AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1162860

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1162860 MtrunA17_Chr7g0258811 95.601 341 15 0 1 341 33 373 0.0 665
Msa1162860 MtrunA17_Chr1g0175561 76.292 329 77 1 13 341 1 328 0.0 512
Msa1162860 MtrunA17_Chr2g0292211 62.013 308 116 1 32 339 35 341 1.86e-134 387
Msa1162860 MtrunA17_Chr2g0292241 59.283 307 124 1 33 339 25 330 1.45e-130 377
Msa1162860 MtrunA17_Chr2g0292251 60.586 307 120 1 33 339 24 329 2.17e-130 376
Msa1162860 MtrunA17_Chr2g0292181 56.402 328 140 2 14 339 13 339 9.53e-129 372
Msa1162860 MtrunA17_Chr2g0292271 57.273 330 140 1 11 340 3 331 1.29e-128 372
Msa1162860 MtrunA17_Chr2g0292151 58.958 307 125 1 33 339 25 330 9.97e-127 367
Msa1162860 MtrunA17_Chr2g0292261 56.839 329 139 2 14 340 4 331 7.74e-126 364
Msa1162860 MtrunA17_Chr2g0291751 57.585 323 136 1 17 339 9 330 9.65e-126 364
Msa1162860 MtrunA17_Chr2g0292091 57.508 313 132 1 28 340 15 326 2.72e-125 363
Msa1162860 MtrunA17_Chr2g0292111 57.655 307 129 1 33 339 25 330 2.00e-124 361
Msa1162860 MtrunA17_Chr4g0070951 54.878 328 143 2 14 339 5 329 2.82e-123 357
Msa1162860 MtrunA17_Chr2g0299691 54.012 324 143 2 19 339 38 358 8.35e-122 355
Msa1162860 MtrunA17_Chr2g0292291 55.623 329 142 3 14 339 5 332 6.46e-121 352
Msa1162860 MtrunA17_Chr2g0292101 56.550 313 135 1 28 340 16 327 4.28e-120 350
Msa1162860 MtrunA17_Chr3g0129051 53.916 332 134 6 10 339 8 322 1.24e-117 342
Msa1162860 MtrunA17_Chr3g0129061 54.517 321 134 5 21 339 12 322 2.79e-113 332
Msa1162860 MtrunA17_Chr5g0404721 52.475 303 142 2 37 339 30 330 8.55e-113 330
Msa1162860 MtrunA17_Chr5g0402571 52.500 320 147 4 21 339 11 326 2.49e-110 324
Msa1162860 MtrunA17_Chr3g0129041 53.894 321 136 5 21 339 12 322 6.84e-110 323
Msa1162860 MtrunA17_Chr8g0372601 51.485 303 145 2 37 339 30 330 7.44e-108 318
Msa1162860 MtrunA17_Chr5g0402581 50.938 320 152 4 21 339 11 326 5.57e-107 316
Msa1162860 MtrunA17_Chr3g0114451 51.974 304 136 3 36 339 25 318 1.38e-106 314
Msa1162860 MtrunA17_Chr5g0438021 48.750 320 152 5 22 339 16 325 4.38e-105 311
Msa1162860 MtrunA17_Chr2g0320071 48.615 325 155 4 17 339 3 317 9.89e-105 310
Msa1162860 MtrunA17_Chr3g0106921 49.695 328 151 7 15 339 4 320 1.90e-104 309
Msa1162860 MtrunA17_Chr2g0320061 48.000 325 158 4 17 339 3 318 6.65e-102 302
Msa1162860 MtrunA17_Chr2g0320031 47.059 323 160 4 18 339 7 319 6.72e-102 302
Msa1162860 MtrunA17_Chr2g0320101 49.080 326 152 5 17 339 3 317 4.61e-101 300
Msa1162860 MtrunA17_Chr2g0320051 48.308 325 157 4 17 339 3 318 6.54e-101 300
Msa1162860 MtrunA17_Chr4g0013171 47.432 331 160 6 13 339 1 321 1.69e-100 299
Msa1162860 MtrunA17_Chr4g0038171 48.916 323 150 5 22 339 9 321 2.75e-100 298
Msa1162860 MtrunA17_Chr4g0043391 47.975 321 156 4 22 339 12 324 4.74e-100 298
Msa1162860 MtrunA17_Chr7g0244461 45.455 319 164 3 21 339 4 312 1.81e-98 293
Msa1162860 MtrunA17_Chr5g0432441 47.368 323 154 6 22 339 15 326 2.99e-98 293
Msa1162860 MtrunA17_Chr4g0038151 47.826 322 155 5 22 339 9 321 8.96e-98 292
Msa1162860 MtrunA17_Chr2g0320091 47.239 326 159 5 17 339 3 318 1.02e-97 292
Msa1162860 MtrunA17_Chr4g0038161 47.975 321 155 4 22 339 9 320 6.85e-97 290
Msa1162860 MtrunA17_Chr1g0155611 47.525 303 158 1 37 339 46 347 5.81e-96 288
Msa1162860 MtrunA17_Chr4g0013201 45.741 317 162 3 23 339 32 338 3.36e-95 286
Msa1162860 MtrunA17_Chr5g0400331 47.557 307 156 3 37 339 26 331 3.64e-94 283
Msa1162860 MtrunA17_Chr1g0213061 44.753 324 166 6 18 339 9 321 8.51e-94 282
Msa1162860 MtrunA17_Chr5g0432351 45.062 324 166 5 19 339 7 321 1.77e-93 281
Msa1162860 MtrunA17_Chr5g0432341 45.370 324 165 5 19 339 7 321 1.91e-93 281
Msa1162860 MtrunA17_Chr4g0013721 43.478 345 181 6 3 339 58 396 7.54e-93 283
Msa1162860 MtrunA17_Chr7g0244451 46.519 316 159 3 24 339 11 316 1.19e-92 279
Msa1162860 MtrunA17_Chr4g0068621 46.205 303 159 3 37 339 38 336 2.71e-92 278
Msa1162860 MtrunA17_Chr4g0013821 43.344 323 172 5 23 340 9 325 5.10e-92 278
Msa1162860 MtrunA17_Chr5g0432331 44.860 321 165 5 22 339 41 352 2.59e-91 276
Msa1162860 MtrunA17_Chr3g0106901 45.141 319 165 3 21 339 15 323 6.52e-91 275
Msa1162860 MtrunA17_Chr4g0013181 47.176 301 147 5 41 339 63 353 6.81e-91 276
Msa1162860 MtrunA17_Chr4g0024121 41.768 328 186 4 13 339 3 326 2.81e-88 268
Msa1162860 MtrunA17_Chr3g0107881 43.692 325 172 4 18 339 8 324 1.27e-87 266
Msa1162860 MtrunA17_Chr2g0322861 44.237 321 171 6 22 339 71 386 1.36e-87 268
Msa1162860 MtrunA17_Chr3g0128061 42.462 325 177 4 19 339 8 326 1.73e-87 266
Msa1162860 MtrunA17_Chr4g0063671 45.031 322 161 7 25 339 8 320 2.75e-86 263
Msa1162860 MtrunA17_Chr4g0013191 44.551 312 165 4 28 339 37 340 1.15e-85 262
Msa1162860 MtrunA17_Chr7g0254201 43.322 307 164 6 33 339 16 312 2.33e-84 258
Msa1162860 MtrunA17_Chr7g0268501 43.653 323 174 6 18 339 5 320 8.99e-84 256
Msa1162860 MtrunA17_Chr7g0268521 43.653 323 174 6 18 339 5 320 8.99e-84 256
Msa1162860 MtrunA17_Chr6g0477071 43.322 307 156 8 35 339 52 342 1.60e-81 251
Msa1162860 MtrunA17_Chr6g0460711 43.125 320 172 8 21 339 4 314 1.10e-80 248
Msa1162860 MtrunA17_Chr2g0279041 42.342 333 178 7 13 339 1 325 3.95e-80 247
Msa1162860 MtrunA17_Chr1g0148021 42.296 331 184 5 13 339 1 328 4.38e-80 247
Msa1162860 MtrunA17_Chr1g0204011 40.615 325 179 7 16 339 11 322 4.47e-80 247
Msa1162860 MtrunA17_Chr5g0405991 41.433 321 177 8 20 339 6 316 4.77e-80 246
Msa1162860 MtrunA17_Chr7g0224371 41.176 323 178 5 19 340 12 323 2.05e-79 245
Msa1162860 MtrunA17_Chr2g0329641 41.424 309 168 6 36 339 35 335 2.21e-79 246
Msa1162860 MtrunA17_Chr1g0188431 40.557 323 178 6 17 339 19 327 1.19e-78 243
Msa1162860 MtrunA17_Chr8g0371381 42.763 304 163 8 37 339 26 319 3.85e-78 242
Msa1162860 MtrunA17_Chr5g0421411 42.509 287 159 6 57 339 1 285 1.45e-77 239
Msa1162860 MtrunA17_Chr6g0467161 40.476 336 177 8 14 339 14 336 2.29e-76 238
Msa1162860 MtrunA17_Chr2g0296621 41.830 306 163 9 37 340 50 342 1.84e-75 236
Msa1162860 MtrunA17_Chr4g0076211 41.806 299 162 6 42 339 46 333 3.44e-75 235
Msa1162860 MtrunA17_Chr4g0072091 42.857 308 165 4 36 339 23 323 4.35e-75 234
Msa1162860 MtrunA17_Chr1g0157051 40.432 324 183 7 17 339 4 318 1.09e-74 233
Msa1162860 MtrunA17_Chr7g0225221 40.566 318 178 5 24 339 12 320 2.06e-74 232
Msa1162860 MtrunA17_Chr1g0194151 40.240 333 185 7 18 339 4 333 1.05e-73 231
Msa1162860 MtrunA17_Chr5g0432401 40.741 324 141 6 18 338 10 285 7.46e-73 227
Msa1162860 MtrunA17_Chr4g0046131 37.941 340 189 7 15 335 6 342 8.56e-73 229
Msa1162860 MtrunA17_Chr1g0194271 39.412 340 185 8 18 339 4 340 6.10e-72 226
Msa1162860 MtrunA17_Chr2g0316481 37.651 332 175 4 37 338 76 405 1.81e-71 228
Msa1162860 MtrunA17_Chr4g0053871 40.938 320 176 6 21 335 9 320 1.84e-71 225
Msa1162860 MtrunA17_Chr1g0164891 40.924 303 172 5 41 339 93 392 1.98e-71 227
Msa1162860 MtrunA17_Chr5g0401431 38.750 320 188 5 20 335 10 325 4.16e-71 224
Msa1162860 MtrunA17_Chr7g0254231 40.196 306 168 7 35 339 20 311 6.91e-71 223
Msa1162860 MtrunA17_Chr2g0316791 37.952 332 174 4 37 338 76 405 6.94e-71 226
Msa1162860 MtrunA17_Chr2g0316831 37.651 332 175 4 37 338 112 441 3.58e-70 225
Msa1162860 MtrunA17_Chr6g0467121 39.941 338 174 8 17 340 42 364 4.75e-70 223
Msa1162860 MtrunA17_Chr2g0292281 54.762 210 85 2 130 339 17 216 8.20e-70 218
Msa1162860 MtrunA17_Chr1g0197411 36.585 328 204 3 14 339 5 330 2.11e-69 220
Msa1162860 MtrunA17_Chr2g0311251 37.952 332 173 5 37 338 11 339 2.47e-69 220
Msa1162860 MtrunA17_Chr2g0316191 36.937 333 177 4 37 338 76 406 1.02e-68 220
Msa1162860 MtrunA17_Chr2g0278671 39.048 315 179 7 30 339 17 323 5.43e-68 216
Msa1162860 MtrunA17_Chr2g0279061 45.627 263 131 5 81 339 12 266 2.15e-66 210
Msa1162860 MtrunA17_Chr8g0364291 37.383 321 196 4 21 339 7 324 7.94e-66 211
Msa1162860 MtrunA17_Chr2g0311241 34.921 378 168 8 37 341 60 432 3.59e-64 209
Msa1162860 MtrunA17_Chr5g0413051 36.774 310 188 5 35 339 71 377 1.09e-63 206
Msa1162860 MtrunA17_Chr3g0136751 37.888 322 189 5 21 339 9 322 7.96e-63 202
Msa1162860 MtrunA17_Chr1g0181511 36.570 309 184 6 35 340 25 324 3.49e-62 201
Msa1162860 MtrunA17_Chr6g0467251 36.842 304 182 4 32 335 31 324 3.12e-60 197
Msa1162860 MtrunA17_Chr6g0451571 35.962 317 195 5 26 339 23 334 6.24e-59 193
Msa1162860 MtrunA17_Chr1g0181431 35.599 309 187 6 35 340 25 324 9.47e-59 192
Msa1162860 MtrunA17_Chr4g0075241 35.410 305 191 4 36 339 28 327 4.53e-58 190
Msa1162860 MtrunA17_Chr1g0181481 35.599 309 187 6 35 340 25 324 1.96e-57 189
Msa1162860 MtrunA17_Chr4g0074851 35.314 303 182 6 37 335 32 324 5.38e-57 188
Msa1162860 MtrunA17_Chr3g0114461 46.597 191 94 2 149 339 10 192 7.65e-54 175
Msa1162860 MtrunA17_Chr2g0316811 36.042 283 136 3 37 274 50 332 9.36e-52 174
Msa1162860 MtrunA17_Chr4g0004591 31.366 322 158 4 37 338 77 355 1.29e-49 169
Msa1162860 MtrunA17_Chr2g0316141 33.101 287 141 6 83 338 11 277 1.62e-43 151
Msa1162860 MtrunA17_Chr2g0316181 33.101 287 141 6 83 338 11 277 1.62e-43 151
Msa1162860 MtrunA17_Chr3g0114491 60.909 110 42 1 36 145 17 125 3.97e-39 135
Msa1162860 MtrunA17_Chr1g0181501 33.846 195 118 5 149 340 4 190 5.21e-29 110
Msa1162860 MtrunA17_Chr2g0316771 29.121 182 95 4 188 338 7 185 1.44e-21 90.5
Msa1162860 MtrunA17_Chr5g0432321 38.710 124 68 2 159 282 17 132 1.94e-21 88.6
Msa1162860 MtrunA17_Chr3g0104101 36.620 142 85 5 202 339 9 149 5.07e-21 88.2
Msa1162860 MtrunA17_Chr7g0254181 40.952 105 58 2 100 204 22 122 4.97e-19 82.8
Msa1162860 MtrunA17_Chr6g0468731 56.944 72 26 2 76 147 22 88 2.05e-18 79.0
Msa1162860 MtrunA17_Chr5g0432361 40.860 93 54 1 246 338 17 108 1.07e-17 77.8
Msa1162860 MtrunA17_Chr1g0181491 38.053 113 67 3 35 147 10 119 2.43e-17 77.8
Msa1162860 MtrunA17_Chr7g0254171 31.852 135 90 1 83 217 4 136 1.44e-14 70.1
Msa1162860 MtrunA17_Chr7g0268491 46.429 84 42 2 256 339 17 97 5.10e-14 67.4
Msa1162860 MtrunA17_Chr4g0013811 40.541 74 44 0 148 221 5 78 1.13e-13 65.9
Msa1162860 MtrunA17_Chr3g0124821 28.000 200 110 6 131 321 180 354 2.36e-13 70.5
Msa1162860 MtrunA17_Chr3g0137751 26.275 255 137 8 69 320 106 312 3.54e-13 69.3
Msa1162860 MtrunA17_Chr1g0196191 51.316 76 33 3 71 146 21 92 3.74e-12 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1162860 AT5G06720.1 70.303 330 93 2 16 341 7 335 2.75e-168 472
Msa1162860 AT5G06730.1 67.901 324 101 2 19 340 13 335 3.72e-159 449
Msa1162860 AT2G38380.1 56.325 332 138 5 14 339 3 333 1.46e-125 364
Msa1162860 AT2G38390.1 56.169 308 133 2 33 339 27 333 2.84e-124 361
Msa1162860 AT3G32980.1 55.255 333 141 5 14 339 3 334 3.94e-122 355
Msa1162860 AT5G19880.1 54.517 321 143 3 22 339 9 329 1.61e-121 353
Msa1162860 AT4G08780.1 54.693 309 137 3 33 339 20 327 4.36e-121 352
Msa1162860 AT5G19890.1 53.593 334 144 5 8 339 3 327 1.84e-118 345
Msa1162860 AT4G08770.1 54.369 309 138 3 33 339 20 327 5.51e-118 345
Msa1162860 AT3G49110.1 54.154 325 141 4 22 339 13 336 1.33e-117 344
Msa1162860 AT3G49120.1 53.846 325 145 4 19 339 12 335 1.53e-117 344
Msa1162860 AT2G18140.1 52.824 301 140 2 41 341 39 337 3.00e-113 332
Msa1162860 AT5G66390.1 51.792 307 146 2 33 339 29 333 3.77e-113 332
Msa1162860 AT2G18150.1 53.488 301 138 2 41 341 40 338 5.01e-113 332
Msa1162860 AT4G36430.1 52.787 305 142 2 35 339 28 330 1.18e-112 330
Msa1162860 AT3G50990.1 50.814 307 149 2 33 339 37 341 5.88e-109 322
Msa1162860 AT5G05340.1 51.623 308 137 5 34 339 27 324 1.69e-105 312
Msa1162860 AT1G44970.1 49.673 306 153 1 34 339 42 346 7.39e-101 301
Msa1162860 AT1G49570.1 49.338 302 147 4 37 335 48 346 8.60e-100 298
Msa1162860 AT2G35380.1 50.489 307 147 4 37 339 30 335 9.28e-98 293
Msa1162860 AT5G58390.1 48.447 322 153 6 21 339 5 316 4.43e-96 288
Msa1162860 AT1G14550.1 45.342 322 167 4 19 339 8 321 5.15e-96 288
Msa1162860 AT5G58400.1 46.894 322 158 6 21 339 14 325 1.86e-94 284
Msa1162860 AT1G14540.1 45.652 322 165 4 20 339 2 315 2.64e-94 283
Msa1162860 AT2G22420.1 43.574 319 174 4 21 339 7 319 2.80e-92 278
Msa1162860 AT5G17820.1 44.340 318 163 6 23 339 9 313 4.98e-91 275
Msa1162860 AT3G03670.1 45.938 320 167 4 22 339 6 321 5.29e-90 273
Msa1162860 AT5G17820.2 44.340 318 163 6 23 339 62 366 6.69e-90 274
Msa1162860 AT1G68850.1 44.051 311 161 8 37 339 30 335 1.09e-89 272
Msa1162860 AT4G16270.1 45.333 300 158 5 41 339 54 348 2.92e-87 266
Msa1162860 AT5G64120.1 46.823 299 150 6 41 339 39 328 5.34e-87 265
Msa1162860 AT2G18980.1 44.308 325 169 5 19 339 7 323 5.90e-86 262
Msa1162860 AT3G21770.1 43.450 313 168 6 26 335 18 324 9.13e-86 262
Msa1162860 AT4G11290.1 42.724 323 179 5 20 339 7 326 2.85e-84 258
Msa1162860 AT2G41480.1 42.508 327 174 5 19 339 10 328 1.49e-83 256
Msa1162860 AT5G39580.1 46.273 322 160 9 22 339 7 319 2.07e-83 256
Msa1162860 AT1G05260.1 42.138 318 175 6 25 339 14 325 2.84e-83 255
Msa1162860 AT4G30170.1 43.042 309 164 5 35 339 25 325 3.13e-81 250
Msa1162860 AT4G37530.1 44.089 313 169 4 30 339 20 329 1.78e-79 246
Msa1162860 AT3G01190.1 40.694 317 180 6 24 339 12 321 2.22e-79 245
Msa1162860 AT5G15180.1 39.319 323 187 6 21 339 12 329 5.85e-79 244
Msa1162860 AT4G25980.1 40.938 320 177 5 25 339 14 326 1.58e-78 243
Msa1162860 AT5G14130.1 40.000 335 190 5 6 339 6 330 1.67e-78 243
Msa1162860 AT5G51890.1 41.049 324 179 8 18 339 9 322 1.81e-78 243
Msa1162860 AT5G14130.2 40.000 335 190 5 6 339 47 371 5.47e-78 243
Msa1162860 AT5G42180.1 41.456 316 175 7 24 338 10 316 1.07e-77 241
Msa1162860 AT1G77100.1 42.638 326 170 7 20 339 5 319 1.88e-77 240
Msa1162860 AT3G49960.1 43.125 320 174 6 24 339 14 329 5.62e-77 239
Msa1162860 AT4G37520.1 42.105 304 170 4 35 335 25 325 4.99e-76 237
Msa1162860 AT2G39040.1 42.308 312 170 6 34 339 43 350 1.90e-75 236
Msa1162860 AT4G33420.1 40.994 322 170 8 24 339 18 325 2.21e-74 233
Msa1162860 AT2G43480.1 39.185 319 178 8 28 339 26 335 8.05e-74 231
Msa1162860 AT1G71695.1 42.810 306 164 6 32 335 39 335 8.26e-74 232
Msa1162860 AT4G33420.2 40.994 322 170 8 24 339 65 372 1.02e-73 233
Msa1162860 AT1G05240.1 39.799 299 169 5 41 335 30 321 1.27e-73 231
Msa1162860 AT1G05250.1 39.799 299 169 5 41 335 30 321 1.27e-73 231
Msa1162860 AT4G37520.2 41.447 304 169 5 35 335 25 322 2.30e-73 230
Msa1162860 AT5G64110.1 41.337 329 176 7 19 339 11 330 2.45e-73 230
Msa1162860 AT4G33870.1 36.283 339 177 5 34 337 65 399 3.36e-72 229
Msa1162860 AT5G64100.1 41.667 300 165 6 41 339 41 331 4.41e-72 227
Msa1162860 AT2G35380.2 50.000 246 119 3 98 339 2 247 5.17e-72 224
Msa1162860 AT5G24070.1 39.937 318 174 9 30 340 29 336 3.09e-71 225
Msa1162860 AT2G34060.1 38.436 307 183 5 34 336 39 343 5.31e-71 224
Msa1162860 AT4G37530.2 46.360 261 136 3 30 287 20 279 5.37e-71 223
Msa1162860 AT5G67400.1 40.367 327 185 8 14 335 4 325 6.38e-71 224
Msa1162860 AT4G26010.1 40.000 320 168 9 25 339 9 309 2.55e-69 219
Msa1162860 AT4G26010.2 40.000 320 168 9 25 339 37 337 4.38e-69 219
Msa1162860 AT1G34510.1 39.117 317 175 8 25 339 9 309 6.92e-68 216
Msa1162860 AT5G22410.1 40.498 321 173 11 24 336 12 322 1.75e-67 215
Msa1162860 AT2G24800.1 39.159 309 176 5 35 339 29 329 6.13e-67 214
Msa1162860 AT1G30870.1 38.636 308 171 8 37 339 51 345 1.09e-66 214
Msa1162860 AT4G17690.1 38.689 305 177 5 37 339 26 322 1.32e-66 213
Msa1162860 AT4G31760.1 38.889 324 183 6 23 339 11 326 2.71e-66 212
Msa1162860 AT5G47000.1 35.562 329 201 7 14 339 10 330 8.68e-66 211
Msa1162860 AT1G24110.1 36.364 319 195 6 25 339 8 322 2.91e-63 204
Msa1162860 AT4G21960.1 36.721 305 175 6 37 335 31 323 7.33e-62 201
Msa1162860 AT3G28200.1 33.871 310 192 4 33 339 17 316 9.42e-60 195
Msa1162860 AT5G40150.1 34.740 308 193 3 33 339 28 328 2.81e-57 189
Msa1162860 AT2G37130.1 33.333 309 193 5 35 339 28 327 1.62e-54 181
Msa1162860 AT2G37130.2 33.663 303 188 5 41 339 3 296 2.29e-54 180
Msa1162860 AT3G17070.1 34.483 319 176 8 37 339 38 339 4.01e-51 173
Msa1162860 AT4G25980.2 45.355 183 95 3 25 207 59 236 4.50e-47 161
Msa1162860 AT5G39580.2 46.939 196 95 6 22 214 7 196 3.88e-46 157
Msa1162860 AT2G24800.2 40.462 173 98 1 35 207 29 196 1.08e-36 132
Msa1162860 AT3G17070.2 31.959 291 164 9 65 339 4 276 4.89e-36 132
Msa1162860 AT4G35970.1 28.017 232 117 8 94 321 55 240 3.87e-15 75.1
Msa1162860 AT3G42570.1 36.634 101 63 1 106 205 49 149 1.80e-14 70.5
Msa1162860 AT1G77490.2 26.894 264 150 11 71 321 106 339 3.73e-14 73.6
Msa1162860 AT1G77490.1 26.894 264 150 11 71 321 106 339 4.48e-14 73.2
Msa1162860 AT4G35970.2 29.949 197 90 7 94 286 55 207 3.20e-13 68.6
Msa1162860 AT4G08390.3 24.427 262 159 8 71 321 126 359 8.38e-13 68.9
Msa1162860 AT4G08390.2 24.427 262 159 8 71 321 127 360 9.40e-13 68.9
Msa1162860 AT4G08390.5 24.427 262 159 8 71 321 127 360 9.40e-13 68.9
Msa1162860 AT4G08390.1 24.427 262 159 8 71 321 127 360 9.40e-13 68.9

Find 64 sgRNAs with CRISPR-Local

Find 190 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTCCTTGACTTCCCATTAA+TGG 0.180025 7_4:-53674768 None:intergenic
GGGTAATATCAGTCCATTAA+TGG 0.236886 7_4:+53674755 Msa1162860:CDS
AGTGATCTTGTTGCATTATC+TGG 0.246387 7_4:+53674021 Msa1162860:CDS
TGCTGAAGCTTCTGTATCTT+TGG 0.257038 7_4:+53673605 Msa1162860:CDS
TAAGCCAACAGCAGCAAATT+TGG 0.265842 7_4:-53673992 None:intergenic
TCCAATTGTAGGAAAGTTAA+TGG 0.269235 7_4:+53674798 Msa1162860:CDS
AGAAACATTGGGGCATGTTT+TGG 0.272122 7_4:-53673231 None:intergenic
TCCATTAACTTTCCTACAAT+TGG 0.278391 7_4:-53674799 None:intergenic
CGTGTCTTGTGCTGATATTT+TGG 0.281472 7_4:+53673575 Msa1162860:CDS
GATTATTAGCACTGTGAAAA+TGG 0.288329 7_4:-53673162 None:intergenic
TAGTTGTTGTCGAAATTATT+TGG 0.298058 7_4:-53674582 None:intergenic
TGGCTTCTTAGTGTCTTCTT+TGG 0.298622 7_4:-53673114 None:intergenic
GCTAAGCTTTCAGTTGGATT+AGG 0.331908 7_4:-53673958 None:intergenic
CATTAGTGGAAAACAATTCT+TGG 0.347221 7_4:-53674647 None:intergenic
CCACGAGCTGAATTATTGTT+TGG 0.353657 7_4:-53673498 None:intergenic
CTGAACAGCATTTCTCACTA+TGG 0.374100 7_4:-53673255 None:intergenic
TGCAGTCAGGAGGTCCTTCA+TGG 0.392241 7_4:+53673872 Msa1162860:intron
CACTGAAGTTGAATAGTCTT+TGG 0.398801 7_4:-53674449 None:intergenic
TCGAAATTATTTGGTGATGA+AGG 0.400046 7_4:-53674573 None:intergenic
GAATTAGGTGCACATACTTT+CGG 0.400492 7_4:+53674402 Msa1162860:intron
GGTAATATCAGTCCATTAAT+GGG 0.424844 7_4:+53674756 Msa1162860:CDS
ACCGCCAAATTTGCTGCTGT+TGG 0.433009 7_4:+53673988 Msa1162860:CDS
CTCACTATGGAAGAAACATT+GGG 0.436946 7_4:-53673242 None:intergenic
GTTGAATTCAGTGTTGGATC+AGG 0.449005 7_4:-53674483 None:intergenic
GATTGTAGCAGCACCATTAG+TGG 0.460308 7_4:-53674661 None:intergenic
GAGAAATTAGATCCAATTGT+AGG 0.464574 7_4:+53674787 Msa1162860:CDS
AGCAAATTTGGCGGTGACAT+TGG 0.471266 7_4:-53673980 None:intergenic
CGAAATTATTTGGTGATGAA+GGG 0.477837 7_4:-53674572 None:intergenic
GATATTACCCATGTTAATCA+TGG 0.480311 7_4:-53674742 None:intergenic
GGTCTGATTGCAAACCAATC+TGG 0.483029 7_4:+53673919 Msa1162860:CDS
GCTTTCAGTTGGATTAGGAA+TGG 0.497949 7_4:-53673953 None:intergenic
TCTCACTATGGAAGAAACAT+TGG 0.503003 7_4:-53673243 None:intergenic
ACATTGGCTAAGCTTTCAGT+TGG 0.503769 7_4:-53673964 None:intergenic
AAATCAAGGTCTTCTTCAAA+CGG 0.509165 7_4:+53674623 Msa1162860:CDS
CCTTCATGGAATGTACTACT+TGG 0.512650 7_4:+53673886 Msa1162860:CDS
GAGCATGTGATGGATTAAGA+AGG 0.529837 7_4:-53673187 None:intergenic
TGTTCAGTCCATGATTAACA+TGG 0.539490 7_4:+53674734 Msa1162860:CDS
AGATATGTTGAATTCAGTGT+TGG 0.541731 7_4:-53674489 None:intergenic
AAAGTAGGAGAAAACATGGT+TGG 0.544154 7_4:-53673134 None:intergenic
CTATTCAACTTCAGTGGCAC+GGG 0.548890 7_4:+53674456 Msa1162860:CDS
CATGAAACTGAAGACGGGTT+AGG 0.549547 7_4:-53673313 None:intergenic
GCCAACAGCAGCAAATTTGG+CGG 0.551525 7_4:-53673989 None:intergenic
AAATGTCCACAAAATGGAAG+TGG 0.559942 7_4:+53674528 Msa1162860:CDS
CATGTGATGGATTAAGAAGG+AGG 0.571412 7_4:-53673184 None:intergenic
GAGGTTAGTTGAGCATGTGA+TGG 0.579020 7_4:-53673197 None:intergenic
GTTCAGTCCATGATTAACAT+GGG 0.587414 7_4:+53674735 Msa1162860:CDS
GGAATGTACTACTTGGCAGA+AGG 0.592126 7_4:+53673893 Msa1162860:CDS
GTACTACTTGGCAGAAGGGA+CGG 0.592958 7_4:+53673898 Msa1162860:CDS
GAATGTACTACTTGGCAGAA+GGG 0.593239 7_4:+53673894 Msa1162860:CDS
GCTTGCAAAGTTGTTAACAA+TGG 0.593422 7_4:-53674685 None:intergenic
GCAATCATGAAACTGAAGAC+GGG 0.594589 7_4:-53673318 None:intergenic
AGTCCATTAATGGGAAGTCA+AGG 0.598007 7_4:+53674765 Msa1162860:CDS
AGCAATCATGAAACTGAAGA+CGG 0.599227 7_4:-53673319 None:intergenic
TGGATGTGTTGGCACCAGAT+TGG 0.602779 7_4:-53673933 None:intergenic
CCAAGTAGTACATTCCATGA+AGG 0.604615 7_4:-53673886 None:intergenic
TCAGCACAAGACACGACAGC+AGG 0.604846 7_4:-53673567 None:intergenic
ACTATTCAACTTCAGTGGCA+CGG 0.605244 7_4:+53674455 Msa1162860:CDS
GTTAATCATGGACTGAACAA+AGG 0.607469 7_4:-53674730 None:intergenic
TGGATTAGGAATGGATGTGT+TGG 0.616961 7_4:-53673944 None:intergenic
CAAAGACTATTCAACTTCAG+TGG 0.618577 7_4:+53674450 Msa1162860:CDS
CTGAAGACGGGTTAGGCTCG+CGG 0.619803 7_4:-53673306 None:intergenic
AATGTATATTTGCAGTCAGG+AGG 0.632669 7_4:+53673862 Msa1162860:intron
CCAAACAATAATTCAGCTCG+TGG 0.642755 7_4:+53673498 Msa1162860:CDS
TCACTATGGAAGAAACATTG+GGG 0.713143 7_4:-53673241 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATTAACTAAATATGAATT+AGG - chr7_4:53673633-53673652 None:intergenic 10.0%
!! TAATTAACTAAATATGAATT+AGG - chr7_4:53673633-53673652 None:intergenic 10.0%
!! AAATTCAAAATTAATGTTTG+CGG - chr7_4:53674183-53674202 None:intergenic 15.0%
!! AAATTCAAAATTAATGTTTG+CGG - chr7_4:53674183-53674202 None:intergenic 15.0%
!! TAGCAAACTAATATTTATCA+AGG + chr7_4:53673716-53673735 Msa1162860:intron 20.0%
!! TAATTAAATTGCATAACCAA+TGG - chr7_4:53673781-53673800 None:intergenic 20.0%
!! AAAAATCTTCTCAAAAATCA+AGG + chr7_4:53674609-53674628 Msa1162860:CDS 20.0%
!! TAGCAAACTAATATTTATCA+AGG + chr7_4:53673716-53673735 Msa1162860:intron 20.0%
!! TAATTAAATTGCATAACCAA+TGG - chr7_4:53673781-53673800 None:intergenic 20.0%
!! AAAAATCTTCTCAAAAATCA+AGG + chr7_4:53674609-53674628 Msa1162860:CDS 20.0%
! ATAAAAAGTAGGAGAAAACA+TGG - chr7_4:53673141-53673160 None:intergenic 25.0%
! GTGAAAATGGAATAAAAAGT+AGG - chr7_4:53673152-53673171 None:intergenic 25.0%
!!! TTCTTAATTTGTGTATTGCA+GGG + chr7_4:53673411-53673430 Msa1162860:intron 25.0%
! AATCCTTAATTGATACTGTA+CGG - chr7_4:53673752-53673771 None:intergenic 25.0%
!!! AGACTTTAATTTGAGTATGT+TGG + chr7_4:53674064-53674083 Msa1162860:intron 25.0%
! TAATTTGAGTATGTTGGATT+AGG + chr7_4:53674070-53674089 Msa1162860:intron 25.0%
!! TAACTATTTGTTGACACAAA+TGG + chr7_4:53674371-53674390 Msa1162860:intron 25.0%
! TAGTTGTTGTCGAAATTATT+TGG - chr7_4:53674585-53674604 None:intergenic 25.0%
! ATAAAAAGTAGGAGAAAACA+TGG - chr7_4:53673141-53673160 None:intergenic 25.0%
! GTGAAAATGGAATAAAAAGT+AGG - chr7_4:53673152-53673171 None:intergenic 25.0%
!!! TTCTTAATTTGTGTATTGCA+GGG + chr7_4:53673411-53673430 Msa1162860:intron 25.0%
! AATCCTTAATTGATACTGTA+CGG - chr7_4:53673752-53673771 None:intergenic 25.0%
!!! AGACTTTAATTTGAGTATGT+TGG + chr7_4:53674064-53674083 Msa1162860:intron 25.0%
! TAATTTGAGTATGTTGGATT+AGG + chr7_4:53674070-53674089 Msa1162860:intron 25.0%
!! TAACTATTTGTTGACACAAA+TGG + chr7_4:53674371-53674390 Msa1162860:intron 25.0%
! TAGTTGTTGTCGAAATTATT+TGG - chr7_4:53674585-53674604 None:intergenic 25.0%
GATTATTAGCACTGTGAAAA+TGG - chr7_4:53673165-53673184 None:intergenic 30.0%
TGATTAATGAGCTAGAGTTT+AGG + chr7_4:53673368-53673387 Msa1162860:intron 30.0%
!! GTTCTTAATTTGTGTATTGC+AGG + chr7_4:53673410-53673429 Msa1162860:intron 30.0%
! GCATCTCTTTTATTAGATCA+AGG + chr7_4:53673441-53673460 Msa1162860:CDS 30.0%
! TCTCTTTTATTAGATCAAGG+TGG + chr7_4:53673444-53673463 Msa1162860:CDS 30.0%
ATTAAGGATTATGACACCAT+TGG + chr7_4:53673762-53673781 Msa1162860:intron 30.0%
GATAATGTATATTTGCAGTC+AGG + chr7_4:53673859-53673878 Msa1162860:intron 30.0%
CATAAACTCATGCAATAACT+AGG + chr7_4:53674142-53674161 Msa1162860:intron 30.0%
CAAAATTAATGTTTGCGGAA+TGG - chr7_4:53674178-53674197 None:intergenic 30.0%
ATTTCGACAATTGTATCTGA+TGG + chr7_4:53674237-53674256 Msa1162860:intron 30.0%
CAAATGGATCAACTTGAATT+AGG + chr7_4:53674387-53674406 Msa1162860:intron 30.0%
AGATATGTTGAATTCAGTGT+TGG - chr7_4:53674492-53674511 None:intergenic 30.0%
CAACAAAAATGTCCACAAAA+TGG + chr7_4:53674522-53674541 Msa1162860:CDS 30.0%
!! CGAAATTATTTGGTGATGAA+GGG - chr7_4:53674575-53674594 None:intergenic 30.0%
!! TCGAAATTATTTGGTGATGA+AGG - chr7_4:53674576-53674595 None:intergenic 30.0%
AAATCAAGGTCTTCTTCAAA+CGG + chr7_4:53674623-53674642 Msa1162860:CDS 30.0%
CATTAGTGGAAAACAATTCT+TGG - chr7_4:53674650-53674669 None:intergenic 30.0%
! CAAGAATTGTTTTCCACTAA+TGG + chr7_4:53674648-53674667 Msa1162860:CDS 30.0%
GATATTACCCATGTTAATCA+TGG - chr7_4:53674745-53674764 None:intergenic 30.0%
GGTAATATCAGTCCATTAAT+GGG + chr7_4:53674756-53674775 Msa1162860:CDS 30.0%
GAGAAATTAGATCCAATTGT+AGG + chr7_4:53674787-53674806 Msa1162860:CDS 30.0%
TCCAATTGTAGGAAAGTTAA+TGG + chr7_4:53674798-53674817 Msa1162860:CDS 30.0%
TCCATTAACTTTCCTACAAT+TGG - chr7_4:53674802-53674821 None:intergenic 30.0%
GATTATTAGCACTGTGAAAA+TGG - chr7_4:53673165-53673184 None:intergenic 30.0%
TGATTAATGAGCTAGAGTTT+AGG + chr7_4:53673368-53673387 Msa1162860:intron 30.0%
!! GTTCTTAATTTGTGTATTGC+AGG + chr7_4:53673410-53673429 Msa1162860:intron 30.0%
! GCATCTCTTTTATTAGATCA+AGG + chr7_4:53673441-53673460 Msa1162860:CDS 30.0%
! TCTCTTTTATTAGATCAAGG+TGG + chr7_4:53673444-53673463 Msa1162860:CDS 30.0%
ATTAAGGATTATGACACCAT+TGG + chr7_4:53673762-53673781 Msa1162860:intron 30.0%
GATAATGTATATTTGCAGTC+AGG + chr7_4:53673859-53673878 Msa1162860:intron 30.0%
CATAAACTCATGCAATAACT+AGG + chr7_4:53674142-53674161 Msa1162860:intron 30.0%
CAAAATTAATGTTTGCGGAA+TGG - chr7_4:53674178-53674197 None:intergenic 30.0%
ATTTCGACAATTGTATCTGA+TGG + chr7_4:53674237-53674256 Msa1162860:intron 30.0%
CAAATGGATCAACTTGAATT+AGG + chr7_4:53674387-53674406 Msa1162860:intron 30.0%
AGATATGTTGAATTCAGTGT+TGG - chr7_4:53674492-53674511 None:intergenic 30.0%
CAACAAAAATGTCCACAAAA+TGG + chr7_4:53674522-53674541 Msa1162860:CDS 30.0%
!! CGAAATTATTTGGTGATGAA+GGG - chr7_4:53674575-53674594 None:intergenic 30.0%
!! TCGAAATTATTTGGTGATGA+AGG - chr7_4:53674576-53674595 None:intergenic 30.0%
AAATCAAGGTCTTCTTCAAA+CGG + chr7_4:53674623-53674642 Msa1162860:CDS 30.0%
CATTAGTGGAAAACAATTCT+TGG - chr7_4:53674650-53674669 None:intergenic 30.0%
! CAAGAATTGTTTTCCACTAA+TGG + chr7_4:53674648-53674667 Msa1162860:CDS 30.0%
GATATTACCCATGTTAATCA+TGG - chr7_4:53674745-53674764 None:intergenic 30.0%
GGTAATATCAGTCCATTAAT+GGG + chr7_4:53674756-53674775 Msa1162860:CDS 30.0%
GAGAAATTAGATCCAATTGT+AGG + chr7_4:53674787-53674806 Msa1162860:CDS 30.0%
TCCAATTGTAGGAAAGTTAA+TGG + chr7_4:53674798-53674817 Msa1162860:CDS 30.0%
TCCATTAACTTTCCTACAAT+TGG - chr7_4:53674802-53674821 None:intergenic 30.0%
AAAGTAGGAGAAAACATGGT+TGG - chr7_4:53673137-53673156 None:intergenic 35.0%
!!! TGTTTTGGAGTAGAATGTTG+AGG - chr7_4:53673219-53673238 None:intergenic 35.0%
TCACTATGGAAGAAACATTG+GGG - chr7_4:53673244-53673263 None:intergenic 35.0%
CTCACTATGGAAGAAACATT+GGG - chr7_4:53673245-53673264 None:intergenic 35.0%
TCTCACTATGGAAGAAACAT+TGG - chr7_4:53673246-53673265 None:intergenic 35.0%
AGCAATCATGAAACTGAAGA+CGG - chr7_4:53673322-53673341 None:intergenic 35.0%
! AGGACATGAATTTTCAACAG+AGG - chr7_4:53673550-53673569 None:intergenic 35.0%
TGTCCGTACAGTATCAATTA+AGG + chr7_4:53673746-53673765 Msa1162860:intron 35.0%
AATGTATATTTGCAGTCAGG+AGG + chr7_4:53673862-53673881 Msa1162860:intron 35.0%
AGTGATCTTGTTGCATTATC+TGG + chr7_4:53674021-53674040 Msa1162860:CDS 35.0%
GAATTAGGTGCACATACTTT+CGG + chr7_4:53674402-53674421 Msa1162860:intron 35.0%
CACTGAAGTTGAATAGTCTT+TGG - chr7_4:53674452-53674471 None:intergenic 35.0%
CAAAGACTATTCAACTTCAG+TGG + chr7_4:53674450-53674469 Msa1162860:CDS 35.0%
AAATGTCCACAAAATGGAAG+TGG + chr7_4:53674528-53674547 Msa1162860:CDS 35.0%
GCTTGCAAAGTTGTTAACAA+TGG - chr7_4:53674688-53674707 None:intergenic 35.0%
AGGCTTCAAAAAAAGCTGTT+TGG - chr7_4:53674713-53674732 None:intergenic 35.0%
! GTTAATCATGGACTGAACAA+AGG - chr7_4:53674733-53674752 None:intergenic 35.0%
TGTTCAGTCCATGATTAACA+TGG + chr7_4:53674734-53674753 Msa1162860:CDS 35.0%
GTTCAGTCCATGATTAACAT+GGG + chr7_4:53674735-53674754 Msa1162860:CDS 35.0%
GGGTAATATCAGTCCATTAA+TGG + chr7_4:53674755-53674774 Msa1162860:CDS 35.0%
AAAGTAGGAGAAAACATGGT+TGG - chr7_4:53673137-53673156 None:intergenic 35.0%
!!! TGTTTTGGAGTAGAATGTTG+AGG - chr7_4:53673219-53673238 None:intergenic 35.0%
TCACTATGGAAGAAACATTG+GGG - chr7_4:53673244-53673263 None:intergenic 35.0%
CTCACTATGGAAGAAACATT+GGG - chr7_4:53673245-53673264 None:intergenic 35.0%
TCTCACTATGGAAGAAACAT+TGG - chr7_4:53673246-53673265 None:intergenic 35.0%
AGCAATCATGAAACTGAAGA+CGG - chr7_4:53673322-53673341 None:intergenic 35.0%
! AGGACATGAATTTTCAACAG+AGG - chr7_4:53673550-53673569 None:intergenic 35.0%
TGTCCGTACAGTATCAATTA+AGG + chr7_4:53673746-53673765 Msa1162860:intron 35.0%
AATGTATATTTGCAGTCAGG+AGG + chr7_4:53673862-53673881 Msa1162860:intron 35.0%
AGTGATCTTGTTGCATTATC+TGG + chr7_4:53674021-53674040 Msa1162860:CDS 35.0%
GAATTAGGTGCACATACTTT+CGG + chr7_4:53674402-53674421 Msa1162860:intron 35.0%
CACTGAAGTTGAATAGTCTT+TGG - chr7_4:53674452-53674471 None:intergenic 35.0%
CAAAGACTATTCAACTTCAG+TGG + chr7_4:53674450-53674469 Msa1162860:CDS 35.0%
AAATGTCCACAAAATGGAAG+TGG + chr7_4:53674528-53674547 Msa1162860:CDS 35.0%
GCTTGCAAAGTTGTTAACAA+TGG - chr7_4:53674688-53674707 None:intergenic 35.0%
AGGCTTCAAAAAAAGCTGTT+TGG - chr7_4:53674713-53674732 None:intergenic 35.0%
! GTTAATCATGGACTGAACAA+AGG - chr7_4:53674733-53674752 None:intergenic 35.0%
TGTTCAGTCCATGATTAACA+TGG + chr7_4:53674734-53674753 Msa1162860:CDS 35.0%
GTTCAGTCCATGATTAACAT+GGG + chr7_4:53674735-53674754 Msa1162860:CDS 35.0%
GGGTAATATCAGTCCATTAA+TGG + chr7_4:53674755-53674774 Msa1162860:CDS 35.0%
TGGCTTCTTAGTGTCTTCTT+TGG - chr7_4:53673117-53673136 None:intergenic 40.0%
!! CATGTGATGGATTAAGAAGG+AGG - chr7_4:53673187-53673206 None:intergenic 40.0%
!! GAGCATGTGATGGATTAAGA+AGG - chr7_4:53673190-53673209 None:intergenic 40.0%
! AGAAACATTGGGGCATGTTT+TGG - chr7_4:53673234-53673253 None:intergenic 40.0%
CTGAACAGCATTTCTCACTA+TGG - chr7_4:53673258-53673277 None:intergenic 40.0%
GCAATCATGAAACTGAAGAC+GGG - chr7_4:53673321-53673340 None:intergenic 40.0%
CCACGAGCTGAATTATTGTT+TGG - chr7_4:53673501-53673520 None:intergenic 40.0%
CCAAACAATAATTCAGCTCG+TGG + chr7_4:53673498-53673517 Msa1162860:CDS 40.0%
!! CGTGTCTTGTGCTGATATTT+TGG + chr7_4:53673575-53673594 Msa1162860:CDS 40.0%
TGCTGAAGCTTCTGTATCTT+TGG + chr7_4:53673605-53673624 Msa1162860:CDS 40.0%
TTAGCTAGATGTGTCAAAGC+AGG - chr7_4:53673807-53673826 None:intergenic 40.0%
CCAAGTAGTACATTCCATGA+AGG - chr7_4:53673889-53673908 None:intergenic 40.0%
CCTTCATGGAATGTACTACT+TGG + chr7_4:53673886-53673905 Msa1162860:CDS 40.0%
GAATGTACTACTTGGCAGAA+GGG + chr7_4:53673894-53673913 Msa1162860:CDS 40.0%
! TGGATTAGGAATGGATGTGT+TGG - chr7_4:53673947-53673966 None:intergenic 40.0%
! GCTTTCAGTTGGATTAGGAA+TGG - chr7_4:53673956-53673975 None:intergenic 40.0%
GCTAAGCTTTCAGTTGGATT+AGG - chr7_4:53673961-53673980 None:intergenic 40.0%
! ACATTGGCTAAGCTTTCAGT+TGG - chr7_4:53673967-53673986 None:intergenic 40.0%
TAAGCCAACAGCAGCAAATT+TGG - chr7_4:53673995-53674014 None:intergenic 40.0%
ACTATTCAACTTCAGTGGCA+CGG + chr7_4:53674455-53674474 Msa1162860:CDS 40.0%
! GTTGAATTCAGTGTTGGATC+AGG - chr7_4:53674486-53674505 None:intergenic 40.0%
! GTGTTACCACTTCCATTTTG+TGG - chr7_4:53674537-53674556 None:intergenic 40.0%
AGTCCATTAATGGGAAGTCA+AGG + chr7_4:53674765-53674784 Msa1162860:CDS 40.0%
TCTCCTTGACTTCCCATTAA+TGG - chr7_4:53674771-53674790 None:intergenic 40.0%
TGGCTTCTTAGTGTCTTCTT+TGG - chr7_4:53673117-53673136 None:intergenic 40.0%
!! CATGTGATGGATTAAGAAGG+AGG - chr7_4:53673187-53673206 None:intergenic 40.0%
!! GAGCATGTGATGGATTAAGA+AGG - chr7_4:53673190-53673209 None:intergenic 40.0%
! AGAAACATTGGGGCATGTTT+TGG - chr7_4:53673234-53673253 None:intergenic 40.0%
CTGAACAGCATTTCTCACTA+TGG - chr7_4:53673258-53673277 None:intergenic 40.0%
GCAATCATGAAACTGAAGAC+GGG - chr7_4:53673321-53673340 None:intergenic 40.0%
CCACGAGCTGAATTATTGTT+TGG - chr7_4:53673501-53673520 None:intergenic 40.0%
CCAAACAATAATTCAGCTCG+TGG + chr7_4:53673498-53673517 Msa1162860:CDS 40.0%
!! CGTGTCTTGTGCTGATATTT+TGG + chr7_4:53673575-53673594 Msa1162860:CDS 40.0%
TGCTGAAGCTTCTGTATCTT+TGG + chr7_4:53673605-53673624 Msa1162860:CDS 40.0%
TTAGCTAGATGTGTCAAAGC+AGG - chr7_4:53673807-53673826 None:intergenic 40.0%
CCAAGTAGTACATTCCATGA+AGG - chr7_4:53673889-53673908 None:intergenic 40.0%
CCTTCATGGAATGTACTACT+TGG + chr7_4:53673886-53673905 Msa1162860:CDS 40.0%
GAATGTACTACTTGGCAGAA+GGG + chr7_4:53673894-53673913 Msa1162860:CDS 40.0%
! TGGATTAGGAATGGATGTGT+TGG - chr7_4:53673947-53673966 None:intergenic 40.0%
! GCTTTCAGTTGGATTAGGAA+TGG - chr7_4:53673956-53673975 None:intergenic 40.0%
GCTAAGCTTTCAGTTGGATT+AGG - chr7_4:53673961-53673980 None:intergenic 40.0%
! ACATTGGCTAAGCTTTCAGT+TGG - chr7_4:53673967-53673986 None:intergenic 40.0%
TAAGCCAACAGCAGCAAATT+TGG - chr7_4:53673995-53674014 None:intergenic 40.0%
ACTATTCAACTTCAGTGGCA+CGG + chr7_4:53674455-53674474 Msa1162860:CDS 40.0%
! GTTGAATTCAGTGTTGGATC+AGG - chr7_4:53674486-53674505 None:intergenic 40.0%
! GTGTTACCACTTCCATTTTG+TGG - chr7_4:53674537-53674556 None:intergenic 40.0%
AGTCCATTAATGGGAAGTCA+AGG + chr7_4:53674765-53674784 Msa1162860:CDS 40.0%
TCTCCTTGACTTCCCATTAA+TGG - chr7_4:53674771-53674790 None:intergenic 40.0%
! GAGGTTAGTTGAGCATGTGA+TGG - chr7_4:53673200-53673219 None:intergenic 45.0%
! CATGAAACTGAAGACGGGTT+AGG - chr7_4:53673316-53673335 None:intergenic 45.0%
GGAATGTACTACTTGGCAGA+AGG + chr7_4:53673893-53673912 Msa1162860:CDS 45.0%
GGTCTGATTGCAAACCAATC+TGG + chr7_4:53673919-53673938 Msa1162860:CDS 45.0%
AGCAAATTTGGCGGTGACAT+TGG - chr7_4:53673983-53674002 None:intergenic 45.0%
CTATTCAACTTCAGTGGCAC+GGG + chr7_4:53674456-53674475 Msa1162860:CDS 45.0%
GATTGTAGCAGCACCATTAG+TGG - chr7_4:53674664-53674683 None:intergenic 45.0%
! GAGGTTAGTTGAGCATGTGA+TGG - chr7_4:53673200-53673219 None:intergenic 45.0%
! CATGAAACTGAAGACGGGTT+AGG - chr7_4:53673316-53673335 None:intergenic 45.0%
GGAATGTACTACTTGGCAGA+AGG + chr7_4:53673893-53673912 Msa1162860:CDS 45.0%
GGTCTGATTGCAAACCAATC+TGG + chr7_4:53673919-53673938 Msa1162860:CDS 45.0%
AGCAAATTTGGCGGTGACAT+TGG - chr7_4:53673983-53674002 None:intergenic 45.0%
CTATTCAACTTCAGTGGCAC+GGG + chr7_4:53674456-53674475 Msa1162860:CDS 45.0%
GATTGTAGCAGCACCATTAG+TGG - chr7_4:53674664-53674683 None:intergenic 45.0%
GTACTACTTGGCAGAAGGGA+CGG + chr7_4:53673898-53673917 Msa1162860:CDS 50.0%
! TGGATGTGTTGGCACCAGAT+TGG - chr7_4:53673936-53673955 None:intergenic 50.0%
!! ACCGCCAAATTTGCTGCTGT+TGG + chr7_4:53673988-53674007 Msa1162860:CDS 50.0%
GCCAACAGCAGCAAATTTGG+CGG - chr7_4:53673992-53674011 None:intergenic 50.0%
GTACTACTTGGCAGAAGGGA+CGG + chr7_4:53673898-53673917 Msa1162860:CDS 50.0%
! TGGATGTGTTGGCACCAGAT+TGG - chr7_4:53673936-53673955 None:intergenic 50.0%
!! ACCGCCAAATTTGCTGCTGT+TGG + chr7_4:53673988-53674007 Msa1162860:CDS 50.0%
GCCAACAGCAGCAAATTTGG+CGG - chr7_4:53673992-53674011 None:intergenic 50.0%
GTTAGGCTCGCGGTAATACG+AGG - chr7_4:53673299-53673318 None:intergenic 55.0%
TCAGCACAAGACACGACAGC+AGG - chr7_4:53673570-53673589 None:intergenic 55.0%
TGCAGTCAGGAGGTCCTTCA+TGG + chr7_4:53673872-53673891 Msa1162860:intron 55.0%
GTTAGGCTCGCGGTAATACG+AGG - chr7_4:53673299-53673318 None:intergenic 55.0%
TCAGCACAAGACACGACAGC+AGG - chr7_4:53673570-53673589 None:intergenic 55.0%
TGCAGTCAGGAGGTCCTTCA+TGG + chr7_4:53673872-53673891 Msa1162860:intron 55.0%
!! CTGAAGACGGGTTAGGCTCG+CGG - chr7_4:53673309-53673328 None:intergenic 60.0%
!! CTGAAGACGGGTTAGGCTCG+CGG - chr7_4:53673309-53673328 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 53673104 53674827 53673104 ID=Msa1162860;Name=Msa1162860
chr7_4 mRNA 53673104 53674827 53673104 ID=Msa1162860-mRNA-1;Parent=Msa1162860;Name=Msa1162860-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|1|0.25|1|1|1|4|0|341
chr7_4 exon 53673104 53673349 53673104 ID=Msa1162860-mRNA-1:exon:15527;Parent=Msa1162860-mRNA-1
chr7_4 exon 53673432 53673626 53673432 ID=Msa1162860-mRNA-1:exon:15528;Parent=Msa1162860-mRNA-1
chr7_4 exon 53673877 53674042 53673877 ID=Msa1162860-mRNA-1:exon:15529;Parent=Msa1162860-mRNA-1
chr7_4 exon 53674409 53674827 53674409 ID=Msa1162860-mRNA-1:exon:15530;Parent=Msa1162860-mRNA-1
chr7_4 CDS 53673104 53673349 53673104 ID=Msa1162860-mRNA-1:cds;Parent=Msa1162860-mRNA-1
chr7_4 CDS 53673432 53673626 53673432 ID=Msa1162860-mRNA-1:cds;Parent=Msa1162860-mRNA-1
chr7_4 CDS 53673877 53674042 53673877 ID=Msa1162860-mRNA-1:cds;Parent=Msa1162860-mRNA-1
chr7_4 CDS 53674409 53674827 53674409 ID=Msa1162860-mRNA-1:cds;Parent=Msa1162860-mRNA-1
Gene Sequence

>Msa1162860

AAATCAAACTCCAAAGAAGACACTAAGAAGCCAACCATGTTTTCTCCTACTTTTTATTCCATTTTCACAGTGCTAATAATCCTCCTTCTTAATCCATCACATGCTCAACTAACCTCAACATTCTACTCCAAAACATGCCCCAATGTTTCTTCCATAGTGAGAAATGCTGTTCAGCAAGCTCTGCAAAATGATCCTCGTATTACCGCGAGCCTAACCCGTCTTCAGTTTCATGATTGCTTTGTTAATGGATGTGATGCATCTCTTTTATTAGATCAAGGTGGAAACATAACACTAAGTGAGAAAAATGCTGCTCCAAACAATAATTCAGCTCGTGGCTTTGATGTAGTTGACAAAATCAAAACCTCTGTTGAAAATTCATGTCCTGCTGTCGTGTCTTGTGCTGATATTTTGGTTCTTGCTGCTGAAGCTTCTGTATCTTTGTCAGGAGGTCCTTCATGGAATGTACTACTTGGCAGAAGGGACGGTCTGATTGCAAACCAATCTGGTGCCAACACATCCATTCCTAATCCAACTGAAAGCTTAGCCAATGTCACCGCCAAATTTGCTGCTGTTGGCTTAAACACAAGTGATCTTGTTGCATTATCTGGTGCACATACTTTCGGTCGTGCACAATGTAGATTTTTCAACCAAAGACTATTCAACTTCAGTGGCACGGGCAAGCCTGATCCAACACTGAATTCAACATATCTAGCTACTCTACAACAAAAATGTCCACAAAATGGAAGTGGTAACACACTAAACAATCTTGACCCTTCATCACCAAATAATTTCGACAACAACTACTTCAAAAATCTTCTCAAAAATCAAGGTCTTCTTCAAACGGACCAAGAATTGTTTTCCACTAATGGTGCTGCTACAATCTCCATTGTTAACAACTTTGCAAGCAACCAAACAGCTTTTTTTGAAGCCTTTGTTCAGTCCATGATTAACATGGGTAATATCAGTCCATTAATGGGAAGTCAAGGAGAAATTAGATCCAATTGTAGGAAAGTTAATGGAAGTTGA
Protein sequence

>Msa1162860

KSNSKEDTKKPTMFSPTFYSIFTVLIILLLNPSHAQLTSTFYSKTCPNVSSIVRNAVQQALQNDPRITASLTRLQFHDCFVNGCDASLLLDQGGNITLSEKNAAPNNNSARGFDVVDKIKTSVENSCPAVVSCADILVLAAEASVSLSGGPSWNVLLGRRDGLIANQSGANTSIPNPTESLANVTAKFAAVGLNTSDLVALSGAHTFGRAQCRFFNQRLFNFSGTGKPDPTLNSTYLATLQQKCPQNGSGNTLNNLDPSSPNNFDNNYFKNLLKNQGLLQTDQELFSTNGAATISIVNNFASNQTAFFEAFVQSMINMGNISPLMGSQGEIRSNCRKVNGS*