Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0303160 | XP_003597539.2 | 94.637 | 317 | 6 | 3 | 1 | 307 | 1 | 316 | 0.0 | 570 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0303160 | sp|Q9SRR0|PEX13_ARATH | 64.925 | 134 | 36 | 3 | 173 | 303 | 179 | 304 | 1.12e-53 | 180 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0303160 | A0A396JDG5 | 94.637 | 317 | 6 | 3 | 1 | 307 | 1 | 316 | 0.0 | 570 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0072170 | Msa0303160 | 0.829862 | 4.058204e-55 | -8.615850e-47 |
| Msa0120540 | Msa0303160 | 0.828918 | 6.882548e-55 | -8.615850e-47 |
| Msa0194720 | Msa0303160 | 0.803699 | 3.078180e-49 | -8.615850e-47 |
| Msa0223920 | Msa0303160 | 0.890420 | 1.001648e-73 | -8.615850e-47 |
| Msa0229360 | Msa0303160 | 0.808387 | 3.174890e-50 | -8.615850e-47 |
| Msa0265160 | Msa0303160 | 0.913776 | 4.153674e-84 | -8.615850e-47 |
| Msa0303160 | Msa0534410 | 0.801724 | 7.865645e-49 | -8.615850e-47 |
| Msa0303160 | Msa0582280 | 0.826816 | 2.204280e-54 | -8.615850e-47 |
| Msa0303160 | Msa0585620 | -0.827085 | 1.900339e-54 | -8.615850e-47 |
| Msa0303160 | Msa0585650 | -0.831157 | 1.956933e-55 | -8.615850e-47 |
| Msa0303160 | Msa0649410 | 0.810035 | 1.408103e-50 | -8.615850e-47 |
| Msa0303160 | Msa0720370 | 0.802124 | 6.509776e-49 | -8.615850e-47 |
| Msa0303160 | Msa0837480 | 0.803464 | 3.442563e-49 | -8.615850e-47 |
| Msa0303160 | Msa0882730 | 0.800158 | 1.643168e-48 | -8.615850e-47 |
| Msa0303160 | Msa1010460 | 0.815364 | 9.603557e-52 | -8.615850e-47 |
| Msa0303160 | Msa1036910 | 0.830975 | 2.169790e-55 | -8.615850e-47 |
| Msa0303160 | Msa1136790 | 0.812835 | 3.471796e-51 | -8.615850e-47 |
| Msa0303160 | Msa1164020 | 0.811573 | 6.544848e-51 | -8.615850e-47 |
| Msa0303160 | Msa1172130 | -0.870476 | 1.417728e-66 | -8.615850e-47 |
| Msa0303160 | Msa1298550 | -0.847311 | 1.253100e-59 | -8.615850e-47 |
| Msa0303160 | Msa1330890 | -0.844174 | 8.902940e-59 | -8.615850e-47 |
| Msa0303160 | Msa1398170 | 0.804546 | 2.050877e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0303160 | MtrunA17_Chr2g0329681 | 94.637 | 317 | 6 | 3 | 1 | 307 | 1 | 316 | 0.0 | 570 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0303160 | AT3G07560.1 | 64.925 | 134 | 36 | 3 | 173 | 303 | 179 | 304 | 1.13e-54 | 180 |
Find 173 sgRNAs with CRISPR-Local
Find 387 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCCATCCCCGCCAGGATTT+TGG | 0.077584 | 2_3:+60327639 | Msa0303160:CDS |
| CATTCATTCATTTAATTTAA+TGG | 0.085838 | 2_3:+60326245 | Msa0303160:exon |
| ACCTGGTGGGTTAACCTTAT+TGG | 0.133357 | 2_3:-60330310 | None:intergenic |
| CCTGGTGGGTTAACCTTATT+GGG | 0.187363 | 2_3:-60330309 | None:intergenic |
| ATCAAAAGAAATGCAATTTA+AGG | 0.192093 | 2_3:-60330809 | None:intergenic |
| GGCATGGGAGTTGGTCCTTA+TGG | 0.236544 | 2_3:+60327581 | Msa0303160:CDS |
| GGCGGCCTTTACGGGTCATC+TGG | 0.240841 | 2_3:+60327491 | Msa0303160:CDS |
| ATGAATTATAATTCTGGATA+TGG | 0.252239 | 2_3:+60327365 | Msa0303160:CDS |
| CCACCTGATGGCGGTCTAAA+AGG | 0.267472 | 2_3:-60327054 | None:intergenic |
| TTCTGCTCCCATGGCCTTGC+GGG | 0.273660 | 2_3:-60327186 | None:intergenic |
| CCTGCTCGTTCCCAAGGTTT+TGG | 0.274939 | 2_3:-60327012 | None:intergenic |
| GGATATGGAGGCGGCCTTTA+CGG | 0.276729 | 2_3:+60327482 | Msa0303160:CDS |
| TCTTTCCCTAGATTGGTTCT+TGG | 0.279018 | 2_3:+60330621 | Msa0303160:three_prime_UTR |
| TCAACAATGAATTATAATTC+TGG | 0.282153 | 2_3:+60327359 | Msa0303160:CDS |
| GGTCCAATGGGTGGAATGGG+TGG | 0.286819 | 2_3:+60327554 | Msa0303160:CDS |
| GATCGCTCCGGCATGTTGTA+TGG | 0.292681 | 2_3:+60330240 | Msa0303160:CDS |
| GTTCATGACCGCCATGCTTC+AGG | 0.313874 | 2_3:+60328315 | Msa0303160:CDS |
| CAAGGACAACACAATTCTTC+TGG | 0.315449 | 2_3:+60330375 | Msa0303160:CDS |
| AGGGGCGCCATATGGATTAT+TGG | 0.316399 | 2_3:-60327618 | None:intergenic |
| AGAAAGAAAGGGTTTGGAAT+TGG | 0.324331 | 2_3:+60326155 | Msa0303160:five_prime_UTR |
| GATATGGAGGCGGCCTTTAC+GGG | 0.328777 | 2_3:+60327483 | Msa0303160:CDS |
| TCCCATGGCCTTGCGGGAAC+AGG | 0.329132 | 2_3:-60327180 | None:intergenic |
| ATGTACAGCAGAGGAGGATA+TGG | 0.331454 | 2_3:+60327467 | Msa0303160:intron |
| TATAATTCTGGATATGGATC+TGG | 0.345557 | 2_3:+60327371 | Msa0303160:CDS |
| CGCTTGAATTCACCATATAA+AGG | 0.349613 | 2_3:-60330878 | None:intergenic |
| ATATCGCTTAATCGAATATA+TGG | 0.350124 | 2_3:+60326178 | Msa0303160:five_prime_UTR |
| AGGCTGCTCCAAGTGGTTCT+TGG | 0.350275 | 2_3:+60330424 | Msa0303160:CDS |
| GGCTGCTCCAAGTGGTTCTT+GGG | 0.360698 | 2_3:+60330425 | Msa0303160:CDS |
| GTAAAACCAAGAACCAATCT+AGG | 0.361384 | 2_3:-60330627 | None:intergenic |
| TCTTCTTATGGTGGCGGGCT+AGG | 0.363667 | 2_3:+60327404 | Msa0303160:CDS |
| AGTGACGTTGTTGAGGCTTC+AGG | 0.364377 | 2_3:+60327084 | Msa0303160:CDS |
| AATGGAATGCCTGGGTGTTC+TGG | 0.368578 | 2_3:-60328291 | None:intergenic |
| GGGATGTATGGATCTTCTTA+TGG | 0.371652 | 2_3:+60327392 | Msa0303160:CDS |
| AAAGAAAGAAAGAAAGGGTT+TGG | 0.376040 | 2_3:+60326149 | Msa0303160:five_prime_UTR |
| GATCAAAACTAAGCCCAATA+AGG | 0.376110 | 2_3:+60330296 | Msa0303160:CDS |
| GGGGCGCCATATGGATTATT+GGG | 0.383445 | 2_3:-60327617 | None:intergenic |
| AGAAAGAAAGAAAGAAAGAA+AGG | 0.383887 | 2_3:+60326143 | Msa0303160:five_prime_UTR |
| AAGAAGAAGAAGAAAATAGA+AGG | 0.384670 | 2_3:-60326069 | None:intergenic |
| GAATCAGAACCACCTTTATA+TGG | 0.389415 | 2_3:+60330866 | Msa0303160:three_prime_UTR |
| GTGGTTCTTGGGACAATGTA+TGG | 0.393563 | 2_3:+60330436 | Msa0303160:CDS |
| AGCTATGGAGGCGGAGCATT+AGG | 0.394695 | 2_3:+60327222 | Msa0303160:CDS |
| GGCCTGTTCCCGCAAGGCCA+TGG | 0.397295 | 2_3:+60327178 | Msa0303160:CDS |
| CAAACGATGACAAGGTATAA+AGG | 0.404270 | 2_3:-60330688 | None:intergenic |
| AGATTTGTGTTGCGGTTGCT+CGG | 0.405058 | 2_3:+60330273 | Msa0303160:CDS |
| GAACCACTTGGAGCAGCCTT+TGG | 0.405457 | 2_3:-60330420 | None:intergenic |
| GGAGGAATGTATGGCGGCGG+TGG | 0.409120 | 2_3:+60327428 | Msa0303160:CDS |
| AGGCCATGGGAGCAGAACTA+TGG | 0.409351 | 2_3:+60327192 | Msa0303160:CDS |
| GGAATGTATAATAGTGGCCT+TGG | 0.411906 | 2_3:+60327530 | Msa0303160:CDS |
| ATAGAAGTGCAGCTGTCAAC+AGG | 0.419429 | 2_3:+60327142 | Msa0303160:CDS |
| CCTTGATGTGGATATCCATT+TGG | 0.423225 | 2_3:-60330333 | None:intergenic |
| GGGGATGGAGGGGCGCCATA+TGG | 0.428067 | 2_3:-60327626 | None:intergenic |
| GGAATGGGTGGGTATGGCAT+GGG | 0.428128 | 2_3:+60327566 | Msa0303160:CDS |
| ATCGCTCCGGCATGTTGTAT+GGG | 0.429054 | 2_3:+60330241 | Msa0303160:CDS |
| GCTTCAGGGACTGCAAAACC+TGG | 0.429633 | 2_3:+60327099 | Msa0303160:CDS |
| GAAGAAGAAAATAGAAGGAA+AGG | 0.434605 | 2_3:-60326064 | None:intergenic |
| GCCTGTTCCCGCAAGGCCAT+GGG | 0.436282 | 2_3:+60327179 | Msa0303160:CDS |
| ATGGGTGGAATGGGTGGGTA+TGG | 0.437118 | 2_3:+60327560 | Msa0303160:CDS |
| AATGATTTGGTGAATTTAGT+TGG | 0.438093 | 2_3:+60330475 | Msa0303160:exon |
| AAAATCCTGGCGGGGATGGA+GGG | 0.441528 | 2_3:-60327637 | None:intergenic |
| CAAAATCCTGGCGGGGATGG+AGG | 0.442268 | 2_3:-60327638 | None:intergenic |
| TGGCCTTGCGGGAACAGGCC+TGG | 0.442558 | 2_3:-60327175 | None:intergenic |
| AACGACGCCAGTCAATGATT+TGG | 0.445232 | 2_3:+60330462 | Msa0303160:exon |
| GAACGAGCAGGTTCTTCATC+TGG | 0.445992 | 2_3:+60327024 | Msa0303160:CDS |
| TGGAATGGGTGGGTATGGCA+TGG | 0.446511 | 2_3:+60327565 | Msa0303160:CDS |
| GAATGTATAATAGTGGCCTT+GGG | 0.449906 | 2_3:+60327531 | Msa0303160:CDS |
| GGTGGGTATGGCATGGGAGT+TGG | 0.458841 | 2_3:+60327572 | Msa0303160:CDS |
| GGATATGGATCTGGGATGTA+TGG | 0.459083 | 2_3:+60327380 | Msa0303160:CDS |
| TCATGAACAAATGGAATGCC+TGG | 0.459411 | 2_3:-60328300 | None:intergenic |
| GGGCTAGGAGGAGGAATGTA+TGG | 0.464193 | 2_3:+60327419 | Msa0303160:CDS |
| GATTAAGTGATTATTATTGT+TGG | 0.468858 | 2_3:-60326101 | None:intergenic |
| GTGACGTTGTTGAGGCTTCA+GGG | 0.469313 | 2_3:+60327085 | Msa0303160:CDS |
| GTTCCATAGTTCTGCTCCCA+TGG | 0.473107 | 2_3:-60327195 | None:intergenic |
| AAATCCTGGCGGGGATGGAG+GGG | 0.474565 | 2_3:-60327636 | None:intergenic |
| AGCAGGTTCTTCATCTGGTC+CGG | 0.475423 | 2_3:+60327029 | Msa0303160:CDS |
| TATGGTGGCGGGCTAGGAGG+AGG | 0.476228 | 2_3:+60327410 | Msa0303160:CDS |
| CAAGATCCCAATAATCCATA+TGG | 0.477011 | 2_3:+60327611 | Msa0303160:CDS |
| CCTTGATGTGGATATCCATT+CGG | 0.477373 | 2_3:-60330357 | None:intergenic |
| TACGGGTCATCTGGGATGTA+TGG | 0.480642 | 2_3:+60327500 | Msa0303160:CDS |
| GCCTGATGGTTGTTGAGGGT+TGG | 0.483110 | 2_3:-60326271 | None:intergenic |
| GAAAGAAAGAAAGAAAGAAA+GGG | 0.483128 | 2_3:+60326144 | Msa0303160:five_prime_UTR |
| GCATGGCGGTCATGAACAAA+TGG | 0.483410 | 2_3:-60328309 | None:intergenic |
| CTGCAGCTGTTTGATCGCTC+CGG | 0.486884 | 2_3:+60330228 | Msa0303160:intron |
| GATTTGTGTTGCGGTTGCTC+GGG | 0.488923 | 2_3:+60330274 | Msa0303160:CDS |
| GTTAACCCACCAGGTCCAAA+TGG | 0.492989 | 2_3:+60330318 | Msa0303160:CDS |
| GGCGCCCCTCCATCCCCGCC+AGG | 0.493180 | 2_3:+60327632 | Msa0303160:CDS |
| ATCGTTTGCTTTGAATATGC+AGG | 0.493654 | 2_3:+60330703 | Msa0303160:three_prime_UTR |
| ACCTGCCTGATGGTTGTTGA+GGG | 0.497362 | 2_3:-60326275 | None:intergenic |
| ATCACAGAAATCCAAAATCC+TGG | 0.497711 | 2_3:-60327650 | None:intergenic |
| TACCCACCCATTCCACCCAT+TGG | 0.498799 | 2_3:-60327557 | None:intergenic |
| AAGAAGAAAATAGAAGGAAA+GGG | 0.499131 | 2_3:-60326063 | None:intergenic |
| GCGGCCTTTACGGGTCATCT+GGG | 0.501313 | 2_3:+60327492 | Msa0303160:CDS |
| CGATGACAAGGTATAAAGGT+AGG | 0.505121 | 2_3:-60330684 | None:intergenic |
| ATCCAAAATCCTGGCGGGGA+TGG | 0.506195 | 2_3:-60327641 | None:intergenic |
| TATGGATCTTCTTATGGTGG+CGG | 0.507227 | 2_3:+60327398 | Msa0303160:CDS |
| CCCAATAAGGTTAACCCACC+AGG | 0.514994 | 2_3:+60330309 | Msa0303160:CDS |
| AGCTAGCTAGATTTGTGTTG+CGG | 0.519034 | 2_3:+60330265 | Msa0303160:CDS |
| GTAATCCTCCACCAAAACCT+TGG | 0.522026 | 2_3:+60327001 | Msa0303160:CDS |
| GTCCAATGGGTGGAATGGGT+GGG | 0.523980 | 2_3:+60327555 | Msa0303160:CDS |
| CAGAAATCCAAAATCCTGGC+GGG | 0.526442 | 2_3:-60327646 | None:intergenic |
| TAATCCTCCACCAAAACCTT+GGG | 0.526755 | 2_3:+60327002 | Msa0303160:CDS |
| TAATCTTCAACACTCGGACT+CGG | 0.528182 | 2_3:-60326008 | None:intergenic |
| GAAGAACCTGCTCGTTCCCA+AGG | 0.529137 | 2_3:-60327018 | None:intergenic |
| AACTATGGAACTAACAGCTA+TGG | 0.530564 | 2_3:+60327207 | Msa0303160:CDS |
| GGATCTTGCTCACCACCATA+AGG | 0.530634 | 2_3:-60327596 | None:intergenic |
| TGAAGCCTCAACAACGTCAC+TGG | 0.531344 | 2_3:-60327082 | None:intergenic |
| TCAACAGGAATACTCTTGCC+AGG | 0.531855 | 2_3:+60327157 | Msa0303160:CDS |
| GGAGGTGGAATGTATAATAG+TGG | 0.533409 | 2_3:+60327524 | Msa0303160:CDS |
| ACATCCCAGATGACCCGTAA+AGG | 0.534147 | 2_3:-60327496 | None:intergenic |
| TGGTTCTTGGGACAATGTAT+GGG | 0.534845 | 2_3:+60330437 | Msa0303160:CDS |
| TCTGGGATGTATGGAGGAGG+TGG | 0.537919 | 2_3:+60327509 | Msa0303160:CDS |
| ATAATTCTGGATATGGATCT+GGG | 0.538222 | 2_3:+60327372 | Msa0303160:CDS |
| GAGGAATGTATGGCGGCGGT+GGG | 0.540547 | 2_3:+60327429 | Msa0303160:CDS |
| TCTTATGGTGGCGGGCTAGG+AGG | 0.544090 | 2_3:+60327407 | Msa0303160:CDS |
| TCCAACCCTCAACAACCATC+AGG | 0.549627 | 2_3:+60326270 | Msa0303160:CDS |
| CTTCAGGGACTGCAAAACCT+GGG | 0.551647 | 2_3:+60327100 | Msa0303160:CDS |
| TCACTGGTGCTTCCACCTGA+TGG | 0.552065 | 2_3:-60327066 | None:intergenic |
| GTTCTGCTCCCATGGCCTTG+CGG | 0.554289 | 2_3:-60327187 | None:intergenic |
| ATGGATCTTCTTATGGTGGC+GGG | 0.558812 | 2_3:+60327399 | Msa0303160:CDS |
| GATGACAAGGTATAAAGGTA+GGG | 0.562176 | 2_3:-60330683 | None:intergenic |
| AAATTCACCAAATCATTGAC+TGG | 0.563903 | 2_3:-60330469 | None:intergenic |
| TAAAGAGAAGAGAGAATCAT+CGG | 0.573992 | 2_3:+60330528 | Msa0303160:three_prime_UTR |
| GCGGTGGTAACAATTTCCCC+AGG | 0.574200 | 2_3:-60327117 | None:intergenic |
| CCAAAACCTTGGGAACGAGC+AGG | 0.575227 | 2_3:+60327012 | Msa0303160:CDS |
| TTGCCAGGCCTGTTCCCGCA+AGG | 0.576527 | 2_3:+60327172 | Msa0303160:CDS |
| ATCGTTTAATCTTCAACACT+CGG | 0.577893 | 2_3:-60326014 | None:intergenic |
| CCAAATGGATATCCACATCA+AGG | 0.578000 | 2_3:+60330333 | Msa0303160:CDS |
| ATGGGAGTTGGTCCTTATGG+TGG | 0.580815 | 2_3:+60327584 | Msa0303160:CDS |
| AGCAGAGGAGGATATGGAGG+CGG | 0.581294 | 2_3:+60327473 | Msa0303160:intron |
| GATGGCGGTCTAAAAGGTGC+CGG | 0.586310 | 2_3:-60327048 | None:intergenic |
| TAAAACCAAGAACCAATCTA+GGG | 0.586750 | 2_3:-60330626 | None:intergenic |
| AACAGTATGTACAGCAGAGG+AGG | 0.586968 | 2_3:+60327461 | Msa0303160:intron |
| GGATATCCATTTGGACCTGG+TGG | 0.590485 | 2_3:-60330324 | None:intergenic |
| CCGAATGGATATCCACATCA+AGG | 0.592200 | 2_3:+60330357 | Msa0303160:CDS |
| GAACTACATTGAGGCACCAA+AGG | 0.592481 | 2_3:+60330404 | Msa0303160:CDS |
| AACCTGCCTGATGGTTGTTG+AGG | 0.594558 | 2_3:-60326276 | None:intergenic |
| TGGAAATATGAACTACATTG+AGG | 0.595063 | 2_3:+60330395 | Msa0303160:CDS |
| AAGCACCAGTGACGTTGTTG+AGG | 0.597333 | 2_3:+60327077 | Msa0303160:CDS |
| GATATCCATTTGGACCTGGT+GGG | 0.605480 | 2_3:-60330323 | None:intergenic |
| TGTGGATATCCATTTGGACC+TGG | 0.607010 | 2_3:-60330327 | None:intergenic |
| TATCCATTCGGACCTTGATG+TGG | 0.609031 | 2_3:-60330345 | None:intergenic |
| GGGTCATCTGGGATGTATGG+AGG | 0.612746 | 2_3:+60327503 | Msa0303160:CDS |
| TCATCTGGGATGTATGGAGG+AGG | 0.613106 | 2_3:+60327506 | Msa0303160:CDS |
| GGAGGAGGAATGTATGGCGG+CGG | 0.613316 | 2_3:+60327425 | Msa0303160:CDS |
| TATGGAGGCGGAGCATTAGG+TGG | 0.613578 | 2_3:+60327225 | Msa0303160:CDS |
| AGAAATCCAAAATCCTGGCG+GGG | 0.617224 | 2_3:-60327645 | None:intergenic |
| TGAAGGCCAAACCTGAAGCA+TGG | 0.620054 | 2_3:-60328326 | None:intergenic |
| TCCCTCTAATGACAGATGCA+AGG | 0.623000 | 2_3:+60328229 | Msa0303160:intron |
| TATGGAACTAACAGCTATGG+AGG | 0.623963 | 2_3:+60327210 | Msa0303160:CDS |
| TATCCACATCAAGGTCCGAA+TGG | 0.625125 | 2_3:+60330342 | Msa0303160:CDS |
| TCGCTCCGGCATGTTGTATG+GGG | 0.625990 | 2_3:+60330242 | Msa0303160:CDS |
| TTGAATTCACCATATAAAGG+TGG | 0.628043 | 2_3:-60330875 | None:intergenic |
| GAATTGTGTTGTCCTTGATG+TGG | 0.630820 | 2_3:-60330369 | None:intergenic |
| ATTCAAAGCAAACGATGACA+AGG | 0.631389 | 2_3:-60330696 | None:intergenic |
| GACAGCTGCACTTCTATCAG+CGG | 0.631522 | 2_3:-60327136 | None:intergenic |
| AGCTGCACTTCTATCAGCGG+TGG | 0.632546 | 2_3:-60327133 | None:intergenic |
| ATGTATGGATCTTCTTATGG+TGG | 0.634817 | 2_3:+60327395 | Msa0303160:CDS |
| ATGTATAATAGTGGCCTTGG+GGG | 0.637094 | 2_3:+60327533 | Msa0303160:CDS |
| TACAGCAGAGGAGGATATGG+AGG | 0.641000 | 2_3:+60327470 | Msa0303160:intron |
| GGAACTAACAGCTATGGAGG+CGG | 0.643368 | 2_3:+60327213 | Msa0303160:CDS |
| TAGCTCCCCATACAACATGC+CGG | 0.652289 | 2_3:-60330247 | None:intergenic |
| CATGAACAAATGGAATGCCT+GGG | 0.654364 | 2_3:-60328299 | None:intergenic |
| TTCAGGGACTGCAAAACCTG+GGG | 0.655475 | 2_3:+60327101 | Msa0303160:CDS |
| GCACCAAAGGCTGCTCCAAG+TGG | 0.656086 | 2_3:+60330417 | Msa0303160:CDS |
| CTGGTGCTTCCACCTGATGG+CGG | 0.660777 | 2_3:-60327063 | None:intergenic |
| GGTTCTTGGGACAATGTATG+GGG | 0.663209 | 2_3:+60330438 | Msa0303160:CDS |
| ACATTGTCCCAAGAACCACT+TGG | 0.663833 | 2_3:-60330432 | None:intergenic |
| TTGGATTTCTGTGATGCGCG+TGG | 0.668922 | 2_3:+60327658 | Msa0303160:CDS |
| AATGTATAATAGTGGCCTTG+GGG | 0.671966 | 2_3:+60327532 | Msa0303160:CDS |
| CTAATGACAGATGCAAGGTG+TGG | 0.679662 | 2_3:+60328234 | Msa0303160:intron |
| ACAGAAATCCAAAATCCTGG+CGG | 0.699964 | 2_3:-60327647 | None:intergenic |
| ACTCATTGACCAGAACACCC+AGG | 0.704088 | 2_3:+60328282 | Msa0303160:CDS |
| CTAGGAGGAGGAATGTATGG+CGG | 0.720908 | 2_3:+60327422 | Msa0303160:CDS |
| AGGCCAAACCTGAAGCATGG+CGG | 0.759020 | 2_3:-60328323 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTTTTTTATGGATTA+AGG | - | chr2_3:60326557-60326576 | None:intergenic | 10.0% |
| !!! | AAAGTGAATTTTTTTTTTTA+TGG | - | chr2_3:60326564-60326583 | None:intergenic | 10.0% |
| !!! | CATTCATTCATTTAATTTAA+TGG | + | chr2_3:60326245-60326264 | Msa0303160:exon | 15.0% |
| !! | GATTTAAATTAATAGAAAAG+AGG | - | chr2_3:60326314-60326333 | None:intergenic | 15.0% |
| !! | GTGTTAAATTAAAAAGAAAA+AGG | - | chr2_3:60326535-60326554 | None:intergenic | 15.0% |
| !! | TCATATTAAAATAATCCAAA+GGG | - | chr2_3:60328145-60328164 | None:intergenic | 15.0% |
| !! | TTCATATTAAAATAATCCAA+AGG | - | chr2_3:60328146-60328165 | None:intergenic | 15.0% |
| !! | GAATCACAATTATAAAATAA+TGG | - | chr2_3:60328758-60328777 | None:intergenic | 15.0% |
| !!! | TTATTTCTAGTATCAAATTA+TGG | + | chr2_3:60329722-60329741 | Msa0303160:intron | 15.0% |
| !! | AAATTGTATAATGTTAATTG+AGG | + | chr2_3:60329767-60329786 | Msa0303160:intron | 15.0% |
| !! | GATTAAGTGATTATTATTGT+TGG | - | chr2_3:60326104-60326123 | None:intergenic | 20.0% |
| !! | AAGTAAAATCATTGTGAAAT+GGG | - | chr2_3:60326955-60326974 | None:intergenic | 20.0% |
| !! | AAAGTAAAATCATTGTGAAA+TGG | - | chr2_3:60326956-60326975 | None:intergenic | 20.0% |
| !! | TCAACAATGAATTATAATTC+TGG | + | chr2_3:60327359-60327378 | Msa0303160:CDS | 20.0% |
| !! | ATGAATTATAATTCTGGATA+TGG | + | chr2_3:60327365-60327384 | Msa0303160:CDS | 20.0% |
| !!! | AACATTGTGTATTTGTTTTT+AGG | + | chr2_3:60328054-60328073 | Msa0303160:intron | 20.0% |
| !!! | ACATTGTGTATTTGTTTTTA+GGG | + | chr2_3:60328055-60328074 | Msa0303160:intron | 20.0% |
| !!! | TTCAATCTTTAAAAAACCAT+GGG | - | chr2_3:60328400-60328419 | None:intergenic | 20.0% |
| !!! | TTTCAATCTTTAAAAAACCA+TGG | - | chr2_3:60328401-60328420 | None:intergenic | 20.0% |
| !!! | TGGTTTTGGATTTTTTTTTA+TGG | + | chr2_3:60328519-60328538 | Msa0303160:intron | 20.0% |
| !!! | TATTTTACTTTTCCAATGTT+AGG | - | chr2_3:60329239-60329258 | None:intergenic | 20.0% |
| !! | TTTACTTCATACAAAAACAA+CGG | - | chr2_3:60329541-60329560 | None:intergenic | 20.0% |
| !!! | GAAAAGTTGATTTGTTAAAT+AGG | - | chr2_3:60329637-60329656 | None:intergenic | 20.0% |
| !!! | AACAAATCAACTTTTCATAT+TGG | + | chr2_3:60329641-60329660 | Msa0303160:intron | 20.0% |
| !! | ATCAAAATGAATATCACAAA+AGG | - | chr2_3:60330089-60330108 | None:intergenic | 20.0% |
| !!! | TTTAATTTTAGATGATCACT+TGG | + | chr2_3:60330199-60330218 | Msa0303160:intron | 20.0% |
| !! | ACAAAAATAATACATGTACT+TGG | - | chr2_3:60330741-60330760 | None:intergenic | 20.0% |
| !! | ATCAAAAGAAATGCAATTTA+AGG | - | chr2_3:60330812-60330831 | None:intergenic | 20.0% |
| ! | AAGAAGAAAATAGAAGGAAA+GGG | - | chr2_3:60326066-60326085 | None:intergenic | 25.0% |
| ! | AAGAAGAAGAAGAAAATAGA+AGG | - | chr2_3:60326072-60326091 | None:intergenic | 25.0% |
| ! | AGAAAGAAAGAAAGAAAGAA+AGG | + | chr2_3:60326143-60326162 | Msa0303160:five_prime_UTR | 25.0% |
| ! | GAAAGAAAGAAAGAAAGAAA+GGG | + | chr2_3:60326140-60326159 | Msa0303160:five_prime_UTR | 25.0% |
| ! | ATATCGCTTAATCGAATATA+TGG | + | chr2_3:60326178-60326197 | Msa0303160:five_prime_UTR | 25.0% |
| ! | TTTAAATCATCATTCTCTGT+TGG | + | chr2_3:60326326-60326345 | Msa0303160:intron | 25.0% |
| ! | TAATGAATTGATGTGGTAAA+CGG | - | chr2_3:60326368-60326387 | None:intergenic | 25.0% |
| ! | ACAATTGTAATGAATTGATG+TGG | - | chr2_3:60326375-60326394 | None:intergenic | 25.0% |
| ! | ATTGAAACGAAAAAGAACAA+GGG | - | chr2_3:60326433-60326452 | None:intergenic | 25.0% |
| ! | AATTGAAACGAAAAAGAACA+AGG | - | chr2_3:60326434-60326453 | None:intergenic | 25.0% |
| ! | ATTCCTGGTATAATAAATCA+AGG | + | chr2_3:60326592-60326611 | Msa0303160:intron | 25.0% |
| ! | TTCCTGGTATAATAAATCAA+GGG | + | chr2_3:60326593-60326612 | Msa0303160:intron | 25.0% |
| !! | TATTGTCTTTGTTGTAGAAA+CGG | - | chr2_3:60326701-60326720 | None:intergenic | 25.0% |
| ! | ACTAATTTGAGCTTATCTAA+TGG | - | chr2_3:60326851-60326870 | None:intergenic | 25.0% |
| ! | TTTATAGTATCACACATTGA+GGG | - | chr2_3:60326888-60326907 | None:intergenic | 25.0% |
| !!! | TTATTTTTCTTACAATCTGC+AGG | + | chr2_3:60327329-60327348 | Msa0303160:intron | 25.0% |
| !!! | TAAGTTCCAAAAGTATCATA+TGG | - | chr2_3:60327688-60327707 | None:intergenic | 25.0% |
| !!! | GAACTTATTTTTTCTTCCAT+GGG | + | chr2_3:60327701-60327720 | Msa0303160:intron | 25.0% |
| ! | TTTCCGATTAAACTGTATTT+AGG | + | chr2_3:60327838-60327857 | Msa0303160:intron | 25.0% |
| ! | TGTCCTAAATACAGTTTAAT+CGG | - | chr2_3:60327844-60327863 | None:intergenic | 25.0% |
| !! | AGGACAATATATTTTGTCTT+TGG | + | chr2_3:60327858-60327877 | Msa0303160:intron | 25.0% |
| ! | TAACTAATATCATGAACATG+AGG | - | chr2_3:60327910-60327929 | None:intergenic | 25.0% |
| ! | TCATGTTCATGATATTAGTT+AGG | + | chr2_3:60327909-60327928 | Msa0303160:intron | 25.0% |
| ! | ATAAACAAATCACAAGAAAG+AGG | - | chr2_3:60328356-60328375 | None:intergenic | 25.0% |
| ! | TTTAAAAAACCATGGGAAAT+GGG | - | chr2_3:60328393-60328412 | None:intergenic | 25.0% |
| !!! | GAATTGTGATTTTTTTGCTT+TGG | + | chr2_3:60328466-60328485 | Msa0303160:intron | 25.0% |
| !! | TTTTTATGGTTATCAAACTC+AGG | + | chr2_3:60328533-60328552 | Msa0303160:intron | 25.0% |
| !! | TTTTATGGTTATCAAACTCA+GGG | + | chr2_3:60328534-60328553 | Msa0303160:intron | 25.0% |
| ! | AAATTCACAAATCATGAGAT+AGG | - | chr2_3:60328733-60328752 | None:intergenic | 25.0% |
| ! | CCAATATATTAAACTCAGAT+GGG | - | chr2_3:60328810-60328829 | None:intergenic | 25.0% |
| ! | ACCAATATATTAAACTCAGA+TGG | - | chr2_3:60328811-60328830 | None:intergenic | 25.0% |
| ! | AATTCTGTTATATACTTCGA+TGG | + | chr2_3:60328904-60328923 | Msa0303160:intron | 25.0% |
| ! | TAGTATCAAATTATGGAAAC+AGG | + | chr2_3:60329729-60329748 | Msa0303160:intron | 25.0% |
| ! | ATCATTGAATCGATGTTATA+TGG | + | chr2_3:60329810-60329829 | Msa0303160:intron | 25.0% |
| ! | ATAAAATGCAATTATGGAAC+GGG | - | chr2_3:60330161-60330180 | None:intergenic | 25.0% |
| ! | GATAAAATGCAATTATGGAA+CGG | - | chr2_3:60330162-60330181 | None:intergenic | 25.0% |
| ! | CACATGATAAAATGCAATTA+TGG | - | chr2_3:60330167-60330186 | None:intergenic | 25.0% |
| !!! | AATGATTTGGTGAATTTAGT+TGG | + | chr2_3:60330475-60330494 | Msa0303160:exon | 25.0% |
| ATCGTTTAATCTTCAACACT+CGG | - | chr2_3:60326017-60326036 | None:intergenic | 30.0% | |
| GAAGAAGAAAATAGAAGGAA+AGG | - | chr2_3:60326067-60326086 | None:intergenic | 30.0% | |
| AAAGAAAGAAAGAAAGGGTT+TGG | + | chr2_3:60326149-60326168 | Msa0303160:five_prime_UTR | 30.0% | |
| ! | AAAAGAACAAGGGGATTTTA+GGG | - | chr2_3:60326423-60326442 | None:intergenic | 30.0% |
| ! | AAAAAGAACAAGGGGATTTT+AGG | - | chr2_3:60326424-60326443 | None:intergenic | 30.0% |
| TTGAAACGAAAAAGAACAAG+GGG | - | chr2_3:60326432-60326451 | None:intergenic | 30.0% | |
| GATTGAAATTGAACTACGAT+TGG | - | chr2_3:60326491-60326510 | None:intergenic | 30.0% | |
| !!! | TCACTTTTTTTCTTCATTCC+TGG | + | chr2_3:60326577-60326596 | Msa0303160:intron | 30.0% |
| AATAAGCTGTTTATCCAAAC+AGG | - | chr2_3:60326647-60326666 | None:intergenic | 30.0% | |
| GAACTTACAAAAACAGCTTA+TGG | - | chr2_3:60326814-60326833 | None:intergenic | 30.0% | |
| CAAATTAGTCAAATCCTAAC+AGG | + | chr2_3:60326862-60326881 | Msa0303160:intron | 30.0% | |
| CTTTATAGTATCACACATTG+AGG | - | chr2_3:60326889-60326908 | None:intergenic | 30.0% | |
| TTGTAGTTCATTATTGAACG+TGG | + | chr2_3:60326928-60326947 | Msa0303160:intron | 30.0% | |
| CAAACAAGGAAAATGTTGAA+AGG | - | chr2_3:60327282-60327301 | None:intergenic | 30.0% | |
| TACAAAAGATCACGTGAAAT+AGG | - | chr2_3:60327305-60327324 | None:intergenic | 30.0% | |
| TATAATTCTGGATATGGATC+TGG | + | chr2_3:60327371-60327390 | Msa0303160:CDS | 30.0% | |
| ATAATTCTGGATATGGATCT+GGG | + | chr2_3:60327372-60327391 | Msa0303160:CDS | 30.0% | |
| !!! | GGAACTTATTTTTTCTTCCA+TGG | + | chr2_3:60327700-60327719 | Msa0303160:intron | 30.0% |
| ATGTTGATCAATTATTCCCA+TGG | - | chr2_3:60327720-60327739 | None:intergenic | 30.0% | |
| TAATTGATCAACATGTACCA+TGG | + | chr2_3:60327726-60327745 | Msa0303160:intron | 30.0% | |
| !!! | TTTTTCCCGTTTTGTTTAAC+TGG | + | chr2_3:60327755-60327774 | Msa0303160:intron | 30.0% |
| ACAATCCAGTTAAACAAAAC+GGG | - | chr2_3:60327763-60327782 | None:intergenic | 30.0% | |
| CACAATCCAGTTAAACAAAA+CGG | - | chr2_3:60327764-60327783 | None:intergenic | 30.0% | |
| ! | TGACATTTTCATGTTTGCAA+TGG | + | chr2_3:60327810-60327829 | Msa0303160:intron | 30.0% |
| TCATGATATTAGTTAGGAGT+AGG | + | chr2_3:60327915-60327934 | Msa0303160:intron | 30.0% | |
| GATACAAAGAGTTTCATTAC+AGG | - | chr2_3:60327997-60328016 | None:intergenic | 30.0% | |
| AATCCAAAGGGAAAAAAAAG+AGG | - | chr2_3:60328133-60328152 | None:intergenic | 30.0% | |
| !!! | CAAGGTGTGGTTAATTTTTT+CGG | + | chr2_3:60328247-60328266 | Msa0303160:CDS | 30.0% |
| ! | CTTTAAAAAACCATGGGAAA+TGG | - | chr2_3:60328394-60328413 | None:intergenic | 30.0% |
| CACTAAAGCTTATACATACA+AGG | + | chr2_3:60328494-60328513 | Msa0303160:intron | 30.0% | |
| AAGCTTATACATACAAGGAT+TGG | + | chr2_3:60328499-60328518 | Msa0303160:intron | 30.0% | |
| !!! | ATACATACAAGGATTGGTTT+TGG | + | chr2_3:60328505-60328524 | Msa0303160:intron | 30.0% |
| CCCATCTGAGTTTAATATAT+TGG | + | chr2_3:60328807-60328826 | Msa0303160:intron | 30.0% | |
| AGCAAATCATAATACCGAAT+TGG | - | chr2_3:60328840-60328859 | None:intergenic | 30.0% | |
| !!! | CGTGGTTTAGTTTTTGTAAA+AGG | + | chr2_3:60329013-60329032 | Msa0303160:intron | 30.0% |
| ! | AAAGTTGTCCAAAAAGTATG+CGG | + | chr2_3:60329664-60329683 | Msa0303160:intron | 30.0% |
| ! | TATTTCCTGATAATGTCCAA+AGG | - | chr2_3:60329702-60329721 | None:intergenic | 30.0% |
| ATAATGTTAATTGAGGTTCG+TGG | + | chr2_3:60329774-60329793 | Msa0303160:intron | 30.0% | |
| CGATTCAATGATTCTTAAAC+TGG | - | chr2_3:60329802-60329821 | None:intergenic | 30.0% | |
| ! | GTCTGGATACAAACATTTTA+AGG | + | chr2_3:60329884-60329903 | Msa0303160:intron | 30.0% |
| TGATGAACAACAACATATTC+AGG | + | chr2_3:60329923-60329942 | Msa0303160:intron | 30.0% | |
| !!! | CTTTTTTTCTTCAGAAAAGC+AGG | - | chr2_3:60329970-60329989 | None:intergenic | 30.0% |
| AAGGTAAAATGAGTGCAATT+TGG | - | chr2_3:60330004-60330023 | None:intergenic | 30.0% | |
| TGGAAATATGAACTACATTG+AGG | + | chr2_3:60330395-60330414 | Msa0303160:CDS | 30.0% | |
| AAATTCACCAAATCATTGAC+TGG | - | chr2_3:60330472-60330491 | None:intergenic | 30.0% | |
| TAAAGAGAAGAGAGAATCAT+CGG | + | chr2_3:60330528-60330547 | Msa0303160:three_prime_UTR | 30.0% | |
| TAAAACCAAGAACCAATCTA+GGG | - | chr2_3:60330629-60330648 | None:intergenic | 30.0% | |
| TTGAATTCACCATATAAAGG+TGG | - | chr2_3:60330878-60330897 | None:intergenic | 30.0% | |
| ! | AGAAAGAAAGGGTTTGGAAT+TGG | + | chr2_3:60326155-60326174 | Msa0303160:five_prime_UTR | 35.0% |
| TAGAAAAGAGGAGAAAGAGA+AGG | - | chr2_3:60326302-60326321 | None:intergenic | 35.0% | |
| !! | GTCTCTATCATCGATTTCTT+CGG | + | chr2_3:60326395-60326414 | Msa0303160:intron | 35.0% |
| TAGAAACGGCTATAGAAAAG+TGG | - | chr2_3:60326687-60326706 | None:intergenic | 35.0% | |
| AACTATGGAACTAACAGCTA+TGG | + | chr2_3:60327207-60327226 | Msa0303160:CDS | 35.0% | |
| TTCTTACAATCTGCAGGATA+CGG | + | chr2_3:60327335-60327354 | Msa0303160:intron | 35.0% | |
| ATGTATGGATCTTCTTATGG+TGG | + | chr2_3:60327395-60327414 | Msa0303160:CDS | 35.0% | |
| GAATGTATAATAGTGGCCTT+GGG | + | chr2_3:60327531-60327550 | Msa0303160:CDS | 35.0% | |
| ! | AATGTATAATAGTGGCCTTG+GGG | + | chr2_3:60327532-60327551 | Msa0303160:CDS | 35.0% |
| CAAGATCCCAATAATCCATA+TGG | + | chr2_3:60327611-60327630 | Msa0303160:CDS | 35.0% | |
| ATCACAGAAATCCAAAATCC+TGG | - | chr2_3:60327653-60327672 | None:intergenic | 35.0% | |
| ! | GGTAAGCCATATGATACTTT+TGG | + | chr2_3:60327679-60327698 | Msa0303160:intron | 35.0% |
| TCATATGCAGCTTTACTAAC+TGG | - | chr2_3:60328029-60328048 | None:intergenic | 35.0% | |
| AAAAAAGAGGAGAGAAGCAA+TGG | - | chr2_3:60328120-60328139 | None:intergenic | 35.0% | |
| !!! | TCTCCTCTTTTTTTTCCCTT+TGG | + | chr2_3:60328127-60328146 | Msa0303160:intron | 35.0% |
| ACATGTACCAAGCATATTTG+CGG | - | chr2_3:60328199-60328218 | None:intergenic | 35.0% | |
| !!! | GTGTGGTTAATTTTTTCGGT+CGG | + | chr2_3:60328251-60328270 | Msa0303160:CDS | 35.0% |
| ! | ACAAGGTTTAAAACGAGTGA+AGG | - | chr2_3:60328636-60328655 | None:intergenic | 35.0% |
| !! | ACTCGTTTTAAACCTTGTGA+CGG | + | chr2_3:60328638-60328657 | Msa0303160:intron | 35.0% |
| CATAACAGGTTCAAAGTCTA+TGG | - | chr2_3:60328678-60328697 | None:intergenic | 35.0% | |
| GCGCATAAAAATAGCATAAC+AGG | - | chr2_3:60328692-60328711 | None:intergenic | 35.0% | |
| CTATGTTTGTGCATTTGTGT+TGG | + | chr2_3:60328777-60328796 | Msa0303160:intron | 35.0% | |
| ! | ATATTGGTTGCTGTCCAATT+CGG | + | chr2_3:60328823-60328842 | Msa0303160:intron | 35.0% |
| TGAATTCTGTGACTATGCAA+CGG | - | chr2_3:60328939-60328958 | None:intergenic | 35.0% | |
| ! | TTTTGTAAAAGGTGAACCAG+TGG | + | chr2_3:60329024-60329043 | Msa0303160:intron | 35.0% |
| ACTCTTCTATCCCTGTTATA+TGG | - | chr2_3:60329108-60329127 | None:intergenic | 35.0% | |
| ATGCACAGTGTTAAATGCTT+TGG | + | chr2_3:60329173-60329192 | Msa0303160:intron | 35.0% | |
| ! | TTTTCCAATGTTAGGTCACT+TGG | - | chr2_3:60329231-60329250 | None:intergenic | 35.0% |
| ATCTATAATCCGGTACGTTA+GGG | - | chr2_3:60329450-60329469 | None:intergenic | 35.0% | |
| TATCTATAATCCGGTACGTT+AGG | - | chr2_3:60329451-60329470 | None:intergenic | 35.0% | |
| TTCGCCATCTATCTATAATC+CGG | - | chr2_3:60329460-60329479 | None:intergenic | 35.0% | |
| GAAGATCTTACGAGTTTATG+CGG | + | chr2_3:60329589-60329608 | Msa0303160:intron | 35.0% | |
| GTTATCCTTTGGACATTATC+AGG | + | chr2_3:60329694-60329713 | Msa0303160:intron | 35.0% | |
| !! | TTGTGATGTGTTAACTTGTC+TGG | + | chr2_3:60329867-60329886 | Msa0303160:intron | 35.0% |
| GATCAAAACTAAGCCCAATA+AGG | + | chr2_3:60330296-60330315 | Msa0303160:CDS | 35.0% | |
| !! | CTGTTTTTCTTTCCCTAGAT+TGG | + | chr2_3:60330614-60330633 | Msa0303160:three_prime_UTR | 35.0% |
| GTAAAACCAAGAACCAATCT+AGG | - | chr2_3:60330630-60330649 | None:intergenic | 35.0% | |
| !!! | AGATTGGTTCTTGGTTTTAC+TGG | + | chr2_3:60330630-60330649 | Msa0303160:three_prime_UTR | 35.0% |
| GATGACAAGGTATAAAGGTA+GGG | - | chr2_3:60330686-60330705 | None:intergenic | 35.0% | |
| CAAACGATGACAAGGTATAA+AGG | - | chr2_3:60330691-60330710 | None:intergenic | 35.0% | |
| ATTCAAAGCAAACGATGACA+AGG | - | chr2_3:60330699-60330718 | None:intergenic | 35.0% | |
| ! | ATCGTTTGCTTTGAATATGC+AGG | + | chr2_3:60330703-60330722 | Msa0303160:three_prime_UTR | 35.0% |
| GAATCAGAACCACCTTTATA+TGG | + | chr2_3:60330866-60330885 | Msa0303160:three_prime_UTR | 35.0% | |
| CGCTTGAATTCACCATATAA+AGG | - | chr2_3:60330881-60330900 | None:intergenic | 35.0% | |
| TAATCTTCAACACTCGGACT+CGG | - | chr2_3:60326011-60326030 | None:intergenic | 40.0% | |
| ! | ATCAGAGAGATTGCTTGTTG+TGG | + | chr2_3:60326508-60326527 | Msa0303160:intron | 40.0% |
| !! | TCAGAGAGATTGCTTGTTGT+GGG | + | chr2_3:60326509-60326528 | Msa0303160:intron | 40.0% |
| GGCCCTTGATTTATTATACC+AGG | - | chr2_3:60326598-60326617 | None:intergenic | 40.0% | |
| TTCTTCTTCTCACAACAGCT+GGG | - | chr2_3:60326623-60326642 | None:intergenic | 40.0% | |
| ATTCTTCTTCTCACAACAGC+TGG | - | chr2_3:60326624-60326643 | None:intergenic | 40.0% | |
| GTGAGAAGAAGAATCCTGTT+TGG | + | chr2_3:60326630-60326649 | Msa0303160:intron | 40.0% | |
| TAATCCTCCACCAAAACCTT+GGG | + | chr2_3:60327002-60327021 | Msa0303160:CDS | 40.0% | |
| TATGGAACTAACAGCTATGG+AGG | + | chr2_3:60327210-60327229 | Msa0303160:CDS | 40.0% | |
| TCACGTGAAATAGGCAAACA+AGG | - | chr2_3:60327296-60327315 | None:intergenic | 40.0% | |
| GGGATGTATGGATCTTCTTA+TGG | + | chr2_3:60327392-60327411 | Msa0303160:CDS | 40.0% | |
| TATGGATCTTCTTATGGTGG+CGG | + | chr2_3:60327398-60327417 | Msa0303160:CDS | 40.0% | |
| GGAGGTGGAATGTATAATAG+TGG | + | chr2_3:60327524-60327543 | Msa0303160:CDS | 40.0% | |
| GGAATGTATAATAGTGGCCT+TGG | + | chr2_3:60327530-60327549 | Msa0303160:CDS | 40.0% | |
| ! | ATGTATAATAGTGGCCTTGG+GGG | + | chr2_3:60327533-60327552 | Msa0303160:CDS | 40.0% |
| ACAGAAATCCAAAATCCTGG+CGG | - | chr2_3:60327650-60327669 | None:intergenic | 40.0% | |
| AACGGGAAAAACATTGACCA+TGG | - | chr2_3:60327746-60327765 | None:intergenic | 40.0% | |
| TTGTTGTCCGCAAATATGCT+TGG | + | chr2_3:60328189-60328208 | Msa0303160:intron | 40.0% | |
| ACCTTGCATCTGTCATTAGA+GGG | - | chr2_3:60328233-60328252 | None:intergenic | 40.0% | |
| CATGAACAAATGGAATGCCT+GGG | - | chr2_3:60328302-60328321 | None:intergenic | 40.0% | |
| TCATGAACAAATGGAATGCC+TGG | - | chr2_3:60328303-60328322 | None:intergenic | 40.0% | |
| CACAAGAAAGAGGACAATGA+AGG | - | chr2_3:60328346-60328365 | None:intergenic | 40.0% | |
| AATTGTGTACCCATTTCCCA+TGG | + | chr2_3:60328381-60328400 | Msa0303160:intron | 40.0% | |
| ! | TAAAACGAGTGAAGGTTGGT+GGG | - | chr2_3:60328628-60328647 | None:intergenic | 40.0% |
| TTAAAACGAGTGAAGGTTGG+TGG | - | chr2_3:60328629-60328648 | None:intergenic | 40.0% | |
| ! | GGTTTAAAACGAGTGAAGGT+TGG | - | chr2_3:60328632-60328651 | None:intergenic | 40.0% |
| AACCACGAATTTGTACGAAC+CGG | - | chr2_3:60329000-60329019 | None:intergenic | 40.0% | |
| AGAAAACGGTGAAGATGATG+CGG | + | chr2_3:60329071-60329090 | Msa0303160:intron | 40.0% | |
| TTCTCTCTCCTCCATATAAC+AGG | + | chr2_3:60329094-60329113 | Msa0303160:intron | 40.0% | |
| TCTCTCTCCTCCATATAACA+GGG | + | chr2_3:60329095-60329114 | Msa0303160:intron | 40.0% | |
| CTTCTATCCCTGTTATATGG+AGG | - | chr2_3:60329105-60329124 | None:intergenic | 40.0% | |
| TCTATAATCCGGTACGTTAG+GGG | - | chr2_3:60329449-60329468 | None:intergenic | 40.0% | |
| CGTACCGGATTATAGATAGA+TGG | + | chr2_3:60329453-60329472 | Msa0303160:intron | 40.0% | |
| ! | CAGTTTCACCGCATACTTTT+TGG | - | chr2_3:60329675-60329694 | None:intergenic | 40.0% |
| !! | AAGCAGGACAAAGTTGCTTT+TGG | - | chr2_3:60329954-60329973 | None:intergenic | 40.0% |
| TCAAGCAGTATGTGCTCAAA+AGG | - | chr2_3:60330023-60330042 | None:intergenic | 40.0% | |
| TTCTTTGAACTTGCCAACAC+TGG | + | chr2_3:60330132-60330151 | Msa0303160:intron | 40.0% | |
| TCTTTGAACTTGCCAACACT+GGG | + | chr2_3:60330133-60330152 | Msa0303160:intron | 40.0% | |
| AGCTAGCTAGATTTGTGTTG+CGG | + | chr2_3:60330265-60330284 | Msa0303160:CDS | 40.0% | |
| CCTTGATGTGGATATCCATT+TGG | - | chr2_3:60330336-60330355 | None:intergenic | 40.0% | |
| CCAAATGGATATCCACATCA+AGG | + | chr2_3:60330333-60330352 | Msa0303160:CDS | 40.0% | |
| CCTTGATGTGGATATCCATT+CGG | - | chr2_3:60330336-60330355 | None:intergenic | 40.0% | |
| GAATTGTGTTGTCCTTGATG+TGG | - | chr2_3:60330372-60330391 | None:intergenic | 40.0% | |
| CAAGGACAACACAATTCTTC+TGG | + | chr2_3:60330375-60330394 | Msa0303160:CDS | 40.0% | |
| TGGTTCTTGGGACAATGTAT+GGG | + | chr2_3:60330437-60330456 | Msa0303160:CDS | 40.0% | |
| ! | TCTTTCCCTAGATTGGTTCT+TGG | + | chr2_3:60330621-60330640 | Msa0303160:three_prime_UTR | 40.0% |
| !!! | GTTCTTGGTTTTACTGGAAG+CGG | + | chr2_3:60330636-60330655 | Msa0303160:three_prime_UTR | 40.0% |
| !!! | TTCTTGGTTTTACTGGAAGC+GGG | + | chr2_3:60330637-60330656 | Msa0303160:three_prime_UTR | 40.0% |
| CGATGACAAGGTATAAAGGT+AGG | - | chr2_3:60330687-60330706 | None:intergenic | 40.0% | |
| ! | GCATAACTGCTGAAGTTTTG+TGG | + | chr2_3:60330782-60330801 | Msa0303160:three_prime_UTR | 40.0% |
| GTAATCCTCCACCAAAACCT+TGG | + | chr2_3:60327001-60327020 | Msa0303160:CDS | 45.0% | |
| ! | ATAGAAGTGCAGCTGTCAAC+AGG | + | chr2_3:60327142-60327161 | Msa0303160:CDS | 45.0% |
| TCAACAGGAATACTCTTGCC+AGG | + | chr2_3:60327157-60327176 | Msa0303160:CDS | 45.0% | |
| ! | GGATATGGATCTGGGATGTA+TGG | + | chr2_3:60327380-60327399 | Msa0303160:CDS | 45.0% |
| ATGGATCTTCTTATGGTGGC+GGG | + | chr2_3:60327399-60327418 | Msa0303160:CDS | 45.0% | |
| GGTAACAGTATGTACAGCAG+AGG | + | chr2_3:60327458-60327477 | Msa0303160:intron | 45.0% | |
| AACAGTATGTACAGCAGAGG+AGG | + | chr2_3:60327461-60327480 | Msa0303160:intron | 45.0% | |
| ATGTACAGCAGAGGAGGATA+TGG | + | chr2_3:60327467-60327486 | Msa0303160:intron | 45.0% | |
| AGAAATCCAAAATCCTGGCG+GGG | - | chr2_3:60327648-60327667 | None:intergenic | 45.0% | |
| CAGAAATCCAAAATCCTGGC+GGG | - | chr2_3:60327649-60327668 | None:intergenic | 45.0% | |
| GATTTCCTGTGAGCAATGTG+AGG | + | chr2_3:60327937-60327956 | Msa0303160:intron | 45.0% | |
| CACTCTTCTTACTCTTACCG+TGG | + | chr2_3:60328090-60328109 | Msa0303160:intron | 45.0% | |
| AAAGAGGAGAGAAGCAATGG+TGG | - | chr2_3:60328117-60328136 | None:intergenic | 45.0% | |
| TCCCTCTAATGACAGATGCA+AGG | + | chr2_3:60328229-60328248 | Msa0303160:intron | 45.0% | |
| CACCTTGCATCTGTCATTAG+AGG | - | chr2_3:60328234-60328253 | None:intergenic | 45.0% | |
| CTAATGACAGATGCAAGGTG+TGG | + | chr2_3:60328234-60328253 | Msa0303160:intron | 45.0% | |
| AGCTAGAACGCATCAGAGTT+GGG | - | chr2_3:60328568-60328587 | None:intergenic | 45.0% | |
| AAGTTGACAACTCCGTCACA+AGG | - | chr2_3:60328653-60328672 | None:intergenic | 45.0% | |
| !! | AATTGGTTCGCGGTTCTCAT+GGG | - | chr2_3:60328969-60328988 | None:intergenic | 45.0% |
| CGAATTTGTACGAACCGGTA+CGG | - | chr2_3:60328995-60329014 | None:intergenic | 45.0% | |
| !! | TACCGGTTCGTACAAATTCG+TGG | + | chr2_3:60328995-60329014 | Msa0303160:intron | 45.0% |
| TGTAAAAGGTGAACCAGTGG+CGG | + | chr2_3:60329027-60329046 | Msa0303160:intron | 45.0% | |
| GCTTCAAGCCACAGAGAAAA+CGG | + | chr2_3:60329057-60329076 | Msa0303160:intron | 45.0% | |
| ! | CATCTTCACCGTTTTCTCTG+TGG | - | chr2_3:60329068-60329087 | None:intergenic | 45.0% |
| CAATGTTAGGTCACTTGGAC+TGG | - | chr2_3:60329226-60329245 | None:intergenic | 45.0% | |
| CAGTCCAAGTGACCTAACAT+TGG | + | chr2_3:60329224-60329243 | Msa0303160:intron | 45.0% | |
| AACAACGGATCATAGTCACC+AGG | - | chr2_3:60329526-60329545 | None:intergenic | 45.0% | |
| GCGGTGAAACTGTTATCCTT+TGG | + | chr2_3:60329683-60329702 | Msa0303160:intron | 45.0% | |
| AGATTTGTGTTGCGGTTGCT+CGG | + | chr2_3:60330273-60330292 | Msa0303160:CDS | 45.0% | |
| !! | CCTGGTGGGTTAACCTTATT+GGG | - | chr2_3:60330312-60330331 | None:intergenic | 45.0% |
| !! | ACCTGGTGGGTTAACCTTAT+TGG | - | chr2_3:60330313-60330332 | None:intergenic | 45.0% |
| GATATCCATTTGGACCTGGT+GGG | - | chr2_3:60330326-60330345 | None:intergenic | 45.0% | |
| TGTGGATATCCATTTGGACC+TGG | - | chr2_3:60330330-60330349 | None:intergenic | 45.0% | |
| TATCCACATCAAGGTCCGAA+TGG | + | chr2_3:60330342-60330361 | Msa0303160:CDS | 45.0% | |
| TATCCATTCGGACCTTGATG+TGG | - | chr2_3:60330348-60330367 | None:intergenic | 45.0% | |
| CCGAATGGATATCCACATCA+AGG | + | chr2_3:60330357-60330376 | Msa0303160:CDS | 45.0% | |
| ! | GAACTACATTGAGGCACCAA+AGG | + | chr2_3:60330404-60330423 | Msa0303160:CDS | 45.0% |
| ACATTGTCCCAAGAACCACT+TGG | - | chr2_3:60330435-60330454 | None:intergenic | 45.0% | |
| GTGGTTCTTGGGACAATGTA+TGG | + | chr2_3:60330436-60330455 | Msa0303160:CDS | 45.0% | |
| GGTTCTTGGGACAATGTATG+GGG | + | chr2_3:60330438-60330457 | Msa0303160:CDS | 45.0% | |
| AACGACGCCAGTCAATGATT+TGG | + | chr2_3:60330462-60330481 | Msa0303160:exon | 45.0% | |
| !! | TATTAAATATTAAAAAGAAA+GGG | - | chr2_3:60329285-60329304 | None:intergenic | 5.0% |
| !! | TTATTAAATATTAAAAAGAA+AGG | - | chr2_3:60329286-60329305 | None:intergenic | 5.0% |
| TCCAACCCTCAACAACCATC+AGG | + | chr2_3:60326270-60326289 | Msa0303160:CDS | 50.0% | |
| ACCTGCCTGATGGTTGTTGA+GGG | - | chr2_3:60326278-60326297 | None:intergenic | 50.0% | |
| AACCTGCCTGATGGTTGTTG+AGG | - | chr2_3:60326279-60326298 | None:intergenic | 50.0% | |
| AAGAGAAGGAACCTGCCTGA+TGG | - | chr2_3:60326288-60326307 | None:intergenic | 50.0% | |
| TCTTCTCACAACAGCTGGGA+AGG | - | chr2_3:60326619-60326638 | None:intergenic | 50.0% | |
| TCACACATTGAGGGCCTGTT+AGG | - | chr2_3:60326879-60326898 | None:intergenic | 50.0% | |
| GAACGAGCAGGTTCTTCATC+TGG | + | chr2_3:60327024-60327043 | Msa0303160:CDS | 50.0% | |
| AGCAGGTTCTTCATCTGGTC+CGG | + | chr2_3:60327029-60327048 | Msa0303160:CDS | 50.0% | |
| AAGCACCAGTGACGTTGTTG+AGG | + | chr2_3:60327077-60327096 | Msa0303160:CDS | 50.0% | |
| TGAAGCCTCAACAACGTCAC+TGG | - | chr2_3:60327085-60327104 | None:intergenic | 50.0% | |
| AGTGACGTTGTTGAGGCTTC+AGG | + | chr2_3:60327084-60327103 | Msa0303160:CDS | 50.0% | |
| GTGACGTTGTTGAGGCTTCA+GGG | + | chr2_3:60327085-60327104 | Msa0303160:CDS | 50.0% | |
| CTTCAGGGACTGCAAAACCT+GGG | + | chr2_3:60327100-60327119 | Msa0303160:CDS | 50.0% | |
| TTCAGGGACTGCAAAACCTG+GGG | + | chr2_3:60327101-60327120 | Msa0303160:CDS | 50.0% | |
| GACAGCTGCACTTCTATCAG+CGG | - | chr2_3:60327139-60327158 | None:intergenic | 50.0% | |
| ! | GTTCCATAGTTCTGCTCCCA+TGG | - | chr2_3:60327198-60327217 | None:intergenic | 50.0% |
| GGAACTAACAGCTATGGAGG+CGG | + | chr2_3:60327213-60327232 | Msa0303160:CDS | 50.0% | |
| CTAGGAGGAGGAATGTATGG+CGG | + | chr2_3:60327422-60327441 | Msa0303160:CDS | 50.0% | |
| TACAGCAGAGGAGGATATGG+AGG | + | chr2_3:60327470-60327489 | Msa0303160:intron | 50.0% | |
| ACATCCCAGATGACCCGTAA+AGG | - | chr2_3:60327499-60327518 | None:intergenic | 50.0% | |
| ! | TACGGGTCATCTGGGATGTA+TGG | + | chr2_3:60327500-60327519 | Msa0303160:CDS | 50.0% |
| ! | TCATCTGGGATGTATGGAGG+AGG | + | chr2_3:60327506-60327525 | Msa0303160:CDS | 50.0% |
| ! | ATGGGAGTTGGTCCTTATGG+TGG | + | chr2_3:60327584-60327603 | Msa0303160:CDS | 50.0% |
| GGATCTTGCTCACCACCATA+AGG | - | chr2_3:60327599-60327618 | None:intergenic | 50.0% | |
| ! | GGGGCGCCATATGGATTATT+GGG | - | chr2_3:60327620-60327639 | None:intergenic | 50.0% |
| !! | AGGGGCGCCATATGGATTAT+TGG | - | chr2_3:60327621-60327640 | None:intergenic | 50.0% |
| TTGGATTTCTGTGATGCGCG+TGG | + | chr2_3:60327658-60327677 | Msa0303160:CDS | 50.0% | |
| TCTTGCCTCACATTGCTCAC+AGG | - | chr2_3:60327945-60327964 | None:intergenic | 50.0% | |
| !! | AGAGAAGCAATGGTGGACCA+CGG | - | chr2_3:60328110-60328129 | None:intergenic | 50.0% |
| ACTCATTGACCAGAACACCC+AGG | + | chr2_3:60328282-60328301 | Msa0303160:CDS | 50.0% | |
| AATGGAATGCCTGGGTGTTC+TGG | - | chr2_3:60328294-60328313 | None:intergenic | 50.0% | |
| GCATGGCGGTCATGAACAAA+TGG | - | chr2_3:60328312-60328331 | None:intergenic | 50.0% | |
| TGAAGGCCAAACCTGAAGCA+TGG | - | chr2_3:60328329-60328348 | None:intergenic | 50.0% | |
| GAGCTAGAACGCATCAGAGT+TGG | - | chr2_3:60328569-60328588 | None:intergenic | 50.0% | |
| GAGTTGAATCCCACGAGCTA+GGG | + | chr2_3:60328593-60328612 | Msa0303160:intron | 50.0% | |
| AGTTGAATCCCACGAGCTAG+GGG | + | chr2_3:60328594-60328613 | Msa0303160:intron | 50.0% | |
| !! | GAATTGGTTCGCGGTTCTCA+TGG | - | chr2_3:60328970-60328989 | None:intergenic | 50.0% |
| ! | AGGTCACTTGGACTGGACAT+TGG | - | chr2_3:60329219-60329238 | None:intergenic | 50.0% |
| ATACACAGAGTCGGTACGCT+CGG | - | chr2_3:60329426-60329445 | None:intergenic | 50.0% | |
| CGTTAGGGGATACACAGAGT+CGG | - | chr2_3:60329435-60329454 | None:intergenic | 50.0% | |
| CTGTGTATCCCCTAACGTAC+CGG | + | chr2_3:60329438-60329457 | Msa0303160:intron | 50.0% | |
| ATCGCTCCGGCATGTTGTAT+GGG | + | chr2_3:60330241-60330260 | Msa0303160:CDS | 50.0% | |
| TAGCTCCCCATACAACATGC+CGG | - | chr2_3:60330250-60330269 | None:intergenic | 50.0% | |
| GATTTGTGTTGCGGTTGCTC+GGG | + | chr2_3:60330274-60330293 | Msa0303160:CDS | 50.0% | |
| CCCAATAAGGTTAACCCACC+AGG | + | chr2_3:60330309-60330328 | Msa0303160:CDS | 50.0% | |
| GTTAACCCACCAGGTCCAAA+TGG | + | chr2_3:60330318-60330337 | Msa0303160:CDS | 50.0% | |
| GGATATCCATTTGGACCTGG+TGG | - | chr2_3:60330327-60330346 | None:intergenic | 50.0% | |
| GCCTGATGGTTGTTGAGGGT+TGG | - | chr2_3:60326274-60326293 | None:intergenic | 55.0% | |
| ACCCTCAACAACCATCAGGC+AGG | + | chr2_3:60326274-60326293 | Msa0303160:intron | 55.0% | |
| !! | CGTTCCCAAGGTTTTGGTGG+AGG | - | chr2_3:60327009-60327028 | None:intergenic | 55.0% |
| !! | GCTCGTTCCCAAGGTTTTGG+TGG | - | chr2_3:60327012-60327031 | None:intergenic | 55.0% |
| ! | CCTGCTCGTTCCCAAGGTTT+TGG | - | chr2_3:60327015-60327034 | None:intergenic | 55.0% |
| CCAAAACCTTGGGAACGAGC+AGG | + | chr2_3:60327012-60327031 | Msa0303160:CDS | 55.0% | |
| GAAGAACCTGCTCGTTCCCA+AGG | - | chr2_3:60327021-60327040 | None:intergenic | 55.0% | |
| ! | GATGGCGGTCTAAAAGGTGC+CGG | - | chr2_3:60327051-60327070 | None:intergenic | 55.0% |
| ! | GCACCTTTTAGACCGCCATC+AGG | + | chr2_3:60327051-60327070 | Msa0303160:CDS | 55.0% |
| !! | CCACCTGATGGCGGTCTAAA+AGG | - | chr2_3:60327057-60327076 | None:intergenic | 55.0% |
| ! | CCTTTTAGACCGCCATCAGG+TGG | + | chr2_3:60327054-60327073 | Msa0303160:CDS | 55.0% |
| TCACTGGTGCTTCCACCTGA+TGG | - | chr2_3:60327069-60327088 | None:intergenic | 55.0% | |
| GCTTCAGGGACTGCAAAACC+TGG | + | chr2_3:60327099-60327118 | Msa0303160:CDS | 55.0% | |
| GCGGTGGTAACAATTTCCCC+AGG | - | chr2_3:60327120-60327139 | None:intergenic | 55.0% | |
| AGCTGCACTTCTATCAGCGG+TGG | - | chr2_3:60327136-60327155 | None:intergenic | 55.0% | |
| AGGCCATGGGAGCAGAACTA+TGG | + | chr2_3:60327192-60327211 | Msa0303160:CDS | 55.0% | |
| ! | AGCTATGGAGGCGGAGCATT+AGG | + | chr2_3:60327222-60327241 | Msa0303160:CDS | 55.0% |
| ! | TATGGAGGCGGAGCATTAGG+TGG | + | chr2_3:60327225-60327244 | Msa0303160:CDS | 55.0% |
| !! | TCTTCTTATGGTGGCGGGCT+AGG | + | chr2_3:60327404-60327423 | Msa0303160:CDS | 55.0% |
| GGGCTAGGAGGAGGAATGTA+TGG | + | chr2_3:60327419-60327438 | Msa0303160:CDS | 55.0% | |
| AGCAGAGGAGGATATGGAGG+CGG | + | chr2_3:60327473-60327492 | Msa0303160:intron | 55.0% | |
| GGATATGGAGGCGGCCTTTA+CGG | + | chr2_3:60327482-60327501 | Msa0303160:CDS | 55.0% | |
| GATATGGAGGCGGCCTTTAC+GGG | + | chr2_3:60327483-60327502 | Msa0303160:CDS | 55.0% | |
| ! | GGGTCATCTGGGATGTATGG+AGG | + | chr2_3:60327503-60327522 | Msa0303160:CDS | 55.0% |
| ! | TCTGGGATGTATGGAGGAGG+TGG | + | chr2_3:60327509-60327528 | Msa0303160:CDS | 55.0% |
| GTCCAATGGGTGGAATGGGT+GGG | + | chr2_3:60327555-60327574 | Msa0303160:CDS | 55.0% | |
| TACCCACCCATTCCACCCAT+TGG | - | chr2_3:60327560-60327579 | None:intergenic | 55.0% | |
| ATGGGTGGAATGGGTGGGTA+TGG | + | chr2_3:60327560-60327579 | Msa0303160:CDS | 55.0% | |
| TGGAATGGGTGGGTATGGCA+TGG | + | chr2_3:60327565-60327584 | Msa0303160:CDS | 55.0% | |
| GGAATGGGTGGGTATGGCAT+GGG | + | chr2_3:60327566-60327585 | Msa0303160:CDS | 55.0% | |
| ! | GGCATGGGAGTTGGTCCTTA+TGG | + | chr2_3:60327581-60327600 | Msa0303160:CDS | 55.0% |
| AAAATCCTGGCGGGGATGGA+GGG | - | chr2_3:60327640-60327659 | None:intergenic | 55.0% | |
| ATCCAAAATCCTGGCGGGGA+TGG | - | chr2_3:60327644-60327663 | None:intergenic | 55.0% | |
| GTTCATGACCGCCATGCTTC+AGG | + | chr2_3:60328315-60328334 | Msa0303160:CDS | 55.0% | |
| ! | TGACCGCCATGCTTCAGGTT+TGG | + | chr2_3:60328320-60328339 | Msa0303160:intron | 55.0% |
| AGGCCAAACCTGAAGCATGG+CGG | - | chr2_3:60328326-60328345 | None:intergenic | 55.0% | |
| ! | CGAGTTGAATCCCACGAGCT+AGG | + | chr2_3:60328592-60328611 | Msa0303160:intron | 55.0% |
| ACTTGGTTCCCCTAGCTCGT+GGG | - | chr2_3:60328605-60328624 | None:intergenic | 55.0% | |
| !! | GAGTGAAGGTTGGTGGGACT+TGG | - | chr2_3:60328622-60328641 | None:intergenic | 55.0% |
| !! | GGTACGGACGAATTGGTTCG+CGG | - | chr2_3:60328979-60328998 | None:intergenic | 55.0% |
| GCGAACCAATTCGTCCGTAC+CGG | + | chr2_3:60328978-60328997 | Msa0303160:intron | 55.0% | |
| ACGAACCGGTACGGACGAAT+TGG | - | chr2_3:60328986-60329005 | None:intergenic | 55.0% | |
| AAAAGGTGAACCAGTGGCGG+TGG | + | chr2_3:60329030-60329049 | Msa0303160:intron | 55.0% | |
| TGAAGCTTTACCACCGCCAC+TGG | - | chr2_3:60329043-60329062 | None:intergenic | 55.0% | |
| TACACAGAGTCGGTACGCTC+GGG | - | chr2_3:60329425-60329444 | None:intergenic | 55.0% | |
| ! | ATGGAACGGGTTCCCAGTGT+TGG | - | chr2_3:60330148-60330167 | None:intergenic | 55.0% |
| CTGCAGCTGTTTGATCGCTC+CGG | + | chr2_3:60330228-60330247 | Msa0303160:intron | 55.0% | |
| GATCGCTCCGGCATGTTGTA+TGG | + | chr2_3:60330240-60330259 | Msa0303160:CDS | 55.0% | |
| TCGCTCCGGCATGTTGTATG+GGG | + | chr2_3:60330242-60330261 | Msa0303160:CDS | 55.0% | |
| GAACCACTTGGAGCAGCCTT+TGG | - | chr2_3:60330423-60330442 | None:intergenic | 55.0% | |
| AGGCTGCTCCAAGTGGTTCT+TGG | + | chr2_3:60330424-60330443 | Msa0303160:CDS | 55.0% | |
| GGCTGCTCCAAGTGGTTCTT+GGG | + | chr2_3:60330425-60330444 | Msa0303160:CDS | 55.0% | |
| CTGGTGCTTCCACCTGATGG+CGG | - | chr2_3:60327066-60327085 | None:intergenic | 60.0% | |
| ! | TTCTGCTCCCATGGCCTTGC+GGG | - | chr2_3:60327189-60327208 | None:intergenic | 60.0% |
| ! | GTTCTGCTCCCATGGCCTTG+CGG | - | chr2_3:60327190-60327209 | None:intergenic | 60.0% |
| !! | TCTTATGGTGGCGGGCTAGG+AGG | + | chr2_3:60327407-60327426 | Msa0303160:CDS | 60.0% |
| GGAGGAGGAATGTATGGCGG+CGG | + | chr2_3:60327425-60327444 | Msa0303160:CDS | 60.0% | |
| GAGGAATGTATGGCGGCGGT+GGG | + | chr2_3:60327429-60327448 | Msa0303160:CDS | 60.0% | |
| TATGGCGGCGGTGGGATGTA+TGG | + | chr2_3:60327437-60327456 | Msa0303160:intron | 60.0% | |
| GCGGCCTTTACGGGTCATCT+GGG | + | chr2_3:60327492-60327511 | Msa0303160:CDS | 60.0% | |
| ! | TAGTGGCCTTGGGGGTCCAA+TGG | + | chr2_3:60327541-60327560 | Msa0303160:CDS | 60.0% |
| ! | AGTGGCCTTGGGGGTCCAAT+GGG | + | chr2_3:60327542-60327561 | Msa0303160:CDS | 60.0% |
| TTCCACCCATTGGACCCCCA+AGG | - | chr2_3:60327550-60327569 | None:intergenic | 60.0% | |
| TGGGGGTCCAATGGGTGGAA+TGG | + | chr2_3:60327550-60327569 | Msa0303160:CDS | 60.0% | |
| GGGGGTCCAATGGGTGGAAT+GGG | + | chr2_3:60327551-60327570 | Msa0303160:CDS | 60.0% | |
| GGTCCAATGGGTGGAATGGG+TGG | + | chr2_3:60327554-60327573 | Msa0303160:CDS | 60.0% | |
| GGTGGGTATGGCATGGGAGT+TGG | + | chr2_3:60327572-60327591 | Msa0303160:CDS | 60.0% | |
| AAATCCTGGCGGGGATGGAG+GGG | - | chr2_3:60327639-60327658 | None:intergenic | 60.0% | |
| CAAAATCCTGGCGGGGATGG+AGG | - | chr2_3:60327641-60327660 | None:intergenic | 60.0% | |
| ! | CTCCATCCCCGCCAGGATTT+TGG | + | chr2_3:60327639-60327658 | Msa0303160:CDS | 60.0% |
| ! | GACTTGGTTCCCCTAGCTCG+TGG | - | chr2_3:60328606-60328625 | None:intergenic | 60.0% |
| TGGTTCGCGGTTCTCATGGG+TGG | - | chr2_3:60328966-60328985 | None:intergenic | 60.0% | |
| TTCGCGATTCGCTCGGTACG+CGG | - | chr2_3:60329503-60329522 | None:intergenic | 60.0% | |
| TACCGAGCGAATCGCGAACC+TGG | + | chr2_3:60329505-60329524 | Msa0303160:intron | 60.0% | |
| CACCAGGTTCGCGATTCGCT+CGG | - | chr2_3:60329510-60329529 | None:intergenic | 60.0% | |
| GCACCAAAGGCTGCTCCAAG+TGG | + | chr2_3:60330417-60330436 | Msa0303160:CDS | 60.0% | |
| TTGCCAGGCCTGTTCCCGCA+AGG | + | chr2_3:60327172-60327191 | Msa0303160:CDS | 65.0% | |
| GCCTGTTCCCGCAAGGCCAT+GGG | + | chr2_3:60327179-60327198 | Msa0303160:CDS | 65.0% | |
| ! | TCCCATGGCCTTGCGGGAAC+AGG | - | chr2_3:60327183-60327202 | None:intergenic | 65.0% |
| !! | TATGGTGGCGGGCTAGGAGG+AGG | + | chr2_3:60327410-60327429 | Msa0303160:CDS | 65.0% |
| GGAGGAATGTATGGCGGCGG+TGG | + | chr2_3:60327428-60327447 | Msa0303160:CDS | 65.0% | |
| GGCGGCCTTTACGGGTCATC+TGG | + | chr2_3:60327491-60327510 | Msa0303160:CDS | 65.0% | |
| CGGTACGAACACGCGGTACG+CGG | - | chr2_3:60329483-60329502 | None:intergenic | 65.0% | |
| CGGTACGCGGTACGAACACG+CGG | - | chr2_3:60329490-60329509 | None:intergenic | 65.0% | |
| ! | TGGCCTTGCGGGAACAGGCC+TGG | - | chr2_3:60327178-60327197 | None:intergenic | 70.0% |
| GGCCTGTTCCCGCAAGGCCA+TGG | + | chr2_3:60327178-60327197 | Msa0303160:CDS | 70.0% | |
| GGCCTTGGGGGTCCAATGGG+TGG | + | chr2_3:60327545-60327564 | Msa0303160:CDS | 70.0% | |
| !! | GGGGATGGAGGGGCGCCATA+TGG | - | chr2_3:60327629-60327648 | None:intergenic | 70.0% |
| ! | GGCGCCCCTCCATCCCCGCC+AGG | + | chr2_3:60327632-60327651 | Msa0303160:CDS | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 60326008 | 60330903 | 60326008 | ID=Msa0303160;Name=Msa0303160 |
| chr2_3 | mRNA | 60326008 | 60330903 | 60326008 | ID=Msa0303160-mRNA-1;Parent=Msa0303160;Name=Msa0303160-mRNA-1;_AED=0.06;_eAED=0.06;_QI=256|0.8|0.66|1|0.6|0.66|6|424|307 |
| chr2_3 | exon | 60326008 | 60326291 | 60326008 | ID=Msa0303160-mRNA-1:exon:19644;Parent=Msa0303160-mRNA-1 |
| chr2_3 | exon | 60326998 | 60327246 | 60326998 | ID=Msa0303160-mRNA-1:exon:19645;Parent=Msa0303160-mRNA-1 |
| chr2_3 | exon | 60327351 | 60327453 | 60327351 | ID=Msa0303160-mRNA-1:exon:19646;Parent=Msa0303160-mRNA-1 |
| chr2_3 | exon | 60327475 | 60327679 | 60327475 | ID=Msa0303160-mRNA-1:exon:19647;Parent=Msa0303160-mRNA-1 |
| chr2_3 | exon | 60328244 | 60328336 | 60328244 | ID=Msa0303160-mRNA-1:exon:19648;Parent=Msa0303160-mRNA-1 |
| chr2_3 | exon | 60330234 | 60330903 | 60330234 | ID=Msa0303160-mRNA-1:exon:19649;Parent=Msa0303160-mRNA-1 |
| chr2_3 | five_prime_UTR | 60326008 | 60326263 | 60326008 | ID=Msa0303160-mRNA-1:five_prime_utr;Parent=Msa0303160-mRNA-1 |
| chr2_3 | CDS | 60326264 | 60326291 | 60326264 | ID=Msa0303160-mRNA-1:cds;Parent=Msa0303160-mRNA-1 |
| chr2_3 | CDS | 60326998 | 60327246 | 60326998 | ID=Msa0303160-mRNA-1:cds;Parent=Msa0303160-mRNA-1 |
| chr2_3 | CDS | 60327351 | 60327453 | 60327351 | ID=Msa0303160-mRNA-1:cds;Parent=Msa0303160-mRNA-1 |
| chr2_3 | CDS | 60327475 | 60327679 | 60327475 | ID=Msa0303160-mRNA-1:cds;Parent=Msa0303160-mRNA-1 |
| chr2_3 | CDS | 60328244 | 60328336 | 60328244 | ID=Msa0303160-mRNA-1:cds;Parent=Msa0303160-mRNA-1 |
| chr2_3 | CDS | 60330234 | 60330479 | 60330234 | ID=Msa0303160-mRNA-1:cds;Parent=Msa0303160-mRNA-1 |
| chr2_3 | three_prime_UTR | 60330480 | 60330903 | 60330480 | ID=Msa0303160-mRNA-1:three_prime_utr;Parent=Msa0303160-mRNA-1 |
| Gene Sequence |
| Protein sequence |
