AlfalfaGEDB | Msa1075380

M. sativa cultivar zhongmu-4 / Msa1075380

KEGG: K00430
GO: GO:0000003 GO:0002215 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005794 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0009791 GO:0009908 GO:0012505 GO:0016020 GO:0022414 GO:0031090 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0048367 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0061458 GO:0090567 GO:0098588 GO:0098805
PFAM: PF00141.26

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1075380	AES81493.1	94.706	340	18	0	6	345	34	373	0.0	655

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1075380	sp\|Q9LEH3\|PER15_IPOBA	72.393	326	88	1	18	343	4	327	8.01e-171	481

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1075380	G7KVF1	94.706	340	18	0	6	345	34	373	0.0	655

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0618050	Msa1075380	0.844024	9.765556e-59	-8.615850e-47
Msa0618600	Msa1075380	0.856211	3.750231e-62	-8.615850e-47
Msa0643240	Msa1075380	0.821546	3.811377e-53	-8.615850e-47
Msa0657380	Msa1075380	0.855425	6.364346e-62	-8.615850e-47
Msa0682920	Msa1075380	0.856407	3.286206e-62	-8.615850e-47
Msa0708510	Msa1075380	0.893612	5.343609e-75	-8.615850e-47
Msa1035290	Msa1075380	0.914748	1.331547e-84	-8.615850e-47
Msa1075380	Msa1116460	0.992269	2.742634e-192	-8.615850e-47
Msa1075380	Msa1162860	0.860069	2.671142e-63	-8.615850e-47
Msa1075380	Msa1199250	0.878476	2.722365e-69	-8.615850e-47
Msa1075380	Msa1199260	0.845240	4.593889e-59	-8.615850e-47
Msa1075380	Msa1252480	0.860323	2.237507e-63	-8.615850e-47
Msa1075380	Msa1293220	0.814802	1.279728e-51	-8.615850e-47
Msa1075380	Msa1421310	0.866822	2.152807e-65	-8.615850e-47
Msa0250450	Msa1075380	0.875785	2.343726e-68	-8.615850e-47
Msa0263440	Msa1075380	0.890345	1.071260e-73	-8.615850e-47
Msa0289060	Msa1075380	0.826675	2.382170e-54	-8.615850e-47
Msa0289100	Msa1075380	0.821272	4.410587e-53	-8.615850e-47
Msa0301030	Msa1075380	0.909688	4.320678e-82	-8.615850e-47
Msa0314220	Msa1075380	0.832950	7.056300e-56	-8.615850e-47
Msa0327020	Msa1075380	0.841837	3.730290e-58	-8.615850e-47
Msa0338580	Msa1075380	0.867863	1.000293e-65	-8.615850e-47
Msa0485970	Msa1075380	0.854228	1.415281e-61	-8.615850e-47
Msa0547390	Msa1075380	0.851394	9.130014e-61	-8.615850e-47
Msa0564950	Msa1075380	0.840442	8.675417e-58	-8.615850e-47
Msa0565260	Msa1075380	0.857732	1.335487e-62	-8.615850e-47
Msa0580580	Msa1075380	0.842846	2.014683e-58	-8.615850e-47
Msa0602110	Msa1075380	0.825359	4.893777e-54	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1075380	MtrunA17_Chr7g0258811	94.706	340	18	0	6	345	34	373	0.0	655
Msa1075380	MtrunA17_Chr1g0175561	75.988	329	78	1	17	345	1	328	0.0	510
Msa1075380	MtrunA17_Chr2g0292211	61.562	320	118	2	24	343	27	341	7.06e-137	393
Msa1075380	MtrunA17_Chr2g0292251	61.564	307	117	1	37	343	24	329	8.43e-133	382
Msa1075380	MtrunA17_Chr2g0292241	59.935	307	122	1	37	343	25	330	2.40e-132	381
Msa1075380	MtrunA17_Chr2g0292271	59.006	322	128	2	26	344	11	331	1.07e-130	377
Msa1075380	MtrunA17_Chr2g0292181	57.012	328	138	2	18	343	13	339	6.69e-130	375
Msa1075380	MtrunA17_Chr2g0291751	58.204	323	134	1	21	343	9	330	5.00e-128	370
Msa1075380	MtrunA17_Chr2g0292261	60.065	308	122	1	37	344	25	331	4.13e-127	368
Msa1075380	MtrunA17_Chr2g0292091	58.147	313	130	1	32	344	15	326	1.60e-126	366
Msa1075380	MtrunA17_Chr2g0292151	58.632	307	126	1	37	343	25	330	4.57e-126	365
Msa1075380	MtrunA17_Chr4g0070951	55.793	328	140	2	18	343	5	329	3.65e-125	362
Msa1075380	MtrunA17_Chr2g0292111	57.655	307	129	1	37	343	25	330	1.64e-124	361
Msa1075380	MtrunA17_Chr2g0299691	55.247	324	136	3	26	343	38	358	2.95e-122	356
Msa1075380	MtrunA17_Chr2g0292291	55.927	329	141	3	18	343	5	332	1.52e-121	354
Msa1075380	MtrunA17_Chr2g0292101	56.869	313	134	1	32	344	16	327	1.78e-120	351
Msa1075380	MtrunA17_Chr3g0129051	54.518	332	132	6	14	343	8	322	1.22e-118	345
Msa1075380	MtrunA17_Chr3g0129061	55.763	321	130	5	25	343	12	322	1.12e-114	335
Msa1075380	MtrunA17_Chr5g0404721	53.465	303	139	2	41	343	30	330	2.99e-114	334
Msa1075380	MtrunA17_Chr3g0129041	55.140	321	132	5	25	343	12	322	1.94e-111	327
Msa1075380	MtrunA17_Chr8g0372601	52.475	303	142	2	41	343	30	330	2.76e-110	324
Msa1075380	MtrunA17_Chr5g0402571	52.500	320	147	4	25	343	11	326	1.35e-109	322
Msa1075380	MtrunA17_Chr3g0106921	51.220	328	146	7	19	343	4	320	3.03e-108	319
Msa1075380	MtrunA17_Chr5g0402581	52.215	316	145	5	29	343	16	326	2.10e-106	314
Msa1075380	MtrunA17_Chr3g0114451	49.538	325	147	4	26	343	4	318	5.18e-106	313
Msa1075380	MtrunA17_Chr5g0438021	49.062	320	151	5	26	343	16	325	9.65e-106	313
Msa1075380	MtrunA17_Chr2g0320071	49.846	325	151	5	21	343	3	317	1.20e-105	312
Msa1075380	MtrunA17_Chr2g0320061	49.231	325	154	5	21	343	3	318	1.34e-102	304
Msa1075380	MtrunA17_Chr5g0432441	48.607	323	150	6	26	343	15	326	4.59e-102	303
Msa1075380	MtrunA17_Chr2g0320031	47.678	323	158	4	22	343	7	319	5.12e-102	303
Msa1075380	MtrunA17_Chr4g0013171	47.734	331	159	6	17	343	1	321	6.51e-102	303
Msa1075380	MtrunA17_Chr2g0320101	50.000	326	149	6	21	343	3	317	8.82e-102	302
Msa1075380	MtrunA17_Chr4g0043391	48.598	321	154	4	26	343	12	324	1.59e-101	302
Msa1075380	MtrunA17_Chr2g0320051	49.837	307	145	3	37	343	21	318	4.09e-101	300
Msa1075380	MtrunA17_Chr4g0038171	48.916	323	150	5	26	343	9	321	2.78e-100	298
Msa1075380	MtrunA17_Chr7g0244461	45.768	319	163	3	25	343	4	312	3.58e-99	295
Msa1075380	MtrunA17_Chr2g0320091	48.750	320	152	5	26	343	9	318	5.90e-99	295
Msa1075380	MtrunA17_Chr4g0038161	47.706	327	156	5	23	343	3	320	3.15e-98	293
Msa1075380	MtrunA17_Chr4g0038151	48.447	322	153	5	26	343	9	321	4.97e-98	293
Msa1075380	MtrunA17_Chr1g0155611	48.185	303	156	1	41	343	46	347	7.05e-97	291
Msa1075380	MtrunA17_Chr4g0013201	46.372	317	160	3	27	343	32	338	4.59e-96	288
Msa1075380	MtrunA17_Chr5g0400331	48.534	307	153	3	41	343	26	331	2.30e-95	286
Msa1075380	MtrunA17_Chr5g0432341	45.679	324	164	5	23	343	7	321	3.73e-95	285
Msa1075380	MtrunA17_Chr5g0432351	45.370	324	165	5	23	343	7	321	5.57e-95	285
Msa1075380	MtrunA17_Chr1g0213061	44.753	324	166	6	22	343	9	321	6.13e-94	283
Msa1075380	MtrunA17_Chr7g0244451	47.152	316	157	3	28	343	11	316	8.18e-94	282
Msa1075380	MtrunA17_Chr5g0432331	45.483	321	163	5	26	343	41	352	1.94e-93	282
Msa1075380	MtrunA17_Chr4g0013821	43.963	323	170	5	27	344	9	325	3.60e-93	281
Msa1075380	MtrunA17_Chr4g0013721	46.254	307	159	4	37	343	96	396	5.55e-93	283
Msa1075380	MtrunA17_Chr4g0013181	48.173	301	144	5	45	343	63	353	8.03e-93	281
Msa1075380	MtrunA17_Chr4g0068621	46.205	303	159	3	41	343	38	336	3.54e-92	278
Msa1075380	MtrunA17_Chr3g0106901	45.345	333	170	5	12	343	2	323	6.35e-91	275
Msa1075380	MtrunA17_Chr3g0107881	44.308	325	170	4	22	343	8	324	1.86e-89	271
Msa1075380	MtrunA17_Chr4g0024121	41.463	328	187	4	17	343	3	326	1.69e-88	269
Msa1075380	MtrunA17_Chr2g0322861	44.548	321	170	6	26	343	71	386	2.51e-88	270
Msa1075380	MtrunA17_Chr3g0128061	42.462	325	177	4	23	343	8	326	1.05e-87	266
Msa1075380	MtrunA17_Chr4g0063671	45.062	324	162	7	26	343	7	320	3.63e-87	265
Msa1075380	MtrunA17_Chr4g0013191	44.551	312	165	4	32	343	37	340	1.44e-85	261
Msa1075380	MtrunA17_Chr7g0268501	43.344	323	175	6	22	343	5	320	7.07e-85	259
Msa1075380	MtrunA17_Chr7g0268521	43.344	323	175	6	22	343	5	320	7.07e-85	259
Msa1075380	MtrunA17_Chr7g0254201	43.934	305	161	6	39	343	18	312	1.03e-84	258
Msa1075380	MtrunA17_Chr6g0477071	44.300	307	153	8	39	343	52	342	1.48e-83	256
Msa1075380	MtrunA17_Chr2g0279041	42.943	333	176	7	17	343	1	325	3.17e-82	253
Msa1075380	MtrunA17_Chr5g0405991	43.218	317	168	9	28	343	11	316	4.49e-82	252
Msa1075380	MtrunA17_Chr6g0460711	43.438	320	171	8	25	343	4	314	2.53e-81	250
Msa1075380	MtrunA17_Chr1g0204011	41.358	324	179	7	21	343	9	322	4.25e-80	247
Msa1075380	MtrunA17_Chr8g0371381	43.750	304	160	8	41	343	26	319	1.27e-79	246
Msa1075380	MtrunA17_Chr1g0148021	42.724	323	177	5	26	343	9	328	1.40e-79	246
Msa1075380	MtrunA17_Chr1g0188431	40.557	323	178	6	21	343	19	327	4.00e-79	244
Msa1075380	MtrunA17_Chr7g0224371	40.867	323	179	5	23	344	12	323	4.69e-79	244
Msa1075380	MtrunA17_Chr2g0329641	41.100	309	169	6	40	343	35	335	6.96e-79	244
Msa1075380	MtrunA17_Chr5g0421411	42.160	287	160	6	61	343	1	285	1.93e-76	236
Msa1075380	MtrunA17_Chr7g0225221	41.195	318	176	5	28	343	12	320	1.59e-75	235
Msa1075380	MtrunA17_Chr1g0157051	41.250	320	178	7	21	339	4	314	2.18e-75	235
Msa1075380	MtrunA17_Chr4g0072091	42.857	308	165	4	40	343	23	323	5.18e-75	234
Msa1075380	MtrunA17_Chr4g0046131	38.824	340	186	7	19	339	6	342	5.43e-75	235
Msa1075380	MtrunA17_Chr4g0076211	41.806	299	162	6	46	343	46	333	1.19e-74	233
Msa1075380	MtrunA17_Chr2g0296621	41.503	306	164	9	41	344	50	342	1.39e-74	234
Msa1075380	MtrunA17_Chr6g0467161	39.583	336	180	8	18	343	14	336	3.37e-74	233
Msa1075380	MtrunA17_Chr5g0432401	41.538	325	135	7	25	342	9	285	4.28e-74	230
Msa1075380	MtrunA17_Chr2g0316481	38.739	333	170	6	41	342	76	405	2.55e-73	232
Msa1075380	MtrunA17_Chr1g0194151	39.940	333	186	7	22	343	4	333	6.94e-73	229
Msa1075380	MtrunA17_Chr2g0316791	38.988	336	165	7	41	342	76	405	1.01e-72	231
Msa1075380	MtrunA17_Chr2g0316831	38.739	333	170	6	41	342	112	441	5.22e-72	230
Msa1075380	MtrunA17_Chr5g0401431	39.062	320	187	5	24	339	10	325	5.35e-72	226
Msa1075380	MtrunA17_Chr2g0311251	39.039	333	168	7	41	342	11	339	3.17e-71	225
Msa1075380	MtrunA17_Chr7g0254231	40.196	306	168	7	39	343	20	311	4.06e-71	224
Msa1075380	MtrunA17_Chr1g0194271	39.118	340	186	8	22	343	4	340	5.86e-71	224
Msa1075380	MtrunA17_Chr2g0316191	38.024	334	172	6	41	342	76	406	1.97e-70	225
Msa1075380	MtrunA17_Chr2g0292281	55.714	210	83	2	134	343	17	216	2.59e-70	219
Msa1075380	MtrunA17_Chr4g0053871	40.810	321	175	7	25	339	9	320	2.72e-70	222
Msa1075380	MtrunA17_Chr1g0197411	36.890	328	203	3	18	343	5	330	7.90e-70	221
Msa1075380	MtrunA17_Chr1g0164891	39.604	303	176	5	45	343	93	392	3.66e-69	221
Msa1075380	MtrunA17_Chr6g0467121	39.205	352	184	9	8	344	28	364	3.37e-68	218
Msa1075380	MtrunA17_Chr2g0278671	39.365	315	178	7	34	343	17	323	9.26e-68	215
Msa1075380	MtrunA17_Chr2g0279061	45.627	263	131	5	85	343	12	266	3.48e-67	212
Msa1075380	MtrunA17_Chr8g0364291	37.695	321	195	4	25	343	7	324	2.78e-66	212
Msa1075380	MtrunA17_Chr2g0311241	35.185	378	167	8	41	345	60	432	4.09e-66	214
Msa1075380	MtrunA17_Chr5g0413051	36.538	312	190	5	37	343	69	377	5.52e-64	207
Msa1075380	MtrunA17_Chr3g0136751	37.888	322	189	5	25	343	9	322	8.57e-62	200
Msa1075380	MtrunA17_Chr1g0181511	36.570	309	184	6	39	344	25	324	3.64e-61	198
Msa1075380	MtrunA17_Chr6g0467251	38.762	307	172	8	36	339	31	324	1.13e-59	195
Msa1075380	MtrunA17_Chr6g0451571	35.692	325	199	6	22	343	17	334	1.41e-59	194
Msa1075380	MtrunA17_Chr1g0181431	35.599	309	187	6	39	344	25	324	9.57e-58	189
Msa1075380	MtrunA17_Chr1g0181481	35.922	309	186	6	39	344	25	324	4.97e-57	188
Msa1075380	MtrunA17_Chr4g0075241	35.082	305	192	4	40	343	28	327	1.48e-56	187
Msa1075380	MtrunA17_Chr4g0074851	34.653	303	184	6	41	339	32	324	6.36e-55	182
Msa1075380	MtrunA17_Chr3g0114461	46.073	191	95	2	153	343	10	192	2.46e-53	174
Msa1075380	MtrunA17_Chr2g0316811	36.972	284	132	5	41	278	50	332	1.19e-52	177
Msa1075380	MtrunA17_Chr4g0004591	30.745	322	160	4	41	342	77	355	2.16e-48	166
Msa1075380	MtrunA17_Chr2g0316141	34.722	288	135	8	87	342	11	277	7.05e-46	157
Msa1075380	MtrunA17_Chr2g0316181	34.722	288	135	8	87	342	11	277	7.05e-46	157
Msa1075380	MtrunA17_Chr3g0114491	60.909	110	42	1	40	149	17	125	1.31e-38	134
Msa1075380	MtrunA17_Chr1g0181501	33.846	195	118	5	153	344	4	190	5.01e-29	110
Msa1075380	MtrunA17_Chr2g0316771	30.168	179	91	4	192	339	7	182	6.87e-23	94.4
Msa1075380	MtrunA17_Chr5g0432321	38.710	124	68	2	163	286	17	132	8.29e-22	89.7
Msa1075380	MtrunA17_Chr3g0104101	36.620	142	85	5	206	343	9	149	8.71e-21	87.4
Msa1075380	MtrunA17_Chr7g0254181	42.424	99	54	1	110	208	27	122	1.38e-19	84.3
Msa1075380	MtrunA17_Chr6g0468731	56.944	72	26	2	80	151	22	88	1.20e-18	79.7
Msa1075380	MtrunA17_Chr1g0181491	39.823	113	65	3	39	151	10	119	2.35e-18	80.9
Msa1075380	MtrunA17_Chr5g0432361	40.860	93	54	1	250	342	17	108	1.07e-17	77.8
Msa1075380	MtrunA17_Chr4g0013811	40.541	74	44	0	152	225	5	78	8.78e-14	65.9
Msa1075380	MtrunA17_Chr7g0254171	34.783	138	82	4	87	221	4	136	1.14e-13	67.4
Msa1075380	MtrunA17_Chr1g0196191	52.632	76	32	3	75	150	21	92	1.89e-13	67.4
Msa1075380	MtrunA17_Chr7g0268491	45.238	84	43	2	260	343	17	97	2.02e-13	65.5
Msa1075380	MtrunA17_Chr3g0137751	26.667	255	136	8	73	324	106	312	2.15e-13	70.1
Msa1075380	MtrunA17_Chr3g0124821	27.500	200	111	7	135	325	180	354	8.78e-13	68.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1075380	AT5G06720.1	70.303	330	93	2	20	345	7	335	3.68e-167	469
Msa1075380	AT5G06730.1	68.111	323	102	1	22	344	14	335	6.89e-158	447
Msa1075380	AT2G38380.1	55.723	332	140	5	18	343	3	333	2.17e-124	361
Msa1075380	AT5G19880.1	55.140	321	140	3	25	343	11	329	3.28e-124	360
Msa1075380	AT2G38390.1	55.519	308	135	2	37	343	27	333	1.19e-122	357
Msa1075380	AT4G08780.1	55.340	309	135	3	37	343	20	327	3.49e-122	355
Msa1075380	AT3G32980.1	55.255	333	141	5	18	343	3	334	2.34e-121	353
Msa1075380	AT4G08770.1	55.340	309	135	3	37	343	20	327	3.37e-120	350
Msa1075380	AT3G49110.1	54.462	325	140	4	26	343	13	336	4.24e-118	345
Msa1075380	AT3G49120.1	54.154	325	144	4	23	343	12	335	5.50e-118	345
Msa1075380	AT5G19890.1	53.453	333	144	5	13	343	4	327	1.62e-117	343
Msa1075380	AT5G66390.1	52.769	307	143	2	37	343	29	333	2.11e-115	338
Msa1075380	AT2G18150.1	54.153	301	136	2	45	345	40	338	3.92e-114	335
Msa1075380	AT4G36430.1	53.443	305	140	2	39	343	28	330	1.05e-113	333
Msa1075380	AT2G18140.1	53.488	301	138	2	45	345	39	337	2.08e-113	333
Msa1075380	AT3G50990.1	51.466	307	147	2	37	343	37	341	1.52e-110	326
Msa1075380	AT5G05340.1	51.948	308	136	5	38	343	27	324	3.45e-106	314
Msa1075380	AT1G44970.1	50.980	306	149	1	38	343	42	346	7.75e-103	306
Msa1075380	AT1G49570.1	49.669	302	146	4	41	339	48	346	1.50e-99	298
Msa1075380	AT2G35380.1	51.140	307	145	4	41	343	30	335	1.48e-98	295
Msa1075380	AT5G58390.1	49.379	322	150	6	25	343	5	316	2.62e-97	291
Msa1075380	AT1G14550.1	45.652	322	166	4	23	343	8	321	3.15e-96	288
Msa1075380	AT5G58400.1	47.988	323	153	7	26	343	13	325	7.19e-96	288
Msa1075380	AT1G14540.1	45.652	322	165	4	24	343	2	315	7.09e-93	280
Msa1075380	AT5G17820.1	44.304	316	163	5	28	343	11	313	1.10e-91	276
Msa1075380	AT2G22420.1	45.215	303	160	4	41	343	23	319	2.59e-91	276
Msa1075380	AT5G17820.2	44.304	316	163	5	28	343	64	366	1.54e-90	276
Msa1075380	AT1G68850.1	42.900	331	179	9	21	343	7	335	1.47e-89	272
Msa1075380	AT3G03670.1	45.938	320	167	4	26	343	6	321	1.76e-89	271
Msa1075380	AT4G16270.1	45.667	300	157	5	45	343	54	348	2.63e-87	267
Msa1075380	AT5G64120.1	47.157	299	149	6	45	343	39	328	8.64e-87	265
Msa1075380	AT3G21770.1	44.194	310	164	6	33	339	21	324	3.38e-86	263
Msa1075380	AT2G41480.1	43.425	327	171	7	23	343	10	328	6.26e-85	260
Msa1075380	AT2G18980.1	43.692	325	171	5	23	343	7	323	3.31e-84	258
Msa1075380	AT5G39580.1	47.335	319	156	9	28	343	10	319	7.03e-84	257
Msa1075380	AT4G11290.1	42.991	321	178	4	25	343	9	326	1.22e-83	256
Msa1075380	AT1G05260.1	42.415	323	175	7	26	343	9	325	2.42e-83	256
Msa1075380	AT4G30170.1	43.366	309	163	5	39	343	25	325	2.81e-81	250
Msa1075380	AT3G01190.1	41.693	319	177	6	25	343	12	321	1.67e-80	248
Msa1075380	AT4G25980.1	41.875	320	174	5	29	343	14	326	6.35e-80	247
Msa1075380	AT5G15180.1	39.319	323	187	6	25	343	12	329	7.67e-80	247
Msa1075380	AT1G77100.1	42.769	325	171	6	24	343	5	319	4.06e-78	242
Msa1075380	AT4G37530.1	43.450	313	171	4	34	343	20	329	4.15e-78	243
Msa1075380	AT5G42180.1	41.693	319	175	8	25	342	8	316	5.88e-78	242
Msa1075380	AT5G14130.1	39.763	337	192	5	8	343	4	330	6.18e-78	242
Msa1075380	AT5G14130.2	39.181	342	197	5	3	343	40	371	1.05e-77	243
Msa1075380	AT5G51890.1	39.628	323	185	7	22	343	9	322	1.78e-77	241
Msa1075380	AT3G49960.1	42.812	320	175	6	28	343	14	329	2.10e-76	238
Msa1075380	AT2G39040.1	41.987	312	171	6	38	343	43	350	2.80e-75	236
Msa1075380	AT1G71695.1	42.951	305	163	6	41	343	44	339	1.44e-74	234
Msa1075380	AT4G37520.1	41.447	304	172	4	39	339	25	325	2.72e-74	233
Msa1075380	AT1G05240.1	40.134	299	168	5	45	339	30	321	3.02e-74	233
Msa1075380	AT1G05250.1	40.134	299	168	5	45	339	30	321	3.02e-74	233
Msa1075380	AT5G64110.1	41.641	329	175	7	23	343	11	330	4.75e-74	232
Msa1075380	AT4G33420.1	41.748	309	165	7	36	343	31	325	1.45e-73	231
Msa1075380	AT2G43480.1	39.185	319	178	8	32	343	26	335	2.17e-73	231
Msa1075380	AT5G64100.1	42.333	300	163	6	45	343	41	331	3.03e-73	230
Msa1075380	AT2G35380.2	50.813	246	117	3	102	343	2	247	3.83e-73	227
Msa1075380	AT4G33420.2	41.748	309	165	7	36	343	78	372	8.04e-73	230
Msa1075380	AT2G34060.1	38.762	307	182	5	38	340	39	343	5.88e-72	227
Msa1075380	AT5G67400.1	40.673	327	184	8	18	339	4	325	1.06e-71	226
Msa1075380	AT4G37520.2	40.789	304	171	5	39	339	25	322	1.14e-71	226
Msa1075380	AT5G24070.1	39.937	318	174	9	34	344	29	336	4.00e-71	225
Msa1075380	AT4G33870.1	35.988	339	178	5	38	341	65	399	1.02e-70	226
Msa1075380	AT1G34510.1	39.117	317	175	7	29	343	9	309	6.25e-70	221
Msa1075380	AT4G37530.2	45.594	261	138	3	34	291	20	279	1.53e-69	219
Msa1075380	AT4G26010.1	40.000	320	168	9	29	343	9	309	5.71e-69	218
Msa1075380	AT4G26010.2	40.000	320	168	9	29	343	37	337	8.88e-69	219
Msa1075380	AT4G17690.1	38.487	304	179	3	41	343	26	322	7.55e-68	216
Msa1075380	AT5G22410.1	40.909	308	167	10	38	340	25	322	4.63e-67	214
Msa1075380	AT4G31760.1	39.198	324	185	6	24	343	11	326	3.38e-66	212
Msa1075380	AT1G30870.1	38.961	308	170	9	41	343	51	345	6.21e-66	212
Msa1075380	AT5G47000.1	35.577	312	194	3	33	343	25	330	1.33e-65	211
Msa1075380	AT2G24800.1	38.835	309	177	5	39	343	29	329	5.77e-65	209
Msa1075380	AT1G24110.1	35.604	323	199	6	26	343	4	322	5.05e-63	204
Msa1075380	AT3G28200.1	34.194	310	191	4	37	343	17	316	1.80e-61	199
Msa1075380	AT4G21960.1	36.304	303	179	6	41	339	31	323	1.25e-59	195
Msa1075380	AT5G40150.1	35.390	308	191	3	37	343	28	328	3.42e-59	194
Msa1075380	AT2G37130.1	33.333	309	193	5	39	343	28	327	8.10e-54	180
Msa1075380	AT2G37130.2	33.663	303	188	5	45	343	3	296	1.36e-53	178
Msa1075380	AT3G17070.1	33.856	319	178	8	41	343	38	339	7.97e-49	167
Msa1075380	AT4G25980.2	46.448	183	93	3	29	211	59	236	4.11e-48	164
Msa1075380	AT5G39580.2	48.705	193	91	6	28	218	10	196	1.38e-46	158
Msa1075380	AT2G24800.2	40.462	173	98	1	39	211	29	196	1.49e-35	130
Msa1075380	AT3G17070.2	31.271	291	166	9	69	343	4	276	3.74e-34	127
Msa1075380	AT3G42570.1	34.513	113	72	2	98	209	38	149	1.01e-13	68.6
Msa1075380	AT1G77490.2	26.515	264	151	11	75	325	106	339	1.78e-13	71.2
Msa1075380	AT1G77490.1	26.515	264	151	11	75	325	106	339	2.43e-13	70.9
Msa1075380	AT4G35970.2	29.798	198	91	7	98	291	55	208	1.74e-12	66.6

Find 62 sgRNAs with CRISPR-Local

Find 188 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCTCCTTGACTTCCCATTAA+TGG	0.180025	7_2:+73598011	None:intergenic
GGGTAATATTAGTCCATTAA+TGG	0.242444	7_2:-73598024	Msa1075380:CDS
TGCTGAAGCTTCTGTATCTT+TGG	0.257038	7_2:-73599048	Msa1075380:intron
TAAGCCAACAGCAGAAAATT+TGG	0.257204	7_2:+73598762	None:intergenic
TCCAATTGTAGGAAAGTTAA+TGG	0.269235	7_2:-73597981	Msa1075380:CDS
TCCATTAACTTTCCTACAAT+TGG	0.278391	7_2:+73597980	None:intergenic
GAATATTAGCACTGTGAAAA+TGG	0.281508	7_2:+73599491	None:intergenic
TGTGTCTTGTGCTGATATTT+TGG	0.282472	7_2:-73599078	Msa1075380:CDS
GAATTAGGTGCACATACTTT+TGG	0.305338	7_2:-73598377	Msa1075380:intron
CAACAAAATTGTCCACAAAA+TGG	0.305817	7_2:-73598257	Msa1075380:CDS
CATTAGTGGAAAACAATTCT+TGG	0.347221	7_2:+73598132	None:intergenic
CTGAACAACATTTCTCACTA+TGG	0.348902	7_2:+73599398	None:intergenic
CCACGAGCTGAATTATTGTT+AGG	0.354824	7_2:+73599155	None:intergenic
AGTGATCTAGTTGCATTATC+TGG	0.368131	7_2:-73598733	Msa1075380:intron
TGCAGTCAGGAGGTCCTTCA+TGG	0.392241	7_2:-73598882	Msa1075380:intron
CACTGAAGTTGAATAGTCTT+TGG	0.398801	7_2:+73598330	None:intergenic
TCGAAATTGTTTGGTGATGA+AGG	0.418026	7_2:+73598206	None:intergenic
GGTAATATTAGTCCATTAAT+GGG	0.424844	7_2:-73598023	Msa1075380:CDS
CTCACTATGGAAGAAACATT+GGG	0.436946	7_2:+73599411	None:intergenic
GTTGAATTCAGTGTTGGATC+AGG	0.449005	7_2:+73598296	None:intergenic
AGAAAATTTGGCAGTGACAT+TGG	0.460032	7_2:+73598774	None:intergenic
GATTGTGGCAGCACCATTAG+TGG	0.462604	7_2:+73598118	None:intergenic
GAGAAATTAGATCCAATTGT+AGG	0.464574	7_2:-73597992	Msa1075380:CDS
ATTCTTGGTCCGTTTGAAGA+AGG	0.471200	7_2:+73598147	None:intergenic
AATATTACCCATGTTAATCA+TGG	0.480311	7_2:+73598037	None:intergenic
GCTTTCAGTTGGAGCAGGAA+TGG	0.491093	7_2:+73598801	None:intergenic
GCTAAGCTTTCAGTTGGAGC+AGG	0.495793	7_2:+73598796	None:intergenic
AAATCAAGGCCTTCTTCAAA+CGG	0.495854	7_2:-73598156	Msa1075380:CDS
TAGTTGTTGTCGAAATTGTT+TGG	0.499968	7_2:+73598197	None:intergenic
ACATTGGCTAAGCTTTCAGT+TGG	0.500974	7_2:+73598790	None:intergenic
TCTCACTATGGAAGAAACAT+TGG	0.503003	7_2:+73599410	None:intergenic
CCTTCATGGAATGTACTACT+TGG	0.512650	7_2:-73598868	Msa1075380:CDS
CTATTCAACTTCAGTGGCAC+AGG	0.520255	7_2:-73598323	Msa1075380:CDS
TGTTAAGTCCATGATTAACA+TGG	0.529221	7_2:-73598045	Msa1075380:CDS
GAGCATGTGATGGATTAAGA+AGG	0.529837	7_2:+73599466	None:intergenic
AAAGTAGGAGAAAACATGGT+TGG	0.544154	7_2:+73599519	None:intergenic
CATGAAACTGAAGACGGGTT+AGG	0.549547	7_2:+73599340	None:intergenic
GTACTACTTGGCAGAAGGGA+TGG	0.553719	7_2:-73598856	Msa1075380:CDS
GGTCTGATTGCAAACCAATC+TGG	0.553725	7_2:-73598835	Msa1075380:CDS
CGAAATTGTTTGGTGATGAA+GGG	0.556805	7_2:+73598207	None:intergenic
AATTGTCCACAAAATGGAAG+TGG	0.563268	7_2:-73598251	Msa1075380:CDS
GTTGTTAACAATGGAGATTG+TGG	0.566203	7_2:+73598103	None:intergenic
GTTAAGTCCATGATTAACAT+GGG	0.566926	7_2:-73598044	Msa1075380:CDS
GAATGTACTACTTGGCAGAA+GGG	0.569042	7_2:-73598860	Msa1075380:CDS
CATGTGATGGATTAAGAAGG+AGG	0.571412	7_2:+73599469	None:intergenic
GAGGTTAGTTGAGCATGTGA+TGG	0.579020	7_2:+73599456	None:intergenic
AGATATGTTGAATTCAGTGT+TGG	0.579335	7_2:+73598290	None:intergenic
GGAATGTACTACTTGGCAGA+AGG	0.583445	7_2:-73598861	Msa1075380:CDS
GCTTGCAAAGTTGTTAACAA+TGG	0.593422	7_2:+73598094	None:intergenic
GCAATCATGAAACTGAAGAC+GGG	0.594589	7_2:+73599335	None:intergenic
GTTAATCATGGACTTAACAA+AGG	0.595376	7_2:+73598049	None:intergenic
AGTCCATTAATGGGAAGTCA+AGG	0.598007	7_2:-73598014	Msa1075380:CDS
AGCAATCATGAAACTGAAGA+CGG	0.599227	7_2:+73599334	None:intergenic
TGGATGTGTTGGCACCAGAT+TGG	0.602779	7_2:+73598821	None:intergenic
CCAAGTAGTACATTCCATGA+AGG	0.604615	7_2:+73598868	None:intergenic
CAAAGACTATTCAACTTCAG+TGG	0.618577	7_2:-73598329	Msa1075380:CDS
CTGAAGACGGGTTAGGCTCG+CGG	0.619803	7_2:+73599347	None:intergenic
CCTAACAATAATTCAGCTCG+TGG	0.620664	7_2:-73599155	Msa1075380:CDS
TGGAGCAGGAATGGATGTGT+TGG	0.622693	7_2:+73598810	None:intergenic
TCAGCACAAGACACAACAGC+AGG	0.630251	7_2:+73599086	None:intergenic
GATGTATATTTGCAGTCAGG+AGG	0.632669	7_2:-73598892	Msa1075380:intron
TCACTATGGAAGAAACATTG+GGG	0.713143	7_2:+73599412	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TAATTAACTAAATATGAATT+AGG	+	chr7_2:73598664-73598683	None:intergenic	10.0%
!!	TAATTAACTAAATATGAATT+AGG	+	chr7_2:73598664-73598683	None:intergenic	10.0%
!!!	ATTATTAATTTGTGTATTTC+AGG	-	chr7_2:73598441-73598460	Msa1075380:intron	15.0%
!!!	TTATTAATTTGTGTATTTCA+GGG	-	chr7_2:73598442-73598461	Msa1075380:intron	15.0%
!!	ATTTCAACAATTATATCTAA+TGG	-	chr7_2:73599141-73599160	Msa1075380:CDS	15.0%
!!!	ATTATTAATTTGTGTATTTC+AGG	-	chr7_2:73598441-73598460	Msa1075380:intron	15.0%
!!!	TTATTAATTTGTGTATTTCA+GGG	-	chr7_2:73598442-73598461	Msa1075380:intron	15.0%
!!	ATTTCAACAATTATATCTAA+TGG	-	chr7_2:73599141-73599160	Msa1075380:CDS	15.0%
!!!	TTGAAGATAAAGTTTTCATT+GGG	+	chr7_2:73598049-73598068	None:intergenic	20.0%
!!	TAGCAAACTAATATTTATCA+TGG	-	chr7_2:73598720-73598739	Msa1075380:intron	20.0%
!!	AGACTTTAATTAGAATATGT+TGG	-	chr7_2:73598998-73599017	Msa1075380:intron	20.0%
!!	TAATTAGAATATGTTGGATT+AGG	-	chr7_2:73599004-73599023	Msa1075380:intron	20.0%
!!	TATATCTAATGGTTGAAATT+TGG	-	chr7_2:73599152-73599171	Msa1075380:CDS	20.0%
!!!	TTGAAGATAAAGTTTTCATT+GGG	+	chr7_2:73598049-73598068	None:intergenic	20.0%
!!	TAGCAAACTAATATTTATCA+TGG	-	chr7_2:73598720-73598739	Msa1075380:intron	20.0%
!!	AGACTTTAATTAGAATATGT+TGG	-	chr7_2:73598998-73599017	Msa1075380:intron	20.0%
!!	TAATTAGAATATGTTGGATT+AGG	-	chr7_2:73599004-73599023	Msa1075380:intron	20.0%
!!	TATATCTAATGGTTGAAATT+TGG	-	chr7_2:73599152-73599171	Msa1075380:CDS	20.0%
!!	CTTGAAGATAAAGTTTTCAT+TGG	+	chr7_2:73598050-73598069	None:intergenic	25.0%
!	ATTTCTTGATGAAATATCTG+AGG	+	chr7_2:73598130-73598149	None:intergenic	25.0%
!	ATAAAAAGTAGGAGAAAACA+TGG	+	chr7_2:73598172-73598191	None:intergenic	25.0%
!	GTGAAAATGGAATAAAAAGT+AGG	+	chr7_2:73598183-73598202	None:intergenic	25.0%
!!	AAGTTTTCATGAGTTAAACT+AGG	-	chr7_2:73599091-73599110	Msa1075380:CDS	25.0%
!	AAGAATCTTCTCAAAAATCA+AGG	-	chr7_2:73599514-73599533	Msa1075380:CDS	25.0%
!	AATATTACCCATGTTAATCA+TGG	+	chr7_2:73599650-73599669	None:intergenic	25.0%
!	GGTAATATTAGTCCATTAAT+GGG	-	chr7_2:73599661-73599680	Msa1075380:intron	25.0%
!!	CTTGAAGATAAAGTTTTCAT+TGG	+	chr7_2:73598050-73598069	None:intergenic	25.0%
!	ATTTCTTGATGAAATATCTG+AGG	+	chr7_2:73598130-73598149	None:intergenic	25.0%
!	ATAAAAAGTAGGAGAAAACA+TGG	+	chr7_2:73598172-73598191	None:intergenic	25.0%
!	GTGAAAATGGAATAAAAAGT+AGG	+	chr7_2:73598183-73598202	None:intergenic	25.0%
!!	AAGTTTTCATGAGTTAAACT+AGG	-	chr7_2:73599091-73599110	Msa1075380:CDS	25.0%
!	AAGAATCTTCTCAAAAATCA+AGG	-	chr7_2:73599514-73599533	Msa1075380:CDS	25.0%
!	AATATTACCCATGTTAATCA+TGG	+	chr7_2:73599650-73599669	None:intergenic	25.0%
!	GGTAATATTAGTCCATTAAT+GGG	-	chr7_2:73599661-73599680	Msa1075380:intron	25.0%
	GAATATTAGCACTGTGAAAA+TGG	+	chr7_2:73598196-73598215	None:intergenic	30.0%
	TGATTAATGAGCTAGAGTTT+AGG	-	chr7_2:73598399-73598418	Msa1075380:intron	30.0%
!	GCATCTCTTTTATTAGATCA+AGG	-	chr7_2:73598472-73598491	Msa1075380:intron	30.0%
!	TCTCTTTTATTAGATCAAGG+TGG	-	chr7_2:73598475-73598494	Msa1075380:intron	30.0%
!	TAACTATTGGTTGACACAAA+TGG	-	chr7_2:73599276-73599295	Msa1075380:intron	30.0%
	CAAATGGATCAACTTGAATT+AGG	-	chr7_2:73599292-73599311	Msa1075380:intron	30.0%
	AGATATGTTGAATTCAGTGT+TGG	+	chr7_2:73599397-73599416	None:intergenic	30.0%
	CAACAAAATTGTCCACAAAA+TGG	-	chr7_2:73599427-73599446	Msa1075380:CDS	30.0%
	TAGTTGTTGTCGAAATTGTT+TGG	+	chr7_2:73599490-73599509	None:intergenic	30.0%
	CATTAGTGGAAAACAATTCT+TGG	+	chr7_2:73599555-73599574	None:intergenic	30.0%
!	CAAGAATTGTTTTCCACTAA+TGG	-	chr7_2:73599553-73599572	Msa1075380:CDS	30.0%
	GTTAATCATGGACTTAACAA+AGG	+	chr7_2:73599638-73599657	None:intergenic	30.0%
	TGTTAAGTCCATGATTAACA+TGG	-	chr7_2:73599639-73599658	Msa1075380:intron	30.0%
	GTTAAGTCCATGATTAACAT+GGG	-	chr7_2:73599640-73599659	Msa1075380:intron	30.0%
	GGGTAATATTAGTCCATTAA+TGG	-	chr7_2:73599660-73599679	Msa1075380:intron	30.0%
	GAGAAATTAGATCCAATTGT+AGG	-	chr7_2:73599692-73599711	Msa1075380:intron	30.0%
	TCCAATTGTAGGAAAGTTAA+TGG	-	chr7_2:73599703-73599722	Msa1075380:intron	30.0%
	TCCATTAACTTTCCTACAAT+TGG	+	chr7_2:73599707-73599726	None:intergenic	30.0%
	GAATATTAGCACTGTGAAAA+TGG	+	chr7_2:73598196-73598215	None:intergenic	30.0%
	TGATTAATGAGCTAGAGTTT+AGG	-	chr7_2:73598399-73598418	Msa1075380:intron	30.0%
!	GCATCTCTTTTATTAGATCA+AGG	-	chr7_2:73598472-73598491	Msa1075380:intron	30.0%
!	TCTCTTTTATTAGATCAAGG+TGG	-	chr7_2:73598475-73598494	Msa1075380:intron	30.0%
!	TAACTATTGGTTGACACAAA+TGG	-	chr7_2:73599276-73599295	Msa1075380:intron	30.0%
	CAAATGGATCAACTTGAATT+AGG	-	chr7_2:73599292-73599311	Msa1075380:intron	30.0%
	AGATATGTTGAATTCAGTGT+TGG	+	chr7_2:73599397-73599416	None:intergenic	30.0%
	CAACAAAATTGTCCACAAAA+TGG	-	chr7_2:73599427-73599446	Msa1075380:CDS	30.0%
	TAGTTGTTGTCGAAATTGTT+TGG	+	chr7_2:73599490-73599509	None:intergenic	30.0%
	CATTAGTGGAAAACAATTCT+TGG	+	chr7_2:73599555-73599574	None:intergenic	30.0%
!	CAAGAATTGTTTTCCACTAA+TGG	-	chr7_2:73599553-73599572	Msa1075380:CDS	30.0%
	GTTAATCATGGACTTAACAA+AGG	+	chr7_2:73599638-73599657	None:intergenic	30.0%
	TGTTAAGTCCATGATTAACA+TGG	-	chr7_2:73599639-73599658	Msa1075380:intron	30.0%
	GTTAAGTCCATGATTAACAT+GGG	-	chr7_2:73599640-73599659	Msa1075380:intron	30.0%
	GGGTAATATTAGTCCATTAA+TGG	-	chr7_2:73599660-73599679	Msa1075380:intron	30.0%
	GAGAAATTAGATCCAATTGT+AGG	-	chr7_2:73599692-73599711	Msa1075380:intron	30.0%
	TCCAATTGTAGGAAAGTTAA+TGG	-	chr7_2:73599703-73599722	Msa1075380:intron	30.0%
	TCCATTAACTTTCCTACAAT+TGG	+	chr7_2:73599707-73599726	None:intergenic	30.0%
!!!	GAAAACATGGTTGGCTTTTT+TGG	+	chr7_2:73598159-73598178	None:intergenic	35.0%
	AAAGTAGGAGAAAACATGGT+TGG	+	chr7_2:73598168-73598187	None:intergenic	35.0%
!!!	TGTTTTCGAGTAGAATGTTG+AGG	+	chr7_2:73598250-73598269	None:intergenic	35.0%
	TCACTATGGAAGAAACATTG+GGG	+	chr7_2:73598275-73598294	None:intergenic	35.0%
	CTCACTATGGAAGAAACATT+GGG	+	chr7_2:73598276-73598295	None:intergenic	35.0%
	TCTCACTATGGAAGAAACAT+TGG	+	chr7_2:73598277-73598296	None:intergenic	35.0%
	CTGAACAACATTTCTCACTA+TGG	+	chr7_2:73598289-73598308	None:intergenic	35.0%
	AGCAATCATGAAACTGAAGA+CGG	+	chr7_2:73598353-73598372	None:intergenic	35.0%
!	AGGACATGAATTTTCAACAG+AGG	+	chr7_2:73598581-73598600	None:intergenic	35.0%
!!	TGTGTCTTGTGCTGATATTT+TGG	-	chr7_2:73598606-73598625	Msa1075380:intron	35.0%
	GATGATGTATATTTGCAGTC+AGG	-	chr7_2:73598789-73598808	Msa1075380:CDS	35.0%
	AGAAAATTTGGCAGTGACAT+TGG	+	chr7_2:73598913-73598932	None:intergenic	35.0%
	TAAGCCAACAGCAGAAAATT+TGG	+	chr7_2:73598925-73598944	None:intergenic	35.0%
	AGTGATCTAGTTGCATTATC+TGG	-	chr7_2:73598951-73598970	Msa1075380:intron	35.0%
!	GAATTAGGTGCACATACTTT+TGG	-	chr7_2:73599307-73599326	Msa1075380:intron	35.0%
	CACTGAAGTTGAATAGTCTT+TGG	+	chr7_2:73599357-73599376	None:intergenic	35.0%
	CAAAGACTATTCAACTTCAG+TGG	-	chr7_2:73599355-73599374	Msa1075380:CDS	35.0%
	AATTGTCCACAAAATGGAAG+TGG	-	chr7_2:73599433-73599452	Msa1075380:CDS	35.0%
!!	CGAAATTGTTTGGTGATGAA+GGG	+	chr7_2:73599480-73599499	None:intergenic	35.0%
!!	TCGAAATTGTTTGGTGATGA+AGG	+	chr7_2:73599481-73599500	None:intergenic	35.0%
	AAATCAAGGCCTTCTTCAAA+CGG	-	chr7_2:73599528-73599547	Msa1075380:CDS	35.0%
	GTTGTTAACAATGGAGATTG+TGG	+	chr7_2:73599584-73599603	None:intergenic	35.0%
	GCTTGCAAAGTTGTTAACAA+TGG	+	chr7_2:73599593-73599612	None:intergenic	35.0%
	AGGCTTCAAAAAAAGCTGTT+TGG	+	chr7_2:73599618-73599637	None:intergenic	35.0%
!!!	GAAAACATGGTTGGCTTTTT+TGG	+	chr7_2:73598159-73598178	None:intergenic	35.0%
	AAAGTAGGAGAAAACATGGT+TGG	+	chr7_2:73598168-73598187	None:intergenic	35.0%
!!!	TGTTTTCGAGTAGAATGTTG+AGG	+	chr7_2:73598250-73598269	None:intergenic	35.0%
	TCACTATGGAAGAAACATTG+GGG	+	chr7_2:73598275-73598294	None:intergenic	35.0%
	CTCACTATGGAAGAAACATT+GGG	+	chr7_2:73598276-73598295	None:intergenic	35.0%
	TCTCACTATGGAAGAAACAT+TGG	+	chr7_2:73598277-73598296	None:intergenic	35.0%
	CTGAACAACATTTCTCACTA+TGG	+	chr7_2:73598289-73598308	None:intergenic	35.0%
	AGCAATCATGAAACTGAAGA+CGG	+	chr7_2:73598353-73598372	None:intergenic	35.0%
!	AGGACATGAATTTTCAACAG+AGG	+	chr7_2:73598581-73598600	None:intergenic	35.0%
!!	TGTGTCTTGTGCTGATATTT+TGG	-	chr7_2:73598606-73598625	Msa1075380:intron	35.0%
	GATGATGTATATTTGCAGTC+AGG	-	chr7_2:73598789-73598808	Msa1075380:CDS	35.0%
	AGAAAATTTGGCAGTGACAT+TGG	+	chr7_2:73598913-73598932	None:intergenic	35.0%
	TAAGCCAACAGCAGAAAATT+TGG	+	chr7_2:73598925-73598944	None:intergenic	35.0%
	AGTGATCTAGTTGCATTATC+TGG	-	chr7_2:73598951-73598970	Msa1075380:intron	35.0%
!	GAATTAGGTGCACATACTTT+TGG	-	chr7_2:73599307-73599326	Msa1075380:intron	35.0%
	CACTGAAGTTGAATAGTCTT+TGG	+	chr7_2:73599357-73599376	None:intergenic	35.0%
	CAAAGACTATTCAACTTCAG+TGG	-	chr7_2:73599355-73599374	Msa1075380:CDS	35.0%
	AATTGTCCACAAAATGGAAG+TGG	-	chr7_2:73599433-73599452	Msa1075380:CDS	35.0%
!!	CGAAATTGTTTGGTGATGAA+GGG	+	chr7_2:73599480-73599499	None:intergenic	35.0%
!!	TCGAAATTGTTTGGTGATGA+AGG	+	chr7_2:73599481-73599500	None:intergenic	35.0%
	AAATCAAGGCCTTCTTCAAA+CGG	-	chr7_2:73599528-73599547	Msa1075380:CDS	35.0%
	GTTGTTAACAATGGAGATTG+TGG	+	chr7_2:73599584-73599603	None:intergenic	35.0%
	GCTTGCAAAGTTGTTAACAA+TGG	+	chr7_2:73599593-73599612	None:intergenic	35.0%
	AGGCTTCAAAAAAAGCTGTT+TGG	+	chr7_2:73599618-73599637	None:intergenic	35.0%
!!	CATGTGATGGATTAAGAAGG+AGG	+	chr7_2:73598218-73598237	None:intergenic	40.0%
!!	GAGCATGTGATGGATTAAGA+AGG	+	chr7_2:73598221-73598240	None:intergenic	40.0%
	GCAATCATGAAACTGAAGAC+GGG	+	chr7_2:73598352-73598371	None:intergenic	40.0%
	CCACGAGCTGAATTATTGTT+AGG	+	chr7_2:73598532-73598551	None:intergenic	40.0%
	CCTAACAATAATTCAGCTCG+TGG	-	chr7_2:73598529-73598548	Msa1075380:intron	40.0%
	TGCTGAAGCTTCTGTATCTT+TGG	-	chr7_2:73598636-73598655	Msa1075380:intron	40.0%
	GATGTATATTTGCAGTCAGG+AGG	-	chr7_2:73598792-73598811	Msa1075380:CDS	40.0%
	CCAAGTAGTACATTCCATGA+AGG	+	chr7_2:73598819-73598838	None:intergenic	40.0%
	CCTTCATGGAATGTACTACT+TGG	-	chr7_2:73598816-73598835	Msa1075380:CDS	40.0%
	GAATGTACTACTTGGCAGAA+GGG	-	chr7_2:73598824-73598843	Msa1075380:CDS	40.0%
!	ACATTGGCTAAGCTTTCAGT+TGG	+	chr7_2:73598897-73598916	None:intergenic	40.0%
!	ACTGCCAAATTTTCTGCTGT+TGG	-	chr7_2:73598918-73598937	Msa1075380:intron	40.0%
!	GTTGAATTCAGTGTTGGATC+AGG	+	chr7_2:73599391-73599410	None:intergenic	40.0%
!	GTGTTACCACTTCCATTTTG+TGG	+	chr7_2:73599442-73599461	None:intergenic	40.0%
	ATTCTTGGTCCGTTTGAAGA+AGG	+	chr7_2:73599540-73599559	None:intergenic	40.0%
	AGTCCATTAATGGGAAGTCA+AGG	-	chr7_2:73599670-73599689	Msa1075380:intron	40.0%
	TCTCCTTGACTTCCCATTAA+TGG	+	chr7_2:73599676-73599695	None:intergenic	40.0%
!!	CATGTGATGGATTAAGAAGG+AGG	+	chr7_2:73598218-73598237	None:intergenic	40.0%
!!	GAGCATGTGATGGATTAAGA+AGG	+	chr7_2:73598221-73598240	None:intergenic	40.0%
	GCAATCATGAAACTGAAGAC+GGG	+	chr7_2:73598352-73598371	None:intergenic	40.0%
	CCACGAGCTGAATTATTGTT+AGG	+	chr7_2:73598532-73598551	None:intergenic	40.0%
	CCTAACAATAATTCAGCTCG+TGG	-	chr7_2:73598529-73598548	Msa1075380:intron	40.0%
	TGCTGAAGCTTCTGTATCTT+TGG	-	chr7_2:73598636-73598655	Msa1075380:intron	40.0%
	GATGTATATTTGCAGTCAGG+AGG	-	chr7_2:73598792-73598811	Msa1075380:CDS	40.0%
	CCAAGTAGTACATTCCATGA+AGG	+	chr7_2:73598819-73598838	None:intergenic	40.0%
	CCTTCATGGAATGTACTACT+TGG	-	chr7_2:73598816-73598835	Msa1075380:CDS	40.0%
	GAATGTACTACTTGGCAGAA+GGG	-	chr7_2:73598824-73598843	Msa1075380:CDS	40.0%
!	ACATTGGCTAAGCTTTCAGT+TGG	+	chr7_2:73598897-73598916	None:intergenic	40.0%
!	ACTGCCAAATTTTCTGCTGT+TGG	-	chr7_2:73598918-73598937	Msa1075380:intron	40.0%
!	GTTGAATTCAGTGTTGGATC+AGG	+	chr7_2:73599391-73599410	None:intergenic	40.0%
!	GTGTTACCACTTCCATTTTG+TGG	+	chr7_2:73599442-73599461	None:intergenic	40.0%
	ATTCTTGGTCCGTTTGAAGA+AGG	+	chr7_2:73599540-73599559	None:intergenic	40.0%
	AGTCCATTAATGGGAAGTCA+AGG	-	chr7_2:73599670-73599689	Msa1075380:intron	40.0%
	TCTCCTTGACTTCCCATTAA+TGG	+	chr7_2:73599676-73599695	None:intergenic	40.0%
!	GAGGTTAGTTGAGCATGTGA+TGG	+	chr7_2:73598231-73598250	None:intergenic	45.0%
!	CATGAAACTGAAGACGGGTT+AGG	+	chr7_2:73598347-73598366	None:intergenic	45.0%
	GGAATGTACTACTTGGCAGA+AGG	-	chr7_2:73598823-73598842	Msa1075380:CDS	45.0%
	GGTCTGATTGCAAACCAATC+TGG	-	chr7_2:73598849-73598868	Msa1075380:CDS	45.0%
	CTGCACTAACTGAACGACTA+AGG	+	chr7_2:73599117-73599136	None:intergenic	45.0%
	GTTGAAATTTGGACGCACGA+CGG	-	chr7_2:73599163-73599182	Msa1075380:CDS	45.0%
	CTATTCAACTTCAGTGGCAC+AGG	-	chr7_2:73599361-73599380	Msa1075380:CDS	45.0%
!	GAGGTTAGTTGAGCATGTGA+TGG	+	chr7_2:73598231-73598250	None:intergenic	45.0%
!	CATGAAACTGAAGACGGGTT+AGG	+	chr7_2:73598347-73598366	None:intergenic	45.0%
	GGAATGTACTACTTGGCAGA+AGG	-	chr7_2:73598823-73598842	Msa1075380:CDS	45.0%
	GGTCTGATTGCAAACCAATC+TGG	-	chr7_2:73598849-73598868	Msa1075380:CDS	45.0%
	CTGCACTAACTGAACGACTA+AGG	+	chr7_2:73599117-73599136	None:intergenic	45.0%
	GTTGAAATTTGGACGCACGA+CGG	-	chr7_2:73599163-73599182	Msa1075380:CDS	45.0%
	CTATTCAACTTCAGTGGCAC+AGG	-	chr7_2:73599361-73599380	Msa1075380:CDS	45.0%
!!!	ATTTTTTTTTTTTTAACTAT+TGG	-	chr7_2:73599263-73599282	Msa1075380:intron	5.0%
!!!	ATTTTTTTTTTTTTAACTAT+TGG	-	chr7_2:73599263-73599282	Msa1075380:intron	5.0%
	TCAGCACAAGACACAACAGC+AGG	+	chr7_2:73598601-73598620	None:intergenic	50.0%
	GTACTACTTGGCAGAAGGGA+TGG	-	chr7_2:73598828-73598847	Msa1075380:CDS	50.0%
!	TGGATGTGTTGGCACCAGAT+TGG	+	chr7_2:73598866-73598885	None:intergenic	50.0%
	TGGAGCAGGAATGGATGTGT+TGG	+	chr7_2:73598877-73598896	None:intergenic	50.0%
	GCTTTCAGTTGGAGCAGGAA+TGG	+	chr7_2:73598886-73598905	None:intergenic	50.0%
	GCTAAGCTTTCAGTTGGAGC+AGG	+	chr7_2:73598891-73598910	None:intergenic	50.0%
	GATTGTGGCAGCACCATTAG+TGG	+	chr7_2:73599569-73599588	None:intergenic	50.0%
	TCAGCACAAGACACAACAGC+AGG	+	chr7_2:73598601-73598620	None:intergenic	50.0%
	GTACTACTTGGCAGAAGGGA+TGG	-	chr7_2:73598828-73598847	Msa1075380:CDS	50.0%
!	TGGATGTGTTGGCACCAGAT+TGG	+	chr7_2:73598866-73598885	None:intergenic	50.0%
	TGGAGCAGGAATGGATGTGT+TGG	+	chr7_2:73598877-73598896	None:intergenic	50.0%
	GCTTTCAGTTGGAGCAGGAA+TGG	+	chr7_2:73598886-73598905	None:intergenic	50.0%
	GCTAAGCTTTCAGTTGGAGC+AGG	+	chr7_2:73598891-73598910	None:intergenic	50.0%
	GATTGTGGCAGCACCATTAG+TGG	+	chr7_2:73599569-73599588	None:intergenic	50.0%
	GTTAGGCTCGCGGTAATACG+AGG	+	chr7_2:73598330-73598349	None:intergenic	55.0%
	TGCAGTCAGGAGGTCCTTCA+TGG	-	chr7_2:73598802-73598821	Msa1075380:CDS	55.0%
	GTTAGGCTCGCGGTAATACG+AGG	+	chr7_2:73598330-73598349	None:intergenic	55.0%
	TGCAGTCAGGAGGTCCTTCA+TGG	-	chr7_2:73598802-73598821	Msa1075380:CDS	55.0%
!!	CTGAAGACGGGTTAGGCTCG+CGG	+	chr7_2:73598340-73598359	None:intergenic	60.0%
!!	CTGAAGACGGGTTAGGCTCG+CGG	+	chr7_2:73598340-73598359	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr7_2	gene	73597974	73599732	73597974	ID=Msa1075380;Name=Msa1075380
chr7_2	mRNA	73597974	73599732	73597974	ID=Msa1075380-mRNA-1;Parent=Msa1075380;Name=Msa1075380-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0\|0.6\|0.16\|0.66\|0.6\|0.5\|6\|0\|345
chr7_2	exon	73599729	73599732	73599729	ID=Msa1075380-mRNA-1:exon:17159;Parent=Msa1075380-mRNA-1
chr7_2	exon	73599672	73599677	73599672	ID=Msa1075380-mRNA-1:exon:17158;Parent=Msa1075380-mRNA-1
chr7_2	exon	73599326	73599573	73599326	ID=Msa1075380-mRNA-1:exon:17157;Parent=Msa1075380-mRNA-1
chr7_2	exon	73599049	73599243	73599049	ID=Msa1075380-mRNA-1:exon:17156;Parent=Msa1075380-mRNA-1
chr7_2	exon	73598734	73598899	73598734	ID=Msa1075380-mRNA-1:exon:17155;Parent=Msa1075380-mRNA-1
chr7_2	exon	73597974	73598392	73597974	ID=Msa1075380-mRNA-1:exon:17154;Parent=Msa1075380-mRNA-1
chr7_2	CDS	73599729	73599732	73599729	ID=Msa1075380-mRNA-1:cds;Parent=Msa1075380-mRNA-1
chr7_2	CDS	73599672	73599677	73599672	ID=Msa1075380-mRNA-1:cds;Parent=Msa1075380-mRNA-1
chr7_2	CDS	73599326	73599573	73599326	ID=Msa1075380-mRNA-1:cds;Parent=Msa1075380-mRNA-1
chr7_2	CDS	73599049	73599243	73599049	ID=Msa1075380-mRNA-1:cds;Parent=Msa1075380-mRNA-1
chr7_2	CDS	73598734	73598899	73598734	ID=Msa1075380-mRNA-1:cds;Parent=Msa1075380-mRNA-1
chr7_2	CDS	73597974	73598392	73597974	ID=Msa1075380-mRNA-1:cds;Parent=Msa1075380-mRNA-1

Gene Sequence

>Msa1075380

ATGATTCTAAATATTTCATCAAGAAATCAAACTCCAAAAAAGCCAACCATGTTTTCTCCTACTTTTTATTCCATTTTCACAGTGCTAATATTCCTCCTTCTTAATCCATCACATGCTCAACTAACCTCAACATTCTACTCGAAAACATGCCCCAATGTTTCTTCCATAGTGAGAAATGTTGTTCAGCAAGCTCTGCAAAATGATCCTCGTATTACCGCGAGCCTAACCCGTCTTCAGTTTCATGATTGCTTTGTTAATGGATGTGATGCATCTCTTTTATTAGATCAAGGTGGAAACATAACACTAAGTGAGAAAAATGCTGTTCCTAACAATAATTCAGCTCGTGGCTTTGATGTAGTTGACAAAATCAAAACCTCTGTTGAAAATTCATGTCCTGCTGTTGTGTCTTGTGCTGATATTTTGGCTCTTGCTGCTGAAGCTTCTGTATCTTTGTCAGGAGGTCCTTCATGGAATGTACTACTTGGCAGAAGGGATGGTCTGATTGCAAACCAATCTGGTGCCAACACATCCATTCCTGCTCCAACTGAAAGCTTAGCCAATGTCACTGCCAAATTTTCTGCTGTTGGCTTAAACACAAGTGATCTAGTTGCATTATCTGGTGCACATACTTTTGGTCGTGCACAATGTAGATTTTTCAACCAAAGACTATTCAACTTCAGTGGCACAGGTAAGCCTGATCCAACACTGAATTCAACATATCTAGCAACTCTACAACAAAATTGTCCACAAAATGGAAGTGGTAACACACTAAACAATCTTGACCCTTCATCACCAAACAATTTCGACAACAACTACTTCAAGAATCTTCTCAAAAATCAAGGCCTTCTTCAAACGGACCAAGAATTGTTTTCCACTAATGGTGCTGCCACAATCTCCATTGTTAACAACTTTGCAAGCAACCAAACAGCTTTTTTTGAAGCCTTTGTTAAGTCCATGATTAACATGGGTAATATTAGTCCATTAATGGGAAGTCAAGGAGAAATTAGATCCAATTGTAGGAAAGTTAATGGAAGTTGA

Protein sequence

>Msa1075380

MILNISSRNQTPKKPTMFSPTFYSIFTVLIFLLLNPSHAQLTSTFYSKTCPNVSSIVRNVVQQALQNDPRITASLTRLQFHDCFVNGCDASLLLDQGGNITLSEKNAVPNNNSARGFDVVDKIKTSVENSCPAVVSCADILALAAEASVSLSGGPSWNVLLGRRDGLIANQSGANTSIPAPTESLANVTAKFSAVGLNTSDLVALSGAHTFGRAQCRFFNQRLFNFSGTGKPDPTLNSTYLATLQQNCPQNGSGNTLNNLDPSSPNNFDNNYFKNLLKNQGLLQTDQELFSTNGAATISIVNNFASNQTAFFEAFVKSMINMGNISPLMGSQGEIRSNCRKVNGS*