa1421310:intron | 40.0% |
| TAACTGCTATTGCAGCCATA+TGG | - | tig0024927:45834-45853 | None:intergenic | 40.0% | |
| AACTGCGGCCACAATATAAA+AGG | - | tig0024927:45872-45891 | None:intergenic | 40.0% | |
| TATTTCCAGCAACCTCTTTC+AGG | - | tig0024927:46001-46020 | None:intergenic | 40.0% | |
| ATGGCTTCATAAGGAAGAAG+TGG | - | tig0024927:46251-46270 | None:intergenic | 40.0% | |
| AGATCATACTGGCACATATG+TGG | - | tig0024927:46546-46565 | None:intergenic | 40.0% | |
| GGTTGTGGATAAGATCATAC+TGG | - | tig0024927:46557-46576 | None:intergenic | 40.0% | |
| TTGGATTGCATATGTGGTTG+TGG | - | tig0024927:46572-46591 | None:intergenic | 40.0% | |
| ATTGTGTATGCAGATGACAC+AGG | + | tig0024927:46665-46684 | Msa1421310:intron | 40.0% | |
| GATGACACAGGAATGTTCTA+TGG | + | tig0024927:46677-46696 | Msa1421310:intron | 40.0% | |
| TAAAGGGAATGTGCAATCTG+AGG | + | tig0024927:46739-46758 | Msa1421310:CDS | 40.0% | |
| ! | ATCTGAGGTGCTTATGAAGA+AGG | + | tig0024927:46754-46773 | Msa1421310:CDS | 40.0% |
| ! | AAGAAAGGGTATGAATCAGG+AGG | - | tig0024927:46860-46879 | None:intergenic | 40.0% |
| GAGCAGAATTTGGCAAGAAA+GGG | - | tig0024927:46874-46893 | None:intergenic | 40.0% | |
| TGAGCAGAATTTGGCAAGAA+AGG | - | tig0024927:46875-46894 | None:intergenic | 40.0% | |
| TCTTGCCAAATTCTGCTCAA+AGG | + | tig0024927:46876-46895 | Msa1421310:CDS | 40.0% | |
| TGGAACTTCAACTTCAGGCA+TGG | + | tig0024927:43752-43771 | Msa1421310:exon | 45.0% | |
| ACATTCCCAGTTGGATCCAA+TGG | - | tig0024927:43996-44015 | None:intergenic | 45.0% | |
| GACACGAACTCCTATGGTTA+AGG | - | tig0024927:44425-44444 | None:intergenic | 45.0% | |
| AACCATAGGAGTTCGTGTCA+TGG | + | tig0024927:44426-44445 | Msa1421310:intron | 45.0% | |
| GAAACATTATGAACCCGGGA+TGG | + | tig0024927:44667-44686 | Msa1421310:CDS | 45.0% | |
| GATGGACATTAGGATGGACA+TGG | + | tig0024927:44685-44704 | Msa1421310:CDS | 45.0% | |
| GGACTTCTCTTGCAACTATG+AGG | - | tig0024927:44792-44811 | None:intergenic | 45.0% | |
| AAGGTGGTGTGCTAACATCT+TGG | + | tig0024927:44871-44890 | Msa1421310:CDS | 45.0% | |
| AGGTGGTGTGCTAACATCTT+GGG | + | tig0024927:44872-44891 | Msa1421310:CDS | 45.0% | |
| TGCAATCTCGGCATTTCAGA+TGG | + | tig0024927:44911-44930 | Msa1421310:CDS | 45.0% | |
| GCAATCTCGGCATTTCAGAT+GGG | + | tig0024927:44912-44931 | Msa1421310:CDS | 45.0% | |
| AGCAGGATATTCATGTGGTC+CGG | + | tig0024927:45004-45023 | Msa1421310:CDS | 45.0% | |
| GTTGAAGGAACTCTCTTAGC+CGG | - | tig0024927:45026-45045 | None:intergenic | 45.0% | |
| AACACAACAGCTTGGGTTCT+TGG | - | tig0024927:45519-45538 | None:intergenic | 45.0% | |
| AAGTTGGACAAGCTGTGACT+TGG | - | tig0024927:45565-45584 | None:intergenic | 45.0% | |
| TGACAACCACAAGCACAAGT+TGG | - | tig0024927:45581-45600 | None:intergenic | 45.0% | |
| AAGATCCTGAAAGAGGTTGC+TGG | + | tig0024927:45993-46012 | Msa1421310:CDS | 45.0% | |
| TGGCGTGTGCATTGCAATAA+AGG | - | tig0024927:46056-46075 | None:intergenic | 45.0% | |
| AATGCACACGAACAGGACAA+AGG | - | tig0024927:46079-46098 | None:intergenic | 45.0% | |
| TTTGTCCTGTTCGTGTGCAT+TGG | + | tig0024927:46078-46097 | Msa1421310:CDS | 45.0% | |
| ATATGCCAATGCACACGAAC+AGG | - | tig0024927:46086-46105 | None:intergenic | 45.0% | |
| ! | ATAATGGAAGCTGGGGCTAA+AGG | + | tig0024927:46722-46741 | Msa1421310:CDS | 45.0% |
| TAATGGAAGCTGGGGCTAAA+GGG | + | tig0024927:46723-46742 | Msa1421310:CDS | 45.0% | |
| !! | AAGGATGGGCTTTTCCTAGA+AGG | + | tig0024927:46801-46820 | Msa1421310:CDS | 45.0% |
| !! | AGGATGGGCTTTTCCTAGAA+GGG | + | tig0024927:46802-46821 | Msa1421310:CDS | 45.0% |
| ! | AAAGGGTATGAATCAGGAGG+TGG | - | tig0024927:46857-46876 | None:intergenic | 45.0% |
| ! | GGCAAGAAAGGGTATGAATC+AGG | - | tig0024927:46863-46882 | None:intergenic | 45.0% |
| GGTAGCCTTTGAGCAGAATT+TGG | - | tig0024927:46884-46903 | None:intergenic | 45.0% | |
| !! | GATTAAAAAAATAAATAAAT+TGG | - | tig0024927:46476-46495 | None:intergenic | 5.0% |
| ATGAACCCGGGATGGACATT+AGG | + | tig0024927:44675-44694 | Msa1421310:CDS | 50.0% | |
| TCCATCCTAATGTCCATCCC+GGG | - | tig0024927:44683-44702 | None:intergenic | 50.0% | |
| GTCCATCCTAATGTCCATCC+CGG | - | tig0024927:44684-44703 | None:intergenic | 50.0% | |
| GGTGGTGTGCTAACATCTTG+GGG | + | tig0024927:44873-44892 | Msa1421310:CDS | 50.0% | |
| TGTGCTAACATCTTGGGGAC+AGG | + | tig0024927:44878-44897 | Msa1421310:CDS | 50.0% | |
| ATGCCGAGATTGCACCTGAA+GGG | - | tig0024927:44905-44924 | None:intergenic | 50.0% | |
| AATGCCGAGATTGCACCTGA+AGG | - | tig0024927:44906-44925 | None:intergenic | 50.0% | |
| TCGGCATTTCAGATGGGTGT+AGG | + | tig0024927:44918-44937 | Msa1421310:CDS | 50.0% | |
| CCACATGAATATCCTGCTCC+CGG | - | tig0024927:45002-45021 | None:intergenic | 50.0% | |
| CTGCAATACGACTGAGACTG+AGG | - | tig0024927:45218-45237 | None:intergenic | 50.0% | |
| CACAAAGCGACGATCACTAC+AGG | + | tig0024927:45385-45404 | Msa1421310:intron | 50.0% | |
| CACATTCCAGGACACTGCAT+AGG | - | tig0024927:45468-45487 | None:intergenic | 50.0% | |
| ACAACAGCTTGGGTTCTTGG+AGG | - | tig0024927:45516-45535 | None:intergenic | 50.0% | |
| GCTTGTCCAACTTGTGCTTG+TGG | + | tig0024927:45572-45591 | Msa1421310:CDS | 50.0% | |
| GACGGTCCAGATTTCAAGCT+TGG | - | tig0024927:46506-46525 | None:intergenic | 50.0% | |
| GGCCATGACACGAACTCCTA+TGG | - | tig0024927:44431-44450 | None:intergenic | 55.0% | |
| ACCCGGGATGGACATTAGGA+TGG | + | tig0024927:44679-44698 | Msa1421310:CDS | 55.0% | |
| ! | TGTTGCTTGCGCTCCCATCA+TGG | - | tig0024927:44733-44752 | None:intergenic | 55.0% |
| GGAGCGCAAGCAACAGAACA+AGG | + | tig0024927:44738-44757 | Msa1421310:CDS | 55.0% | |
| GGACCCTTCAGGTGCAATCT+CGG | + | tig0024927:44899-44918 | Msa1421310:CDS | 55.0% | |
| CAGATGGGTGTAGGACTCTC+CGG | + | tig0024927:44927-44946 | Msa1421310:CDS | 55.0% | |
| AAATTGCTTGGACCGGGAGC+AGG | + | tig0024927:44987-45006 | Msa1421310:CDS | 55.0% | |
| CCGGGAGCAGGATATTCATG+TGG | + | tig0024927:44999-45018 | Msa1421310:CDS | 55.0% | |
| GCACACGAACAGGACAAAGG+TGG | - | tig0024927:46076-46095 | None:intergenic | 55.0% | |
| TCTTGGGGACAGGACCCTTC+AGG | + | tig0024927:44888-44907 | Msa1421310:CDS | 60.0% | |
| TGGGTGTAGGACTCTCCGGA+AGG | + | tig0024927:44931-44950 | Msa1421310:CDS | 60.0% | |
| GCGTCCTGTGACTGCAACTG+CGG | - | tig0024927:45887-45906 | None:intergenic | 60.0% | |
| GTGGCCGCAGTTGCAGTCAC+AGG | + | tig0024927:45880-45899 | Msa1421310:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0024927 | gene | 43741 | 46964 | 43741 | ID=Msa1421310;Name=Msa1421310 |
| tig0024927 | mRNA | 43741 | 46964 | 43741 | ID=Msa1421310-mRNA-1;Parent=Msa1421310;Name=Msa1421310-mRNA-1;_AED=0.10;_eAED=0.10;_QI=30|1|0.83|1|1|1|6|0|453 |
| tig0024927 | exon | 43741 | 43870 | 43741 | ID=Msa1421310-mRNA-1:exon:2028;Parent=Msa1421310-mRNA-1 |
| tig0024927 | exon | 43982 | 44061 | 43982 | ID=Msa1421310-mRNA-1:exon:2029;Parent=Msa1421310-mRNA-1 |
| tig0024927 | exon | 44633 | 45089 | 44633 | ID=Msa1421310-mRNA-1:exon:2030;Parent=Msa1421310-mRNA-1 |
| tig0024927 | exon | 45474 | 45621 | 45474 | ID=Msa1421310-mRNA-1:exon:2031;Parent=Msa1421310-mRNA-1 |
| tig0024927 | exon | 45983 | 46272 | 45983 | ID=Msa1421310-mRNA-1:exon:2032;Parent=Msa1421310-mRNA-1 |
| tig0024927 | exon | 46678 | 46964 | 46678 | ID=Msa1421310-mRNA-1:exon:2033;Parent=Msa1421310-mRNA-1 |
| tig0024927 | five_prime_UTR | 43741 | 43770 | 43741 | ID=Msa1421310-mRNA-1:five_prime_utr;Parent=Msa1421310-mRNA-1 |
| tig0024927 | CDS | 43771 | 43870 | 43771 | ID=Msa1421310-mRNA-1:cds;Parent=Msa1421310-mRNA-1 |
| tig0024927 | CDS | 43982 | 44061 | 43982 | ID=Msa1421310-mRNA-1:cds;Parent=Msa1421310-mRNA-1 |
| tig0024927 | CDS | 44633 | 45089 | 44633 | ID=Msa1421310-mRNA-1:cds;Parent=Msa1421310-mRNA-1 |
| tig0024927 | CDS | 45474 | 45621 | 45474 | ID=Msa1421310-mRNA-1:cds;Parent=Msa1421310-mRNA-1 |
| tig0024927 | CDS | 45983 | 46272 | 45983 | ID=Msa1421310-mRNA-1:cds;Parent=Msa1421310-mRNA-1 |
| tig0024927 | CDS | 46678 | 46964 | 46678 | ID=Msa1421310-mRNA-1:cds;Parent=Msa1421310-mRNA-1 |
| Gene Sequence |
| Protein sequence |
