Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0657380 | XP_003629841.1 | 90.190 | 316 | 14 | 4 | 1 | 299 | 1 | 316 | 9.50e-161 | 472 |
| Msa0657380 | XP_003629841.1 | 95.469 | 309 | 13 | 1 | 298 | 605 | 8 | 316 | 3.26e-175 | 509 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0657380 | sp|Q8LEJ6|FLA11_ARATH | 51.579 | 190 | 81 | 6 | 361 | 548 | 18 | 198 | 1.32e-49 | 175 |
| Msa0657380 | sp|Q8LEJ6|FLA11_ARATH | 46.231 | 199 | 78 | 8 | 54 | 242 | 19 | 198 | 1.69e-39 | 148 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0657380 | G7L794 | 90.190 | 316 | 14 | 4 | 1 | 299 | 1 | 316 | 4.54e-161 | 472 |
| Msa0657380 | G7L794 | 95.469 | 309 | 13 | 1 | 298 | 605 | 8 | 316 | 1.56e-175 | 509 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0618050 | Msa0657380 | 0.857135 | 2.005599e-62 | -8.615850e-47 |
| Msa0618600 | Msa0657380 | 0.908211 | 2.190794e-81 | -8.615850e-47 |
| Msa0643240 | Msa0657380 | 0.918757 | 1.049786e-86 | -8.615850e-47 |
| Msa0657380 | Msa0682920 | 0.930614 | 1.266918e-93 | -8.615850e-47 |
| Msa0657380 | Msa0708510 | 0.976708 | 2.406806e-142 | -8.615850e-47 |
| Msa0657380 | Msa0792190 | 0.900866 | 4.768799e-78 | -8.615850e-47 |
| Msa0657380 | Msa1035290 | 0.847088 | 1.442963e-59 | -8.615850e-47 |
| Msa0657380 | Msa1075380 | 0.855425 | 6.364346e-62 | -8.615850e-47 |
| Msa0657380 | Msa1116460 | 0.858926 | 5.888090e-63 | -8.615850e-47 |
| Msa0657380 | Msa1199250 | 0.933402 | 1.981098e-95 | -8.615850e-47 |
| Msa0657380 | Msa1199260 | 0.840903 | 6.566947e-58 | -8.615850e-47 |
| Msa0657380 | Msa1252480 | 0.926891 | 2.509572e-91 | -8.615850e-47 |
| Msa0657380 | Msa1267350 | 0.897508 | 1.313783e-76 | -8.615850e-47 |
| Msa0657380 | Msa1293220 | 0.917215 | 6.966383e-86 | -8.615850e-47 |
| Msa0657380 | Msa1421310 | 0.846213 | 2.500861e-59 | -8.615850e-47 |
| Msa0142380 | Msa0657380 | 0.900132 | 9.940401e-78 | -8.615850e-47 |
| Msa0194000 | Msa0657380 | 0.936398 | 1.850672e-97 | -8.615850e-47 |
| Msa0221820 | Msa0657380 | 0.887532 | 1.313430e-72 | -8.615850e-47 |
| Msa0221830 | Msa0657380 | 0.803705 | 3.068782e-49 | -8.615850e-47 |
| Msa0235870 | Msa0657380 | 0.913519 | 5.602990e-84 | -8.615850e-47 |
| Msa0250450 | Msa0657380 | 0.826946 | 2.051734e-54 | -8.615850e-47 |
| Msa0263440 | Msa0657380 | 0.940288 | 3.012935e-100 | -8.615850e-47 |
| Msa0269380 | Msa0657380 | 0.899988 | 1.148342e-77 | -8.615850e-47 |
| Msa0288900 | Msa0657380 | 0.923258 | 3.367500e-89 | -8.615850e-47 |
| Msa0289060 | Msa0657380 | 0.816729 | 4.760337e-52 | -8.615850e-47 |
| Msa0289100 | Msa0657380 | 0.822861 | 1.888390e-53 | -8.615850e-47 |
| Msa0301030 | Msa0657380 | 0.934067 | 7.161762e-96 | -8.615850e-47 |
| Msa0314220 | Msa0657380 | 0.931828 | 2.119368e-94 | -8.615850e-47 |
| Msa0314330 | Msa0657380 | 0.897379 | 1.488185e-76 | -8.615850e-47 |
| Msa0327020 | Msa0657380 | 0.834674 | 2.614122e-56 | -8.615850e-47 |
| Msa0338580 | Msa0657380 | 0.901443 | 2.665695e-78 | -8.615850e-47 |
| Msa0485970 | Msa0657380 | 0.870425 | 1.473318e-66 | -8.615850e-47 |
| Msa0547390 | Msa0657380 | 0.902000 | 1.514656e-78 | -8.615850e-47 |
| Msa0564950 | Msa0657380 | 0.818199 | 2.220306e-52 | -8.615850e-47 |
| Msa0565260 | Msa0657380 | 0.892901 | 1.034500e-74 | -8.615850e-47 |
| Msa0580580 | Msa0657380 | 0.847736 | 9.575877e-60 | -8.615850e-47 |
| Msa0602110 | Msa0657380 | 0.906057 | 2.227714e-80 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0657380 | MtrunA17_Chr8g0379631 | 95.469 | 309 | 13 | 1 | 298 | 605 | 8 | 316 | 3.00e-179 | 509 |
| Msa0657380 | MtrunA17_Chr8g0379631 | 90.190 | 316 | 14 | 4 | 1 | 299 | 1 | 316 | 8.73e-165 | 472 |
| Msa0657380 | MtrunA17_Chr8g0379621 | 93.851 | 309 | 18 | 1 | 298 | 605 | 8 | 316 | 1.85e-176 | 502 |
| Msa0657380 | MtrunA17_Chr8g0379621 | 90.823 | 316 | 12 | 4 | 1 | 299 | 1 | 316 | 5.95e-167 | 478 |
| Msa0657380 | MtrunA17_Chr2g0284451 | 61.165 | 309 | 77 | 8 | 305 | 602 | 15 | 291 | 3.97e-102 | 311 |
| Msa0657380 | MtrunA17_Chr2g0284451 | 58.013 | 312 | 74 | 10 | 15 | 300 | 15 | 295 | 2.76e-90 | 281 |
| Msa0657380 | MtrunA17_Chr4g0029501 | 51.172 | 256 | 95 | 8 | 298 | 546 | 6 | 238 | 2.04e-65 | 216 |
| Msa0657380 | MtrunA17_Chr4g0029501 | 49.805 | 257 | 89 | 9 | 4 | 240 | 2 | 238 | 6.62e-60 | 201 |
| Msa0657380 | MtrunA17_Chr4g0026611 | 51.172 | 256 | 99 | 9 | 305 | 555 | 16 | 250 | 7.27e-63 | 209 |
| Msa0657380 | MtrunA17_Chr4g0026611 | 48.864 | 264 | 96 | 10 | 6 | 249 | 6 | 250 | 8.30e-59 | 198 |
| Msa0657380 | MtrunA17_Chr4g0029441 | 49.402 | 251 | 101 | 9 | 361 | 605 | 53 | 283 | 9.95e-63 | 209 |
| Msa0657380 | MtrunA17_Chr4g0029441 | 49.789 | 237 | 80 | 8 | 23 | 240 | 22 | 238 | 6.45e-56 | 191 |
| Msa0657380 | MtrunA17_Chr2g0284411 | 59.563 | 183 | 65 | 5 | 383 | 564 | 68 | 242 | 1.90e-58 | 197 |
| Msa0657380 | MtrunA17_Chr2g0284411 | 48.214 | 224 | 85 | 8 | 85 | 293 | 68 | 275 | 8.77e-49 | 171 |
| Msa0657380 | MtrunA17_Chr2g0326411 | 42.951 | 305 | 143 | 8 | 303 | 602 | 10 | 288 | 2.55e-58 | 197 |
| Msa0657380 | MtrunA17_Chr2g0326411 | 41.118 | 304 | 136 | 10 | 13 | 297 | 10 | 289 | 2.70e-50 | 176 |
| Msa0657380 | MtrunA17_Chr2g0284431 | 52.232 | 224 | 90 | 5 | 383 | 605 | 89 | 296 | 5.45e-58 | 196 |
| Msa0657380 | MtrunA17_Chr2g0284431 | 47.556 | 225 | 93 | 7 | 85 | 300 | 89 | 297 | 1.26e-48 | 171 |
| Msa0657380 | MtrunA17_Chr4g0029331 | 62.011 | 179 | 58 | 5 | 357 | 534 | 41 | 210 | 5.53e-58 | 195 |
| Msa0657380 | MtrunA17_Chr4g0029331 | 50.442 | 226 | 57 | 8 | 13 | 228 | 30 | 210 | 3.44e-50 | 174 |
| Msa0657380 | MtrunA17_Chr2g0326421 | 43.945 | 289 | 125 | 8 | 284 | 571 | 1 | 253 | 7.58e-56 | 190 |
| Msa0657380 | MtrunA17_Chr2g0326421 | 50.000 | 220 | 93 | 7 | 55 | 265 | 42 | 253 | 1.80e-48 | 171 |
| Msa0657380 | MtrunA17_Chr2g0326431 | 57.222 | 180 | 72 | 3 | 356 | 534 | 14 | 189 | 6.72e-55 | 186 |
| Msa0657380 | MtrunA17_Chr2g0326431 | 58.170 | 153 | 51 | 5 | 85 | 228 | 41 | 189 | 7.70e-46 | 162 |
| Msa0657380 | MtrunA17_Chr4g0029431 | 57.921 | 202 | 68 | 8 | 332 | 532 | 29 | 214 | 1.02e-53 | 184 |
| Msa0657380 | MtrunA17_Chr4g0029431 | 54.639 | 194 | 71 | 8 | 42 | 226 | 29 | 214 | 4.78e-43 | 155 |
| Msa0657380 | MtrunA17_Chr8g0379611 | 43.729 | 295 | 142 | 10 | 312 | 604 | 16 | 288 | 1.33e-52 | 182 |
| Msa0657380 | MtrunA17_Chr8g0379611 | 41.667 | 300 | 150 | 11 | 22 | 310 | 16 | 301 | 3.05e-45 | 162 |
| Msa0657380 | MtrunA17_Chr7g0263981 | 51.266 | 158 | 70 | 4 | 377 | 532 | 35 | 187 | 1.12e-42 | 154 |
| Msa0657380 | MtrunA17_Chr7g0263981 | 46.835 | 158 | 69 | 6 | 79 | 226 | 35 | 187 | 3.06e-33 | 128 |
| Msa0657380 | MtrunA17_Chr2g0325021 | 42.458 | 179 | 93 | 6 | 356 | 532 | 14 | 184 | 4.09e-28 | 113 |
| Msa0657380 | MtrunA17_Chr2g0325021 | 38.854 | 157 | 82 | 6 | 79 | 226 | 33 | 184 | 1.29e-19 | 88.6 |
| Msa0657380 | MtrunA17_Chr5g0448001 | 31.977 | 172 | 113 | 2 | 382 | 553 | 47 | 214 | 1.30e-17 | 83.2 |
| Msa0657380 | MtrunA17_Chr5g0448001 | 29.651 | 172 | 109 | 4 | 84 | 247 | 47 | 214 | 1.77e-11 | 65.1 |
| Msa0657380 | MtrunA17_Chr7g0246041 | 32.812 | 192 | 106 | 6 | 364 | 545 | 165 | 343 | 2.00e-15 | 79.0 |
| Msa0657380 | MtrunA17_Chr2g0296571 | 30.769 | 156 | 97 | 4 | 382 | 532 | 194 | 343 | 5.73e-13 | 71.2 |
| Msa0657380 | MtrunA17_Chr5g0448211 | 30.978 | 184 | 103 | 7 | 366 | 545 | 188 | 351 | 1.61e-11 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0657380 | AT5G03170.1 | 51.579 | 190 | 81 | 6 | 361 | 548 | 18 | 198 | 1.35e-50 | 175 |
| Msa0657380 | AT5G03170.1 | 46.231 | 199 | 78 | 8 | 54 | 242 | 19 | 198 | 1.72e-40 | 148 |
| Msa0657380 | AT5G60490.1 | 57.718 | 149 | 57 | 3 | 383 | 529 | 39 | 183 | 1.24e-46 | 165 |
| Msa0657380 | AT5G60490.1 | 52.448 | 143 | 57 | 4 | 85 | 220 | 39 | 177 | 7.53e-36 | 135 |
| Msa0657380 | AT2G20520.1 | 41.451 | 193 | 103 | 6 | 356 | 545 | 15 | 200 | 3.87e-30 | 119 |
| Msa0657380 | AT2G20520.1 | 38.947 | 190 | 96 | 7 | 66 | 239 | 15 | 200 | 9.19e-23 | 98.2 |
| Msa0657380 | AT5G44130.1 | 40.719 | 167 | 92 | 4 | 382 | 545 | 35 | 197 | 1.20e-26 | 109 |
| Msa0657380 | AT5G44130.1 | 38.922 | 167 | 87 | 7 | 84 | 239 | 35 | 197 | 2.15e-20 | 91.3 |
| Msa0657380 | AT1G03870.1 | 34.842 | 221 | 123 | 6 | 382 | 600 | 38 | 239 | 3.81e-26 | 107 |
| Msa0657380 | AT1G03870.1 | 34.021 | 194 | 110 | 8 | 84 | 263 | 38 | 227 | 1.99e-18 | 85.5 |
| Msa0657380 | AT3G46550.1 | 31.492 | 181 | 113 | 4 | 370 | 545 | 194 | 368 | 8.43e-17 | 83.6 |
| Msa0657380 | AT3G60900.1 | 31.111 | 180 | 113 | 3 | 383 | 560 | 190 | 360 | 3.13e-12 | 69.3 |
| Msa0657380 | AT2G04780.1 | 31.333 | 150 | 95 | 4 | 382 | 529 | 45 | 188 | 7.47e-11 | 63.5 |
| Msa0657380 | AT2G04780.2 | 31.333 | 150 | 95 | 4 | 382 | 529 | 45 | 188 | 7.47e-11 | 63.5 |
Find 173 sgRNAs with CRISPR-Local
Find 374 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGTCAATGGTGGGTCCTTT+TGG | 0.235120 | 4_3:-67019794 | None:intergenic |
| ATGTCAATGGTGGGTCCTTT+TGG | 0.235120 | 4_3:-67023087 | None:intergenic |
| GCCTCTTGATCTTGTTCTTC+CGG | 0.272392 | 4_3:+67020249 | Msa0657380:CDS |
| GCCTCTTGATCTTGTTCTTC+CGG | 0.272392 | 4_3:+67023542 | Msa0657380:CDS |
| TAGCAAACTTGCTATTTATC+AGG | 0.275231 | 4_3:+67020210 | Msa0657380:CDS |
| TAGCAAACTTGCTATTTATC+AGG | 0.275231 | 4_3:+67023503 | Msa0657380:CDS |
| GGTGCTGTTGCTGTTGTTGC+TGG | 0.314474 | 4_3:-67019698 | None:intergenic |
| GGTGCTGTTGCTGTTGTTGC+TGG | 0.314474 | 4_3:-67022991 | None:intergenic |
| CCTGCTGATGTTTCTGCTGC+AGG | 0.329762 | 4_3:+67020397 | Msa0657380:CDS |
| GTTGCTGTTGTTGCTGGTAA+TGG | 0.333085 | 4_3:-67019692 | None:intergenic |
| GTTGCTGTTGTTGCTGGTAA+TGG | 0.333085 | 4_3:-67022985 | None:intergenic |
| GAGGAACCCTGCTTTGAGTT+TGG | 0.336926 | 4_3:-67019969 | None:intergenic |
| GAGGAACCCTGCTTTGAGTT+TGG | 0.336926 | 4_3:-67023262 | None:intergenic |
| AATTAGAACGGAAAACCTTT+TGG | 0.343872 | 4_3:-67019837 | None:intergenic |
| AGAGTTGGGCTAATGTGGTT+GGG | 0.351783 | 4_3:-67022897 | None:intergenic |
| GGGTGGAATTGGTGAGAGTT+GGG | 0.354472 | 4_3:-67019618 | None:intergenic |
| GCAGTTAATGCTACCGTTAC+TGG | 0.358591 | 4_3:+67023465 | Msa0657380:CDS |
| TTGGAGAATGCAGAATCTTC+TGG | 0.359282 | 4_3:-67019950 | None:intergenic |
| TTGGAGAATGCAGAATCTTC+TGG | 0.359282 | 4_3:-67023243 | None:intergenic |
| GTTGGTGGAGTTGTTCTATA+AGG | 0.359667 | 4_3:+67023756 | Msa0657380:CDS |
| GTGAGGGTGATGATATTATT+GGG | 0.360150 | 4_3:-67022933 | None:intergenic |
| CCTGCTGATGTTTCTGCTGC+AGG | 0.360987 | 4_3:+67023690 | Msa0657380:CDS |
| GGTGAGGGTGATGATATTAT+TGG | 0.361655 | 4_3:-67022934 | None:intergenic |
| TTTGGCTCCTGCACCGGCTA+AGG | 0.362528 | 4_3:+67023578 | Msa0657380:CDS |
| CAGTGGCAATCAAGTTAGTA+TGG | 0.363282 | 4_3:+67023434 | Msa0657380:CDS |
| TCCGGCTAAGGCTCCAGCTT+TGG | 0.363612 | 4_3:+67023560 | Msa0657380:CDS |
| GCAGTTAATGCTACCGTTAC+CGG | 0.364782 | 4_3:+67020172 | Msa0657380:CDS |
| TCACCGGCTTGTGTTTGAAC+AGG | 0.366430 | 4_3:-67020085 | None:intergenic |
| TCACCGGCTTGTGTTTGAAC+AGG | 0.366430 | 4_3:-67023378 | None:intergenic |
| GAGAGTTGGGCTAATGTGGT+TGG | 0.368809 | 4_3:-67022898 | None:intergenic |
| GGGGTGGAATTGGTGAGAGT+TGG | 0.379400 | 4_3:-67019619 | None:intergenic |
| GTTAACCCTCCTGAACTTGA+TGG | 0.380393 | 4_3:-67019917 | None:intergenic |
| GGTTTGAATTGGTGAGAGTT+GGG | 0.383872 | 4_3:-67022911 | None:intergenic |
| CGGTGGCAGTCAAGTTAGTA+TGG | 0.391071 | 4_3:+67020141 | Msa0657380:CDS |
| TCTGGCTCCGGCGCCAGCTA+AGG | 0.394000 | 4_3:+67020285 | Msa0657380:CDS |
| TGCTATTTATCAGGTTGATA+AGG | 0.394299 | 4_3:+67023512 | Msa0657380:CDS |
| AATTAGAACGGAGAACCTTT+TGG | 0.395304 | 4_3:-67023130 | None:intergenic |
| TTTGGAATGGGTTTGGTTGG+TGG | 0.406116 | 4_3:+67023741 | Msa0657380:CDS |
| GATATTATTGGGGTTTGAAT+TGG | 0.407729 | 4_3:-67022922 | None:intergenic |
| TGCTGCAGGGTCTGTGATGT+GGG | 0.418106 | 4_3:+67020411 | Msa0657380:CDS |
| GGGTTTGAATTGGTGAGAGT+TGG | 0.418341 | 4_3:-67022912 | None:intergenic |
| GGTGCACCAGTTGGTGTTGT+TGG | 0.418778 | 4_3:-67023045 | None:intergenic |
| TGATCTTGTTCTTCCGGCTA+AGG | 0.420269 | 4_3:+67020255 | Msa0657380:CDS |
| TGATCTTGTTCTTCCGGCTA+AGG | 0.420269 | 4_3:+67023548 | Msa0657380:CDS |
| GTATCATCGCCATCAAGTTC+AGG | 0.420444 | 4_3:+67019908 | Msa0657380:CDS |
| TCCGGCTAAGGCTCCATCTC+TGG | 0.421914 | 4_3:+67020267 | Msa0657380:CDS |
| GCCGGTGCAGGAGCCAAAGC+TGG | 0.431263 | 4_3:-67023573 | None:intergenic |
| GGTGCACCAGTTGGTGTTGT+TGG | 0.431617 | 4_3:-67019752 | None:intergenic |
| GGTGATGGAGATGATGTTGT+AGG | 0.435283 | 4_3:-67019641 | None:intergenic |
| TGTTTGAACAGGGTTGGTTA+AGG | 0.439720 | 4_3:-67020074 | None:intergenic |
| TGTTTGAACAGGGTTGGTTA+AGG | 0.439720 | 4_3:-67023367 | None:intergenic |
| CTGCTGCAGGATCTGTGCAT+TGG | 0.442652 | 4_3:+67023703 | Msa0657380:CDS |
| AAGGGTTTGTTGCCTAAGGC+TGG | 0.443081 | 4_3:+67020304 | Msa0657380:CDS |
| AAGGGTTTGTTGCCTAAGGC+TGG | 0.443081 | 4_3:+67023597 | Msa0657380:CDS |
| GTATCATCACCATCAGGTTC+AGG | 0.443291 | 4_3:+67023201 | Msa0657380:CDS |
| CTTGTTCCAACAACACCAAC+TGG | 0.444147 | 4_3:+67023039 | Msa0657380:CDS |
| GGTGGTGATGCTGTTGTTGA+TGG | 0.445870 | 4_3:-67019671 | None:intergenic |
| GGTGGTGATGCTGTTGTTGA+TGG | 0.445870 | 4_3:-67022964 | None:intergenic |
| TGATGCTGTTGTTGATGGTA+AGG | 0.449757 | 4_3:-67019666 | None:intergenic |
| TGATGCTGTTGTTGATGGTA+AGG | 0.449757 | 4_3:-67022959 | None:intergenic |
| CTGGCTCCGGCGCCAGCTAA+GGG | 0.452323 | 4_3:+67020286 | Msa0657380:CDS |
| CTGCTGCAGGGTCTGTGATG+TGG | 0.454235 | 4_3:+67020410 | Msa0657380:CDS |
| AAGAATGTTGATTATGTCAA+TGG | 0.455371 | 4_3:-67019807 | None:intergenic |
| AAGAATGTTGATTATGTCAA+TGG | 0.455371 | 4_3:-67023100 | None:intergenic |
| CAACTGAACGTCACTACTTA+CGG | 0.460289 | 4_3:+67020121 | Msa0657380:CDS |
| AGCTAAGGGTTTGTTGCCTA+AGG | 0.460321 | 4_3:+67020300 | Msa0657380:CDS |
| GTGATGGAGATGATGTTGTA+GGG | 0.461192 | 4_3:-67019640 | None:intergenic |
| TTGGCTCCTGCACCGGCTAA+GGG | 0.463641 | 4_3:+67023579 | Msa0657380:CDS |
| AACAAACCCTTAGCCGGTGC+AGG | 0.463951 | 4_3:-67023585 | None:intergenic |
| TGAGGGTGATGATATTATTG+GGG | 0.465251 | 4_3:-67022932 | None:intergenic |
| GCATTCTCCAAACTCAAAGC+AGG | 0.466381 | 4_3:+67019962 | Msa0657380:CDS |
| GCATTCTCCAAACTCAAAGC+AGG | 0.466381 | 4_3:+67023255 | Msa0657380:CDS |
| GGCTAAGGGTTTGTTGCCTA+AGG | 0.468336 | 4_3:+67023593 | Msa0657380:CDS |
| AATTCTTCGGTTGTAGATGA+TGG | 0.470488 | 4_3:+67023627 | Msa0657380:CDS |
| GAGTTGGGCTAATGTGGTTG+GGG | 0.472510 | 4_3:-67022896 | None:intergenic |
| CTTGTTCCAACAACACCAAC+TGG | 0.476196 | 4_3:+67019746 | Msa0657380:CDS |
| GTAGATGATGGTAGCGGTGC+TGG | 0.479324 | 4_3:+67023639 | Msa0657380:CDS |
| CTGCTGATGTTTCTGCTGCA+GGG | 0.487153 | 4_3:+67020398 | Msa0657380:CDS |
| TCCAGCTTTGGCTCCTGCAC+CGG | 0.487588 | 4_3:+67023572 | Msa0657380:CDS |
| TGGTGAGAGTTGGGCTAAAG+TGG | 0.489699 | 4_3:-67019609 | None:intergenic |
| TTAGGCAACAAACCCTTAGC+TGG | 0.492766 | 4_3:-67020298 | None:intergenic |
| GTCTATCAGTGAGGGAGTTG+AGG | 0.498053 | 4_3:-67019988 | None:intergenic |
| GTCTATCAGTGAGGGAGTTG+AGG | 0.498053 | 4_3:-67023281 | None:intergenic |
| AACAAACCCTTAGCTGGCGC+CGG | 0.504015 | 4_3:-67020292 | None:intergenic |
| AGCGGAACTGTGCTTAATCC+TGG | 0.504963 | 4_3:-67023018 | None:intergenic |
| TGGTGAGAGTTGGGCTAATG+TGG | 0.506138 | 4_3:-67022902 | None:intergenic |
| GGCTTGTGTTTGAACAGGGT+TGG | 0.506531 | 4_3:-67020080 | None:intergenic |
| GGCTTGTGTTTGAACAGGGT+TGG | 0.506531 | 4_3:-67023373 | None:intergenic |
| GTTGATGGTAAGGGTGGTGA+GGG | 0.507310 | 4_3:-67022949 | None:intergenic |
| CACCGGCTTGTGTTTGAACA+GGG | 0.508119 | 4_3:-67020084 | None:intergenic |
| CACCGGCTTGTGTTTGAACA+GGG | 0.508119 | 4_3:-67023377 | None:intergenic |
| ATACTAGCTGCGAGTTGAGT+TGG | 0.509205 | 4_3:-67023182 | None:intergenic |
| GTAGACGATGGCAGTGGTGC+TGG | 0.509847 | 4_3:+67020346 | Msa0657380:CDS |
| GCCAAAGCTGGAGCCTTAGC+CGG | 0.517768 | 4_3:-67023561 | None:intergenic |
| GCCAGAGATGGAGCCTTAGC+CGG | 0.520251 | 4_3:-67020268 | None:intergenic |
| GCTGGCGCCGGAGCCAGAGA+TGG | 0.521879 | 4_3:-67020280 | None:intergenic |
| AACGGTAGCATTAACTGCTC+CGG | 0.527378 | 4_3:-67023460 | None:intergenic |
| TGTTGATGGTAAGGGTGGTG+AGG | 0.528646 | 4_3:-67022950 | None:intergenic |
| CAGCTAGTATCATCACCATC+AGG | 0.530331 | 4_3:+67023195 | Msa0657380:CDS |
| TAAGGCTCCATCTCTGGCTC+CGG | 0.530879 | 4_3:+67020273 | Msa0657380:CDS |
| CCCACCAAAGCAATCCCAAA+AGG | 0.532318 | 4_3:+67023072 | Msa0657380:CDS |
| AACGGTAGCATTAACTGCTC+CGG | 0.540707 | 4_3:-67020167 | None:intergenic |
| AAATAGAAACAAACGAAGCA+AGG | 0.540997 | 4_3:-67023332 | None:intergenic |
| AGTGGAACTGTGCTTAATCC+TGG | 0.544466 | 4_3:-67019725 | None:intergenic |
| TGATGGAGATGATGTTGTAG+GGG | 0.546507 | 4_3:-67019639 | None:intergenic |
| TTTGGAATGAGTTTGGTTGG+TGG | 0.550464 | 4_3:+67020448 | Msa0657380:CDS |
| AGTGGTGCTGGTAGTGATGA+TGG | 0.554877 | 4_3:+67020358 | Msa0657380:CDS |
| GTTGGTGTTGTTGGAACAAG+TGG | 0.555566 | 4_3:-67019743 | None:intergenic |
| AGCGGTGCTGGCAGTGATGA+TGG | 0.560075 | 4_3:+67023651 | Msa0657380:CDS |
| GTTGATGGTAAGGGTGGTGA+TGG | 0.560733 | 4_3:-67019656 | None:intergenic |
| TTAGGCAACAAACCCTTAGC+CGG | 0.560846 | 4_3:-67023591 | None:intergenic |
| CCCACCATAACAGTCCCAAA+AGG | 0.562203 | 4_3:+67019779 | Msa0657380:intron |
| ATAAATAGCAAGTTTGCTAT+CGG | 0.562446 | 4_3:-67020206 | None:intergenic |
| ATAAATAGCAAGTTTGCTAT+CGG | 0.562446 | 4_3:-67023499 | None:intergenic |
| ATACTAGCTGCGAGTTGAGT+TGG | 0.564006 | 4_3:-67019889 | None:intergenic |
| GGTATAAACAGTACCGGTAA+CGG | 0.565166 | 4_3:-67020185 | None:intergenic |
| TTTGAGAAGCCGAATTAGAA+CGG | 0.569636 | 4_3:-67019849 | None:intergenic |
| GTTGGTGTTGTTGGAACAAG+CGG | 0.574823 | 4_3:-67023036 | None:intergenic |
| AACCCTGTTCAAACACAAGC+CGG | 0.576254 | 4_3:+67020082 | Msa0657380:CDS |
| AACCCTGTTCAAACACAAGC+CGG | 0.576254 | 4_3:+67023375 | Msa0657380:CDS |
| AATTGCTAGAAGAAAGAATG+AGG | 0.576326 | 4_3:-67022863 | None:intergenic |
| AATTGCTAGAAGAAGAAATG+AGG | 0.579432 | 4_3:-67019570 | None:intergenic |
| GCTGTTGTTGATGGTAAGGG+TGG | 0.581658 | 4_3:-67019662 | None:intergenic |
| GCTGTTGTTGATGGTAAGGG+TGG | 0.581658 | 4_3:-67022955 | None:intergenic |
| GCTGTTGTTGCTGGTAATGG+TGG | 0.582499 | 4_3:-67019689 | None:intergenic |
| GCTGTTGTTGCTGGTAATGG+TGG | 0.582499 | 4_3:-67022982 | None:intergenic |
| TGCTAGAAGAAGAAATGAGG+TGG | 0.583738 | 4_3:-67019567 | None:intergenic |
| CACAAGCCGGTGATGATGCT+AGG | 0.584174 | 4_3:+67020095 | Msa0657380:CDS |
| CACAAGCCGGTGATGATGCT+AGG | 0.584174 | 4_3:+67023388 | Msa0657380:CDS |
| GATGGAGATGATGTTGTAGG+GGG | 0.584616 | 4_3:-67019638 | None:intergenic |
| GAGTTGGGCTAAAGTGGTGG+AGG | 0.587512 | 4_3:-67019603 | None:intergenic |
| TGAGAGTTGGGCTAAAGTGG+TGG | 0.590350 | 4_3:-67019606 | None:intergenic |
| TCGGTTGTAGACGATGGCAG+TGG | 0.591876 | 4_3:+67020340 | Msa0657380:CDS |
| AATCAAGTTAGTATGGCTAC+CGG | 0.593663 | 4_3:+67023441 | Msa0657380:CDS |
| TCGGTTGTAGATGATGGTAG+CGG | 0.599850 | 4_3:+67023633 | Msa0657380:CDS |
| ACAGCAACAGCACCATCACC+AGG | 0.599988 | 4_3:+67019707 | Msa0657380:CDS |
| ACAGCAACAGCACCATCACC+AGG | 0.599988 | 4_3:+67023000 | Msa0657380:CDS |
| AGTCAAGTTAGTATGGCTAC+CGG | 0.601147 | 4_3:+67020148 | Msa0657380:CDS |
| ACTGTGCTTAATCCTGGTGA+TGG | 0.604248 | 4_3:-67019719 | None:intergenic |
| GATGCTGTTGTTGATGGTAA+GGG | 0.606751 | 4_3:-67019665 | None:intergenic |
| GATGCTGTTGTTGATGGTAA+GGG | 0.606751 | 4_3:-67022958 | None:intergenic |
| GCTATCGGTATAAACAGTAC+CGG | 0.606873 | 4_3:-67020191 | None:intergenic |
| CCTGCAGCAGAAACATCAGC+AGG | 0.607919 | 4_3:-67023690 | None:intergenic |
| TCATCACCATCAGGTTCAGG+AGG | 0.610251 | 4_3:+67023204 | Msa0657380:CDS |
| CATTCTCCAAACTCAAAGCA+GGG | 0.610410 | 4_3:+67019963 | Msa0657380:CDS |
| CATTCTCCAAACTCAAAGCA+GGG | 0.610410 | 4_3:+67023256 | Msa0657380:CDS |
| TTTGAGAAGACGAATTAGAA+CGG | 0.612652 | 4_3:-67023142 | None:intergenic |
| GCCGGAAGAACAAGATCAAG+AGG | 0.613702 | 4_3:-67020250 | None:intergenic |
| GCCGGAAGAACAAGATCAAG+AGG | 0.613702 | 4_3:-67023543 | None:intergenic |
| CCTGCAGCAGAAACATCAGC+AGG | 0.614736 | 4_3:-67020397 | None:intergenic |
| AATGTTGATTATGTCAATGG+TGG | 0.616748 | 4_3:-67019804 | None:intergenic |
| AATGTTGATTATGTCAATGG+TGG | 0.616748 | 4_3:-67023097 | None:intergenic |
| AATAGAAACAAACGAAGCAA+GGG | 0.620497 | 4_3:-67023331 | None:intergenic |
| TTGAAGCCTAGCATCATCAC+CGG | 0.621788 | 4_3:-67020101 | None:intergenic |
| TTGAAGCCTAGCATCATCAC+CGG | 0.621788 | 4_3:-67023394 | None:intergenic |
| TGCTAGAAGAAAGAATGAGG+TGG | 0.621900 | 4_3:-67022860 | None:intergenic |
| TCATCGCCATCAAGTTCAGG+AGG | 0.622735 | 4_3:+67019911 | Msa0657380:CDS |
| CAGTGATGATGGTGATGGAA+AGG | 0.627687 | 4_3:+67023662 | Msa0657380:CDS |
| ACTGTGCTTAATCCTGGTGA+TGG | 0.634396 | 4_3:-67023012 | None:intergenic |
| AAATCGAAACGAATGAAGCG+AGG | 0.637672 | 4_3:-67020039 | None:intergenic |
| GGTATAAACAGTACCAGTAA+CGG | 0.640082 | 4_3:-67023478 | None:intergenic |
| GCTGGCAGTGATGATGGTGA+TGG | 0.645590 | 4_3:+67023657 | Msa0657380:CDS |
| AATCGAAACGAATGAAGCGA+GGG | 0.648536 | 4_3:-67020038 | None:intergenic |
| GTTAACCCTCCTGAACCTGA+TGG | 0.664853 | 4_3:-67023210 | None:intergenic |
| TAGTGATGATGGTGATGGCA+AGG | 0.668905 | 4_3:+67020369 | Msa0657380:CDS |
| AATTCATCGGTTGTAGACGA+TGG | 0.674617 | 4_3:+67020334 | Msa0657380:CDS |
| GCTGGTAGTGATGATGGTGA+TGG | 0.674633 | 4_3:+67020364 | Msa0657380:CDS |
| CTGAACGTCACTACTTACAG+TGG | 0.677815 | 4_3:+67023417 | Msa0657380:CDS |
| ATGTTGATTATGTCAATGGT+GGG | 0.681774 | 4_3:-67019803 | None:intergenic |
| ATGTTGATTATGTCAATGGT+GGG | 0.681774 | 4_3:-67023096 | None:intergenic |
| CATCACCATCAGGTTCAGGA+GGG | 0.700637 | 4_3:+67023205 | Msa0657380:CDS |
| CATCGCCATCAAGTTCAGGA+GGG | 0.702614 | 4_3:+67019912 | Msa0657380:CDS |
| CTGAACGTCACTACTTACGG+TGG | 0.722980 | 4_3:+67020124 | Msa0657380:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGTTTATGAATAAATTAAAT+TGG | + | chr4_3:67021549-67021568 | Msa0657380:intron | 10.0% |
| !!! | TGTAATTTGTATTTCTTTTA+TGG | + | chr4_3:67020683-67020702 | Msa0657380:intron | 15.0% |
| !! | AAAAGAATCTAATTTATACA+TGG | + | chr4_3:67020743-67020762 | Msa0657380:intron | 15.0% |
| !! | CAAAATTTATTGATAAAAAG+AGG | - | chr4_3:67021504-67021523 | None:intergenic | 15.0% |
| !! | ATCTTATTAAGATATCAATT+TGG | + | chr4_3:67022014-67022033 | Msa0657380:intron | 15.0% |
| !!! | AAATTAATGATTGGTTAATT+AGG | - | chr4_3:67022689-67022708 | None:intergenic | 15.0% |
| !!! | TTTTTTTAGTTGTGATTTTG+AGG | + | chr4_3:67020523-67020542 | Msa0657380:intron | 20.0% |
| !!! | GTATTTCTTTTATGGATTAT+TGG | + | chr4_3:67020691-67020710 | Msa0657380:intron | 20.0% |
| !! | AAGAATCTAATTTATACATG+AGG | + | chr4_3:67020745-67020764 | Msa0657380:intron | 20.0% |
| !! | AGAATCTAATTTATACATGA+GGG | + | chr4_3:67020746-67020765 | Msa0657380:intron | 20.0% |
| !! | AAAATGAAAATCTACAAAGA+TGG | + | chr4_3:67021275-67021294 | Msa0657380:intron | 20.0% |
| !!! | TTGGTTTTTAGGTAAAAATT+CGG | + | chr4_3:67021335-67021354 | Msa0657380:intron | 20.0% |
| !!! | ATAGAGTTAGAACTAAATTT+TGG | + | chr4_3:67021416-67021435 | Msa0657380:intron | 20.0% |
| !! | AAATCATTGAACTTAACTAT+GGG | + | chr4_3:67021747-67021766 | Msa0657380:intron | 20.0% |
| !! | TCCTAATTTGACATAATTTA+TGG | + | chr4_3:67022110-67022129 | Msa0657380:intron | 20.0% |
| !!! | ATCATAATTAGATAACTTGT+CGG | - | chr4_3:67022287-67022306 | None:intergenic | 20.0% |
| !!! | TTGATTTCTTCTTTTATTTC+AGG | + | chr4_3:67022334-67022353 | Msa0657380:intron | 20.0% |
| !! | TACATATTAATACACCTTAT+AGG | + | chr4_3:67022523-67022542 | Msa0657380:intron | 20.0% |
| !!! | GCATCATATTTTTCATTTTT+GGG | - | chr4_3:67022825-67022844 | None:intergenic | 20.0% |
| !!! | TGCATCATATTTTTCATTTT+TGG | - | chr4_3:67022826-67022845 | None:intergenic | 20.0% |
| !! | AAGAATGTTGATTATGTCAA+TGG | - | chr4_3:67019810-67019829 | None:intergenic | 25.0% |
| !!! | ATAAATAGCAAGTTTGCTAT+CGG | - | chr4_3:67020209-67020228 | None:intergenic | 25.0% |
| ! | GGATGAATAAACAATATTGA+TGG | + | chr4_3:67020487-67020506 | Msa0657380:intron | 25.0% |
| !! | TGCTATTTGTTTGTAGAATA+GGG | + | chr4_3:67020596-67020615 | Msa0657380:intron | 25.0% |
| ! | ATTACAAGTTACCAAACAAA+AGG | - | chr4_3:67020669-67020688 | None:intergenic | 25.0% |
| ! | GAATCTAATTTATACATGAG+GGG | + | chr4_3:67020747-67020766 | Msa0657380:intron | 25.0% |
| ! | AATTTATACATGGTTATGCT+AGG | + | chr4_3:67020808-67020827 | Msa0657380:intron | 25.0% |
| ! | ATTTATACATGGTTATGCTA+GGG | + | chr4_3:67020809-67020828 | Msa0657380:intron | 25.0% |
| ! | ATAAAGATAAAAGGAGATCA+CGG | - | chr4_3:67020861-67020880 | None:intergenic | 25.0% |
| ! | GTTGCTAAGATAAAGATAAA+AGG | - | chr4_3:67020870-67020889 | None:intergenic | 25.0% |
| ! | TTATCTTTATCTTAGCAACA+AGG | + | chr4_3:67020871-67020890 | Msa0657380:intron | 25.0% |
| !!! | GATTTTTTCTTGTAGAAAGA+TGG | - | chr4_3:67021000-67021019 | None:intergenic | 25.0% |
| ! | TATGAAAATTTCAAATGCCT+TGG | + | chr4_3:67021107-67021126 | Msa0657380:intron | 25.0% |
| !! | ATATTGACTATTTGGGAAAT+TGG | + | chr4_3:67021223-67021242 | Msa0657380:intron | 25.0% |
| !!! | TGGTTTTTAGGTAAAAATTC+GGG | + | chr4_3:67021336-67021355 | Msa0657380:intron | 25.0% |
| ! | TTCCAATAGATTATATGCTA+AGG | + | chr4_3:67021391-67021410 | Msa0657380:intron | 25.0% |
| !!! | TAGAACTAAATTTTGGTTGA+AGG | + | chr4_3:67021423-67021442 | Msa0657380:intron | 25.0% |
| ! | GAAATCATTGAACTTAACTA+TGG | + | chr4_3:67021746-67021765 | Msa0657380:intron | 25.0% |
| ! | AATCATTGAACTTAACTATG+GGG | + | chr4_3:67021748-67021767 | Msa0657380:intron | 25.0% |
| ! | TTAATGTCCCTATTTAACAT+TGG | + | chr4_3:67021941-67021960 | Msa0657380:intron | 25.0% |
| ! | TAATGTCCCTATTTAACATT+GGG | + | chr4_3:67021942-67021961 | Msa0657380:intron | 25.0% |
| ! | TTATTCCCCAATGTTAAATA+GGG | - | chr4_3:67021951-67021970 | None:intergenic | 25.0% |
| ! | TTTATTCCCCAATGTTAAAT+AGG | - | chr4_3:67021952-67021971 | None:intergenic | 25.0% |
| ! | ACTAACATAATGAAGAATTG+AGG | + | chr4_3:67021975-67021994 | Msa0657380:intron | 25.0% |
| ! | GCCATAAATTATGTCAAATT+AGG | - | chr4_3:67022114-67022133 | None:intergenic | 25.0% |
| ! | TGAATGTGATTATACATTGA+TGG | + | chr4_3:67022135-67022154 | Msa0657380:intron | 25.0% |
| ! | CATCTATTCAAAAACTTTCA+AGG | - | chr4_3:67022190-67022209 | None:intergenic | 25.0% |
| !! | CTTGAAAGTTTTTGAATAGA+TGG | + | chr4_3:67022188-67022207 | Msa0657380:intron | 25.0% |
| ! | ATTAGAAGATGCGTTTAATT+AGG | - | chr4_3:67022389-67022408 | None:intergenic | 25.0% |
| ! | ATAGTATTGTAACTGATAAG+TGG | - | chr4_3:67022589-67022608 | None:intergenic | 25.0% |
| !! | AAGAATGTTGATTATGTCAA+TGG | - | chr4_3:67019810-67019829 | None:intergenic | 25.0% |
| !!! | ATAAATAGCAAGTTTGCTAT+CGG | - | chr4_3:67020209-67020228 | None:intergenic | 25.0% |
| !!! | AATGTTGTTGTTTTTGGAAT+GGG | + | chr4_3:67020436-67020455 | Msa0657380:CDS | 25.0% |
| AATTGCTAGAAGAAGAAATG+AGG | - | chr4_3:67019573-67019592 | None:intergenic | 30.0% | |
| ! | ATGTTGATTATGTCAATGGT+GGG | - | chr4_3:67019806-67019825 | None:intergenic | 30.0% |
| ! | AATGTTGATTATGTCAATGG+TGG | - | chr4_3:67019807-67019826 | None:intergenic | 30.0% |
| ACATTCTTCAAAAAGCCAAA+AGG | + | chr4_3:67019822-67019841 | Msa0657380:CDS | 30.0% | |
| ! | AATTAGAACGGAAAACCTTT+TGG | - | chr4_3:67019840-67019859 | None:intergenic | 30.0% |
| ! | AAAGGTTTTCCGTTCTAATT+CGG | + | chr4_3:67019840-67019859 | Msa0657380:CDS | 30.0% |
| ! | AACTTTTTGTCTATCAGTGA+GGG | - | chr4_3:67019999-67020018 | None:intergenic | 30.0% |
| !! | TAGCAAACTTGCTATTTATC+AGG | + | chr4_3:67020210-67020229 | Msa0657380:CDS | 30.0% |
| !! | TGCTATTTATCAGGTTGATA+AGG | + | chr4_3:67020219-67020238 | Msa0657380:intron | 30.0% |
| !!! | TGTTGTTTTTGGAATGAGTT+TGG | + | chr4_3:67020441-67020460 | Msa0657380:CDS | 30.0% |
| ! | CTGCTATTTGTTTGTAGAAT+AGG | + | chr4_3:67020595-67020614 | Msa0657380:intron | 30.0% |
| ! | TCCTATTTGTTCCTTTTGTT+TGG | + | chr4_3:67020655-67020674 | Msa0657380:intron | 30.0% |
| ACCAAACAAAAGGAACAAAT+AGG | - | chr4_3:67020659-67020678 | None:intergenic | 30.0% | |
| ! | TATAACCGAATTTTGTGACT+CGG | - | chr4_3:67020912-67020931 | None:intergenic | 30.0% |
| ACAAAATTCGGTTATAGCAA+AGG | + | chr4_3:67020916-67020935 | Msa0657380:intron | 30.0% | |
| ! | GTTAACCTTTTCTTAGCAAT+TGG | + | chr4_3:67020967-67020986 | Msa0657380:intron | 30.0% |
| CATAACCAATTGCTAAGAAA+AGG | - | chr4_3:67020975-67020994 | None:intergenic | 30.0% | |
| TTTACTAGCAAAATCACAAG+TGG | - | chr4_3:67021081-67021100 | None:intergenic | 30.0% | |
| ! | AGTTTGGCATATTGACTATT+TGG | + | chr4_3:67021215-67021234 | Msa0657380:intron | 30.0% |
| ! | GTTTGGCATATTGACTATTT+GGG | + | chr4_3:67021216-67021235 | Msa0657380:intron | 30.0% |
| ATGAAAATCTACAAAGATGG+CGG | + | chr4_3:67021278-67021297 | Msa0657380:intron | 30.0% | |
| ACTCGATAAAAGGTTTATCT+TGG | + | chr4_3:67021310-67021329 | Msa0657380:intron | 30.0% | |
| ! | TAAAAGGTTTATCTTGGTGT+TGG | + | chr4_3:67021316-67021335 | Msa0657380:intron | 30.0% |
| !!! | TTATCTTGGTGTTGGTTTTT+AGG | + | chr4_3:67021324-67021343 | Msa0657380:intron | 30.0% |
| AGTCATGTCATTACTATGAA+GGG | + | chr4_3:67021361-67021380 | Msa0657380:intron | 30.0% | |
| TGCCTTAGCATATAATCTAT+TGG | - | chr4_3:67021396-67021415 | None:intergenic | 30.0% | |
| AAGTGGTACTAAATTTCCAT+GGG | - | chr4_3:67021471-67021490 | None:intergenic | 30.0% | |
| ACAATGAAGAAGAAGAATGA+AGG | + | chr4_3:67021846-67021865 | Msa0657380:intron | 30.0% | |
| CAATGAAGAAGAAGAATGAA+GGG | + | chr4_3:67021847-67021866 | Msa0657380:intron | 30.0% | |
| ! | ATGAAGGGTTTCTTTCATTT+TGG | + | chr4_3:67021862-67021881 | Msa0657380:intron | 30.0% |
| AATGTCCCTATTTAACATTG+GGG | + | chr4_3:67021943-67021962 | Msa0657380:intron | 30.0% | |
| !!! | ACTTTTTGAGACTAAAACGT+TGG | + | chr4_3:67022048-67022067 | Msa0657380:intron | 30.0% |
| TTTACTCACATCTTCAAAGA+CGG | + | chr4_3:67022250-67022269 | Msa0657380:intron | 30.0% | |
| AGGTAAGATTTGTGTATGAT+AGG | - | chr4_3:67022560-67022579 | None:intergenic | 30.0% | |
| ! | TGCAATGCTTTTATCAGAAA+TGG | - | chr4_3:67022666-67022685 | None:intergenic | 30.0% |
| ! | CATTTTATATCTTAGGAGGA+TGG | - | chr4_3:67022712-67022731 | None:intergenic | 30.0% |
| ! | GTTGCATTTTATATCTTAGG+AGG | - | chr4_3:67022716-67022735 | None:intergenic | 30.0% |
| TTTGAACCGTTGTTTAGAAA+TGG | - | chr4_3:67022799-67022818 | None:intergenic | 30.0% | |
| AATTGCTAGAAGAAAGAATG+AGG | - | chr4_3:67022866-67022885 | None:intergenic | 30.0% | |
| GATATTATTGGGGTTTGAAT+TGG | - | chr4_3:67022925-67022944 | None:intergenic | 30.0% | |
| ! | ATGTTGATTATGTCAATGGT+GGG | - | chr4_3:67019806-67019825 | None:intergenic | 30.0% |
| ! | AATGTTGATTATGTCAATGG+TGG | - | chr4_3:67019807-67019826 | None:intergenic | 30.0% |
| ACATTCTTCAAAAAGCCAAA+AGG | + | chr4_3:67019822-67019841 | Msa0657380:CDS | 30.0% | |
| TTTGAGAAGACGAATTAGAA+CGG | - | chr4_3:67023145-67023164 | None:intergenic | 30.0% | |
| ! | AACTTTTTGTCTATCAGTGA+GGG | - | chr4_3:67019999-67020018 | None:intergenic | 30.0% |
| AATAGAAACAAACGAAGCAA+GGG | - | chr4_3:67023334-67023353 | None:intergenic | 30.0% | |
| AAATAGAAACAAACGAAGCA+AGG | - | chr4_3:67023335-67023354 | None:intergenic | 30.0% | |
| !! | TAGCAAACTTGCTATTTATC+AGG | + | chr4_3:67020210-67020229 | Msa0657380:CDS | 30.0% |
| !! | TGCTATTTATCAGGTTGATA+AGG | + | chr4_3:67020219-67020238 | Msa0657380:intron | 30.0% |
| !!! | GAATGTTGTTGTTTTTGGAA+TGG | + | chr4_3:67020435-67020454 | Msa0657380:CDS | 30.0% |
| TTTGAGAAGCCGAATTAGAA+CGG | - | chr4_3:67019852-67019871 | None:intergenic | 35.0% | |
| ! | CAACTTTTTGTCTATCAGTG+AGG | - | chr4_3:67020000-67020019 | None:intergenic | 35.0% |
| !!! | GAATTAGTTTTTCCAGCCTT+AGG | - | chr4_3:67020319-67020338 | None:intergenic | 35.0% |
| GGCTGGAAAAACTAATTCAT+CGG | + | chr4_3:67020321-67020340 | Msa0657380:CDS | 35.0% | |
| !!! | TGGGTGAATGTTGTTGTTTT+TGG | + | chr4_3:67020430-67020449 | Msa0657380:CDS | 35.0% |
| !!! | GTTTTTGGAATGAGTTTGGT+TGG | + | chr4_3:67020445-67020464 | Msa0657380:CDS | 35.0% |
| ! | GTTGGTGGAATTGTTCTATA+AGG | + | chr4_3:67020463-67020482 | Msa0657380:intron | 35.0% |
| AATTTATACATGAGGGGCTT+AGG | + | chr4_3:67020753-67020772 | Msa0657380:intron | 35.0% | |
| TAGGGTCAAAATGATTCTCA+AGG | + | chr4_3:67020827-67020846 | Msa0657380:intron | 35.0% | |
| ATTCGGTTATAGCAAAGGTA+TGG | + | chr4_3:67020921-67020940 | Msa0657380:intron | 35.0% | |
| ! | TTCGGTTATAGCAAAGGTAT+GGG | + | chr4_3:67020922-67020941 | Msa0657380:intron | 35.0% |
| ! | CTCTTTAAGAGTTGAGTGAT+AGG | + | chr4_3:67021019-67021038 | Msa0657380:intron | 35.0% |
| AGTTGAGTGATAGGTGAATT+AGG | + | chr4_3:67021028-67021047 | Msa0657380:intron | 35.0% | |
| AAATTTCAAATGCCTTGGTG+TGG | + | chr4_3:67021112-67021131 | Msa0657380:intron | 35.0% | |
| ! | AGATTTTTCCACCTTTGATC+CGG | + | chr4_3:67021163-67021182 | Msa0657380:intron | 35.0% |
| ! | TATTTTCCTTTCCGGATCAA+AGG | - | chr4_3:67021177-67021196 | None:intergenic | 35.0% |
| ! | CCTTCTCATATTTTCCTTTC+CGG | - | chr4_3:67021185-67021204 | None:intergenic | 35.0% |
| ! | AGAAGGTGATGATGTTAGTT+TGG | + | chr4_3:67021199-67021218 | Msa0657380:intron | 35.0% |
| TGACTATTTGGGAAATTGGA+AGG | + | chr4_3:67021227-67021246 | Msa0657380:intron | 35.0% | |
| ACGAATGATAGAATCTGCAA+CGG | + | chr4_3:67021252-67021271 | Msa0657380:intron | 35.0% | |
| GAGTCATGTCATTACTATGA+AGG | + | chr4_3:67021360-67021379 | Msa0657380:intron | 35.0% | |
| ATTTCCATGGGAATAAGTAC+AGG | - | chr4_3:67021459-67021478 | None:intergenic | 35.0% | |
| CAAGTGGTACTAAATTTCCA+TGG | - | chr4_3:67021472-67021491 | None:intergenic | 35.0% | |
| AAAGAGGAACTAAGTACAAG+TGG | - | chr4_3:67021488-67021507 | None:intergenic | 35.0% | |
| TTTGGATGAAATTCTCAGGA+TGG | + | chr4_3:67021656-67021675 | Msa0657380:intron | 35.0% | |
| GAGTAAACAAGAATCACATC+TGG | - | chr4_3:67022237-67022256 | None:intergenic | 35.0% | |
| ! | CGTACTTTTAGCCGTAAAAA+AGG | + | chr4_3:67022462-67022481 | Msa0657380:intron | 35.0% |
| ! | ACTTTTAGCCGTAAAAAAGG+TGG | + | chr4_3:67022465-67022484 | Msa0657380:intron | 35.0% |
| ! | CTTTTAGCCGTAAAAAAGGT+GGG | + | chr4_3:67022466-67022485 | Msa0657380:intron | 35.0% |
| !!! | GTTAGAACCCACCTTTTTTA+CGG | - | chr4_3:67022476-67022495 | None:intergenic | 35.0% |
| TTGTAACTGATAAGTGGTGA+GGG | - | chr4_3:67022583-67022602 | None:intergenic | 35.0% | |
| ATTGTAACTGATAAGTGGTG+AGG | - | chr4_3:67022584-67022603 | None:intergenic | 35.0% | |
| CAAATCTTCTTTGTCTGTCA+TGG | - | chr4_3:67022626-67022645 | None:intergenic | 35.0% | |
| GGAGGATGGAAATTAATGAT+TGG | - | chr4_3:67022698-67022717 | None:intergenic | 35.0% | |
| ! | GGGGTTGCATTTTATATCTT+AGG | - | chr4_3:67022719-67022738 | None:intergenic | 35.0% |
| TACTAGTGCTTATTCTTGCT+TGG | - | chr4_3:67022768-67022787 | None:intergenic | 35.0% | |
| AACCGTTGTTTAGAAATGGT+GGG | - | chr4_3:67022795-67022814 | None:intergenic | 35.0% | |
| TGAGGGTGATGATATTATTG+GGG | - | chr4_3:67022935-67022954 | None:intergenic | 35.0% | |
| GTGAGGGTGATGATATTATT+GGG | - | chr4_3:67022936-67022955 | None:intergenic | 35.0% | |
| ! | AATTAGAACGGAGAACCTTT+TGG | - | chr4_3:67023133-67023152 | None:intergenic | 35.0% |
| AGAATCTTCTGGTGCAAAAA+TGG | - | chr4_3:67023235-67023254 | None:intergenic | 35.0% | |
| ! | CAACTTTTTGTCTATCAGTG+AGG | - | chr4_3:67020000-67020019 | None:intergenic | 35.0% |
| AATCAAGTTAGTATGGCTAC+CGG | + | chr4_3:67023441-67023460 | Msa0657380:CDS | 35.0% | |
| GGTATAAACAGTACCAGTAA+CGG | - | chr4_3:67023481-67023500 | None:intergenic | 35.0% | |
| !! | GAATTTGTTTTTCCAGCCTT+AGG | - | chr4_3:67023612-67023631 | None:intergenic | 35.0% |
| GGCTGGAAAAACAAATTCTT+CGG | + | chr4_3:67023614-67023633 | Msa0657380:CDS | 35.0% | |
| AATTCTTCGGTTGTAGATGA+TGG | + | chr4_3:67023627-67023646 | Msa0657380:CDS | 35.0% | |
| !!! | TGGCTGAATGTTGTTGTTTT+TGG | + | chr4_3:67023723-67023742 | Msa0657380:CDS | 35.0% |
| !!! | TGTTGTTTTTGGAATGGGTT+TGG | + | chr4_3:67023734-67023753 | Msa0657380:CDS | 35.0% |
| TGCTAGAAGAAGAAATGAGG+TGG | - | chr4_3:67019570-67019589 | None:intergenic | 40.0% | |
| TGATGGAGATGATGTTGTAG+GGG | - | chr4_3:67019642-67019661 | None:intergenic | 40.0% | |
| ! | GTGATGGAGATGATGTTGTA+GGG | - | chr4_3:67019643-67019662 | None:intergenic | 40.0% |
| !! | GATGCTGTTGTTGATGGTAA+GGG | - | chr4_3:67019668-67019687 | None:intergenic | 40.0% |
| !! | TGATGCTGTTGTTGATGGTA+AGG | - | chr4_3:67019669-67019688 | None:intergenic | 40.0% |
| TTGGAGAATGCAGAATCTTC+TGG | - | chr4_3:67019953-67019972 | None:intergenic | 40.0% | |
| CATTCTCCAAACTCAAAGCA+GGG | + | chr4_3:67019963-67019982 | Msa0657380:CDS | 40.0% | |
| AATCGAAACGAATGAAGCGA+GGG | - | chr4_3:67020041-67020060 | None:intergenic | 40.0% | |
| AAATCGAAACGAATGAAGCG+AGG | - | chr4_3:67020042-67020061 | None:intergenic | 40.0% | |
| !! | TGTTTGAACAGGGTTGGTTA+AGG | - | chr4_3:67020077-67020096 | None:intergenic | 40.0% |
| CAACTGAACGTCACTACTTA+CGG | + | chr4_3:67020121-67020140 | Msa0657380:CDS | 40.0% | |
| AGTCAAGTTAGTATGGCTAC+CGG | + | chr4_3:67020148-67020167 | Msa0657380:CDS | 40.0% | |
| !! | GGTATAAACAGTACCGGTAA+CGG | - | chr4_3:67020188-67020207 | None:intergenic | 40.0% |
| GCTATCGGTATAAACAGTAC+CGG | - | chr4_3:67020194-67020213 | None:intergenic | 40.0% | |
| ! | AATTCATCGGTTGTAGACGA+TGG | + | chr4_3:67020334-67020353 | Msa0657380:CDS | 40.0% |
| ! | TTTGGAATGAGTTTGGTTGG+TGG | + | chr4_3:67020448-67020467 | Msa0657380:CDS | 40.0% |
| GGTGGAATTGTTCTATAAGG+TGG | + | chr4_3:67020466-67020485 | Msa0657380:intron | 40.0% | |
| ATAAAAGGAGATCACGGAGA+AGG | - | chr4_3:67020855-67020874 | None:intergenic | 40.0% | |
| GTCTTCCGAGTCACAAAATT+CGG | + | chr4_3:67020904-67020923 | Msa0657380:intron | 40.0% | |
| ! | TCGGTTATAGCAAAGGTATG+GGG | + | chr4_3:67020923-67020942 | Msa0657380:intron | 40.0% |
| GTGATAGGTGAATTAGGACA+TGG | + | chr4_3:67021034-67021053 | Msa0657380:intron | 40.0% | |
| GTAACACTATTACCACACCA+AGG | - | chr4_3:67021127-67021146 | None:intergenic | 40.0% | |
| TGGTGTGGTAATAGTGTTAC+CGG | + | chr4_3:67021127-67021146 | Msa0657380:intron | 40.0% | |
| AAATCTCTAGCAATGTTCCC+CGG | - | chr4_3:67021149-67021168 | None:intergenic | 40.0% | |
| CCGGAAAGGAAAATATGAGA+AGG | + | chr4_3:67021182-67021201 | Msa0657380:intron | 40.0% | |
| ! | AAAATCTACAAAGATGGCGG+AGG | + | chr4_3:67021281-67021300 | Msa0657380:intron | 40.0% |
| ACTACCTGTACTTATTCCCA+TGG | + | chr4_3:67021452-67021471 | Msa0657380:intron | 40.0% | |
| TGAGTGACGTTAAGAGAAGT+AGG | + | chr4_3:67021601-67021620 | Msa0657380:intron | 40.0% | |
| AGAGAAGTAGGATTGAGATG+TGG | + | chr4_3:67021613-67021632 | Msa0657380:intron | 40.0% | |
| AAGTAGGATTGAGATGTGGA+GGG | + | chr4_3:67021617-67021636 | Msa0657380:intron | 40.0% | |
| ! | ACGGTTTGGATGAAATTCTC+AGG | + | chr4_3:67021652-67021671 | Msa0657380:intron | 40.0% |
| CATTGAACTTAACTATGGGG+CGG | + | chr4_3:67021751-67021770 | Msa0657380:intron | 40.0% | |
| AGGTCTGTATTTCCTTCACA+TGG | - | chr4_3:67021812-67021831 | None:intergenic | 40.0% | |
| GGAAATACAGACCTGAAACA+AGG | + | chr4_3:67021818-67021837 | Msa0657380:intron | 40.0% | |
| ! | CATTGTGAGTTCCTTGTTTC+AGG | - | chr4_3:67021832-67021851 | None:intergenic | 40.0% |
| AAACTGAGACTCGAATGAGA+AGG | - | chr4_3:67021910-67021929 | None:intergenic | 40.0% | |
| TGCTAGCTCATCAAGATACA+AGG | - | chr4_3:67022440-67022459 | None:intergenic | 40.0% | |
| GTTCTAACACTTCATGCAGA+TGG | + | chr4_3:67022488-67022507 | Msa0657380:intron | 40.0% | |
| AGGTAGTGTTAGAGCCTATA+AGG | - | chr4_3:67022540-67022559 | None:intergenic | 40.0% | |
| CTTCTTTGTCTGTCATGGAA+AGG | - | chr4_3:67022621-67022640 | None:intergenic | 40.0% | |
| !! | ATTCTTGCTTGGTGATGTTG+TGG | - | chr4_3:67022757-67022776 | None:intergenic | 40.0% |
| CTCCCACCATTTCTAAACAA+CGG | + | chr4_3:67022790-67022809 | Msa0657380:intron | 40.0% | |
| GAACCGTTGTTTAGAAATGG+TGG | - | chr4_3:67022796-67022815 | None:intergenic | 40.0% | |
| TGCTAGAAGAAAGAATGAGG+TGG | - | chr4_3:67022863-67022882 | None:intergenic | 40.0% | |
| GGTTTGAATTGGTGAGAGTT+GGG | - | chr4_3:67022914-67022933 | None:intergenic | 40.0% | |
| GGTGAGGGTGATGATATTAT+TGG | - | chr4_3:67022937-67022956 | None:intergenic | 40.0% | |
| !! | GATGCTGTTGTTGATGGTAA+GGG | - | chr4_3:67019668-67019687 | None:intergenic | 40.0% |
| !! | TGATGCTGTTGTTGATGGTA+AGG | - | chr4_3:67019669-67019688 | None:intergenic | 40.0% |
| TTGGAGAATGCAGAATCTTC+TGG | - | chr4_3:67019953-67019972 | None:intergenic | 40.0% | |
| CATTCTCCAAACTCAAAGCA+GGG | + | chr4_3:67019963-67019982 | Msa0657380:CDS | 40.0% | |
| !! | TGTTTGAACAGGGTTGGTTA+AGG | - | chr4_3:67020077-67020096 | None:intergenic | 40.0% |
| CAGTGGCAATCAAGTTAGTA+TGG | + | chr4_3:67023434-67023453 | Msa0657380:CDS | 40.0% | |
| !!! | GTTTTTGGAATGGGTTTGGT+TGG | + | chr4_3:67023738-67023757 | Msa0657380:CDS | 40.0% |
| GATGGAGATGATGTTGTAGG+GGG | - | chr4_3:67019641-67019660 | None:intergenic | 45.0% | |
| !! | GGTGATGGAGATGATGTTGT+AGG | - | chr4_3:67019644-67019663 | None:intergenic | 45.0% |
| ! | GTTGCTGTTGTTGCTGGTAA+TGG | - | chr4_3:67019695-67019714 | None:intergenic | 45.0% |
| ACTGTGCTTAATCCTGGTGA+TGG | - | chr4_3:67019722-67019741 | None:intergenic | 45.0% | |
| AGTGGAACTGTGCTTAATCC+TGG | - | chr4_3:67019728-67019747 | None:intergenic | 45.0% | |
| !! | GTTGGTGTTGTTGGAACAAG+TGG | - | chr4_3:67019746-67019765 | None:intergenic | 45.0% |
| CTTGTTCCAACAACACCAAC+TGG | + | chr4_3:67019746-67019765 | Msa0657380:CDS | 45.0% | |
| !!! | CCTTTTGGGACTGTTATGGT+GGG | - | chr4_3:67019782-67019801 | None:intergenic | 45.0% |
| !!! | TCCTTTTGGGACTGTTATGG+TGG | - | chr4_3:67019783-67019802 | None:intergenic | 45.0% |
| !!! | TGTCAATGGTGGGTCCTTTT+GGG | - | chr4_3:67019796-67019815 | None:intergenic | 45.0% |
| !!! | ATGTCAATGGTGGGTCCTTT+TGG | - | chr4_3:67019797-67019816 | None:intergenic | 45.0% |
| ! | ATACTAGCTGCGAGTTGAGT+TGG | - | chr4_3:67019892-67019911 | None:intergenic | 45.0% |
| GTATCATCGCCATCAAGTTC+AGG | + | chr4_3:67019908-67019927 | Msa0657380:CDS | 45.0% | |
| GTTAACCCTCCTGAACTTGA+TGG | - | chr4_3:67019920-67019939 | None:intergenic | 45.0% | |
| GCATTCTCCAAACTCAAAGC+AGG | + | chr4_3:67019962-67019981 | Msa0657380:CDS | 45.0% | |
| AACCCTGTTCAAACACAAGC+CGG | + | chr4_3:67020082-67020101 | Msa0657380:CDS | 45.0% | |
| TTGAAGCCTAGCATCATCAC+CGG | - | chr4_3:67020104-67020123 | None:intergenic | 45.0% | |
| AACGGTAGCATTAACTGCTC+CGG | - | chr4_3:67020170-67020189 | None:intergenic | 45.0% | |
| GCAGTTAATGCTACCGTTAC+CGG | + | chr4_3:67020172-67020191 | Msa0657380:CDS | 45.0% | |
| GCCTCTTGATCTTGTTCTTC+CGG | + | chr4_3:67020249-67020268 | Msa0657380:CDS | 45.0% | |
| TGATCTTGTTCTTCCGGCTA+AGG | + | chr4_3:67020255-67020274 | Msa0657380:CDS | 45.0% | |
| TTAGGCAACAAACCCTTAGC+TGG | - | chr4_3:67020301-67020320 | None:intergenic | 45.0% | |
| !! | AGCTAAGGGTTTGTTGCCTA+AGG | + | chr4_3:67020300-67020319 | Msa0657380:CDS | 45.0% |
| !! | TAGTGATGATGGTGATGGCA+AGG | + | chr4_3:67020369-67020388 | Msa0657380:CDS | 45.0% |
| ! | TTTGTGACTCGGAAGACAGA+GGG | - | chr4_3:67020901-67020920 | None:intergenic | 45.0% |
| !! | TTTTGTGACTCGGAAGACAG+AGG | - | chr4_3:67020902-67020921 | None:intergenic | 45.0% |
| GAATTAGGACATGGAAACCG+AGG | + | chr4_3:67021043-67021062 | Msa0657380:intron | 45.0% | |
| AGTGGTAAACAAGCGATCCT+CGG | - | chr4_3:67021063-67021082 | None:intergenic | 45.0% | |
| GGTGTGGTAATAGTGTTACC+GGG | + | chr4_3:67021128-67021147 | Msa0657380:intron | 45.0% | |
| GTGTGGTAATAGTGTTACCG+GGG | + | chr4_3:67021129-67021148 | Msa0657380:intron | 45.0% | |
| TTTCCACCTTTGATCCGGAA+AGG | + | chr4_3:67021168-67021187 | Msa0657380:intron | 45.0% | |
| TTTCCTTTCCGGATCAAAGG+TGG | - | chr4_3:67021174-67021193 | None:intergenic | 45.0% | |
| !! | GAGGTGGTTGACTCGATAAA+AGG | + | chr4_3:67021300-67021319 | Msa0657380:intron | 45.0% |
| GAAGTAGGATTGAGATGTGG+AGG | + | chr4_3:67021616-67021635 | Msa0657380:intron | 45.0% | |
| CTCAGGATGGAATCTGACAT+TGG | + | chr4_3:67021669-67021688 | Msa0657380:intron | 45.0% | |
| AATCTGACATTGGAGCCTCA+CGG | + | chr4_3:67021679-67021698 | Msa0657380:intron | 45.0% | |
| TCACGAATCTTGCAAGTCAG+AGG | - | chr4_3:67021783-67021802 | None:intergenic | 45.0% | |
| ATGAGAAGGACCAAATGACG+TGG | - | chr4_3:67021896-67021915 | None:intergenic | 45.0% | |
| TAACTGATAAGTGGTGAGGG+AGG | - | chr4_3:67022580-67022599 | None:intergenic | 45.0% | |
| CTTTGTCTGTCATGGAAAGG+TGG | - | chr4_3:67022618-67022637 | None:intergenic | 45.0% | |
| GTGATGTTGTGGATGAAGAG+GGG | - | chr4_3:67022746-67022765 | None:intergenic | 45.0% | |
| GGTGATGTTGTGGATGAAGA+GGG | - | chr4_3:67022747-67022766 | None:intergenic | 45.0% | |
| ! | TGGTGATGTTGTGGATGAAG+AGG | - | chr4_3:67022748-67022767 | None:intergenic | 45.0% |
| AGAGTTGGGCTAATGTGGTT+GGG | - | chr4_3:67022900-67022919 | None:intergenic | 45.0% | |
| GGGTTTGAATTGGTGAGAGT+TGG | - | chr4_3:67022915-67022934 | None:intergenic | 45.0% | |
| ! | GTTGCTGTTGTTGCTGGTAA+TGG | - | chr4_3:67019695-67019714 | None:intergenic | 45.0% |
| ACTGTGCTTAATCCTGGTGA+TGG | - | chr4_3:67019722-67019741 | None:intergenic | 45.0% | |
| !! | GTTGGTGTTGTTGGAACAAG+CGG | - | chr4_3:67019746-67019765 | None:intergenic | 45.0% |
| CTTGTTCCAACAACACCAAC+TGG | + | chr4_3:67019746-67019765 | Msa0657380:CDS | 45.0% | |
| !!! | TTTTGGGATTGCTTTGGTGG+GGG | - | chr4_3:67023073-67023092 | None:intergenic | 45.0% |
| !!! | CTTTTGGGATTGCTTTGGTG+GGG | - | chr4_3:67023074-67023093 | None:intergenic | 45.0% |
| !!! | CCTTTTGGGATTGCTTTGGT+GGG | - | chr4_3:67023075-67023094 | None:intergenic | 45.0% |
| !!! | TCCTTTTGGGATTGCTTTGG+TGG | - | chr4_3:67023076-67023095 | None:intergenic | 45.0% |
| !!! | TGTCAATGGTGGGTCCTTTT+GGG | - | chr4_3:67019796-67019815 | None:intergenic | 45.0% |
| !!! | ATGTCAATGGTGGGTCCTTT+TGG | - | chr4_3:67019797-67019816 | None:intergenic | 45.0% |
| ! | ATACTAGCTGCGAGTTGAGT+TGG | - | chr4_3:67019892-67019911 | None:intergenic | 45.0% |
| CAGCTAGTATCATCACCATC+AGG | + | chr4_3:67023195-67023214 | Msa0657380:CDS | 45.0% | |
| GTATCATCACCATCAGGTTC+AGG | + | chr4_3:67023201-67023220 | Msa0657380:CDS | 45.0% | |
| GCATTCTCCAAACTCAAAGC+AGG | + | chr4_3:67019962-67019981 | Msa0657380:CDS | 45.0% | |
| AACCCTGTTCAAACACAAGC+CGG | + | chr4_3:67020082-67020101 | Msa0657380:CDS | 45.0% | |
| TTGAAGCCTAGCATCATCAC+CGG | - | chr4_3:67020104-67020123 | None:intergenic | 45.0% | |
| CTGAACGTCACTACTTACAG+TGG | + | chr4_3:67023417-67023436 | Msa0657380:CDS | 45.0% | |
| AACGGTAGCATTAACTGCTC+CGG | - | chr4_3:67020170-67020189 | None:intergenic | 45.0% | |
| GCAGTTAATGCTACCGTTAC+TGG | + | chr4_3:67020172-67020191 | Msa0657380:CDS | 45.0% | |
| GCCTCTTGATCTTGTTCTTC+CGG | + | chr4_3:67020249-67020268 | Msa0657380:CDS | 45.0% | |
| TGATCTTGTTCTTCCGGCTA+AGG | + | chr4_3:67020255-67020274 | Msa0657380:CDS | 45.0% | |
| TTAGGCAACAAACCCTTAGC+CGG | - | chr4_3:67020301-67020320 | None:intergenic | 45.0% | |
| ! | TCGGTTGTAGATGATGGTAG+CGG | + | chr4_3:67023633-67023652 | Msa0657380:CDS | 45.0% |
| !! | CAGTGATGATGGTGATGGAA+AGG | + | chr4_3:67023662-67023681 | Msa0657380:CDS | 45.0% |
| ! | TTTGGAATGGGTTTGGTTGG+TGG | + | chr4_3:67023741-67023760 | Msa0657380:CDS | 45.0% |
| TGAGAGTTGGGCTAAAGTGG+TGG | - | chr4_3:67019609-67019628 | None:intergenic | 50.0% | |
| TGGTGAGAGTTGGGCTAAAG+TGG | - | chr4_3:67019612-67019631 | None:intergenic | 50.0% | |
| GGGTGGAATTGGTGAGAGTT+GGG | - | chr4_3:67019621-67019640 | None:intergenic | 50.0% | |
| GATGTTGTAGGGGGTGGAAT+TGG | - | chr4_3:67019632-67019651 | None:intergenic | 50.0% | |
| !! | GTTGATGGTAAGGGTGGTGA+TGG | - | chr4_3:67019659-67019678 | None:intergenic | 50.0% |
| !! | GCTGTTGTTGATGGTAAGGG+TGG | - | chr4_3:67019665-67019684 | None:intergenic | 50.0% |
| ! | GGTGGTGATGCTGTTGTTGA+TGG | - | chr4_3:67019674-67019693 | None:intergenic | 50.0% |
| !! | GCTGTTGTTGCTGGTAATGG+TGG | - | chr4_3:67019692-67019711 | None:intergenic | 50.0% |
| CCCACCATAACAGTCCCAAA+AGG | + | chr4_3:67019779-67019798 | Msa0657380:intron | 50.0% | |
| !!! | GGGTCCTTTTGGGACTGTTA+TGG | - | chr4_3:67019786-67019805 | None:intergenic | 50.0% |
| TCATCGCCATCAAGTTCAGG+AGG | + | chr4_3:67019911-67019930 | Msa0657380:CDS | 50.0% | |
| CATCGCCATCAAGTTCAGGA+GGG | + | chr4_3:67019912-67019931 | Msa0657380:CDS | 50.0% | |
| ! | GAGGAACCCTGCTTTGAGTT+TGG | - | chr4_3:67019972-67019991 | None:intergenic | 50.0% |
| GTCTATCAGTGAGGGAGTTG+AGG | - | chr4_3:67019991-67020010 | None:intergenic | 50.0% | |
| GGCTTGTGTTTGAACAGGGT+TGG | - | chr4_3:67020083-67020102 | None:intergenic | 50.0% | |
| !! | CACCGGCTTGTGTTTGAACA+GGG | - | chr4_3:67020087-67020106 | None:intergenic | 50.0% |
| !! | TCACCGGCTTGTGTTTGAAC+AGG | - | chr4_3:67020088-67020107 | None:intergenic | 50.0% |
| CTGAACGTCACTACTTACGG+TGG | + | chr4_3:67020124-67020143 | Msa0657380:CDS | 50.0% | |
| CGGTGGCAGTCAAGTTAGTA+TGG | + | chr4_3:67020141-67020160 | Msa0657380:CDS | 50.0% | |
| GCCGGAAGAACAAGATCAAG+AGG | - | chr4_3:67020253-67020272 | None:intergenic | 50.0% | |
| !! | AAGGGTTTGTTGCCTAAGGC+TGG | + | chr4_3:67020304-67020323 | Msa0657380:CDS | 50.0% |
| !! | AGTGGTGCTGGTAGTGATGA+TGG | + | chr4_3:67020358-67020377 | Msa0657380:CDS | 50.0% |
| !! | GCTGGTAGTGATGATGGTGA+TGG | + | chr4_3:67020364-67020383 | Msa0657380:CDS | 50.0% |
| ! | CTGCTGATGTTTCTGCTGCA+GGG | + | chr4_3:67020398-67020417 | Msa0657380:CDS | 50.0% |
| !! | ATCTACAAAGATGGCGGAGG+TGG | + | chr4_3:67021284-67021303 | Msa0657380:intron | 50.0% |
| GGATTGAGATGTGGAGGGAA+CGG | + | chr4_3:67021622-67021641 | Msa0657380:intron | 50.0% | |
| TGGAGGGAACGGAACTGTAA+CGG | + | chr4_3:67021633-67021652 | Msa0657380:intron | 50.0% | |
| GGAACGGAACTGTAACGGTT+TGG | + | chr4_3:67021638-67021657 | Msa0657380:intron | 50.0% | |
| ATTGGAGCCTCACGGAAATG+TGG | + | chr4_3:67021687-67021706 | Msa0657380:intron | 50.0% | |
| GTCTTGTCCACATTTCCGTG+AGG | - | chr4_3:67021697-67021716 | None:intergenic | 50.0% | |
| TCGTGAGCACTACCATGTGA+AGG | + | chr4_3:67021797-67021816 | Msa0657380:intron | 50.0% | |
| GGTCCATGTACCACGTCATT+TGG | + | chr4_3:67021883-67021902 | Msa0657380:intron | 50.0% | |
| GGACCAAATGACGTGGTACA+TGG | - | chr4_3:67021889-67021908 | None:intergenic | 50.0% | |
| TGTGGATGAAGAGGGGAGAA+GGG | - | chr4_3:67022739-67022758 | None:intergenic | 50.0% | |
| TTGTGGATGAAGAGGGGAGA+AGG | - | chr4_3:67022740-67022759 | None:intergenic | 50.0% | |
| GAGTTGGGCTAATGTGGTTG+GGG | - | chr4_3:67022899-67022918 | None:intergenic | 50.0% | |
| GAGAGTTGGGCTAATGTGGT+TGG | - | chr4_3:67022901-67022920 | None:intergenic | 50.0% | |
| TGGTGAGAGTTGGGCTAATG+TGG | - | chr4_3:67022905-67022924 | None:intergenic | 50.0% | |
| !! | GTTGATGGTAAGGGTGGTGA+GGG | - | chr4_3:67019659-67019678 | None:intergenic | 50.0% |
| !! | TGTTGATGGTAAGGGTGGTG+AGG | - | chr4_3:67019660-67019679 | None:intergenic | 50.0% |
| !! | GCTGTTGTTGATGGTAAGGG+TGG | - | chr4_3:67019665-67019684 | None:intergenic | 50.0% |
| ! | GGTGGTGATGCTGTTGTTGA+TGG | - | chr4_3:67019674-67019693 | None:intergenic | 50.0% |
| !! | GCTGTTGTTGCTGGTAATGG+TGG | - | chr4_3:67019692-67019711 | None:intergenic | 50.0% |
| AGCGGAACTGTGCTTAATCC+TGG | - | chr4_3:67023021-67023040 | None:intergenic | 50.0% | |
| CCCACCAAAGCAATCCCAAA+AGG | + | chr4_3:67023072-67023091 | Msa0657380:CDS | 50.0% | |
| !!! | GGGTCCTTTTGGGATTGCTT+TGG | - | chr4_3:67023079-67023098 | None:intergenic | 50.0% |
| TCATCACCATCAGGTTCAGG+AGG | + | chr4_3:67023204-67023223 | Msa0657380:CDS | 50.0% | |
| CATCACCATCAGGTTCAGGA+GGG | + | chr4_3:67023205-67023224 | Msa0657380:CDS | 50.0% | |
| GTTAACCCTCCTGAACCTGA+TGG | - | chr4_3:67023213-67023232 | None:intergenic | 50.0% | |
| ! | GAGGAACCCTGCTTTGAGTT+TGG | - | chr4_3:67019972-67019991 | None:intergenic | 50.0% |
| GTCTATCAGTGAGGGAGTTG+AGG | - | chr4_3:67019991-67020010 | None:intergenic | 50.0% | |
| GGCTTGTGTTTGAACAGGGT+TGG | - | chr4_3:67020083-67020102 | None:intergenic | 50.0% | |
| !! | CACCGGCTTGTGTTTGAACA+GGG | - | chr4_3:67020087-67020106 | None:intergenic | 50.0% |
| !! | TCACCGGCTTGTGTTTGAAC+AGG | - | chr4_3:67020088-67020107 | None:intergenic | 50.0% |
| GCCGGAAGAACAAGATCAAG+AGG | - | chr4_3:67020253-67020272 | None:intergenic | 50.0% | |
| !! | GGCTAAGGGTTTGTTGCCTA+AGG | + | chr4_3:67023593-67023612 | Msa0657380:CDS | 50.0% |
| !! | AAGGGTTTGTTGCCTAAGGC+TGG | + | chr4_3:67020304-67020323 | Msa0657380:CDS | 50.0% |
| GAGTTGGGCTAAAGTGGTGG+AGG | - | chr4_3:67019606-67019625 | None:intergenic | 55.0% | |
| GGGGTGGAATTGGTGAGAGT+TGG | - | chr4_3:67019622-67019641 | None:intergenic | 55.0% | |
| GGAGATGATGTTGTAGGGGG+TGG | - | chr4_3:67019638-67019657 | None:intergenic | 55.0% | |
| !! | GGTGCTGTTGCTGTTGTTGC+TGG | - | chr4_3:67019701-67019720 | None:intergenic | 55.0% |
| ACAGCAACAGCACCATCACC+AGG | + | chr4_3:67019707-67019726 | Msa0657380:CDS | 55.0% | |
| !! | GGTGCACCAGTTGGTGTTGT+TGG | - | chr4_3:67019755-67019774 | None:intergenic | 55.0% |
| !! | GGGACTGTTATGGTGGGTGA+TGG | - | chr4_3:67019776-67019795 | None:intergenic | 55.0% |
| ! | CACAAGCCGGTGATGATGCT+AGG | + | chr4_3:67020095-67020114 | Msa0657380:CDS | 55.0% |
| ! | TAAGGCTCCATCTCTGGCTC+CGG | + | chr4_3:67020273-67020292 | Msa0657380:CDS | 55.0% |
| AACAAACCCTTAGCTGGCGC+CGG | - | chr4_3:67020295-67020314 | None:intergenic | 55.0% | |
| TCGGTTGTAGACGATGGCAG+TGG | + | chr4_3:67020340-67020359 | Msa0657380:CDS | 55.0% | |
| CCTGCAGCAGAAACATCAGC+AGG | - | chr4_3:67020400-67020419 | None:intergenic | 55.0% | |
| ! | CCTGCTGATGTTTCTGCTGC+AGG | + | chr4_3:67020397-67020416 | Msa0657380:CDS | 55.0% |
| TGCTGCAGGGTCTGTGATGT+GGG | + | chr4_3:67020411-67020430 | Msa0657380:CDS | 55.0% | |
| GTGGATGAAGAGGGGAGAAG+GGG | - | chr4_3:67022738-67022757 | None:intergenic | 55.0% | |
| !! | GGTGCTGTTGCTGTTGTTGC+TGG | - | chr4_3:67019701-67019720 | None:intergenic | 55.0% |
| ACAGCAACAGCACCATCACC+AGG | + | chr4_3:67019707-67019726 | Msa0657380:CDS | 55.0% | |
| !! | GGTGCACCAGTTGGTGTTGT+TGG | - | chr4_3:67019755-67019774 | None:intergenic | 55.0% |
| ! | CACAAGCCGGTGATGATGCT+AGG | + | chr4_3:67020095-67020114 | Msa0657380:CDS | 55.0% |
| AACAAACCCTTAGCCGGTGC+AGG | - | chr4_3:67023588-67023607 | None:intergenic | 55.0% | |
| !! | GTAGATGATGGTAGCGGTGC+TGG | + | chr4_3:67023639-67023658 | Msa0657380:CDS | 55.0% |
| !! | GCTGGCAGTGATGATGGTGA+TGG | + | chr4_3:67023657-67023676 | Msa0657380:CDS | 55.0% |
| CCTGCAGCAGAAACATCAGC+AGG | - | chr4_3:67020400-67020419 | None:intergenic | 55.0% | |
| ! | CCTGCTGATGTTTCTGCTGC+AGG | + | chr4_3:67020397-67020416 | Msa0657380:CDS | 55.0% |
| CTGCTGCAGGATCTGTGCAT+TGG | + | chr4_3:67023703-67023722 | Msa0657380:CDS | 55.0% | |
| ! | GTGGGTGATGGTGCACCAGT+TGG | - | chr4_3:67019764-67019783 | None:intergenic | 60.0% |
| TCCGGCTAAGGCTCCATCTC+TGG | + | chr4_3:67020267-67020286 | Msa0657380:CDS | 60.0% | |
| GCCAGAGATGGAGCCTTAGC+CGG | - | chr4_3:67020271-67020290 | None:intergenic | 60.0% | |
| GTAGACGATGGCAGTGGTGC+TGG | + | chr4_3:67020346-67020365 | Msa0657380:CDS | 60.0% | |
| CTGCTGCAGGGTCTGTGATG+TGG | + | chr4_3:67020410-67020429 | Msa0657380:CDS | 60.0% | |
| GGGATTGCTTTGGTGGGGGA+TGG | - | chr4_3:67023069-67023088 | None:intergenic | 60.0% | |
| TCCGGCTAAGGCTCCAGCTT+TGG | + | chr4_3:67023560-67023579 | Msa0657380:CDS | 60.0% | |
| GCCAAAGCTGGAGCCTTAGC+CGG | - | chr4_3:67023564-67023583 | None:intergenic | 60.0% | |
| ! | TCCAGCTTTGGCTCCTGCAC+CGG | + | chr4_3:67023572-67023591 | Msa0657380:CDS | 60.0% |
| !! | TTTGGCTCCTGCACCGGCTA+AGG | + | chr4_3:67023578-67023597 | Msa0657380:CDS | 60.0% |
| !! | TTGGCTCCTGCACCGGCTAA+GGG | + | chr4_3:67023579-67023598 | Msa0657380:CDS | 60.0% |
| !! | AGCGGTGCTGGCAGTGATGA+TGG | + | chr4_3:67023651-67023670 | Msa0657380:CDS | 60.0% |
| GTGGGGGATGGTGCACCAGT+TGG | - | chr4_3:67023057-67023076 | None:intergenic | 65.0% | |
| ! | TCTGGCTCCGGCGCCAGCTA+AGG | + | chr4_3:67020285-67020304 | Msa0657380:CDS | 70.0% |
| CTGGCTCCGGCGCCAGCTAA+GGG | + | chr4_3:67020286-67020305 | Msa0657380:CDS | 70.0% | |
| GCCGGTGCAGGAGCCAAAGC+TGG | - | chr4_3:67023576-67023595 | None:intergenic | 70.0% | |
| ! | GCTGGCGCCGGAGCCAGAGA+TGG | - | chr4_3:67020283-67020302 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 67019536 | 67023776 | 67019536 | ID=Msa0657380;Name=Msa0657380 |
| chr4_3 | mRNA | 67019536 | 67023776 | 67019536 | ID=Msa0657380-mRNA-1;Parent=Msa0657380;Name=Msa0657380-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0|0|1|0|0|5|0|605 |
| chr4_3 | exon | 67019536 | 67019767 | 67019536 | ID=Msa0657380-mRNA-1:exon:19315;Parent=Msa0657380-mRNA-1 |
| chr4_3 | exon | 67019792 | 67020015 | 67019792 | ID=Msa0657380-mRNA-1:exon:19316;Parent=Msa0657380-mRNA-1 |
| chr4_3 | exon | 67020031 | 67020231 | 67020031 | ID=Msa0657380-mRNA-1:exon:19317;Parent=Msa0657380-mRNA-1 |
| chr4_3 | exon | 67020241 | 67020474 | 67020241 | ID=Msa0657380-mRNA-1:exon:19318;Parent=Msa0657380-mRNA-1 |
| chr4_3 | exon | 67022850 | 67023776 | 67022850 | ID=Msa0657380-mRNA-1:exon:19319;Parent=Msa0657380-mRNA-1 |
| chr4_3 | CDS | 67019536 | 67019767 | 67019536 | ID=Msa0657380-mRNA-1:cds;Parent=Msa0657380-mRNA-1 |
| chr4_3 | CDS | 67019792 | 67020015 | 67019792 | ID=Msa0657380-mRNA-1:cds;Parent=Msa0657380-mRNA-1 |
| chr4_3 | CDS | 67020031 | 67020231 | 67020031 | ID=Msa0657380-mRNA-1:cds;Parent=Msa0657380-mRNA-1 |
| chr4_3 | CDS | 67020241 | 67020474 | 67020241 | ID=Msa0657380-mRNA-1:cds;Parent=Msa0657380-mRNA-1 |
| chr4_3 | CDS | 67022850 | 67023776 | 67022850 | ID=Msa0657380-mRNA-1:cds;Parent=Msa0657380-mRNA-1 |
| Gene Sequence |
| Protein sequence |
